Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29827.t1 | XP_024635482.1 | 96.3 | 510 | 19 | 0 | 1 | 510 | 1 | 510 | 1.90E-277 | 964.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29827.t1 | Q93Y91 | 61.5 | 504 | 189 | 3 | 1 | 501 | 1 | 502 | 1.1e-175 | 617.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29827.t1 | A0A396IVA9 | 96.3 | 510 | 19 | 0 | 1 | 510 | 1 | 510 | 1.4e-277 | 964.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049549 | MS.gene29827 | 0.816564 | 5.18E-52 | -1.69E-46 |
MS.gene050095 | MS.gene29827 | 0.804934 | 1.70E-49 | -1.69E-46 |
MS.gene050096 | MS.gene29827 | 0.829177 | 5.96E-55 | -1.69E-46 |
MS.gene050647 | MS.gene29827 | 0.810881 | 9.24E-51 | -1.69E-46 |
MS.gene052211 | MS.gene29827 | 0.808071 | 3.71E-50 | -1.69E-46 |
MS.gene05240 | MS.gene29827 | 0.842714 | 2.18E-58 | -1.69E-46 |
MS.gene05244 | MS.gene29827 | 0.837182 | 6.04E-57 | -1.69E-46 |
MS.gene053031 | MS.gene29827 | 0.809661 | 1.69E-50 | -1.69E-46 |
MS.gene053033 | MS.gene29827 | 0.80039 | 1.47E-48 | -1.69E-46 |
MS.gene053406 | MS.gene29827 | 0.828865 | 7.09E-55 | -1.69E-46 |
MS.gene054421 | MS.gene29827 | 0.8233 | 1.49E-53 | -1.69E-46 |
MS.gene054742 | MS.gene29827 | 0.812712 | 3.69E-51 | -1.69E-46 |
MS.gene055240 | MS.gene29827 | 0.811755 | 5.97E-51 | -1.69E-46 |
MS.gene056224 | MS.gene29827 | 0.800443 | 1.44E-48 | -1.69E-46 |
MS.gene056590 | MS.gene29827 | 0.824269 | 8.84E-54 | -1.69E-46 |
MS.gene056591 | MS.gene29827 | 0.823848 | 1.11E-53 | -1.69E-46 |
MS.gene056920 | MS.gene29827 | 0.804856 | 1.77E-49 | -1.69E-46 |
MS.gene057544 | MS.gene29827 | 0.806357 | 8.55E-50 | -1.69E-46 |
MS.gene058603 | MS.gene29827 | 0.837328 | 5.55E-57 | -1.69E-46 |
MS.gene059953 | MS.gene29827 | 0.806975 | 6.34E-50 | -1.69E-46 |
MS.gene059955 | MS.gene29827 | 0.828073 | 1.10E-54 | -1.69E-46 |
MS.gene060087 | MS.gene29827 | 0.80681 | 6.87E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29827.t1 | MTR_3g074390 | 88.867 | 512 | 55 | 1 | 1 | 510 | 1 | 512 | 0.0 | 924 |
MS.gene29827.t1 | MTR_3g074410 | 80.980 | 510 | 96 | 1 | 1 | 510 | 1 | 509 | 0.0 | 853 |
MS.gene29827.t1 | MTR_3g074380 | 95.082 | 366 | 18 | 0 | 1 | 366 | 1 | 366 | 0.0 | 701 |
MS.gene29827.t1 | MTR_3g074270 | 66.135 | 502 | 146 | 4 | 1 | 502 | 1 | 478 | 0.0 | 682 |
MS.gene29827.t1 | MTR_3g008160 | 52.590 | 502 | 229 | 7 | 12 | 508 | 9 | 506 | 0.0 | 549 |
MS.gene29827.t1 | MTR_3g074340 | 77.709 | 323 | 72 | 0 | 188 | 510 | 18 | 340 | 0.0 | 533 |
MS.gene29827.t1 | MTR_3g074320 | 77.399 | 323 | 73 | 0 | 188 | 510 | 18 | 340 | 0.0 | 531 |
MS.gene29827.t1 | MTR_5g006070 | 50.909 | 495 | 231 | 8 | 20 | 508 | 16 | 504 | 0.0 | 531 |
MS.gene29827.t1 | MTR_3g074370 | 77.709 | 323 | 72 | 0 | 188 | 510 | 18 | 340 | 0.0 | 531 |
MS.gene29827.t1 | MTR_0204s0020 | 52.083 | 480 | 225 | 4 | 20 | 498 | 15 | 490 | 0.0 | 529 |
MS.gene29827.t1 | MTR_3g008170 | 52.929 | 495 | 225 | 6 | 10 | 500 | 8 | 498 | 0.0 | 529 |
MS.gene29827.t1 | MTR_3g074400 | 62.667 | 450 | 114 | 5 | 53 | 481 | 1 | 417 | 0.0 | 521 |
MS.gene29827.t1 | MTR_5g094760 | 53.012 | 498 | 228 | 5 | 1 | 496 | 1 | 494 | 0.0 | 520 |
MS.gene29827.t1 | MTR_0204s0020 | 51.134 | 485 | 229 | 5 | 15 | 498 | 10 | 487 | 0.0 | 519 |
MS.gene29827.t1 | MTR_7g091690 | 52.610 | 498 | 230 | 5 | 1 | 496 | 1 | 494 | 3.64e-180 | 515 |
MS.gene29827.t1 | MTR_4g116790 | 50.928 | 485 | 233 | 4 | 20 | 503 | 21 | 501 | 6.49e-176 | 505 |
MS.gene29827.t1 | MTR_5g082540 | 50.710 | 493 | 236 | 4 | 20 | 507 | 17 | 507 | 8.48e-176 | 504 |
MS.gene29827.t1 | MTR_0204s0040 | 50.837 | 478 | 230 | 4 | 20 | 496 | 23 | 496 | 1.37e-175 | 504 |
MS.gene29827.t1 | MTR_3g008160 | 52.278 | 461 | 211 | 7 | 53 | 508 | 1 | 457 | 1.47e-175 | 502 |
MS.gene29827.t1 | MTR_0009s0370 | 48.214 | 504 | 254 | 5 | 8 | 506 | 3 | 504 | 3.68e-174 | 500 |
MS.gene29827.t1 | MTR_1g038630 | 49.689 | 483 | 239 | 3 | 20 | 500 | 17 | 497 | 6.93e-174 | 500 |
MS.gene29827.t1 | MTR_4g116770 | 50.837 | 478 | 230 | 4 | 20 | 496 | 219 | 692 | 5.56e-173 | 504 |
MS.gene29827.t1 | MTR_5g041550 | 48.638 | 514 | 254 | 6 | 1 | 509 | 1 | 509 | 4.40e-172 | 495 |
MS.gene29827.t1 | MTR_3g093010 | 48.928 | 513 | 251 | 6 | 1 | 508 | 1 | 507 | 4.49e-170 | 490 |
MS.gene29827.t1 | MTR_5g006070 | 49.348 | 460 | 223 | 7 | 53 | 506 | 1 | 456 | 1.67e-168 | 484 |
MS.gene29827.t1 | MTR_1g104770 | 47.036 | 506 | 257 | 7 | 1 | 501 | 1 | 500 | 1.47e-167 | 483 |
