Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56018.t1 | XP_003594790.3 | 96.8 | 914 | 29 | 0 | 1 | 914 | 1 | 914 | 0.00E+00 | 1680.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56018.t1 | O23463 | 59.2 | 919 | 342 | 12 | 8 | 902 | 6 | 915 | 7.4e-273 | 941.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56018.t1 | A0A396JD54 | 96.8 | 914 | 29 | 0 | 1 | 914 | 1 | 914 | 0.0e+00 | 1680.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene56018.t1 | TF | CAMTA |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene56018 | 0.831472 | 1.64E-55 | -1.69E-46 |
MS.gene049151 | MS.gene56018 | 0.840366 | 9.08E-58 | -1.69E-46 |
MS.gene049153 | MS.gene56018 | 0.830506 | 2.83E-55 | -1.69E-46 |
MS.gene049378 | MS.gene56018 | 0.81304 | 3.13E-51 | -1.69E-46 |
MS.gene050139 | MS.gene56018 | 0.811161 | 8.04E-51 | -1.69E-46 |
MS.gene050168 | MS.gene56018 | 0.804345 | 2.26E-49 | -1.69E-46 |
MS.gene050226 | MS.gene56018 | 0.847447 | 1.15E-59 | -1.69E-46 |
MS.gene050227 | MS.gene56018 | 0.843245 | 1.58E-58 | -1.69E-46 |
MS.gene050228 | MS.gene56018 | 0.840426 | 8.76E-58 | -1.69E-46 |
MS.gene050442 | MS.gene56018 | 0.830371 | 3.05E-55 | -1.69E-46 |
MS.gene050623 | MS.gene56018 | -0.826293 | 2.94E-54 | -1.69E-46 |
MS.gene050680 | MS.gene56018 | 0.800689 | 1.28E-48 | -1.69E-46 |
MS.gene050719 | MS.gene56018 | 0.808802 | 2.59E-50 | -1.69E-46 |
MS.gene050721 | MS.gene56018 | 0.804246 | 2.37E-49 | -1.69E-46 |
MS.gene050762 | MS.gene56018 | 0.800892 | 1.16E-48 | -1.69E-46 |
MS.gene050763 | MS.gene56018 | 0.80178 | 7.66E-49 | -1.69E-46 |
MS.gene050780 | MS.gene56018 | 0.803171 | 3.96E-49 | -1.69E-46 |
MS.gene050820 | MS.gene56018 | 0.803207 | 3.89E-49 | -1.69E-46 |
MS.gene051860 | MS.gene56018 | 0.834312 | 3.22E-56 | -1.69E-46 |
MS.gene051983 | MS.gene56018 | 0.829434 | 5.16E-55 | -1.69E-46 |
MS.gene052333 | MS.gene56018 | 0.821162 | 4.67E-53 | -1.69E-46 |
MS.gene053494 | MS.gene56018 | 0.813111 | 3.02E-51 | -1.69E-46 |
MS.gene053555 | MS.gene56018 | 0.801003 | 1.11E-48 | -1.69E-46 |
MS.gene053811 | MS.gene56018 | 0.803404 | 3.54E-49 | -1.69E-46 |
MS.gene053836 | MS.gene56018 | 0.806007 | 1.01E-49 | -1.69E-46 |
MS.gene054183 | MS.gene56018 | 0.830557 | 2.75E-55 | -1.69E-46 |
MS.gene054184 | MS.gene56018 | 0.800409 | 1.46E-48 | -1.69E-46 |
MS.gene054185 | MS.gene56018 | 0.804503 | 2.09E-49 | -1.69E-46 |
MS.gene054379 | MS.gene56018 | 0.800395 | 1.47E-48 | -1.69E-46 |
MS.gene054468 | MS.gene56018 | 0.824071 | 9.84E-54 | -1.69E-46 |
MS.gene054542 | MS.gene56018 | 0.80614 | 9.50E-50 | -1.69E-46 |
MS.gene054930 | MS.gene56018 | 0.817843 | 2.67E-52 | -1.69E-46 |
MS.gene054983 | MS.gene56018 | 0.806261 | 8.96E-50 | -1.69E-46 |
MS.gene05510 | MS.gene56018 | 0.819268 | 1.27E-52 | -1.69E-46 |
MS.gene055358 | MS.gene56018 | 0.81224 | 4.68E-51 | -1.69E-46 |
MS.gene055604 | MS.gene56018 | 0.804771 | 1.84E-49 | -1.69E-46 |
MS.gene055701 | MS.gene56018 | 0.844617 | 6.77E-59 | -1.69E-46 |
MS.gene056723 | MS.gene56018 | 0.814686 | 1.36E-51 | -1.69E-46 |
MS.gene056979 | MS.gene56018 | 0.81241 | 4.30E-51 | -1.69E-46 |
MS.gene057394 | MS.gene56018 | 0.81718 | 3.77E-52 | -1.69E-46 |
MS.gene057469 | MS.gene56018 | 0.800682 | 1.29E-48 | -1.69E-46 |
MS.gene05761 | MS.gene56018 | 0.817223 | 3.69E-52 | -1.69E-46 |
MS.gene057750 | MS.gene56018 | 0.804628 | 1.97E-49 | -1.69E-46 |
MS.gene058146 | MS.gene56018 | 0.811004 | 8.70E-51 | -1.69E-46 |
MS.gene059161 | MS.gene56018 | 0.815506 | 8.93E-52 | -1.69E-46 |
MS.gene059609 | MS.gene56018 | 0.842028 | 3.32E-58 | -1.69E-46 |
MS.gene060084 | MS.gene56018 | 0.8052 | 1.50E-49 | -1.69E-46 |
MS.gene060802 | MS.gene56018 | 0.800083 | 1.70E-48 | -1.69E-46 |
MS.gene060803 | MS.gene56018 | 0.82404 | 1.00E-53 | -1.69E-46 |
MS.gene060998 | MS.gene56018 | 0.812785 | 3.56E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56018.t1 | MTR_2g034650 | 96.824 | 913 | 29 | 0 | 2 | 914 | 1 | 913 | 0.0 | 1858 |
MS.gene56018.t1 | MTR_4g121840 | 70.793 | 921 | 256 | 3 | 1 | 909 | 1 | 920 | 0.0 | 1335 |
MS.gene56018.t1 | MTR_4g121840 | 70.070 | 862 | 245 | 3 | 60 | 909 | 30 | 890 | 0.0 | 1226 |
MS.gene56018.t1 | MTR_8g080800 | 36.395 | 588 | 316 | 17 | 356 | 910 | 399 | 961 | 4.58e-89 | 305 |
MS.gene56018.t1 | MTR_8g080800 | 48.344 | 151 | 76 | 1 | 24 | 172 | 6 | 156 | 1.37e-39 | 159 |
MS.gene56018.t1 | MTR_8g090205 | 32.367 | 621 | 371 | 15 | 299 | 886 | 276 | 880 | 9.38e-88 | 300 |
MS.gene56018.t1 | MTR_8g090205 | 32.367 | 621 | 371 | 15 | 299 | 886 | 276 | 880 | 1.14e-87 | 300 |
MS.gene56018.t1 | MTR_8g090205 | 31.761 | 636 | 396 | 13 | 277 | 886 | 414 | 1037 | 9.48e-87 | 300 |
MS.gene56018.t1 | MTR_8g090205 | 47.953 | 171 | 80 | 2 | 25 | 186 | 9 | 179 | 2.76e-42 | 167 |
MS.gene56018.t1 | MTR_8g090205 | 32.193 | 643 | 384 | 16 | 277 | 886 | 416 | 1039 | 1.46e-86 | 299 |
MS.gene56018.t1 | MTR_8g090205 | 48.235 | 170 | 79 | 2 | 26 | 186 | 12 | 181 | 3.22e-42 | 167 |
MS.gene56018.t1 | MTR_8g090205 | 32.367 | 621 | 371 | 15 | 299 | 886 | 433 | 1037 | 1.48e-86 | 300 |
MS.gene56018.t1 | MTR_8g090205 | 47.953 | 171 | 80 | 2 | 25 | 186 | 9 | 179 | 3.17e-42 | 167 |
MS.gene56018.t1 | MTR_8g090205 | 32.193 | 643 | 384 | 16 | 277 | 886 | 416 | 1039 | 1.49e-86 | 300 |
MS.gene56018.t1 | MTR_8g090205 | 48.235 | 170 | 79 | 2 | 26 | 186 | 12 | 181 | 3.32e-42 | 167 |
MS.gene56018.t1 | MTR_2g008840 | 32.143 | 616 | 371 | 13 | 301 | 886 | 355 | 953 | 1.57e-83 | 290 |
MS.gene56018.t1 | MTR_2g008840 | 55.652 | 115 | 49 | 2 | 54 | 168 | 2 | 114 | 3.76e-30 | 129 |
MS.gene56018.t1 | MTR_2g008840 | 32.143 | 616 | 371 | 13 | 301 | 886 | 395 | 993 | 3.35e-83 | 290 |
MS.gene56018.t1 | MTR_2g008840 | 54.861 | 144 | 63 | 2 | 25 | 168 | 13 | 154 | 3.06e-39 | 158 |
MS.gene56018.t1 | MTR_4g094215 | 30.269 | 707 | 430 | 19 | 215 | 886 | 303 | 981 | 1.73e-79 | 279 |
MS.gene56018.t1 | MTR_4g094215 | 55.039 | 129 | 58 | 0 | 25 | 153 | 13 | 141 | 2.90e-38 | 155 |
MS.gene56018.t1 | MTR_4g094215 | 30.269 | 707 | 430 | 19 | 215 | 886 | 303 | 981 | 1.95e-79 | 279 |
MS.gene56018.t1 | MTR_4g094215 | 55.039 | 129 | 58 | 0 | 25 | 153 | 13 | 141 | 3.01e-38 | 155 |
MS.gene56018.t1 | MTR_3g085050 | 32.323 | 594 | 344 | 15 | 340 | 908 | 375 | 935 | 2.96e-72 | 257 |
MS.gene56018.t1 | MTR_3g085050 | 54.135 | 133 | 59 | 1 | 26 | 156 | 8 | 140 | 1.96e-39 | 158 |
MS.gene56018.t1 | MTR_3g085050 | 32.804 | 567 | 328 | 14 | 340 | 886 | 375 | 908 | 5.77e-72 | 256 |
MS.gene56018.t1 | MTR_3g085050 | 54.135 | 133 | 59 | 1 | 26 | 156 | 8 | 140 | 1.68e-39 | 158 |
MS.gene56018.t1 | MTR_8g090205 | 30.459 | 545 | 330 | 15 | 277 | 791 | 416 | 941 | 7.30e-59 | 218 |
MS.gene56018.t1 | MTR_8g090205 | 48.235 | 170 | 79 | 2 | 26 | 186 | 12 | 181 | 2.90e-42 | 167 |
MS.gene56018.t1 | MTR_2g008840 | 30.174 | 517 | 320 | 11 | 301 | 791 | 395 | 896 | 1.94e-55 | 207 |
MS.gene56018.t1 | MTR_2g008840 | 54.861 | 144 | 63 | 2 | 25 | 168 | 13 | 154 | 2.08e-39 | 158 |
MS.gene56018.t1 | MTR_4g094215 | 28.336 | 607 | 379 | 17 | 215 | 791 | 303 | 883 | 5.55e-52 | 197 |
MS.gene56018.t1 | MTR_4g094215 | 55.039 | 129 | 58 | 0 | 25 | 153 | 13 | 141 | 2.13e-38 | 155 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56018.t1 | AT3G16940 | 56.517 | 890 | 327 | 10 | 9 | 896 | 7 | 838 | 0.0 | 977 |
MS.gene56018.t1 | AT3G16940 | 56.106 | 868 | 321 | 10 | 31 | 896 | 2 | 811 | 0.0 | 941 |
MS.gene56018.t1 | AT3G16940 | 54.904 | 785 | 299 | 9 | 9 | 791 | 7 | 738 | 0.0 | 827 |
MS.gene56018.t1 | AT5G09410 | 31.325 | 996 | 534 | 28 | 25 | 910 | 16 | 971 | 1.46e-131 | 420 |
MS.gene56018.t1 | AT5G09410 | 30.168 | 1011 | 544 | 27 | 25 | 910 | 75 | 1048 | 2.68e-121 | 394 |
MS.gene56018.t1 | AT2G22300 | 34.466 | 618 | 347 | 16 | 299 | 886 | 331 | 920 | 5.66e-88 | 302 |
MS.gene56018.t1 | AT2G22300 | 66.265 | 83 | 28 | 0 | 71 | 153 | 1 | 83 | 8.09e-29 | 124 |
MS.gene56018.t1 | AT2G22300 | 34.304 | 618 | 348 | 16 | 299 | 886 | 389 | 978 | 1.80e-87 | 301 |
MS.gene56018.t1 | AT2G22300 | 58.571 | 140 | 58 | 0 | 14 | 153 | 2 | 141 | 1.19e-45 | 178 |
MS.gene56018.t1 | AT2G22300 | 34.304 | 618 | 348 | 16 | 299 | 886 | 389 | 978 | 1.80e-87 | 301 |
MS.gene56018.t1 | AT2G22300 | 58.571 | 140 | 58 | 0 | 14 | 153 | 2 | 141 | 1.19e-45 | 178 |
MS.gene56018.t1 | AT5G64220 | 31.553 | 618 | 348 | 13 | 302 | 886 | 423 | 998 | 5.39e-84 | 292 |
MS.gene56018.t1 | AT5G64220 | 50.276 | 181 | 78 | 2 | 25 | 193 | 13 | 193 | 8.39e-45 | 176 |
MS.gene56018.t1 | AT5G64220 | 31.553 | 618 | 348 | 13 | 302 | 886 | 423 | 998 | 5.39e-84 | 292 |
MS.gene56018.t1 | AT5G64220 | 50.276 | 181 | 78 | 2 | 25 | 193 | 13 | 193 | 8.39e-45 | 176 |
MS.gene56018.t1 | AT5G09410 | 30.448 | 647 | 381 | 15 | 302 | 910 | 253 | 868 | 3.99e-80 | 278 |
MS.gene56018.t1 | AT5G09410 | 30.448 | 647 | 381 | 15 | 302 | 910 | 374 | 989 | 2.25e-79 | 278 |
MS.gene56018.t1 | AT5G09410 | 48.555 | 173 | 72 | 2 | 25 | 183 | 16 | 185 | 6.83e-42 | 166 |
MS.gene56018.t1 | AT1G67310 | 35.121 | 578 | 327 | 15 | 357 | 908 | 444 | 999 | 1.43e-70 | 253 |
MS.gene56018.t1 | AT1G67310 | 46.324 | 136 | 73 | 0 | 21 | 156 | 32 | 167 | 4.25e-35 | 145 |
Find 186 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAGATTTCCGCGACAAATT+TGG | 0.190217 | 2.3:+56214744 | MS.gene56018:CDS |
AATCATTCTATAAATCTTAT+TGG | 0.192226 | 2.3:+56213709 | MS.gene56018:CDS |
GGACTCGCATTTGAATTTAA+TGG | 0.227685 | 2.3:-56212807 | None:intergenic |
CATGAAGTGTATAAAACTTT+TGG | 0.232830 | 2.3:-56214505 | None:intergenic |
AAATTAACAACTTGGCTAAT+AGG | 0.235743 | 2.3:-56214285 | None:intergenic |
CTATCAGAAGACTTGGATTC+TGG | 0.246247 | 2.3:+56212858 | MS.gene56018:CDS |
CAAACTCAGGGAATGGCTTT+TGG | 0.255377 | 2.3:+56214599 | MS.gene56018:CDS |
TTCTTGCAGGTCCTGGTAAC+TGG | 0.267829 | 2.3:+56214096 | MS.gene56018:intron |
AAGCTTCTGTTCATGACTTC+TGG | 0.279096 | 2.3:-56213229 | None:intergenic |
AGTTGGATCTGTCACCAAAT+TGG | 0.280566 | 2.3:-56215447 | None:intergenic |
GCCACAGACACACATTATAT+TGG | 0.281294 | 2.3:-56214154 | None:intergenic |
GTAAGGTTCTCAGCATTTAC+TGG | 0.282291 | 2.3:-56215629 | None:intergenic |
CTGGATCATTTGTAGTGGTT+TGG | 0.306285 | 2.3:-56215610 | None:intergenic |
GGCAATATCGTAAAATTCTA+TGG | 0.307153 | 2.3:+56216069 | MS.gene56018:CDS |
AATTTGTCTTAGGGAGAATA+TGG | 0.308955 | 2.3:+56215394 | MS.gene56018:intron |
GCAGCAGGATCGTGCAAAAT+AGG | 0.312540 | 2.3:-56214321 | None:intergenic |
ATATTTGTAATTGCTGAGTA+TGG | 0.314431 | 2.3:-56211237 | None:intergenic |
CAACTTGGCTAATAGGCTTA+TGG | 0.317255 | 2.3:-56214278 | None:intergenic |
ATGAGCTTAATACACTTGAT+TGG | 0.321779 | 2.3:+56213253 | MS.gene56018:CDS |
ATTCTAACTCCGCCAGAGTC+TGG | 0.324528 | 2.3:+56213637 | MS.gene56018:CDS |
CTTCATTGGGCAGCATATAA+TGG | 0.325901 | 2.3:+56214777 | MS.gene56018:CDS |
TCCATCACCAGTGATGAAAA+TGG | 0.327471 | 2.3:-56213877 | None:intergenic |
TTTGGAAAGAAATAATGTTT+TGG | 0.330089 | 2.3:-56214487 | None:intergenic |
AGGTTGGAGTTTACCGATGC+TGG | 0.332809 | 2.3:+56214205 | MS.gene56018:CDS |
CATGGATTTCACACCTTAAG+AGG | 0.337515 | 2.3:+56210460 | MS.gene56018:CDS |
GGTGCAGTTGTATCAGAAAT+AGG | 0.337957 | 2.3:-56212828 | None:intergenic |
TCGATGCAGGCTGCATTTAG+AGG | 0.340503 | 2.3:+56216032 | MS.gene56018:intron |
AATACCCCTACTATACAAAA+TGG | 0.347537 | 2.3:+56213300 | MS.gene56018:CDS |
ATCTGGCGTGCTTCCTCCTC+TGG | 0.351586 | 2.3:-56215782 | None:intergenic |
CACGCATACAAGCAGCGTTT+AGG | 0.356504 | 2.3:+56215714 | MS.gene56018:CDS |
TTGGATGGACAGCTCTTCAT+TGG | 0.360303 | 2.3:+56214763 | MS.gene56018:CDS |
TTGCAAAGTCAGAATAGCTT+TGG | 0.360951 | 2.3:+56213766 | MS.gene56018:CDS |
TCCGAAAAGATGGGCACAAC+TGG | 0.365542 | 2.3:+56211766 | MS.gene56018:CDS |
GTTGGATCTGTCACCAAATT+GGG | 0.373235 | 2.3:-56215446 | None:intergenic |
TTTGATCGTTAACACTTTCT+GGG | 0.382927 | 2.3:-56213684 | None:intergenic |
TGTTCCTGTAGAAATTGTTC+AGG | 0.386765 | 2.3:+56214185 | MS.gene56018:CDS |
ACGCATACAAGCAGCGTTTA+GGG | 0.390302 | 2.3:+56215715 | MS.gene56018:CDS |
TTTGAATTTAATGGTGTAAC+GGG | 0.392292 | 2.3:-56212798 | None:intergenic |
ATGCATTGTACTACCTCTTA+AGG | 0.396589 | 2.3:-56210473 | None:intergenic |
GCTTTGTTCGAAGATGTTAT+TGG | 0.400349 | 2.3:+56212100 | MS.gene56018:CDS |
GTAATATGAAATACTTGTTC+CGG | 0.401537 | 2.3:-56213919 | None:intergenic |
TCCAGTACAGATTCCGTTCA+TGG | 0.405822 | 2.3:+56215879 | MS.gene56018:CDS |
AGAGGACCAAGTGTACTTAA+AGG | 0.409759 | 2.3:+56215652 | MS.gene56018:CDS |
TAATCAACAATCTTCTCTTC+CGG | 0.411008 | 2.3:+56213900 | MS.gene56018:CDS |
TTAGTCTCTTTCAATGTAGT+AGG | 0.412230 | 2.3:-56214453 | None:intergenic |
TTCAATGACATGAGCTTAGC+TGG | 0.412581 | 2.3:+56215569 | MS.gene56018:CDS |
GCACGATCCTGCTGCTTCAA+TGG | 0.413164 | 2.3:+56214329 | MS.gene56018:CDS |
GAACAAAGCCTGGGTTATCT+TGG | 0.413976 | 2.3:-56212086 | None:intergenic |
CGTAAAATTCTATGGTCTGT+TGG | 0.422461 | 2.3:+56216077 | MS.gene56018:CDS |
TGAGCTTAATACACTTGATT+GGG | 0.422562 | 2.3:+56213254 | MS.gene56018:CDS |
AGTACACTTGGTCCTCTGTA+AGG | 0.423640 | 2.3:-56215646 | None:intergenic |
TTGTGGAGCAAAGCCCAATT+TGG | 0.424453 | 2.3:+56215433 | MS.gene56018:CDS |
CTGCTGCCTCGGCTGTTGTC+CGG | 0.435310 | 2.3:-56215691 | None:intergenic |
TAACATCTTCGAACAAAGCC+TGG | 0.436408 | 2.3:-56212096 | None:intergenic |
CTTAGGAACTTCCGAAAAGA+TGG | 0.440286 | 2.3:+56211756 | MS.gene56018:CDS |
AGGATACATTGGCAGCTTAC+CGG | 0.443232 | 2.3:+56215672 | MS.gene56018:CDS |
TGGGTATTGCCGCATTCTCC+TGG | 0.445050 | 2.3:+56214225 | MS.gene56018:CDS |
AGTACAGCCACCAGGGTATT+CGG | 0.445573 | 2.3:-56215471 | None:intergenic |
TTGAATTTCGTCTTCAAATG+AGG | 0.446176 | 2.3:+56214370 | MS.gene56018:CDS |
CCGTGGGCTTGAGGTGAATC+CGG | 0.447115 | 2.3:+56216148 | MS.gene56018:CDS |
AAGCGCAACAAGAGTATAGC+AGG | 0.448397 | 2.3:+56216300 | MS.gene56018:CDS |
CACACAAATGAATTACACTT+TGG | 0.449905 | 2.3:-56214668 | None:intergenic |
TCATCTTTCATGTCTTCGTC+CGG | 0.452729 | 2.3:-56216167 | None:intergenic |
TTCTAACTCCGCCAGAGTCT+GGG | 0.453587 | 2.3:+56213638 | MS.gene56018:CDS |
AACTTCACAGGACAACTTGT+TGG | 0.453778 | 2.3:+56210427 | MS.gene56018:CDS |
TACTGAGGTGGCCCCTTCGT+GGG | 0.453889 | 2.3:+56213939 | MS.gene56018:CDS |
AATTCATTTGTGTGCAATGT+TGG | 0.456072 | 2.3:+56214677 | MS.gene56018:CDS |
CTTGTTGGTTCAGAGATACA+TGG | 0.458788 | 2.3:+56210442 | MS.gene56018:CDS |
TTACTGAGGTGGCCCCTTCG+TGG | 0.464196 | 2.3:+56213938 | MS.gene56018:CDS |
CCAGGGTTTCGCCGACATCC+AGG | 0.464964 | 2.3:-56211172 | None:intergenic |
GTTTCTCCACATGCGACGTC+AGG | 0.466290 | 2.3:+56215916 | MS.gene56018:CDS |
AGAACATGGTGTGTAAGATA+TGG | 0.466489 | 2.3:-56213806 | None:intergenic |
TTATCTTTCAGAAAAGTGTC+TGG | 0.473332 | 2.3:+56215538 | MS.gene56018:CDS |
GTGCAATGTTGGGATATACT+TGG | 0.476598 | 2.3:+56214688 | MS.gene56018:CDS |
TTGTATGCGTGCTGCTGCCT+CGG | 0.476655 | 2.3:-56215702 | None:intergenic |
TATTTGACCGCAAGATGCTT+AGG | 0.477000 | 2.3:+56211739 | MS.gene56018:CDS |
TCCATGAACGGAATCTGTAC+TGG | 0.477269 | 2.3:-56215880 | None:intergenic |
CAATGGAGGAGACATACAAC+TGG | 0.483109 | 2.3:+56214346 | MS.gene56018:CDS |
CCACCAGGGTATTCGGTAGT+TGG | 0.483552 | 2.3:-56215464 | None:intergenic |