MS.gene29827.t1 | MTR_3g023480 | 47.305 | 501 | 257 | 5 | 13 | 508 | 8 | 506 | 1.31e-166 | 481 |
MS.gene29827.t1 | MTR_4g091370 | 51.534 | 489 | 231 | 5 | 20 | 504 | 17 | 503 | 3.50e-166 | 480 |
MS.gene29827.t1 | MTR_1g104750 | 47.036 | 506 | 256 | 8 | 1 | 501 | 1 | 499 | 1.39e-165 | 478 |
MS.gene29827.t1 | MTR_1g104780 | 48.745 | 478 | 235 | 7 | 32 | 503 | 28 | 501 | 3.24e-165 | 478 |
MS.gene29827.t1 | MTR_8g102860 | 47.571 | 494 | 251 | 7 | 21 | 510 | 21 | 510 | 4.87e-162 | 470 |
MS.gene29827.t1 | MTR_6g087040 | 46.784 | 513 | 265 | 8 | 1 | 509 | 1 | 509 | 5.77e-162 | 469 |
MS.gene29827.t1 | MTR_6g088375 | 46.784 | 513 | 265 | 8 | 1 | 509 | 1 | 509 | 5.77e-162 | 469 |
MS.gene29827.t1 | MTR_1g038600 | 47.609 | 481 | 234 | 4 | 20 | 500 | 17 | 479 | 3.92e-160 | 464 |
MS.gene29827.t1 | MTR_3g007910 | 46.230 | 504 | 232 | 8 | 1 | 501 | 1 | 468 | 8.21e-156 | 452 |
MS.gene29827.t1 | MTR_4g090600 | 50.710 | 493 | 236 | 6 | 20 | 508 | 17 | 506 | 3.49e-154 | 449 |
MS.gene29827.t1 | MTR_3g093060 | 47.903 | 453 | 228 | 5 | 53 | 499 | 1 | 451 | 5.77e-152 | 442 |
MS.gene29827.t1 | MTR_8g102860 | 46.753 | 462 | 238 | 7 | 53 | 510 | 1 | 458 | 4.00e-148 | 432 |
MS.gene29827.t1 | MTR_4g116790 | 50.720 | 347 | 168 | 3 | 20 | 365 | 21 | 365 | 7.86e-120 | 357 |
MS.gene29827.t1 | MTR_3g074330 | 73.913 | 161 | 32 | 2 | 1 | 154 | 1 | 158 | 4.48e-72 | 227 |
MS.gene29827.t1 | MTR_3g074360 | 73.913 | 161 | 32 | 2 | 1 | 154 | 1 | 158 | 4.48e-72 | 227 |
MS.gene29827.t1 | MTR_3g074310 | 73.292 | 161 | 33 | 2 | 1 | 154 | 1 | 158 | 2.52e-71 | 225 |
MS.gene29827.t1 | MTR_4g072030 | 30.041 | 486 | 294 | 10 | 30 | 494 | 31 | 491 | 5.20e-58 | 201 |
MS.gene29827.t1 | MTR_6g088450 | 30.652 | 460 | 287 | 9 | 31 | 480 | 63 | 500 | 4.97e-57 | 198 |
MS.gene29827.t1 | MTR_4g069500 | 28.000 | 500 | 314 | 9 | 30 | 508 | 34 | 508 | 1.16e-56 | 197 |
MS.gene29827.t1 | MTR_4g069500 | 29.493 | 434 | 279 | 7 | 96 | 508 | 31 | 458 | 2.56e-56 | 195 |
MS.gene29827.t1 | MTR_8g103500 | 27.778 | 486 | 316 | 9 | 17 | 490 | 9 | 471 | 6.52e-54 | 189 |
MS.gene29827.t1 | MTR_8g077890 | 30.816 | 490 | 284 | 12 | 31 | 493 | 24 | 485 | 2.72e-53 | 187 |
MS.gene29827.t1 | MTR_3g116240 | 27.066 | 484 | 310 | 7 | 30 | 492 | 32 | 493 | 5.60e-51 | 182 |
MS.gene29827.t1 | MTR_2g013310 | 29.325 | 474 | 299 | 10 | 27 | 490 | 53 | 500 | 3.05e-50 | 180 |
MS.gene29827.t1 | MTR_2g013310 | 30.073 | 409 | 270 | 6 | 91 | 490 | 26 | 427 | 1.38e-49 | 176 |
MS.gene29827.t1 | MTR_5g075300 | 27.869 | 488 | 301 | 10 | 31 | 493 | 24 | 485 | 1.28e-47 | 172 |
MS.gene29827.t1 | MTR_8g077310 | 26.824 | 466 | 315 | 5 | 21 | 486 | 42 | 481 | 5.49e-47 | 170 |
MS.gene29827.t1 | MTR_5g096000 | 50.000 | 184 | 70 | 2 | 1 | 184 | 1 | 162 | 1.07e-46 | 165 |
MS.gene29827.t1 | MTR_5g096000 | 46.622 | 148 | 74 | 2 | 359 | 501 | 152 | 299 | 1.16e-32 | 127 |
MS.gene29827.t1 | MTR_4g077740 | 28.361 | 476 | 300 | 13 | 27 | 486 | 46 | 496 | 1.45e-45 | 167 |
MS.gene29827.t1 | MTR_8g077310 | 27.877 | 391 | 275 | 2 | 96 | 486 | 1 | 384 | 1.62e-45 | 164 |
MS.gene29827.t1 | MTR_7g446340 | 25.703 | 498 | 321 | 13 | 23 | 507 | 51 | 512 | 9.56e-45 | 165 |
MS.gene29827.t1 | MTR_6g007340 | 25.703 | 498 | 321 | 13 | 23 | 507 | 51 | 512 | 9.56e-45 | 165 |
MS.gene29827.t1 | MTR_8g077300 | 27.518 | 407 | 278 | 4 | 85 | 486 | 79 | 473 | 9.56e-44 | 161 |
MS.gene29827.t1 | MTR_7g094450 | 28.224 | 411 | 275 | 8 | 82 | 488 | 77 | 471 | 4.40e-42 | 157 |
MS.gene29827.t1 | MTR_6g018790 | 26.004 | 473 | 311 | 8 | 20 | 486 | 99 | 538 | 1.82e-41 | 156 |
MS.gene29827.t1 | MTR_5g020270 | 26.452 | 465 | 314 | 7 | 23 | 486 | 47 | 484 | 2.75e-41 | 155 |
MS.gene29827.t1 | MTR_5g020270 | 28.061 | 392 | 273 | 4 | 96 | 486 | 1 | 384 | 4.76e-41 | 152 |
MS.gene29827.t1 | MTR_1g116660 | 26.338 | 467 | 317 | 8 | 32 | 493 | 41 | 485 | 3.29e-40 | 152 |
MS.gene29827.t1 | MTR_2g020710 | 26.829 | 410 | 271 | 7 | 86 | 486 | 1 | 390 | 5.93e-40 | 149 |
MS.gene29827.t1 | MTR_2g020710 | 24.899 | 494 | 317 | 10 | 8 | 486 | 25 | 479 | 8.25e-40 | 150 |
MS.gene29827.t1 | MTR_7g082270 | 25.702 | 463 | 301 | 9 | 32 | 486 | 71 | 498 | 1.68e-39 | 150 |
MS.gene29827.t1 | MTR_5g019870 | 26.852 | 432 | 279 | 10 | 93 | 493 | 57 | 482 | 1.55e-38 | 147 |
MS.gene29827.t1 | MTR_4g118610 | 26.055 | 403 | 285 | 5 | 85 | 486 | 92 | 482 | 1.86e-38 | 147 |
MS.gene29827.t1 | MTR_7g094110 | 28.818 | 406 | 269 | 8 | 85 | 486 | 82 | 471 | 4.17e-38 | 145 |
MS.gene29827.t1 | MTR_2g049020 | 29.598 | 348 | 214 | 6 | 33 | 370 | 33 | 359 | 7.16e-38 | 147 |
MS.gene29827.t1 | MTR_7g005910 | 25.536 | 466 | 321 | 9 | 32 | 493 | 39 | 482 | 1.90e-37 | 144 |
MS.gene29827.t1 | MTR_3g084110 | 23.729 | 472 | 321 | 9 | 33 | 493 | 35 | 478 | 2.53e-37 | 144 |
MS.gene29827.t1 | MTR_1g022315 | 25.377 | 398 | 277 | 4 | 96 | 486 | 1 | 385 | 1.40e-36 | 140 |
MS.gene29827.t1 | MTR_1g116650 | 25.636 | 472 | 311 | 10 | 28 | 493 | 78 | 515 | 1.74e-36 | 142 |
MS.gene29827.t1 | MTR_1g022315 | 25.428 | 409 | 285 | 4 | 85 | 486 | 89 | 484 | 1.80e-36 | 141 |
MS.gene29827.t1 | MTR_5g077580 | 24.645 | 564 | 307 | 12 | 33 | 505 | 33 | 569 | 2.78e-36 | 142 |
MS.gene29827.t1 | MTR_2g048720 | 29.619 | 341 | 218 | 6 | 33 | 368 | 33 | 356 | 2.89e-36 | 142 |
MS.gene29827.t1 | MTR_7g082270 | 25.183 | 409 | 268 | 7 | 32 | 435 | 71 | 446 | 3.44e-35 | 137 |
MS.gene29827.t1 | MTR_7g113960 | 24.569 | 464 | 311 | 7 | 26 | 486 | 27 | 454 | 5.62e-35 | 137 |
MS.gene29827.t1 | MTR_4g069500 | 28.000 | 325 | 209 | 6 | 203 | 508 | 1 | 319 | 2.85e-34 | 132 |
MS.gene29827.t1 | MTR_0064s0040 | 50.000 | 136 | 55 | 2 | 20 | 154 | 18 | 141 | 8.88e-34 | 125 |
MS.gene29827.t1 | MTR_7g113970 | 23.769 | 467 | 315 | 8 | 25 | 486 | 61 | 491 | 2.49e-33 | 132 |
MS.gene29827.t1 | MTR_5g020270 | 24.731 | 465 | 301 | 8 | 23 | 486 | 47 | 463 | 2.59e-33 | 132 |
MS.gene29827.t1 | MTR_8g077310 | 26.361 | 349 | 231 | 5 | 21 | 369 | 42 | 364 | 2.00e-32 | 128 |
MS.gene29827.t1 | MTR_7g094110 | 27.654 | 405 | 255 | 8 | 85 | 486 | 82 | 451 | 2.54e-31 | 126 |
MS.gene29827.t1 | MTR_4g013205 | 26.053 | 380 | 264 | 6 | 110 | 486 | 103 | 468 | 1.49e-30 | 124 |
MS.gene29827.t1 | MTR_3g080240 | 26.350 | 463 | 301 | 13 | 31 | 486 | 98 | 527 | 4.55e-29 | 120 |
MS.gene29827.t1 | MTR_1g038620 | 36.875 | 160 | 82 | 3 | 204 | 363 | 50 | 190 | 1.07e-28 | 112 |
MS.gene29827.t1 | MTR_2g026160 | 27.557 | 352 | 229 | 6 | 33 | 375 | 34 | 368 | 1.14e-28 | 120 |
MS.gene29827.t1 | MTR_2g020710 | 25.284 | 352 | 229 | 7 | 8 | 352 | 25 | 349 | 1.92e-27 | 114 |
MS.gene29827.t1 | MTR_2g020710 | 25.284 | 352 | 229 | 7 | 8 | 352 | 25 | 349 | 2.66e-27 | 114 |
MS.gene29827.t1 | MTR_2g020710 | 28.253 | 269 | 184 | 4 | 85 | 352 | 89 | 349 | 2.97e-27 | 113 |
MS.gene29827.t1 | MTR_6g087910 | 23.947 | 380 | 272 | 6 | 110 | 486 | 117 | 482 | 3.89e-27 | 114 |
MS.gene29827.t1 | MTR_4g064820 | 29.201 | 363 | 223 | 12 | 25 | 371 | 95 | 439 | 4.63e-26 | 111 |
MS.gene29827.t1 | MTR_4g118610 | 24.850 | 334 | 238 | 5 | 85 | 417 | 92 | 413 | 6.40e-26 | 110 |
MS.gene29827.t1 | MTR_1g114280 | 34.810 | 158 | 84 | 2 | 349 | 506 | 21 | 159 | 6.52e-25 | 101 |
MS.gene29827.t1 | MTR_2g026140 | 25.360 | 347 | 221 | 8 | 32 | 369 | 30 | 347 | 3.38e-22 | 100 |
MS.gene29827.t1 | MTR_7g113960 | 24.316 | 329 | 222 | 4 | 26 | 354 | 27 | 328 | 4.37e-22 | 98.6 |
MS.gene29827.t1 | MTR_7g113970 | 22.993 | 274 | 203 | 3 | 85 | 358 | 102 | 367 | 2.27e-21 | 96.7 |
MS.gene29827.t1 | MTR_3g116060 | 30.460 | 174 | 114 | 4 | 105 | 274 | 64 | 234 | 2.82e-18 | 88.6 |
MS.gene29827.t1 | MTR_3g118530 | 29.444 | 180 | 124 | 3 | 97 | 274 | 58 | 236 | 3.51e-17 | 85.1 |
MS.gene29827.t1 | MTR_5g024740 | 25.862 | 290 | 183 | 9 | 24 | 310 | 2 | 262 | 4.82e-17 | 84.7 |
MS.gene29827.t1 | MTR_3g118530 | 29.444 | 180 | 124 | 3 | 97 | 274 | 58 | 236 | 1.35e-16 | 83.2 |
MS.gene29827.t1 | MTR_5g044910 | 27.234 | 235 | 151 | 6 | 24 | 256 | 2 | 218 | 3.34e-16 | 82.0 |
MS.gene29827.t1 | MTR_8g073100 | 27.660 | 235 | 148 | 6 | 25 | 256 | 3 | 218 | 4.16e-16 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29827.t1 | AT1G34580 | 61.508 | 504 | 189 | 3 | 1 | 501 | 1 | 502 | 0.0 | 638 |
MS.gene29827.t1 | AT1G34580 | 61.283 | 452 | 172 | 2 | 53 | 501 | 1 | 452 | 0.0 | 579 |
MS.gene29827.t1 | AT5G26340 | 50.586 | 512 | 242 | 8 | 1 | 507 | 1 | 506 | 0.0 | 535 |
MS.gene29827.t1 | AT1G11260 | 53.971 | 491 | 218 | 6 | 20 | 506 | 17 | 503 | 0.0 | 532 |
MS.gene29827.t1 | AT4G02050 | 49.511 | 511 | 252 | 5 | 1 | 509 | 1 | 507 | 0.0 | 524 |
MS.gene29827.t1 | AT4G02050 | 49.511 | 511 | 252 | 5 | 1 | 509 | 1 | 507 | 0.0 | 524 |
MS.gene29827.t1 | AT3G19940 | 50.888 | 507 | 243 | 6 | 1 | 505 | 1 | 503 | 0.0 | 521 |
MS.gene29827.t1 | AT3G19930 | 52.079 | 505 | 235 | 5 | 1 | 503 | 1 | 500 | 0.0 | 518 |