CGCTTTCTTAGAACGGAACA+TGG | 0.484609 | 2.3:-56216282 | None:intergenic |
AAATAGAGATTCACGAATCC+AGG | 0.491400 | 2.3:-56214243 | None:intergenic |
CCTGTAGAAATTGTTCAGGT+TGG | 0.492274 | 2.3:+56214189 | MS.gene56018:CDS |
GAGAAAACATCAAGGGTCTT+CGG | 0.497702 | 2.3:-56214417 | None:intergenic |
TCCTCAGAAATTCCTACGTA+TGG | 0.499293 | 2.3:+56213613 | MS.gene56018:CDS |
GAAGAGGACTTCTTTAAGAC+TGG | 0.502934 | 2.3:+56216209 | MS.gene56018:CDS |
GGTTGGAGTTTACCGATGCT+GGG | 0.508816 | 2.3:+56214206 | MS.gene56018:CDS |
CCTGGATGTCGGCGAAACCC+TGG | 0.509259 | 2.3:+56211172 | MS.gene56018:CDS |
AAGCAATGGCAGCCGCTGCT+CGG | 0.509734 | 2.3:+56215855 | MS.gene56018:CDS |
TGGATGGACAGCTCTTCATT+GGG | 0.509818 | 2.3:+56214764 | MS.gene56018:CDS |
ATTCATTTGTGTGCAATGTT+GGG | 0.510037 | 2.3:+56214678 | MS.gene56018:CDS |
GTCTCCTCCATTGAAGCAGC+AGG | 0.510767 | 2.3:-56214336 | None:intergenic |
AAAAGGTTTCCGTGGGCTTG+AGG | 0.516403 | 2.3:+56216139 | MS.gene56018:CDS |
ACATTACTGCTCCCAGACTC+TGG | 0.516774 | 2.3:-56213649 | None:intergenic |
ACCATTCGTATAAGCACTGC+TGG | 0.516953 | 2.3:-56212883 | None:intergenic |
ACATTATATTGGACTTTGCA+AGG | 0.517791 | 2.3:-56214143 | None:intergenic |
ATGGATTCTATCAGAAGACT+TGG | 0.519452 | 2.3:+56212851 | MS.gene56018:CDS |
AATCTCTATTTGAGCTTCGA+TGG | 0.522019 | 2.3:+56214255 | MS.gene56018:CDS |
AGACATGAAAGATGAGAAGC+AGG | 0.524871 | 2.3:+56216175 | MS.gene56018:CDS |
ATTTGAATTTAATGGTGTAA+CGG | 0.525522 | 2.3:-56212799 | None:intergenic |
GTTGCTACGTTGTTGTCTTG+TGG | 0.526879 | 2.3:+56215416 | MS.gene56018:CDS |
CCAACCTGAACAATTTCTAC+AGG | 0.529057 | 2.3:-56214189 | None:intergenic |
GATATTCAAAATTAACAACT+TGG | 0.530058 | 2.3:-56214293 | None:intergenic |
TCAGCAGCAGTACAGCCACC+AGG | 0.531177 | 2.3:-56215479 | None:intergenic |
AGGACTTCTTTAAGACTGGT+AGG | 0.538366 | 2.3:+56216213 | MS.gene56018:CDS |
CTTGTTGCGCTTTCTTAGAA+CGG | 0.539892 | 2.3:-56216289 | None:intergenic |
ACATTGTCAAAGCTGCCATT+CGG | 0.542413 | 2.3:-56213446 | None:intergenic |
GCTGATCTTGCTTATATGAA+AGG | 0.543937 | 2.3:+56215497 | MS.gene56018:CDS |
TTTCAACGCAATTTCGAACA+AGG | 0.546511 | 2.3:-56214574 | None:intergenic |
AGTATGGCGTGAATCTCATT+CGG | 0.549858 | 2.3:-56211221 | None:intergenic |
AAGTCTTCTGATAGAATCCA+TGG | 0.551451 | 2.3:-56212849 | None:intergenic |
TTGAGAAAGTAATCCTGCGT+TGG | 0.551923 | 2.3:+56216105 | MS.gene56018:CDS |
TCTTGTCTCAAAGTTGCGAA+AGG | 0.552815 | 2.3:-56215831 | None:intergenic |
TACGTAGGAATTTCTGAGGA+AGG | 0.556506 | 2.3:-56213610 | None:intergenic |
GCAGGAAAGCGATGTAGAAG+AGG | 0.559635 | 2.3:+56216193 | MS.gene56018:CDS |
ATGGCACAAAACAACTTCAC+AGG | 0.561027 | 2.3:+56210415 | MS.gene56018:CDS |
GAGTCTGGAGCACATAGTCC+TGG | 0.563482 | 2.3:+56212321 | MS.gene56018:CDS |
AGAGTATAGCAGGATGAAGA+TGG | 0.564933 | 2.3:+56216310 | MS.gene56018:CDS |
AACATCTTCGAACAAAGCCT+GGG | 0.568972 | 2.3:-56212095 | None:intergenic |
GTGTTTCACGATAATGAACC+AGG | 0.574522 | 2.3:-56212339 | None:intergenic |
ACTAAAATTGCGATATCAGT+CGG | 0.575281 | 2.3:+56215745 | MS.gene56018:CDS |
GTCAGAATAGCTTTGGAACG+TGG | 0.576268 | 2.3:+56213773 | MS.gene56018:CDS |
CAGTGGAAGAAACCCACGAA+GGG | 0.577636 | 2.3:-56213951 | None:intergenic |
TTCATTGACTAAAATGTCAA+CGG | 0.578344 | 2.3:-56213740 | None:intergenic |
GCAAATTCAATGGCTTGACA+TGG | 0.579151 | 2.3:-56211268 | None:intergenic |
ACCAGCAGTGCTTATACGAA+TGG | 0.580709 | 2.3:+56212882 | MS.gene56018:CDS |
TTAAAGAGAAAAGGTTTCCG+TGG | 0.583364 | 2.3:+56216131 | MS.gene56018:CDS |
TAAAGAGAAAAGGTTTCCGT+GGG | 0.583584 | 2.3:+56216132 | MS.gene56018:CDS |
ATGTATCCTTTAAGTACACT+TGG | 0.583656 | 2.3:-56215658 | None:intergenic |
AGTGTACTTAAAGGATACAT+TGG | 0.584610 | 2.3:+56215661 | MS.gene56018:CDS |
GCTTATATGAAAGGATATGA+CGG | 0.585929 | 2.3:+56215506 | MS.gene56018:CDS |
ATTTCCGCGACAAATTTGGA+TGG | 0.585964 | 2.3:+56214748 | MS.gene56018:CDS |
AGTATTTCATATTACTGAGG+TGG | 0.586077 | 2.3:+56213927 | MS.gene56018:CDS |
ACTTGATTGGGATGAACTAG+TGG | 0.587256 | 2.3:+56213266 | MS.gene56018:CDS |
TAATAGCCTGACGTCGCATG+TGG | 0.587369 | 2.3:-56215922 | None:intergenic |
TCAATTTATCAGTCCAGAGG+AGG | 0.588337 | 2.3:+56215769 | MS.gene56018:CDS |
AGAGAAAATATCCAGTTACC+AGG | 0.595253 | 2.3:-56214107 | None:intergenic |
CTCTACGCAACTTCCATGAA+CGG | 0.595420 | 2.3:-56215892 | None:intergenic |
CTTCACTAGAGAAAACATCA+AGG | 0.599161 | 2.3:-56214425 | None:intergenic |
CGATCCTGCTGCTTCAATGG+AGG | 0.599750 | 2.3:+56214332 | MS.gene56018:CDS |
CAGCAGCAGTACAGCCACCA+GGG | 0.604424 | 2.3:-56215478 | None:intergenic |
GGAAGTTCCTAAGCATCTTG+CGG | 0.606340 | 2.3:-56211746 | None:intergenic |
TTAGAGGCTTTCAAGTGCGT+AGG | 0.607046 | 2.3:+56216048 | MS.gene56018:CDS |
ATTTACTGGATCATTTGTAG+TGG | 0.608395 | 2.3:-56215615 | None:intergenic |
TTCTCTTTAAAAGCCAACGC+AGG | 0.610360 | 2.3:-56216118 | None:intergenic |
TGCAATGTTGGGATATACTT+GGG | 0.615912 | 2.3:+56214689 | MS.gene56018:CDS |
TTAGGAACTTCCGAAAAGAT+GGG | 0.618001 | 2.3:+56211757 | MS.gene56018:CDS |
AGCTTACCGGACAACAGCCG+AGG | 0.619242 | 2.3:+56215685 | MS.gene56018:CDS |
CTAAATCAAAGCTTACCGAA+TGG | 0.621517 | 2.3:+56213431 | MS.gene56018:CDS |
TTCACGAATCCAGGAGAATG+CGG | 0.627682 | 2.3:-56214234 | None:intergenic |
TTCTTCCACTGAGAAAACAA+AGG | 0.631295 | 2.3:+56213963 | MS.gene56018:CDS |
AGCTTAGCTGGAAATATCAG+TGG | 0.631881 | 2.3:+56215581 | MS.gene56018:CDS |
TTCACTAGAGAAAACATCAA+GGG | 0.633274 | 2.3:-56214424 | None:intergenic |
AGAACTCATCAATTCTGATG+TGG | 0.633421 | 2.3:+56216625 | MS.gene56018:CDS |
CTTTGAGACAAGAAAAGCAA+TGG | 0.633518 | 2.3:+56215841 | MS.gene56018:CDS |
GATGGCACATAGTCAAGCAA+AGG | 0.635449 | 2.3:+56216328 | MS.gene56018:CDS |
CCGGATTCACCTCAAGCCCA+CGG | 0.642313 | 2.3:-56216148 | None:intergenic |
TTTCTGATACAACTGCACCA+TGG | 0.644660 | 2.3:+56212832 | MS.gene56018:CDS |
TATGACACAGACCTGGATGT+CGG | 0.650638 | 2.3:+56211161 | MS.gene56018:intron |
AATGCGGCAATACCCAGCAT+CGG | 0.652701 | 2.3:-56214218 | None:intergenic |
TTACACACCATGTTCTGTAG+AGG | 0.653988 | 2.3:+56213813 | MS.gene56018:CDS |
ACCCCTACTATACAAAATGG+AGG | 0.655140 | 2.3:+56213303 | MS.gene56018:CDS |
TAAGACTGGTAGGAAACAAG+CGG | 0.659485 | 2.3:+56216223 | MS.gene56018:CDS |
ACCATACGTAGGAATTTCTG+AGG | 0.659507 | 2.3:-56213614 | None:intergenic |
GGTTCAATTTATCAGTCCAG+AGG | 0.660144 | 2.3:+56215766 | MS.gene56018:CDS |
CTGTCCATCCAAATTTGTCG+CGG | 0.660885 | 2.3:-56214752 | None:intergenic |
ACAAGTATTTCATATTACTG+AGG | 0.664709 | 2.3:+56213924 | MS.gene56018:CDS |
GGCCGTGTGCATAATATACG+TGG | 0.667740 | 2.3:-56212065 | None:intergenic |
TCATTATCGTGAAACACAAG+AGG | 0.669255 | 2.3:+56212345 | MS.gene56018:CDS |
AATGGATCAGTAACAGACGA+AGG | 0.679283 | 2.3:-56213859 | None:intergenic |
TCCAATATAATGTGTGTCTG+TGG | 0.683099 | 2.3:+56214153 | MS.gene56018:CDS |
AGTGGAAGAAACCCACGAAG+GGG | 0.688757 | 2.3:-56213950 | None:intergenic |
GTTGACGCCTCTACAGAACA+TGG | 0.690824 | 2.3:-56213820 | None:intergenic |
GATCCAACTACCGAATACCC+TGG | 0.692497 | 2.3:+56215461 | MS.gene56018:CDS |
TTACTGCTCCCAGACTCTGG+CGG | 0.695060 | 2.3:-56213646 | None:intergenic |
GGATGTCGGCGAAACCCTGG+AGG | 0.700592 | 2.3:+56211175 | MS.gene56018:CDS |
ATCCACGTATATTATGCACA+CGG | 0.702464 | 2.3:+56212063 | MS.gene56018:CDS |
TCTGTACTGGATCCGAGCAG+CGG | 0.708022 | 2.3:-56215867 | None:intergenic |
GCACACGGCCAAGATAACCC+AGG | 0.722098 | 2.3:+56212078 | MS.gene56018:CDS |
AGAACGCGTTGAGAGATCTG+TGG | 0.723214 | 2.3:+56216247 | MS.gene56018:CDS |
ACTACTGAGTATGATGCACA+AGG | 0.723260 | 2.3:+56214645 | MS.gene56018:CDS |
GGAGTTAGAATACCATACGT+AGG | 0.723293 | 2.3:-56213625 | None:intergenic |