MS.gene29827.t1 | AT3G19930 | 52.079 | 505 | 235 | 5 | 1 | 503 | 1 | 500 | 0.0 | 518 |
MS.gene29827.t1 | AT1G50310 | 50.581 | 516 | 245 | 7 | 1 | 509 | 1 | 513 | 7.90e-180 | 515 |
MS.gene29827.t1 | AT4G21480 | 51.927 | 493 | 233 | 4 | 13 | 503 | 10 | 500 | 2.02e-177 | 508 |
MS.gene29827.t1 | AT5G23270 | 51.587 | 504 | 234 | 7 | 1 | 499 | 1 | 499 | 3.28e-176 | 506 |
MS.gene29827.t1 | AT5G61520 | 46.881 | 497 | 253 | 5 | 19 | 508 | 17 | 509 | 2.51e-165 | 478 |
MS.gene29827.t1 | AT1G77210 | 45.957 | 507 | 267 | 7 | 1 | 504 | 1 | 503 | 6.17e-161 | 466 |
MS.gene29827.t1 | AT1G77210 | 45.957 | 507 | 267 | 7 | 1 | 504 | 1 | 503 | 6.17e-161 | 466 |
MS.gene29827.t1 | AT5G26250 | 45.714 | 490 | 260 | 5 | 20 | 507 | 16 | 501 | 6.05e-157 | 456 |
MS.gene29827.t1 | AT3G05960 | 46.029 | 491 | 259 | 5 | 20 | 508 | 15 | 501 | 8.22e-156 | 454 |
MS.gene29827.t1 | AT5G61520 | 45.905 | 464 | 240 | 5 | 52 | 508 | 2 | 461 | 9.15e-149 | 434 |
MS.gene29827.t1 | AT1G07340 | 45.473 | 486 | 254 | 7 | 21 | 501 | 18 | 497 | 1.13e-139 | 412 |
MS.gene29827.t1 | AT1G50310 | 50.000 | 362 | 173 | 5 | 154 | 509 | 11 | 370 | 3.53e-126 | 373 |
MS.gene29827.t1 | AT1G77210 | 43.059 | 353 | 195 | 6 | 154 | 504 | 6 | 354 | 2.14e-106 | 322 |
MS.gene29827.t1 | AT2G16120 | 30.579 | 484 | 295 | 9 | 30 | 493 | 30 | 492 | 5.81e-61 | 209 |
MS.gene29827.t1 | AT2G16130 | 29.652 | 489 | 293 | 10 | 30 | 493 | 30 | 492 | 3.38e-59 | 204 |
MS.gene29827.t1 | AT3G18830 | 28.279 | 488 | 303 | 10 | 30 | 494 | 40 | 503 | 2.84e-55 | 194 |
MS.gene29827.t1 | AT2G18480 | 29.895 | 475 | 282 | 11 | 40 | 490 | 36 | 483 | 8.59e-54 | 189 |
MS.gene29827.t1 | AT4G36670 | 28.200 | 500 | 306 | 11 | 30 | 505 | 21 | 491 | 5.14e-50 | 179 |
MS.gene29827.t1 | AT1G75220 | 25.910 | 467 | 320 | 4 | 23 | 489 | 45 | 485 | 5.85e-45 | 165 |
MS.gene29827.t1 | AT1G08900 | 28.395 | 405 | 276 | 5 | 85 | 488 | 23 | 414 | 2.51e-44 | 162 |
MS.gene29827.t1 | AT1G08900 | 28.395 | 405 | 276 | 5 | 85 | 488 | 57 | 448 | 4.48e-44 | 162 |
MS.gene29827.t1 | AT1G08900 | 28.395 | 405 | 276 | 5 | 85 | 488 | 65 | 456 | 5.93e-44 | 162 |
MS.gene29827.t1 | AT1G08900 | 28.395 | 405 | 276 | 5 | 85 | 488 | 65 | 456 | 5.93e-44 | 162 |
MS.gene29827.t1 | AT2G48020 | 28.186 | 408 | 275 | 7 | 85 | 489 | 68 | 460 | 1.00e-43 | 161 |
MS.gene29827.t1 | AT2G48020 | 28.186 | 408 | 275 | 7 | 85 | 489 | 68 | 460 | 1.00e-43 | 161 |
MS.gene29827.t1 | AT2G20780 | 26.625 | 477 | 306 | 12 | 23 | 486 | 51 | 496 | 8.13e-42 | 157 |
MS.gene29827.t1 | AT1G19450 | 25.641 | 468 | 322 | 4 | 23 | 490 | 46 | 487 | 1.11e-41 | 156 |
MS.gene29827.t1 | AT5G16150 | 26.247 | 461 | 301 | 8 | 32 | 486 | 111 | 538 | 1.15e-41 | 157 |
MS.gene29827.t1 | AT5G16150 | 26.247 | 461 | 301 | 8 | 32 | 486 | 111 | 538 | 1.15e-41 | 157 |
MS.gene29827.t1 | AT5G16150 | 26.247 | 461 | 301 | 8 | 32 | 486 | 111 | 538 | 1.15e-41 | 157 |
MS.gene29827.t1 | AT5G17010 | 28.392 | 479 | 296 | 11 | 27 | 486 | 48 | 498 | 5.39e-41 | 154 |
MS.gene29827.t1 | AT5G17010 | 28.392 | 479 | 296 | 11 | 27 | 486 | 48 | 498 | 5.39e-41 | 154 |
MS.gene29827.t1 | AT5G17010 | 28.392 | 479 | 296 | 11 | 27 | 486 | 48 | 498 | 5.39e-41 | 154 |
MS.gene29827.t1 | AT2G20780 | 27.139 | 409 | 274 | 8 | 90 | 486 | 42 | 438 | 2.79e-40 | 152 |
MS.gene29827.t1 | AT5G59250 | 28.484 | 488 | 295 | 14 | 25 | 488 | 97 | 554 | 6.13e-40 | 152 |
MS.gene29827.t1 | AT1G08930 | 25.160 | 469 | 320 | 5 | 21 | 489 | 53 | 490 | 1.32e-39 | 150 |
MS.gene29827.t1 | AT1G08930 | 25.160 | 469 | 320 | 5 | 21 | 489 | 53 | 490 | 1.32e-39 | 150 |
MS.gene29827.t1 | AT1G08890 | 25.370 | 473 | 320 | 8 | 21 | 492 | 22 | 462 | 4.93e-39 | 148 |
MS.gene29827.t1 | AT5G27350 | 26.282 | 468 | 310 | 7 | 21 | 486 | 26 | 460 | 9.41e-39 | 147 |
MS.gene29827.t1 | AT1G08900 | 29.191 | 346 | 231 | 5 | 85 | 429 | 65 | 397 | 2.13e-38 | 145 |
MS.gene29827.t1 | AT3G05165 | 25.855 | 468 | 312 | 7 | 21 | 486 | 25 | 459 | 3.71e-38 | 145 |
MS.gene29827.t1 | AT3G05165 | 25.855 | 468 | 312 | 7 | 21 | 486 | 25 | 459 | 3.71e-38 | 145 |
MS.gene29827.t1 | AT3G05165 | 25.855 | 468 | 312 | 7 | 21 | 486 | 25 | 459 | 3.71e-38 | 145 |
MS.gene29827.t1 | AT1G30220 | 30.769 | 351 | 213 | 7 | 33 | 377 | 35 | 361 | 7.21e-38 | 147 |
MS.gene29827.t1 | AT3G05155 | 26.173 | 405 | 279 | 8 | 85 | 486 | 67 | 454 | 7.77e-38 | 144 |