AATGGAGGAGACATACAACT+GGG | 0.727869 | 2.3:+56214347 | MS.gene56018:CDS |
TCAGTGGAAGAAACCCACGA+AGG | 0.732652 | 2.3:-56213952 | None:intergenic |
TGATTTAGTTGATAGTAACG+CGG | 0.738031 | 2.3:-56213416 | None:intergenic |
AAATGCTGAGAACCTTACAG+AGG | 0.749608 | 2.3:+56215634 | MS.gene56018:CDS |
CCAACTACCGAATACCCTGG+TGG | 0.762091 | 2.3:+56215464 | MS.gene56018:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTATTTTATTTTTTTA+TGG | + | chr2.3:56210563-56210582 | MS.gene56018:intron | 0.0% |
!! | ATCATATTATATAGTATATA+TGG | - | chr2.3:56211350-56211369 | None:intergenic | 10.0% |
!! | ATTTATTTATTGAAGAAAAT+TGG | + | chr2.3:56212727-56212746 | MS.gene56018:intron | 10.0% |
!! | TTTATTTATTGAAGAAAATT+GGG | + | chr2.3:56212728-56212747 | MS.gene56018:intron | 10.0% |
!!! | TTATTTTATTTTTTTATGGA+GGG | + | chr2.3:56210567-56210586 | MS.gene56018:intron | 10.0% |
!!! | TTTATTTTATTTTTTTATGG+AGG | + | chr2.3:56210566-56210585 | MS.gene56018:intron | 10.0% |
!! | AAATTAATCACATATTAGAA+CGG | - | chr2.3:56216427-56216446 | None:intergenic | 15.0% |
!! | AAGATTTCTAATTAAACAAA+AGG | - | chr2.3:56210823-56210842 | None:intergenic | 15.0% |
!! | AATCAAATATAACATAGTTA+TGG | - | chr2.3:56211940-56211959 | None:intergenic | 15.0% |
!! | AATCATTCTATAAATCTTAT+TGG | + | chr2.3:56213709-56213728 | MS.gene56018:CDS | 15.0% |
!! | ATAGTTATATATGTATCTTT+AGG | - | chr2.3:56215245-56215264 | None:intergenic | 15.0% |
!! | ATTTCAAATATATCGTAAAA+AGG | - | chr2.3:56210954-56210973 | None:intergenic | 15.0% |
!! | CAATTATAATTGCAAAATAA+CGG | - | chr2.3:56214057-56214076 | None:intergenic | 15.0% |
!! | TAGTTATATATGTATCTTTA+GGG | - | chr2.3:56215244-56215263 | None:intergenic | 15.0% |
!! | TTGTTTAATTAGAAATCTTT+CGG | + | chr2.3:56210824-56210843 | MS.gene56018:intron | 15.0% |
!!! | TATACTTCAAATTTAACTTT+TGG | + | chr2.3:56213382-56213401 | MS.gene56018:intron | 15.0% |
!! | AACAAAAAATAACGACAATT+TGG | + | chr2.3:56216391-56216410 | MS.gene56018:intron | 20.0% |
!! | AACAATATATCATAACCAAT+AGG | - | chr2.3:56213112-56213131 | None:intergenic | 20.0% |
!! | AACATGCATACATAATATAT+AGG | - | chr2.3:56212179-56212198 | None:intergenic | 20.0% |
!! | AACTTAAAAGAGAAAAATTC+AGG | - | chr2.3:56215988-56216007 | None:intergenic | 20.0% |
!! | AATCCATGAAAATTTAAAAG+TGG | - | chr2.3:56212596-56212615 | None:intergenic | 20.0% |
!! | ACACTACATAATAATCAATT+AGG | - | chr2.3:56213062-56213081 | None:intergenic | 20.0% |
!! | ATTTGAATTTAATGGTGTAA+CGG | - | chr2.3:56212802-56212821 | None:intergenic | 20.0% |
!! | CAATAAATAAATAGATCACA+TGG | - | chr2.3:56212719-56212738 | None:intergenic | 20.0% |
!! | CACTACATAATAATCAATTA+GGG | - | chr2.3:56213061-56213080 | None:intergenic | 20.0% |
!! | GACAAATTTCATATAGTTTA+AGG | - | chr2.3:56214958-56214977 | None:intergenic | 20.0% |
!! | GATATATGAGAAAAAGAAAA+AGG | - | chr2.3:56213992-56214011 | None:intergenic | 20.0% |
!! | GATATTCAAAATTAACAACT+TGG | - | chr2.3:56214296-56214315 | None:intergenic | 20.0% |
!! | GTTAATACAATTCAAATACA+TGG | - | chr2.3:56216520-56216539 | None:intergenic | 20.0% |
!! | TAAATAATTAAACCAAACCA+AGG | - | chr2.3:56210550-56210569 | None:intergenic | 20.0% |
!! | TGATGTTTAATTGTTTAGTA+TGG | + | chr2.3:56210598-56210617 | MS.gene56018:intron | 20.0% |
!!! | ACTATAGAGTTTTTATAAAC+AGG | + | chr2.3:56213576-56213595 | MS.gene56018:intron | 20.0% |
!!! | ATTTGAAGTATAAAATCGTA+AGG | - | chr2.3:56213374-56213393 | None:intergenic | 20.0% |
!!! | GTTTTTATTGTTTTTCTTTC+AGG | + | chr2.3:56212299-56212318 | MS.gene56018:intron | 20.0% |
!!! | TATCCACTTTTAAATTTTCA+TGG | + | chr2.3:56212590-56212609 | MS.gene56018:intron | 20.0% |
!!! | TATTATGATTTGATTTGACA+TGG | + | chr2.3:56216555-56216574 | MS.gene56018:intron | 20.0% |
!!! | TTACGATATATTTGAAATAC+TGG | + | chr2.3:56210956-56210975 | MS.gene56018:intron | 20.0% |
!!! | TTTGGAAAGAAATAATGTTT+TGG | - | chr2.3:56214490-56214509 | None:intergenic | 20.0% |
!!! | TTTGTTTGAAATTTGTCTTA+GGG | + | chr2.3:56215385-56215404 | MS.gene56018:intron | 20.0% |
!!! | TTTTGTTTATTTGATGTTGA+GGG | + | chr2.3:56211865-56211884 | MS.gene56018:intron | 20.0% |
! | AAAAATAACGACAATTTGGA+TGG | + | chr2.3:56216395-56216414 | MS.gene56018:intron | 25.0% |
! | AAAACCAAAAAATACTCGTA+GGG | - | chr2.3:56212465-56212484 | None:intergenic | 25.0% |
! | AAATTAACAACTTGGCTAAT+AGG | - | chr2.3:56214288-56214307 | None:intergenic | 25.0% |
! | AACTGGAAAAAGAAAAATGA+TGG | + | chr2.3:56211783-56211802 | MS.gene56018:CDS | 25.0% |
! | AATAAATAGATCACATGGTA+AGG | - | chr2.3:56212714-56212733 | None:intergenic | 25.0% |
! | AATTGAGTAAACCATCAATT+TGG | - | chr2.3:56215175-56215194 | None:intergenic | 25.0% |
! | ACAAGTATTTCATATTACTG+AGG | + | chr2.3:56213924-56213943 | MS.gene56018:CDS | 25.0% |
! | ACATAATAATCAATTAGGGT+TGG | - | chr2.3:56213057-56213076 | None:intergenic | 25.0% |
! | ACATCATATAACTCACAATA+AGG | - | chr2.3:56211656-56211675 | None:intergenic | 25.0% |
! | ACCAAAATGGAATAATTTGA+TGG | - | chr2.3:56215007-56215026 | None:intergenic | 25.0% |
! | ACTGGAAAAAGAAAAATGAT+GGG | + | chr2.3:56211784-56211803 | MS.gene56018:CDS | 25.0% |
! | ATATTTGTAATTGCTGAGTA+TGG | - | chr2.3:56211240-56211259 | None:intergenic | 25.0% |
! | ATGCATTGTTCAACTATATA+TGG | + | chr2.3:56211519-56211538 | MS.gene56018:intron | 25.0% |
! | ATTTGACATGGTTATTAACT+TGG | + | chr2.3:56216567-56216586 | MS.gene56018:intron | 25.0% |
! | ATTTGTGATCTATGTATTAG+TGG | + | chr2.3:56212202-56212221 | MS.gene56018:intron | 25.0% |
! | CAATTATAATTGAACATCCA+TGG | + | chr2.3:56214065-56214084 | MS.gene56018:intron | 25.0% |
! | GGTTAATTGCATTTAATAGA+CGG | - | chr2.3:56216499-56216518 | None:intergenic | 25.0% |
! | GTAATATGAAATACTTGTTC+CGG | - | chr2.3:56213922-56213941 | None:intergenic | 25.0% |
! | GTTATTGTCATAGATATTGT+TGG | + | chr2.3:56213129-56213148 | MS.gene56018:intron | 25.0% |
! | TAAAAGTTGTCAAAGATTTG+AGG | - | chr2.3:56210734-56210753 | None:intergenic | 25.0% |
! | TAAAGAACACAAATGAAAGA+AGG | - | chr2.3:56213481-56213500 | None:intergenic | 25.0% |
! | TATAATGTTGTGTGTAAAAC+AGG | + | chr2.3:56211702-56211721 | MS.gene56018:intron | 25.0% |
! | TATAATTGCAAAATAACGGT+AGG | - | chr2.3:56214053-56214072 | None:intergenic | 25.0% |
! | TCCATTAAATAGATCTATGT+AGG | - | chr2.3:56211581-56211600 | None:intergenic | 25.0% |
! | TCCTACATAGATCTATTTAA+TGG | + | chr2.3:56211577-56211596 | MS.gene56018:intron | 25.0% |
! | TCTTAAAAATTGAACTTCAC+CGG | + | chr2.3:56212399-56212418 | MS.gene56018:intron | 25.0% |
! | TTACCAATGAATGTGTTTAA+GGG | + | chr2.3:56212509-56212528 | MS.gene56018:intron | 25.0% |
! | TTTACCAATGAATGTGTTTA+AGG | + | chr2.3:56212508-56212527 | MS.gene56018:intron | 25.0% |
! | TTTGAATTTAATGGTGTAAC+GGG | - | chr2.3:56212801-56212820 | None:intergenic | 25.0% |
!! | AAGGAAATTGTTACTGTTTT+AGG | - | chr2.3:56210935-56210954 | None:intergenic | 25.0% |
!! | AATATACGTCTTTATTTGTC+CGG | - | chr2.3:56212421-56212440 | None:intergenic | 25.0% |
!! | AGTAATTTTCAATGCAACTT+AGG | + | chr2.3:56210661-56210680 | MS.gene56018:intron | 25.0% |
!! | CATGAAGTGTATAAAACTTT+TGG | - | chr2.3:56214508-56214527 | None:intergenic | 25.0% |
!! | GATGGATTTCATATAGTTTA+TGG | - | chr2.3:56214989-56215008 | None:intergenic | 25.0% |
!! | GTTTGTTTGAAATTTGTCTT+AGG | + | chr2.3:56215384-56215403 | MS.gene56018:intron | 25.0% |
!! | TCCATCAAATTATTCCATTT+TGG | + | chr2.3:56215003-56215022 | MS.gene56018:intron | 25.0% |
!! | TCTGATAGCAATATACTTTT+GGG | - | chr2.3:56211293-56211312 | None:intergenic | 25.0% |