MS.gene29827.t1 | AT3G05160 | 26.750 | 400 | 281 | 4 | 87 | 486 | 14 | 401 | 1.15e-37 | 143 |
MS.gene29827.t1 | AT3G05160 | 26.750 | 400 | 281 | 4 | 87 | 486 | 14 | 401 | 1.15e-37 | 143 |
MS.gene29827.t1 | AT3G05160 | 25.322 | 466 | 317 | 6 | 21 | 486 | 16 | 450 | 1.20e-37 | 144 |
MS.gene29827.t1 | AT1G54730 | 26.247 | 461 | 304 | 9 | 32 | 489 | 38 | 465 | 1.61e-37 | 144 |
MS.gene29827.t1 | AT3G05400 | 27.114 | 402 | 281 | 5 | 85 | 486 | 66 | 455 | 2.55e-37 | 143 |
MS.gene29827.t1 | AT3G03090 | 28.238 | 471 | 293 | 12 | 34 | 486 | 55 | 498 | 7.79e-37 | 142 |
MS.gene29827.t1 | AT2G43330 | 24.580 | 476 | 323 | 10 | 30 | 495 | 35 | 484 | 1.14e-35 | 139 |
MS.gene29827.t1 | AT4G04760 | 27.007 | 411 | 281 | 6 | 85 | 490 | 12 | 408 | 2.47e-35 | 137 |
MS.gene29827.t1 | AT4G04750 | 26.406 | 409 | 281 | 5 | 85 | 488 | 76 | 469 | 2.60e-35 | 138 |
MS.gene29827.t1 | AT4G04750 | 26.406 | 409 | 281 | 5 | 85 | 488 | 76 | 469 | 2.60e-35 | 138 |
MS.gene29827.t1 | AT4G04760 | 27.007 | 411 | 281 | 6 | 85 | 490 | 71 | 467 | 4.56e-35 | 137 |
MS.gene29827.t1 | AT5G18840 | 24.390 | 410 | 283 | 6 | 85 | 486 | 84 | 474 | 4.67e-35 | 137 |
MS.gene29827.t1 | AT3G05400 | 28.726 | 369 | 250 | 6 | 119 | 486 | 79 | 435 | 6.65e-35 | 136 |
MS.gene29827.t1 | AT4G04750 | 26.406 | 409 | 281 | 5 | 85 | 488 | 120 | 513 | 7.81e-35 | 137 |
MS.gene29827.t1 | AT3G05165 | 25.428 | 409 | 274 | 6 | 21 | 429 | 25 | 402 | 2.29e-34 | 135 |
MS.gene29827.t1 | AT3G05165 | 26.034 | 411 | 269 | 7 | 21 | 429 | 25 | 402 | 5.91e-34 | 134 |
MS.gene29827.t1 | AT3G05165 | 26.034 | 411 | 269 | 7 | 21 | 429 | 25 | 402 | 5.91e-34 | 134 |
MS.gene29827.t1 | AT5G27360 | 23.718 | 468 | 322 | 6 | 21 | 486 | 30 | 464 | 8.38e-34 | 134 |
MS.gene29827.t1 | AT1G54730 | 26.202 | 416 | 272 | 8 | 32 | 445 | 38 | 420 | 1.07e-33 | 132 |
MS.gene29827.t1 | AT1G54730 | 25.708 | 459 | 288 | 9 | 32 | 489 | 38 | 444 | 1.42e-33 | 132 |
MS.gene29827.t1 | AT5G27360 | 23.718 | 468 | 322 | 6 | 21 | 486 | 78 | 512 | 1.59e-33 | 134 |
MS.gene29827.t1 | AT3G05150 | 24.532 | 481 | 327 | 10 | 12 | 489 | 21 | 468 | 1.13e-32 | 130 |
MS.gene29827.t1 | AT3G05150 | 24.686 | 478 | 324 | 10 | 12 | 486 | 21 | 465 | 1.20e-32 | 130 |
MS.gene29827.t1 | AT3G05150 | 24.686 | 478 | 324 | 10 | 12 | 486 | 21 | 465 | 1.20e-32 | 130 |
MS.gene29827.t1 | AT4G16480 | 27.548 | 363 | 229 | 7 | 23 | 372 | 24 | 365 | 2.87e-32 | 130 |
MS.gene29827.t1 | AT4G16480 | 27.548 | 363 | 229 | 7 | 23 | 372 | 24 | 365 | 2.87e-32 | 130 |
MS.gene29827.t1 | AT4G16480 | 27.548 | 363 | 229 | 7 | 23 | 372 | 24 | 365 | 2.87e-32 | 130 |
MS.gene29827.t1 | AT4G04760 | 25.672 | 409 | 286 | 6 | 85 | 490 | 71 | 464 | 1.00e-31 | 127 |
MS.gene29827.t1 | AT5G27360 | 25.070 | 355 | 254 | 5 | 132 | 486 | 18 | 360 | 2.01e-30 | 122 |
MS.gene29827.t1 | AT5G27360 | 25.070 | 355 | 254 | 5 | 132 | 486 | 18 | 360 | 2.01e-30 | 122 |
MS.gene29827.t1 | AT1G54730 | 25.604 | 414 | 256 | 8 | 32 | 445 | 38 | 399 | 7.45e-30 | 121 |
MS.gene29827.t1 | AT1G79820 | 26.866 | 402 | 265 | 11 | 92 | 486 | 107 | 486 | 2.51e-29 | 121 |
MS.gene29827.t1 | AT1G79820 | 26.866 | 402 | 265 | 11 | 92 | 486 | 107 | 486 | 2.51e-29 | 121 |
MS.gene29827.t1 | AT1G67300 | 26.286 | 350 | 231 | 7 | 99 | 439 | 107 | 438 | 2.02e-28 | 118 |
MS.gene29827.t1 | AT2G48020 | 27.915 | 283 | 195 | 4 | 85 | 366 | 68 | 342 | 2.91e-28 | 116 |
MS.gene29827.t1 | AT1G54730 | 25.980 | 408 | 265 | 9 | 32 | 437 | 38 | 410 | 4.55e-28 | 116 |
MS.gene29827.t1 | AT1G54730 | 25.980 | 408 | 265 | 9 | 32 | 437 | 38 | 410 | 4.55e-28 | 116 |
MS.gene29827.t1 | AT1G67300 | 26.857 | 350 | 228 | 7 | 99 | 439 | 107 | 437 | 6.32e-28 | 117 |
MS.gene29827.t1 | AT1G67300 | 26.857 | 350 | 228 | 7 | 99 | 439 | 107 | 437 | 6.32e-28 | 117 |
MS.gene29827.t1 | AT2G48020 | 27.778 | 270 | 187 | 3 | 85 | 354 | 68 | 329 | 2.24e-27 | 113 |
MS.gene29827.t1 | AT1G67300 | 26.361 | 349 | 229 | 7 | 99 | 438 | 107 | 436 | 2.55e-27 | 114 |
MS.gene29827.t1 | AT1G67300 | 26.361 | 349 | 229 | 7 | 99 | 438 | 107 | 436 | 2.55e-27 | 114 |
MS.gene29827.t1 | AT3G20460 | 25.871 | 402 | 286 | 5 | 85 | 486 | 93 | 482 | 2.65e-27 | 115 |
MS.gene29827.t1 | AT2G35740 | 25.275 | 364 | 236 | 9 | 26 | 375 | 26 | 367 | 3.03e-27 | 115 |
MS.gene29827.t1 | AT3G05155 | 26.296 | 270 | 188 | 3 | 85 | 354 | 67 | 325 | 2.51e-26 | 109 |
MS.gene29827.t1 | AT1G67300 | 26.901 | 342 | 222 | 7 | 99 | 431 | 107 | 429 | 2.65e-26 | 111 |