!! | TGTTCTAAACTATATATCGA+TGG | - | chr2.3:56211005-56211024 | None:intergenic | 25.0% |
!! | TTAAGTTGTTAATGCTTGAT+TGG | + | chr2.3:56216001-56216020 | MS.gene56018:intron | 25.0% |
!! | TTCATTGACTAAAATGTCAA+CGG | - | chr2.3:56213743-56213762 | None:intergenic | 25.0% |
!! | TTCTGATAGCAATATACTTT+TGG | - | chr2.3:56211294-56211313 | None:intergenic | 25.0% |
!!! | AATTTTTGATTATGCTACCT+TGG | + | chr2.3:56210530-56210549 | MS.gene56018:intron | 25.0% |
!!! | AGTGAAAAAAGAAGTTTTGT+CGG | + | chr2.3:56210684-56210703 | MS.gene56018:intron | 25.0% |
!!! | ATGCTTTTTTTCTTTGTAAC+CGG | - | chr2.3:56210881-56210900 | None:intergenic | 25.0% |
!!! | GTTTTGTTTATTTGATGTTG+AGG | + | chr2.3:56211864-56211883 | MS.gene56018:intron | 25.0% |
AAACAATGATATTTCCGTTC+AGG | - | chr2.3:56215364-56215383 | None:intergenic | 30.0% | |
AAAGCTTCAACAAGAACTAA+AGG | - | chr2.3:56211444-56211463 | None:intergenic | 30.0% | |
AACACATTCATTGGTAAACA+AGG | - | chr2.3:56212506-56212525 | None:intergenic | 30.0% | |
AAGCTTCAACAAGAACTAAA+GGG | - | chr2.3:56211443-56211462 | None:intergenic | 30.0% | |
AATACCCCTACTATACAAAA+TGG | + | chr2.3:56213300-56213319 | MS.gene56018:CDS | 30.0% | |
AATCTGTTTGTTCAAACAAC+TGG | - | chr2.3:56214824-56214843 | None:intergenic | 30.0% | |
AATTCATTTGTGTGCAATGT+TGG | + | chr2.3:56214677-56214696 | MS.gene56018:CDS | 30.0% | |
AATTTGTCTTAGGGAGAATA+TGG | + | chr2.3:56215394-56215413 | MS.gene56018:intron | 30.0% | |
ACAGTAAAGGGAATGAAAAT+AGG | - | chr2.3:56213177-56213196 | None:intergenic | 30.0% | |
ACATTATATTGGACTTTGCA+AGG | - | chr2.3:56214146-56214165 | None:intergenic | 30.0% | |
ACTAAAATTGCGATATCAGT+CGG | + | chr2.3:56215745-56215764 | MS.gene56018:CDS | 30.0% | |
AGTATTTCATATTACTGAGG+TGG | + | chr2.3:56213927-56213946 | MS.gene56018:CDS | 30.0% | |
AGTGTACTTAAAGGATACAT+TGG | + | chr2.3:56215661-56215680 | MS.gene56018:CDS | 30.0% | |
ATACCCTTAAACACATTCAT+TGG | - | chr2.3:56212515-56212534 | None:intergenic | 30.0% | |
ATATAGTTTAGAGACCAAAC+AGG | + | chr2.3:56215129-56215148 | MS.gene56018:intron | 30.0% | |
ATGAGCTTAATACACTTGAT+TGG | + | chr2.3:56213253-56213272 | MS.gene56018:CDS | 30.0% | |
ATGTATCCTTTAAGTACACT+TGG | - | chr2.3:56215661-56215680 | None:intergenic | 30.0% | |
ATGTGATTAATTTCGTTACG+TGG | + | chr2.3:56216434-56216453 | MS.gene56018:intron | 30.0% | |
ATTCATTTGTGTGCAATGTT+GGG | + | chr2.3:56214678-56214697 | MS.gene56018:CDS | 30.0% | |
ATTTACTGGATCATTTGTAG+TGG | - | chr2.3:56215618-56215637 | None:intergenic | 30.0% | |
CACACAAATGAATTACACTT+TGG | - | chr2.3:56214671-56214690 | None:intergenic | 30.0% | |
CTTGTTAGTATACACCAAAA+TGG | - | chr2.3:56215020-56215039 | None:intergenic | 30.0% | |
GAAAACCAAAAAATACTCGT+AGG | - | chr2.3:56212466-56212485 | None:intergenic | 30.0% | |
GATAGATGTTAGTAAGTTAG+TGG | + | chr2.3:56210764-56210783 | MS.gene56018:intron | 30.0% | |
GCTTATATGAAAGGATATGA+CGG | + | chr2.3:56215506-56215525 | MS.gene56018:CDS | 30.0% | |
GGAATGAAAATAGGTATCTA+CGG | - | chr2.3:56213168-56213187 | None:intergenic | 30.0% | |
GGATAATACTATCAACCTAT+TGG | + | chr2.3:56213094-56213113 | MS.gene56018:intron | 30.0% | |
GGCAATATCGTAAAATTCTA+TGG | + | chr2.3:56216069-56216088 | MS.gene56018:CDS | 30.0% | |
GTATACTAACAAGAGATACT+AGG | + | chr2.3:56215027-56215046 | MS.gene56018:intron | 30.0% | |
TAATCAACAATCTTCTCTTC+CGG | + | chr2.3:56213900-56213919 | MS.gene56018:CDS | 30.0% | |
TAGTTTAGAGACTAACTTGA+CGG | + | chr2.3:56215072-56215091 | MS.gene56018:intron | 30.0% | |
TATCACTAGAAGACAGAAAA+AGG | - | chr2.3:56213524-56213543 | None:intergenic | 30.0% | |
TATTATATATGACACAGACC+TGG | + | chr2.3:56211154-56211173 | MS.gene56018:intron | 30.0% | |
TGAGCTTAATACACTTGATT+GGG | + | chr2.3:56213254-56213273 | MS.gene56018:CDS | 30.0% | |
TGAGTTATATGATGTCAAAC+AGG | + | chr2.3:56211661-56211680 | MS.gene56018:intron | 30.0% | |
TTAACTCACCAACTGATTAA+GGG | + | chr2.3:56210853-56210872 | MS.gene56018:intron | 30.0% | |
TTAGTCTCTTTCAATGTAGT+AGG | - | chr2.3:56214456-56214475 | None:intergenic | 30.0% | |
TTCACTAGAGAAAACATCAA+GGG | - | chr2.3:56214427-56214446 | None:intergenic | 30.0% | |
TTGAATTTCGTCTTCAAATG+AGG | + | chr2.3:56214370-56214389 | MS.gene56018:CDS | 30.0% | |
TTTGATCGTTAACACTTTCT+GGG | - | chr2.3:56213687-56213706 | None:intergenic | 30.0% | |
! | AACGAAGTTTTTATAGACTC+GGG | - | chr2.3:56212538-56212557 | None:intergenic | 30.0% |
! | AATGTTTAGCTTAACCCTTA+AGG | + | chr2.3:56212145-56212164 | MS.gene56018:intron | 30.0% |
! | AGTTTTTATAAACAGGTTGC+TGG | + | chr2.3:56213583-56213602 | MS.gene56018:intron | 30.0% |
! | ATACTTTTGGGCAAATTCAA+TGG | - | chr2.3:56211281-56211300 | None:intergenic | 30.0% |
! | ATCATTAAGTTAAGCACTGT+AGG | + | chr2.3:56215280-56215299 | MS.gene56018:intron | 30.0% |
! | ATGTAGTGTTGTTACACATT+AGG | + | chr2.3:56213073-56213092 | MS.gene56018:intron | 30.0% |
! | ATTGGTTATATTTTCGATGC+AGG | + | chr2.3:56216019-56216038 | MS.gene56018:intron | 30.0% |
! | CAACGAAGTTTTTATAGACT+CGG | - | chr2.3:56212539-56212558 | None:intergenic | 30.0% |
! | GCAAATAGTAAAGTGACTTT+TGG | + | chr2.3:56212274-56212293 | MS.gene56018:intron | 30.0% |
! | TACCTCCATTTTGTATAGTA+GGG | - | chr2.3:56213308-56213327 | None:intergenic | 30.0% |
! | TCATTAAGTTAAGCACTGTA+GGG | + | chr2.3:56215281-56215300 | MS.gene56018:intron | 30.0% |
! | TTACCTCCATTTTGTATAGT+AGG | - | chr2.3:56213309-56213328 | None:intergenic | 30.0% |
! | TTTTGATCGTTAACACTTTC+TGG | - | chr2.3:56213688-56213707 | None:intergenic | 30.0% |
!! | CTTCAAATTTAACTTTTGGC+AGG | + | chr2.3:56213386-56213405 | MS.gene56018:intron | 30.0% |
!! | GGAAAGAAATAATGTTTTGG+AGG | - | chr2.3:56214487-56214506 | None:intergenic | 30.0% |
!! | GTTGACATTTTAGTCAATGA+AGG | + | chr2.3:56213742-56213761 | MS.gene56018:CDS | 30.0% |
!! | TGATTTAGTTGATAGTAACG+CGG | - | chr2.3:56213419-56213438 | None:intergenic | 30.0% |
!! | TTATCTTTCAGAAAAGTGTC+TGG | + | chr2.3:56215538-56215557 | MS.gene56018:CDS | 30.0% |
!!! | CTTTTGGAACGTATTGTTTT+AGG | + | chr2.3:56214615-56214634 | MS.gene56018:CDS | 30.0% |
!!! | GAGTATTTTTTGGTTTTCTG+AGG | + | chr2.3:56212468-56212487 | MS.gene56018:intron | 30.0% |
!!! | GCATTTTTTTCCTTCTAATC+TGG | + | chr2.3:56215331-56215350 | MS.gene56018:intron | 30.0% |
!!! | GCTTGTTTTAGAGACATATT+TGG | - | chr2.3:56212565-56212584 | None:intergenic | 30.0% |
AAATAGAGATTCACGAATCC+AGG | - | chr2.3:56214246-56214265 | None:intergenic | 35.0% | |
AAGTCTTCTGATAGAATCCA+TGG | - | chr2.3:56212852-56212871 | None:intergenic | 35.0% | |
AATCTCTATTTGAGCTTCGA+TGG | + | chr2.3:56214255-56214274 | MS.gene56018:CDS | 35.0% | |
AATGTTGTGTGTAAAACAGG+TGG | + | chr2.3:56211705-56211724 | MS.gene56018:intron | 35.0% | |
ACATATCAATCATGAGTCTC+GGG | - | chr2.3:56212681-56212700 | None:intergenic | 35.0% | |
AGAACATGGTGTGTAAGATA+TGG | - | chr2.3:56213809-56213828 | None:intergenic | 35.0% | |
AGAACTCATCAATTCTGATG+TGG | + | chr2.3:56216625-56216644 | MS.gene56018:CDS | 35.0% | |
AGAGAAAATATCCAGTTACC+AGG | - | chr2.3:56214110-56214129 | None:intergenic | 35.0% | |
AGTTGTCAAAGATTTGAGGA+AGG | - | chr2.3:56210730-56210749 | None:intergenic | 35.0% | |
ATATAGGAATCGAGACCTTA+AGG | - | chr2.3:56212163-56212182 | None:intergenic | 35.0% | |
ATCCACGTATATTATGCACA+CGG | + | chr2.3:56212063-56212082 | MS.gene56018:CDS | 35.0% | |
ATGCATTGTACTACCTCTTA+AGG | - | chr2.3:56210476-56210495 | None:intergenic | 35.0% | |
ATGGATTCTATCAGAAGACT+TGG | + | chr2.3:56212851-56212870 | MS.gene56018:CDS | 35.0% | |