MS.gene29827.t1 | AT1G67300 | 26.901 | 342 | 222 | 7 | 99 | 431 | 107 | 429 | 2.65e-26 | 111 |
MS.gene29827.t1 | AT1G05030 | 25.325 | 462 | 305 | 13 | 32 | 486 | 85 | 513 | 4.73e-26 | 112 |
MS.gene29827.t1 | AT1G79820 | 26.361 | 349 | 233 | 9 | 92 | 436 | 107 | 435 | 8.58e-26 | 110 |
MS.gene29827.t1 | AT1G54730 | 26.625 | 323 | 210 | 6 | 32 | 354 | 38 | 333 | 1.49e-25 | 107 |
MS.gene29827.t1 | AT1G08920 | 24.265 | 408 | 285 | 6 | 85 | 486 | 72 | 461 | 1.98e-25 | 109 |
MS.gene29827.t1 | AT1G05030 | 25.432 | 405 | 278 | 10 | 90 | 486 | 73 | 461 | 2.50e-25 | 109 |
MS.gene29827.t1 | AT1G54730 | 26.846 | 298 | 194 | 5 | 32 | 329 | 38 | 311 | 5.36e-25 | 105 |
MS.gene29827.t1 | AT1G54730 | 26.846 | 298 | 194 | 5 | 32 | 329 | 38 | 311 | 5.36e-25 | 105 |
MS.gene29827.t1 | AT1G54730 | 26.846 | 298 | 194 | 5 | 32 | 329 | 38 | 311 | 2.04e-24 | 105 |
MS.gene29827.t1 | AT1G08920 | 22.469 | 405 | 303 | 4 | 85 | 486 | 72 | 468 | 2.09e-24 | 106 |
MS.gene29827.t1 | AT5G27360 | 21.975 | 405 | 281 | 6 | 21 | 423 | 30 | 401 | 3.32e-23 | 102 |
MS.gene29827.t1 | AT1G08920 | 24.501 | 351 | 241 | 6 | 85 | 429 | 72 | 404 | 3.05e-22 | 99.8 |
MS.gene29827.t1 | AT5G17010 | 26.004 | 473 | 241 | 16 | 34 | 486 | 52 | 435 | 3.61e-22 | 99.4 |
MS.gene29827.t1 | AT3G51490 | 26.587 | 252 | 165 | 6 | 25 | 274 | 3 | 236 | 4.15e-20 | 94.4 |
MS.gene29827.t1 | AT3G51490 | 26.587 | 252 | 165 | 6 | 25 | 274 | 3 | 236 | 4.42e-20 | 94.4 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 2.93e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 2.93e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 2.93e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 3.29e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 3.29e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 3.29e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 3.29e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 3.29e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 3.29e-19 | 91.7 |
MS.gene29827.t1 | AT4G35300 | 32.086 | 187 | 123 | 4 | 90 | 274 | 52 | 236 | 3.29e-19 | 91.7 |
MS.gene29827.t1 | AT3G51490 | 28.877 | 187 | 129 | 4 | 90 | 274 | 2 | 186 | 3.34e-19 | 91.7 |
MS.gene29827.t1 | AT1G20840 | 28.436 | 211 | 141 | 4 | 78 | 279 | 30 | 239 | 8.15e-19 | 90.5 |
MS.gene29827.t1 | AT1G20840 | 28.436 | 211 | 141 | 4 | 78 | 279 | 30 | 239 | 8.15e-19 | 90.5 |
MS.gene29827.t1 | AT1G79820 | 24.000 | 400 | 231 | 10 | 92 | 486 | 107 | 438 | 2.76e-18 | 87.8 |
MS.gene29827.t1 | AT1G79820 | 23.352 | 364 | 210 | 9 | 128 | 486 | 77 | 376 | 1.35e-14 | 75.9 |
Find 113 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATATGACATTGGAATTTC+AGG | 0.174947 | 3.4:+72904822 | MS.gene29827:CDS |
CCTGTGGTTCTTATATTTAC+AGG | 0.188974 | 3.4:-72906461 | None:intergenic |
TTAAAAGCGCCTCGCCATTT+TGG | 0.225068 | 3.4:-72905589 | None:intergenic |
AAATATTCCCATGCTCATTC+TGG | 0.238795 | 3.4:+72905218 | MS.gene29827:CDS |
TGTTTATACTCTGCTGGTTT+TGG | 0.264387 | 3.4:+72906392 | MS.gene29827:CDS |
ATTGTTGGTGGTGCTATTAA+TGG | 0.274425 | 3.4:+72905186 | MS.gene29827:CDS |
GCTGCCTTCCTTAAAATATC+TGG | 0.289328 | 3.4:-72905003 | None:intergenic |
CTCTTCCATTCTGTGGGCTT+GGG | 0.292972 | 3.4:+72906024 | MS.gene29827:CDS |
CCTCTTCCATTCTGTGGGCT+TGG | 0.298443 | 3.4:+72906023 | MS.gene29827:CDS |
CCAGATGCTGCCATCAATAT+TGG | 0.323176 | 3.4:+72904735 | MS.gene29827:CDS |
CGAAGAATCTTGTTCATAAC+CGG | 0.330741 | 3.4:+72906138 | MS.gene29827:CDS |
CGAAGAAACGTCATCATAAT+AGG | 0.339968 | 3.4:+72905150 | MS.gene29827:CDS |
ATGTTATGTCACTTTAAGTT+TGG | 0.344402 | 3.4:+72906548 | MS.gene29827:CDS |
TATGGGGAAAACATTGGTTT+TGG | 0.349042 | 3.4:+72906672 | MS.gene29827:CDS |
ACATGCATCGTTGCTGCTTC+CGG | 0.358767 | 3.4:+72904786 | MS.gene29827:CDS |
CTATTATGTTTATACTCTGC+TGG | 0.362807 | 3.4:+72906386 | MS.gene29827:CDS |
CATTATGATGTTTGTCTGCT+TGG | 0.369746 | 3.4:+72906164 | MS.gene29827:CDS |
TATCTTGCCACCAATATTGA+TGG | 0.389773 | 3.4:-72904745 | None:intergenic |
TTAATTTCTGCCATTGTACT+TGG | 0.400667 | 3.4:+72906060 | MS.gene29827:CDS |
GCAGTGGTGTCTGGTGTTGA+TGG | 0.402312 | 3.4:+72906320 | MS.gene29827:CDS |
CTTCTTGTTCTATGCTGGTT+GGG | 0.406015 | 3.4:+72906574 | MS.gene29827:CDS |
CCTTCTTGTTCTATGCTGGT+TGG | 0.407272 | 3.4:+72906573 | MS.gene29827:CDS |
GGAGCCTTCTTGTTCTATGC+TGG | 0.408479 | 3.4:+72906569 | MS.gene29827:CDS |