CAAAATAACGGTAGGAAAGA+AGG | - | chr2.3:56214045-56214064 | None:intergenic | 35.0% | |
CACATATCAATCATGAGTCT+CGG | - | chr2.3:56212682-56212701 | None:intergenic | 35.0% | |
CGTAAAATTCTATGGTCTGT+TGG | + | chr2.3:56216077-56216096 | MS.gene56018:CDS | 35.0% | |
CTAAATCAAAGCTTACCGAA+TGG | + | chr2.3:56213431-56213450 | MS.gene56018:CDS | 35.0% | |
CTTAACTCACCAACTGATTA+AGG | + | chr2.3:56210852-56210871 | MS.gene56018:intron | 35.0% | |
CTTCACTAGAGAAAACATCA+AGG | - | chr2.3:56214428-56214447 | None:intergenic | 35.0% | |
GATACTAGGAACTAAAGAAG+CGG | + | chr2.3:56215041-56215060 | MS.gene56018:intron | 35.0% | |
GATTAATTTCGTTACGTGGA+TGG | + | chr2.3:56216438-56216457 | MS.gene56018:intron | 35.0% | |
GCTGATCTTGCTTATATGAA+AGG | + | chr2.3:56215497-56215516 | MS.gene56018:CDS | 35.0% | |
GGACTCGCATTTGAATTTAA+TGG | - | chr2.3:56212810-56212829 | None:intergenic | 35.0% | |
TAAAGAGAAAAGGTTTCCGT+GGG | + | chr2.3:56216132-56216151 | MS.gene56018:CDS | 35.0% | |
TACTTGAGAGACCAAATTGA+TGG | + | chr2.3:56215161-56215180 | MS.gene56018:intron | 35.0% | |
TATAGGAATCGAGACCTTAA+GGG | - | chr2.3:56212162-56212181 | None:intergenic | 35.0% | |
TATTGCTATCAGAACTAACC+TGG | + | chr2.3:56211300-56211319 | MS.gene56018:intron | 35.0% | |
TCATTATCGTGAAACACAAG+AGG | + | chr2.3:56212345-56212364 | MS.gene56018:CDS | 35.0% | |
TCCAATATAATGTGTGTCTG+TGG | + | chr2.3:56214153-56214172 | MS.gene56018:CDS | 35.0% | |
TGAAAAACAAACTCAGGGAA+TGG | + | chr2.3:56214592-56214611 | MS.gene56018:CDS | 35.0% | |
TGAGTAGAATCAGAAACATG+TGG | + | chr2.3:56211057-56211076 | MS.gene56018:intron | 35.0% | |
TGCGTTGAAAAACAAACTCA+GGG | + | chr2.3:56214587-56214606 | MS.gene56018:CDS | 35.0% | |
TGTTCCTGTAGAAATTGTTC+AGG | + | chr2.3:56214185-56214204 | MS.gene56018:CDS | 35.0% | |
TTAAAGAGAAAAGGTTTCCG+TGG | + | chr2.3:56216131-56216150 | MS.gene56018:CDS | 35.0% | |
TTAGGAACTTCCGAAAAGAT+GGG | + | chr2.3:56211757-56211776 | MS.gene56018:CDS | 35.0% | |
TTCTTCCACTGAGAAAACAA+AGG | + | chr2.3:56213963-56213982 | MS.gene56018:CDS | 35.0% | |
TTGATTATGCTACCTTGGTT+TGG | + | chr2.3:56210535-56210554 | MS.gene56018:intron | 35.0% | |
TTGCAAAGTCAGAATAGCTT+TGG | + | chr2.3:56213766-56213785 | MS.gene56018:CDS | 35.0% | |
TTGCGTTGAAAAACAAACTC+AGG | + | chr2.3:56214586-56214605 | MS.gene56018:CDS | 35.0% | |
TTTCAACGCAATTTCGAACA+AGG | - | chr2.3:56214577-56214596 | None:intergenic | 35.0% | |
TTTCTGTCTTCTAGTGATAC+CGG | + | chr2.3:56213525-56213544 | MS.gene56018:intron | 35.0% | |
! | ACCTCCATTTTGTATAGTAG+GGG | - | chr2.3:56213307-56213326 | None:intergenic | 35.0% |
! | GCTTTGTTCGAAGATGTTAT+TGG | + | chr2.3:56212100-56212119 | MS.gene56018:CDS | 35.0% |
! | TACTGATCCATTTTCATCAC+TGG | + | chr2.3:56213870-56213889 | MS.gene56018:CDS | 35.0% |
! | TCATCTAAAGTGAGCAAGAA+AGG | - | chr2.3:56212649-56212668 | None:intergenic | 35.0% |
! | TTTTCATTGCTGCTACTATC+TGG | - | chr2.3:56215802-56215821 | None:intergenic | 35.0% |
!! | AACAAGGTATTTTTCGCTTG+CGG | - | chr2.3:56214561-56214580 | None:intergenic | 35.0% |
!! | CTAACTTGACGGATTTCATA+TGG | + | chr2.3:56215083-56215102 | MS.gene56018:intron | 35.0% |
!! | CTTAATCAGTTGGTGAGTTA+AGG | - | chr2.3:56210854-56210873 | None:intergenic | 35.0% |
!! | CTTTGAGACAAGAAAAGCAA+TGG | + | chr2.3:56215841-56215860 | MS.gene56018:CDS | 35.0% |
!! | TTAAGCACTGTAGGGTTTTT+AGG | + | chr2.3:56215289-56215308 | MS.gene56018:intron | 35.0% |
!! | TTGTTTTTCTTTCAGGAGTC+TGG | + | chr2.3:56212306-56212325 | MS.gene56018:intron | 35.0% |
!!! | AAGACCCTACGAGTATTTTT+TGG | + | chr2.3:56212458-56212477 | MS.gene56018:intron | 35.0% |
!!! | ATTACTTTGTTTTCGTGGTC+AGG | + | chr2.3:56214714-56214733 | MS.gene56018:CDS | 35.0% |
!!! | CGTTGGCTTTTAAAGAGAAA+AGG | + | chr2.3:56216122-56216141 | MS.gene56018:CDS | 35.0% |
AAATGCTGAGAACCTTACAG+AGG | + | chr2.3:56215634-56215653 | MS.gene56018:CDS | 40.0% | |
AACATCTTCGAACAAAGCCT+GGG | - | chr2.3:56212098-56212117 | None:intergenic | 40.0% | |
AACTTCACAGGACAACTTGT+TGG | + | chr2.3:56210427-56210446 | MS.gene56018:CDS | 40.0% | |
AAGCTTCTGTTCATGACTTC+TGG | - | chr2.3:56213232-56213251 | None:intergenic | 40.0% | |
AAGTATCACACTCTCCTGTT+TGG | - | chr2.3:56215146-56215165 | None:intergenic | 40.0% | |
AATCTGGTTATGAGCCTGAA+CGG | + | chr2.3:56215347-56215366 | MS.gene56018:intron | 40.0% | |
AATGGAGGAGACATACAACT+GGG | + | chr2.3:56214347-56214366 | MS.gene56018:CDS | 40.0% | |
AATGGATCAGTAACAGACGA+AGG | - | chr2.3:56213862-56213881 | None:intergenic | 40.0% | |
ACATTGTCAAAGCTGCCATT+CGG | - | chr2.3:56213449-56213468 | None:intergenic | 40.0% | |
ACCATACGTAGGAATTTCTG+AGG | - | chr2.3:56213617-56213636 | None:intergenic | 40.0% | |
ACCCCTACTATACAAAATGG+AGG | + | chr2.3:56213303-56213322 | MS.gene56018:CDS | 40.0% | |
ACCTACCTCGAAAACAGTAA+AGG | - | chr2.3:56213190-56213209 | None:intergenic | 40.0% | |
ACTACTGAGTATGATGCACA+AGG | + | chr2.3:56214645-56214664 | MS.gene56018:CDS | 40.0% | |
ACTTAGGGGACACAATTGAT+GGG | - | chr2.3:56214884-56214903 | None:intergenic | 40.0% | |
ACTTGATTGGGATGAACTAG+TGG | + | chr2.3:56213266-56213285 | MS.gene56018:CDS | 40.0% | |
AGACATGAAAGATGAGAAGC+AGG | + | chr2.3:56216175-56216194 | MS.gene56018:CDS | 40.0% | |
AGAGGACCAAGTGTACTTAA+AGG | + | chr2.3:56215652-56215671 | MS.gene56018:CDS | 40.0% | |
AGAGTATAGCAGGATGAAGA+TGG | + | chr2.3:56216310-56216329 | MS.gene56018:CDS | 40.0% | |
AGCAGTGAGAGTGATACTTA+GGG | - | chr2.3:56214899-56214918 | None:intergenic | 40.0% | |
AGCTTAGCTGGAAATATCAG+TGG | + | chr2.3:56215581-56215600 | MS.gene56018:CDS | 40.0% | |
AGGCTCATAACCAGATTAGA+AGG | - | chr2.3:56215344-56215363 | None:intergenic | 40.0% | |
AGTATGGCGTGAATCTCATT+CGG | - | chr2.3:56211224-56211243 | None:intergenic | 40.0% | |
AGTTGGATCTGTCACCAAAT+TGG | - | chr2.3:56215450-56215469 | None:intergenic | 40.0% | |
ATCAGAGCCAATGGCTTATT+CGG | + | chr2.3:56213342-56213361 | MS.gene56018:intron | 40.0% | |
ATGGCACAAAACAACTTCAC+AGG | + | chr2.3:56210415-56210434 | MS.gene56018:CDS | 40.0% | |
ATTTCCGCGACAAATTTGGA+TGG | + | chr2.3:56214748-56214767 | MS.gene56018:CDS | 40.0% | |
CAACTTGGCTAATAGGCTTA+TGG | - | chr2.3:56214281-56214300 | None:intergenic | 40.0% | |
CATGGATTTCACACCTTAAG+AGG | + | chr2.3:56210460-56210479 | MS.gene56018:CDS | 40.0% | |
CCAACCTGAACAATTTCTAC+AGG | - | chr2.3:56214192-56214211 | None:intergenic | 40.0% | |
CCTACCTCGAAAACAGTAAA+GGG | - | chr2.3:56213189-56213208 | None:intergenic | 40.0% | |
CCTGTAGAAATTGTTCAGGT+TGG | + | chr2.3:56214189-56214208 | MS.gene56018:CDS | 40.0% | |
CTAACCTGGTGTTTCTTTAG+TGG | + | chr2.3:56211314-56211333 | MS.gene56018:intron | 40.0% | |
CTAGATTTCCGCGACAAATT+TGG | + | chr2.3:56214744-56214763 | MS.gene56018:CDS | 40.0% | |
CTATCAGAAGACTTGGATTC+TGG | + | chr2.3:56212858-56212877 | MS.gene56018:CDS | 40.0% | |
CTCATGAGCACTTAAAAGTG+AGG | + | chr2.3:56211823-56211842 | MS.gene56018:intron | 40.0% | |
CTGGATCATTTGTAGTGGTT+TGG | - | chr2.3:56215613-56215632 | None:intergenic | 40.0% | |
CTTAGGAACTTCCGAAAAGA+TGG | + | chr2.3:56211756-56211775 | MS.gene56018:CDS | 40.0% | |
CTTCATTGGGCAGCATATAA+TGG | + | chr2.3:56214777-56214796 | MS.gene56018:CDS | 40.0% | |
CTTGTTGCGCTTTCTTAGAA+CGG | - | chr2.3:56216292-56216311 | None:intergenic | 40.0% | |
GAATCCACTAAAGAAACACC+AGG | - | chr2.3:56211321-56211340 | None:intergenic | 40.0% | |
GAGAAAACATCAAGGGTCTT+CGG | - | chr2.3:56214420-56214439 | None:intergenic | 40.0% | |
GCAAATTCAATGGCTTGACA+TGG | - | chr2.3:56211271-56211290 | None:intergenic | 40.0% | |
GCCACAGACACACATTATAT+TGG | - | chr2.3:56214157-56214176 | None:intergenic | 40.0% | |
GGAGTTAGAATACCATACGT+AGG | - | chr2.3:56213628-56213647 | None:intergenic | 40.0% | |
GGTGCAGTTGTATCAGAAAT+AGG | - | chr2.3:56212831-56212850 | None:intergenic | 40.0% | |
GGTTCAATTTATCAGTCCAG+AGG | + | chr2.3:56215766-56215785 | MS.gene56018:CDS | 40.0% | |
GTAAGGTTCTCAGCATTTAC+TGG | - | chr2.3:56215632-56215651 | None:intergenic | 40.0% | |
GTAGAATTGCTTTGTGCAGT+TGG | + | chr2.3:56216589-56216608 | MS.gene56018:intron | 40.0% | |
GTGCAATGTTGGGATATACT+TGG | + | chr2.3:56214688-56214707 | MS.gene56018:CDS | 40.0% | |
GTGTTTCACGATAATGAACC+AGG | - | chr2.3:56212342-56212361 | None:intergenic | 40.0% | |
GTTCTTTCCGAATAAGCCAT+TGG | - | chr2.3:56213352-56213371 | None:intergenic | 40.0% | |
GTTGGATCTGTCACCAAATT+GGG | - | chr2.3:56215449-56215468 | None:intergenic | 40.0% | |
GTTTGTTCAAACAACTGGAG+TGG | - | chr2.3:56214819-56214838 | None:intergenic | 40.0% | |
TAACATCTTCGAACAAAGCC+TGG | - | chr2.3:56212099-56212118 | None:intergenic | 40.0% | |
TAAGACTGGTAGGAAACAAG+CGG | + | chr2.3:56216223-56216242 | MS.gene56018:CDS | 40.0% | |
TACTTAGGGGACACAATTGA+TGG | - | chr2.3:56214885-56214904 | None:intergenic | 40.0% | |
TAGCAGTGAGAGTGATACTT+AGG | - | chr2.3:56214900-56214919 | None:intergenic | 40.0% | |
TATTTGACCGCAAGATGCTT+AGG | + | chr2.3:56211739-56211758 | MS.gene56018:CDS | 40.0% | |
TCAATTTATCAGTCCAGAGG+AGG | + | chr2.3:56215769-56215788 | MS.gene56018:CDS | 40.0% | |
TCATCTTTCATGTCTTCGTC+CGG | - | chr2.3:56216170-56216189 | None:intergenic | 40.0% | |
TCCATCACCAGTGATGAAAA+TGG | - | chr2.3:56213880-56213899 | None:intergenic | 40.0% | |
TCCTCAGAAATTCCTACGTA+TGG | + | chr2.3:56213613-56213632 | MS.gene56018:CDS | 40.0% | |
TCTTGTCTCAAAGTTGCGAA+AGG | - | chr2.3:56215834-56215853 | None:intergenic | 40.0% | |
TTACACACCATGTTCTGTAG+AGG | + | chr2.3:56213813-56213832 | MS.gene56018:CDS | 40.0% | |
TTCAATGACATGAGCTTAGC+TGG | + | chr2.3:56215569-56215588 | MS.gene56018:CDS | 40.0% | |
TTCTGCTTTATCAGAGCCAA+TGG | + | chr2.3:56213333-56213352 | MS.gene56018:intron | 40.0% | |
TTGAGAAAGTAATCCTGCGT+TGG | + | chr2.3:56216105-56216124 | MS.gene56018:CDS | 40.0% | |
TTTCTGATACAACTGCACCA+TGG | + | chr2.3:56212832-56212851 | MS.gene56018:CDS | 40.0% | |
! | CATTCCCTTTACTGTTTTCG+AGG | + | chr2.3:56213182-56213201 | MS.gene56018:intron | 40.0% |
! | GACGGATTTCATATGGTTCA+AGG | + | chr2.3:56215090-56215109 | MS.gene56018:intron | 40.0% |
! | GTATTTTTCGCTTGCGGAAA+GGG | - | chr2.3:56214555-56214574 | None:intergenic | 40.0% |
! | TACGTAGGAATTTCTGAGGA+AGG | - | chr2.3:56213613-56213632 | None:intergenic | 40.0% |
! | TCCATTTTCATCACTGGTGA+TGG | + | chr2.3:56213876-56213895 | MS.gene56018:CDS | 40.0% |
! | TGCTAACATTCGTTAGGTTG+TGG | + | chr2.3:56212753-56212772 | MS.gene56018:intron | 40.0% |
! | TTCTCTTTAAAAGCCAACGC+AGG | - | chr2.3:56216121-56216140 | None:intergenic | 40.0% |
! | TTTTGTGAGGGTTTGAACTC+TGG | + | chr2.3:56210796-56210815 | MS.gene56018:intron | 40.0% |
!! | AGGACTTCTTTAAGACTGGT+AGG | + | chr2.3:56216213-56216232 | MS.gene56018:CDS | 40.0% |
!! | CTTGTTGGTTCAGAGATACA+TGG | + | chr2.3:56210442-56210461 | MS.gene56018:CDS | 40.0% |
!! | GAAGAGGACTTCTTTAAGAC+TGG | + | chr2.3:56216209-56216228 | MS.gene56018:CDS | 40.0% |
!! | GTTTTCGAGGTAGGTCTTAA+TGG | + | chr2.3:56213195-56213214 | MS.gene56018:intron | 40.0% |
!!! | GGAAACCTTTGTTTTCTCAG+TGG | - | chr2.3:56213971-56213990 | None:intergenic | 40.0% |
!!! | TGGTTGCGTTAGTTTTGTGA+GGG | + | chr2.3:56210784-56210803 | MS.gene56018:intron | 40.0% |
AACCGGTACCCTTAATCAGT+TGG | - | chr2.3:56210864-56210883 | None:intergenic | 45.0% | |
ACCAGCAGTGCTTATACGAA+TGG | + | chr2.3:56212882-56212901 | MS.gene56018:CDS | 45.0% | |
ACGCATACAAGCAGCGTTTA+GGG | + | chr2.3:56215715-56215734 | MS.gene56018:CDS | 45.0% | |
AGGATACATTGGCAGCTTAC+CGG | + | chr2.3:56215672-56215691 | MS.gene56018:CDS | 45.0% | |
AGTACACTTGGTCCTCTGTA+AGG | - | chr2.3:56215649-56215668 | None:intergenic | 45.0% | |
CAATGGAGGAGACATACAAC+TGG | + | chr2.3:56214346-56214365 | MS.gene56018:CDS | 45.0% | |
CAGGACCTGCAAGAAGTAAA+GGG | - | chr2.3:56214091-56214110 | None:intergenic | 45.0% | |
CAGTTGTACGAGTACAAAGC+CGG | - | chr2.3:56213547-56213566 | None:intergenic | 45.0% | |
CGCTTTCTTAGAACGGAACA+TGG | - | chr2.3:56216285-56216304 | None:intergenic | 45.0% | |
CGTTACCAACCTGATTGACA+GGG | - | chr2.3:56212035-56212054 | None:intergenic | 45.0% | |
CTCTACGCAACTTCCATGAA+CGG | - | chr2.3:56215895-56215914 | None:intergenic | 45.0% | |
CTGTCCATCCAAATTTGTCG+CGG | - | chr2.3:56214755-56214774 | None:intergenic | 45.0% | |
CTTATTTCCCCCTGTCAATC+AGG | + | chr2.3:56212023-56212042 | MS.gene56018:intron | 45.0% | |
GAACAAAGCCTGGGTTATCT+TGG | - | chr2.3:56212089-56212108 | None:intergenic | 45.0% | |
GATGGCACATAGTCAAGCAA+AGG | + | chr2.3:56216328-56216347 | MS.gene56018:CDS | 45.0% | |
GCAGTGAGAGTGATACTTAG+GGG | - | chr2.3:56214898-56214917 | None:intergenic | 45.0% | |
GGAAGTTCCTAAGCATCTTG+CGG | - | chr2.3:56211749-56211768 | None:intergenic | 45.0% | |
GTTACCAACCTGATTGACAG+GGG | - | chr2.3:56212034-56212053 | None:intergenic | 45.0% | |
GTTGCTACGTTGTTGTCTTG+TGG | + | chr2.3:56215416-56215435 | MS.gene56018:CDS | 45.0% | |
TATGACACAGACCTGGATGT+CGG | + | chr2.3:56211161-56211180 | MS.gene56018:intron | 45.0% | |
TCCAGTACAGATTCCGTTCA+TGG | + | chr2.3:56215879-56215898 | MS.gene56018:CDS | 45.0% | |
TCCATGAACGGAATCTGTAC+TGG | - | chr2.3:56215883-56215902 | None:intergenic | 45.0% | |
TCGTTACCAACCTGATTGAC+AGG | - | chr2.3:56212036-56212055 | None:intergenic | 45.0% | |
TGGAGGAAGCAAAAAGCAGA+TGG | + | chr2.3:56211192-56211211 | MS.gene56018:CDS | 45.0% | |
TGGATGGACAGCTCTTCATT+GGG | + | chr2.3:56214764-56214783 | MS.gene56018:CDS | 45.0% | |
TTACCAACCTGATTGACAGG+GGG | - | chr2.3:56212033-56212052 | None:intergenic | 45.0% | |
TTCACGAATCCAGGAGAATG+CGG | - | chr2.3:56214237-56214256 | None:intergenic | 45.0% | |
TTGGATGGACAGCTCTTCAT+TGG | + | chr2.3:56214763-56214782 | MS.gene56018:CDS | 45.0% | |
TTGTGGAGCAAAGCCCAATT+TGG | + | chr2.3:56215433-56215452 | MS.gene56018:CDS | 45.0% | |
! | AAGCGCAACAAGAGTATAGC+AGG | + | chr2.3:56216300-56216319 | MS.gene56018:CDS | 45.0% |
! | ACCATTCGTATAAGCACTGC+TGG | - | chr2.3:56212886-56212905 | None:intergenic | 45.0% |
! | CAAACTCAGGGAATGGCTTT+TGG | + | chr2.3:56214599-56214618 | MS.gene56018:CDS | 45.0% |
! | CACCAACTGATTAAGGGTAC+CGG | + | chr2.3:56210859-56210878 | MS.gene56018:intron | 45.0% |
! | GGTATTTTTCGCTTGCGGAA+AGG | - | chr2.3:56214556-56214575 | None:intergenic | 45.0% |
! | TCCAGTTGTGCCCATCTTTT+CGG | - | chr2.3:56211770-56211789 | None:intergenic | 45.0% |
! | TTAGAGGCTTTCAAGTGCGT+AGG | + | chr2.3:56216048-56216067 | MS.gene56018:CDS | 45.0% |
!! | CCCTTTACTGTTTTCGAGGT+AGG | + | chr2.3:56213186-56213205 | MS.gene56018:intron | 45.0% |
!! | GTCAGAATAGCTTTGGAACG+TGG | + | chr2.3:56213773-56213792 | MS.gene56018:CDS | 45.0% |
!! | TGGGCTTGCTAACATTCGTT+AGG | + | chr2.3:56212747-56212766 | MS.gene56018:intron | 45.0% |
!!! | ATCTGCTTTTTGCTTCCTCC+AGG | - | chr2.3:56211193-56211212 | None:intergenic | 45.0% |
!!! | GTGGTTGCGTTAGTTTTGTG+AGG | + | chr2.3:56210783-56210802 | MS.gene56018:intron | 45.0% |
!!! | TCTGCTTTTTGCTTCCTCCA+GGG | - | chr2.3:56211192-56211211 | None:intergenic | 45.0% |
!!! | TATTATTTTTATATACTTTA+GGG | - | chr2.3:56214929-56214948 | None:intergenic | 5.0% |
!!! | TTATTATTTTTATATACTTT+AGG | - | chr2.3:56214930-56214949 | None:intergenic | 5.0% |