AAAGCCTTACGCAAAATTAG+AGG | 0.410530 | 3.4:+72905811 | MS.gene29827:CDS |
CCACGTTCGACTAAGCTGTT+GGG | 0.414673 | 3.4:-72905769 | None:intergenic |
TGGATTCAATGTACACCATA+TGG | 0.418769 | 3.4:+72906654 | MS.gene29827:CDS |
ACGTCTTCTCTTTATCTAGC+TGG | 0.428341 | 3.4:+72905081 | MS.gene29827:CDS |
CCAATATTGATGGCAGCATC+TGG | 0.432816 | 3.4:-72904735 | None:intergenic |
GGTGGTGCCCTCTTTATTGT+TGG | 0.444551 | 3.4:+72905171 | MS.gene29827:CDS |
TGTTGATCCCGGTAAGTTGT+TGG | 0.450297 | 3.4:-72905978 | None:intergenic |
ACCACGTTCGACTAAGCTGT+TGG | 0.458442 | 3.4:-72905770 | None:intergenic |
ACCTAACCTCTTCCATTCTG+TGG | 0.461623 | 3.4:+72906017 | MS.gene29827:CDS |
AAGGGAATTCCTTTAGTCTC+AGG | 0.463134 | 3.4:-72906632 | None:intergenic |
GGAGTTGGTGTAGTCGCTGC+AGG | 0.467474 | 3.4:+72905634 | MS.gene29827:CDS |
CCTAACCTCTTCCATTCTGT+GGG | 0.469888 | 3.4:+72906018 | MS.gene29827:CDS |
CAACAAAACCGGCAGAGATA+AGG | 0.471435 | 3.4:-72906104 | None:intergenic |
GTGTCTAACCTTATCTCTGC+CGG | 0.472009 | 3.4:+72906096 | MS.gene29827:CDS |
CCCACAGAATGGAAGAGGTT+AGG | 0.476541 | 3.4:-72906018 | None:intergenic |
GGATTCAATGTACACCATAT+GGG | 0.477310 | 3.4:+72906655 | MS.gene29827:CDS |
GGTCGTGGGGCCCTCTAACA+TGG | 0.478479 | 3.4:+72906417 | MS.gene29827:CDS |
CTGTGGTTCTTATATTTACA+GGG | 0.480105 | 3.4:-72906460 | None:intergenic |
AATATTCCCATGCTCATTCT+GGG | 0.480123 | 3.4:+72905219 | MS.gene29827:CDS |
TACTAATATTGCATTCCCCT+TGG | 0.480612 | 3.4:-72906357 | None:intergenic |
ATTGTGCTAGCAGTGGTGTC+TGG | 0.481749 | 3.4:+72906311 | MS.gene29827:CDS |
GAAAGCGACGATGTTGATCC+CGG | 0.488081 | 3.4:-72905989 | None:intergenic |
CCTGCAGTTGTAATGACAAT+TGG | 0.493710 | 3.4:+72905724 | MS.gene29827:CDS |
ACCAAATCGATCAACAAAAC+CGG | 0.494702 | 3.4:-72906115 | None:intergenic |
CTTGGAATAAGCCATGTTAG+AGG | 0.494856 | 3.4:-72906428 | None:intergenic |
GGTGCCCTCTTTATTGTTGG+TGG | 0.497074 | 3.4:+72905174 | MS.gene29827:CDS |
TGGGGATGGAGACTCTCTCT+TGG | 0.498033 | 3.4:+72905688 | MS.gene29827:CDS |
CGATTTGTTAAAGGAGAAGA+TGG | 0.500703 | 3.4:+72906698 | MS.gene29827:CDS |
TCTCCATCCCCATGTGTGCT+TGG | 0.503665 | 3.4:-72905677 | None:intergenic |
AATAGCTATGCTTTGTCCTG+TGG | 0.505069 | 3.4:-72906477 | None:intergenic |
AGCAAAGTCACCGCGTGGTA+TGG | 0.506861 | 3.4:+72905126 | MS.gene29827:CDS |
TTAATAAGTTCTTCTAACTC+AGG | 0.509188 | 3.4:-72905853 | None:intergenic |
CCATCCCCATGTGTGCTTGG+CGG | 0.515790 | 3.4:-72905674 | None:intergenic |
TGAGACTAAAGGAATTCCCT+TGG | 0.516494 | 3.4:+72906634 | MS.gene29827:CDS |
GGGGAATGCAATATTAGTAT+TGG | 0.522711 | 3.4:+72906361 | MS.gene29827:CDS |
ACGGCACCGCCAAGCACACA+TGG | 0.525868 | 3.4:+72905668 | MS.gene29827:CDS |
AATTGGTTCCTTCCTCATAA+CGG | 0.526052 | 3.4:+72905741 | MS.gene29827:CDS |
TATGGTGTACATTGAATCCA+AGG | 0.528540 | 3.4:-72906651 | None:intergenic |
CGGTGACTTTGCTAGCTGCA+AGG | 0.530108 | 3.4:-72905116 | None:intergenic |
CCAATTGTCATTACAACTGC+AGG | 0.530129 | 3.4:-72905724 | None:intergenic |
TGGTGCTATTAATGGTGGTT+CGG | 0.531917 | 3.4:+72905194 | MS.gene29827:CDS |
CACGTTCGACTAAGCTGTTG+GGG | 0.538498 | 3.4:-72905768 | None:intergenic |
AAGAGAGTATCGACCTCACT+TGG | 0.538643 | 3.4:+72905930 | MS.gene29827:CDS |
CCGCCAAGCACACATGGGGA+TGG | 0.549134 | 3.4:+72905674 | MS.gene29827:CDS |
CCAAGCCCACAGAATGGAAG+AGG | 0.560247 | 3.4:-72906023 | None:intergenic |
AACACGACCCAGAATGAGCA+TGG | 0.561940 | 3.4:-72905226 | None:intergenic |
TAGCACCACCAACAATAAAG+AGG | 0.563652 | 3.4:-72905179 | None:intergenic |
GGTGACTTTGCTAGCTGCAA+GGG | 0.565981 | 3.4:-72905115 | None:intergenic |
TTTACAGGGAAAATCTCACT+TGG | 0.566699 | 3.4:-72906446 | None:intergenic |
TCTGTGGGCTTGGGACATGA+TGG | 0.566874 | 3.4:+72906033 | MS.gene29827:CDS |
CATGTCCCAAGCCCACAGAA+TGG | 0.569588 | 3.4:-72906029 | None:intergenic |
GTTGGTGGTGCTATTAATGG+TGG | 0.572136 | 3.4:+72905189 | MS.gene29827:CDS |
ACACCATATGGGGAAAACAT+TGG | 0.572553 | 3.4:+72906666 | MS.gene29827:CDS |
CCTGTAAATATAAGAACCAC+AGG | 0.573263 | 3.4:+72906461 | MS.gene29827:CDS |
GGCTGGTGGGGTATTTGCTG+TGG | 0.574846 | 3.4:+72904704 | MS.gene29827:CDS |
GATGCTGCCATCAATATTGG+TGG | 0.590546 | 3.4:+72904738 | MS.gene29827:CDS |
TTGGAATAAGCCATGTTAGA+GGG | 0.596308 | 3.4:-72906427 | None:intergenic |
GAAGAATCTTGTTCATAACC+GGG | 0.599176 | 3.4:+72906139 | MS.gene29827:CDS |
GACAAACATCATAATGCCCC+CGG | 0.601203 | 3.4:-72906157 | None:intergenic |
TAACTCAGGTTCAATATCAA+CGG | 0.603300 | 3.4:-72905839 | None:intergenic |