AAAAGGTTTCCGTGGGCTTG+AGG | + | chr2.3:56216139-56216158 | MS.gene56018:CDS | 50.0% | |
AATGCGGCAATACCCAGCAT+CGG | - | chr2.3:56214221-56214240 | None:intergenic | 50.0% | |
ACATTACTGCTCCCAGACTC+TGG | - | chr2.3:56213652-56213671 | None:intergenic | 50.0% | |
AGAACGCGTTGAGAGATCTG+TGG | + | chr2.3:56216247-56216266 | MS.gene56018:CDS | 50.0% | |
AGGTTGGAGTTTACCGATGC+TGG | + | chr2.3:56214205-56214224 | MS.gene56018:CDS | 50.0% | |
AGTGGAAGAAACCCACGAAG+GGG | - | chr2.3:56213953-56213972 | None:intergenic | 50.0% | |
ATTCTAACTCCGCCAGAGTC+TGG | + | chr2.3:56213637-56213656 | MS.gene56018:CDS | 50.0% | |
CACGCATACAAGCAGCGTTT+AGG | + | chr2.3:56215714-56215733 | MS.gene56018:CDS | 50.0% | |
CAGTGGAAGAAACCCACGAA+GGG | - | chr2.3:56213954-56213973 | None:intergenic | 50.0% | |
CATGGCCCTTTACTTCTTGC+AGG | + | chr2.3:56214083-56214102 | MS.gene56018:intron | 50.0% | |
CCAGGACCTGCAAGAAGTAA+AGG | - | chr2.3:56214092-56214111 | None:intergenic | 50.0% | |
CCTTTACTTCTTGCAGGTCC+TGG | + | chr2.3:56214089-56214108 | MS.gene56018:intron | 50.0% | |
CTGCAAGAAGTAAAGGGCCA+TGG | - | chr2.3:56214085-56214104 | None:intergenic | 50.0% | |
GATCCAACTACCGAATACCC+TGG | + | chr2.3:56215461-56215480 | MS.gene56018:CDS | 50.0% | |
GCAGCAGGATCGTGCAAAAT+AGG | - | chr2.3:56214324-56214343 | None:intergenic | 50.0% | |
GCAGGAAAGCGATGTAGAAG+AGG | + | chr2.3:56216193-56216212 | MS.gene56018:CDS | 50.0% | |
GGCCGTGTGCATAATATACG+TGG | - | chr2.3:56212068-56212087 | None:intergenic | 50.0% | |
GGTTGGAGTTTACCGATGCT+GGG | + | chr2.3:56214206-56214225 | MS.gene56018:CDS | 50.0% | |
GTTGACGCCTCTACAGAACA+TGG | - | chr2.3:56213823-56213842 | None:intergenic | 50.0% | |
TAATAGCCTGACGTCGCATG+TGG | - | chr2.3:56215925-56215944 | None:intergenic | 50.0% | |
TCAGTGGAAGAAACCCACGA+AGG | - | chr2.3:56213955-56213974 | None:intergenic | 50.0% | |
TCCGAAAAGATGGGCACAAC+TGG | + | chr2.3:56211766-56211785 | MS.gene56018:CDS | 50.0% | |
TCGATGCAGGCTGCATTTAG+AGG | + | chr2.3:56216032-56216051 | MS.gene56018:intron | 50.0% | |
TTCTAACTCCGCCAGAGTCT+GGG | + | chr2.3:56213638-56213657 | MS.gene56018:CDS | 50.0% | |
TTCTTGCAGGTCCTGGTAAC+TGG | + | chr2.3:56214096-56214115 | MS.gene56018:intron | 50.0% | |
TTTCCCCCTGTCAATCAGGT+TGG | + | chr2.3:56212027-56212046 | MS.gene56018:intron | 50.0% | |
! | AGTACAGCCACCAGGGTATT+CGG | - | chr2.3:56215474-56215493 | None:intergenic | 50.0% |
! | TTTTTCGCTTGCGGAAAGGG+AGG | - | chr2.3:56214552-56214571 | None:intergenic | 50.0% |
CCAACTACCGAATACCCTGG+TGG | + | chr2.3:56215464-56215483 | MS.gene56018:CDS | 55.0% | |
GTCTCCTCCATTGAAGCAGC+AGG | - | chr2.3:56214339-56214358 | None:intergenic | 55.0% | |
GTTTCTCCACATGCGACGTC+AGG | + | chr2.3:56215916-56215935 | MS.gene56018:CDS | 55.0% | |
TCTGTACTGGATCCGAGCAG+CGG | - | chr2.3:56215870-56215889 | None:intergenic | 55.0% | |
TTACTGCTCCCAGACTCTGG+CGG | - | chr2.3:56213649-56213668 | None:intergenic | 55.0% | |
! | CCACCAGGGTATTCGGTAGT+TGG | - | chr2.3:56215467-56215486 | None:intergenic | 55.0% |
! | CGATCCTGCTGCTTCAATGG+AGG | + | chr2.3:56214332-56214351 | MS.gene56018:CDS | 55.0% |
! | GAGTCTGGAGCACATAGTCC+TGG | + | chr2.3:56212321-56212340 | MS.gene56018:CDS | 55.0% |
! | GCACGATCCTGCTGCTTCAA+TGG | + | chr2.3:56214329-56214348 | MS.gene56018:CDS | 55.0% |
! | TGGGTATTGCCGCATTCTCC+TGG | + | chr2.3:56214225-56214244 | MS.gene56018:CDS | 55.0% |
! | TTGTATGCGTGCTGCTGCCT+CGG | - | chr2.3:56215705-56215724 | None:intergenic | 55.0% |
AAGCAATGGCAGCCGCTGCT+CGG | + | chr2.3:56215855-56215874 | MS.gene56018:CDS | 60.0% | |
AGCTTACCGGACAACAGCCG+AGG | + | chr2.3:56215685-56215704 | MS.gene56018:CDS | 60.0% | |
ATCTGGCGTGCTTCCTCCTC+TGG | - | chr2.3:56215785-56215804 | None:intergenic | 60.0% | |
CAGCAGCAGTACAGCCACCA+GGG | - | chr2.3:56215481-56215500 | None:intergenic | 60.0% | |
CCGGATTCACCTCAAGCCCA+CGG | - | chr2.3:56216151-56216170 | None:intergenic | 60.0% | |
CCGTGGGCTTGAGGTGAATC+CGG | + | chr2.3:56216148-56216167 | MS.gene56018:CDS | 60.0% | |
GCACACGGCCAAGATAACCC+AGG | + | chr2.3:56212078-56212097 | MS.gene56018:CDS | 60.0% | |
TACTGAGGTGGCCCCTTCGT+GGG | + | chr2.3:56213939-56213958 | MS.gene56018:CDS | 60.0% | |
TCAGCAGCAGTACAGCCACC+AGG | - | chr2.3:56215482-56215501 | None:intergenic | 60.0% | |
TTACTGAGGTGGCCCCTTCG+TGG | + | chr2.3:56213938-56213957 | MS.gene56018:CDS | 60.0% | |
CCAGGGTTTCGCCGACATCC+AGG | - | chr2.3:56211175-56211194 | None:intergenic | 65.0% | |
CCTGGATGTCGGCGAAACCC+TGG | + | chr2.3:56211172-56211191 | MS.gene56018:CDS | 65.0% | |
CTGCTGCCTCGGCTGTTGTC+CGG | - | chr2.3:56215694-56215713 | None:intergenic | 65.0% | |
GGATGTCGGCGAAACCCTGG+AGG | + | chr2.3:56211175-56211194 | MS.gene56018:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 56210412 | 56216670 | 56210412 | ID=MS.gene56018 |
chr2.3 | mRNA | 56210412 | 56216670 | 56210412 | ID=MS.gene56018.t1;Parent=MS.gene56018 |
chr2.3 | exon | 56210412 | 56210481 | 56210412 | ID=MS.gene56018.t1.exon1;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56210412 | 56210481 | 56210412 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56211171 | 56211296 | 56211171 | ID=MS.gene56018.t1.exon2;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56211171 | 56211296 | 56211171 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56211724 | 56211839 | 56211724 | ID=MS.gene56018.t1.exon3;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56211724 | 56211839 | 56211724 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56212045 | 56212133 | 56212045 | ID=MS.gene56018.t1.exon4;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56212045 | 56212133 | 56212045 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56212321 | 56212366 | 56212321 | ID=MS.gene56018.t1.exon5;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56212321 | 56212366 | 56212321 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56212786 | 56212903 | 56212786 | ID=MS.gene56018.t1.exon6;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56212786 | 56212903 | 56212786 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56213208 | 56213324 | 56213208 | ID=MS.gene56018.t1.exon7;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56213208 | 56213324 | 56213208 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56213408 | 56213466 | 56213408 | ID=MS.gene56018.t1.exon8;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56213408 | 56213466 | 56213408 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56213598 | 56213984 | 56213598 | ID=MS.gene56018.t1.exon9;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56213598 | 56213984 | 56213598 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56214105 | 56214802 | 56214105 | ID=MS.gene56018.t1.exon10;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56214105 | 56214802 | 56214105 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56215406 | 56215952 | 56215406 | ID=MS.gene56018.t1.exon11;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56215406 | 56215952 | 56215406 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56216041 | 56216349 | 56216041 | ID=MS.gene56018.t1.exon12;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56216041 | 56216349 | 56216041 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
chr2.3 | exon | 56216608 | 56216670 | 56216608 | ID=MS.gene56018.t1.exon13;Parent=MS.gene56018.t1 |
chr2.3 | CDS | 56216608 | 56216670 | 56216608 | ID=cds.MS.gene56018.t1;Parent=MS.gene56018.t1 |
Gene Sequence |
Protein sequence |