TGCATCGTTGCTGCTTCCGG+TGG | 0.604561 | 3.4:+72904789 | MS.gene29827:CDS |
AGCACCACCAACAATAAAGA+GGG | 0.605228 | 3.4:-72905178 | None:intergenic |
TGGTACAAATGACATATCCA+AGG | 0.605738 | 3.4:+72906340 | MS.gene29827:CDS |
CGGCACCGCCAAGCACACAT+GGG | 0.606397 | 3.4:+72905669 | MS.gene29827:CDS |
GTATCGACCTCACTTGGTGA+TGG | 0.608237 | 3.4:+72905936 | MS.gene29827:CDS |
GATTCAATGTACACCATATG+GGG | 0.610171 | 3.4:+72906656 | MS.gene29827:CDS |
GCGAATGCCATCACCAAGTG+AGG | 0.611968 | 3.4:-72905943 | None:intergenic |
CAGAGATAAGGTTAGACACA+AGG | 0.612076 | 3.4:-72906092 | None:intergenic |
GCAATTTCAGATAGATACAA+TGG | 0.614599 | 3.4:-72905562 | None:intergenic |
AAGGTTAGACACAAGGCTAA+CGG | 0.616354 | 3.4:-72906085 | None:intergenic |
GGTACAAATGACATATCCAA+GGG | 0.626581 | 3.4:+72906341 | MS.gene29827:CDS |
CCAACCAGCATAGAACAAGA+AGG | 0.632155 | 3.4:-72906573 | None:intergenic |
AAGAATCTTGTTCATAACCG+GGG | 0.636667 | 3.4:+72906140 | MS.gene29827:CDS |
GGCACCGCCAAGCACACATG+GGG | 0.639282 | 3.4:+72905670 | MS.gene29827:CDS |
ACACGACCCAGAATGAGCAT+GGG | 0.651983 | 3.4:-72905225 | None:intergenic |
CCCAACAGCTTAGTCGAACG+TGG | 0.654800 | 3.4:+72905769 | MS.gene29827:CDS |
TTCAGGAGGTGTCACAACGA+TGG | 0.658741 | 3.4:+72904957 | MS.gene29827:intron |
AGAATCTTGTTCATAACCGG+GGG | 0.669322 | 3.4:+72906141 | MS.gene29827:CDS |
CTCAGGTTCAATATCAACGG+AGG | 0.672066 | 3.4:-72905836 | None:intergenic |
TTCAGATAGATACAATGGTG+CGG | 0.672267 | 3.4:-72905557 | None:intergenic |
AGAAACGTCATCATAATAGG+TGG | 0.673000 | 3.4:+72905153 | MS.gene29827:CDS |
GCTGCAGGCTGCATAAACTA+CGG | 0.674975 | 3.4:+72905649 | MS.gene29827:CDS |
TGTGTCCATTGTGCTAGCAG+TGG | 0.678099 | 3.4:+72906304 | MS.gene29827:CDS |
AGACACCACTGCTAGCACAA+TGG | 0.679999 | 3.4:-72906309 | None:intergenic |
ATGGTGTACATTGAATCCAA+GGG | 0.688425 | 3.4:-72906650 | None:intergenic |
GCTAACGGATCCAAGTACAA+TGG | 0.704332 | 3.4:-72906070 | None:intergenic |
CAGCTAGCAAAGTCACCGCG+TGG | 0.728015 | 3.4:+72905121 | MS.gene29827:CDS |
ACGTTCGACTAAGCTGTTGG+GGG | 0.743564 | 3.4:-72905767 | None:intergenic |
GTACAAATGACATATCCAAG+GGG | 0.751900 | 3.4:+72906342 | MS.gene29827:CDS |
GTTTCTTCGACCATACCACG+CGG | 0.876756 | 3.4:-72905136 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTAATTCAAATATAATA+AGG | - | chr3.4:72904876-72904895 | None:intergenic | 10.0% |
!!! | AACAATTATTTTATGTAAAA+AGG | + | chr3.4:72905390-72905409 | MS.gene29827:intron | 10.0% |
!!! | TAAATAATTAGTTCTTAATT+TGG | + | chr3.4:72905308-72905327 | MS.gene29827:intron | 10.0% |
!! | ACACAAAAAATTTAATTAGT+AGG | - | chr3.4:72906266-72906285 | None:intergenic | 15.0% |
!!! | CTTTTTAATATGGTTTTAAA+GGG | - | chr3.4:72905913-72905932 | None:intergenic | 15.0% |
!!! | TCTTTTTAATATGGTTTTAA+AGG | - | chr3.4:72905914-72905933 | None:intergenic | 15.0% |
!!! | TTAATTATTATTTTACCAAC+AGG | + | chr3.4:72905534-72905553 | MS.gene29827:intron | 15.0% |
!! | AATGCAGTTGAAAATTTAAA+AGG | - | chr3.4:72905516-72905535 | None:intergenic | 20.0% |
!! | TACAACATTAATGATTGTTT+AGG | - | chr3.4:72905341-72905360 | None:intergenic | 20.0% |
!!! | AATTCTTTCCAGATATTTTA+AGG | + | chr3.4:72904995-72905014 | MS.gene29827:CDS | 20.0% |
!!! | TTTTATGTAAAAAGGAATAG+AGG | + | chr3.4:72905398-72905417 | MS.gene29827:intron | 20.0% |
! | TTAATAAGTTCTTCTAACTC+AGG | - | chr3.4:72905856-72905875 | None:intergenic | 25.0% |
!! | TCGATACTCTCTTTTTAATA+TGG | - | chr3.4:72905923-72905942 | None:intergenic | 25.0% |
!!! | ATGTTATGTCACTTTAAGTT+TGG | + | chr3.4:72906548-72906567 | MS.gene29827:CDS | 25.0% |
!!! | GGAAAGAATTTTTGAAGAAA+GGG | - | chr3.4:72904985-72905004 | None:intergenic | 25.0% |
!!! | TGGAAAGAATTTTTGAAGAA+AGG | - | chr3.4:72904986-72905005 | None:intergenic | 25.0% |
AACTCAAGACAATTATAGTG+AGG | - | chr3.4:72905461-72905480 | None:intergenic | 30.0% | |
CTATTATGTTTATACTCTGC+TGG | + | chr3.4:72906386-72906405 | MS.gene29827:CDS | 30.0% | |
CTGTGGTTCTTATATTTACA+GGG | - | chr3.4:72906463-72906482 | None:intergenic | 30.0% | |
GCAATTTCAGATAGATACAA+TGG | - | chr3.4:72905565-72905584 | None:intergenic | 30.0% | |
TAACTCAGGTTCAATATCAA+CGG | - | chr3.4:72905842-72905861 | None:intergenic | 30.0% | |
TTAATTTCTGCCATTGTACT+TGG | + | chr3.4:72906060-72906079 | MS.gene29827:CDS | 30.0% | |
TTGTGAAAATGTCGAATTTC+AGG | + | chr3.4:72904940-72904959 | MS.gene29827:intron | 30.0% | |
! | CTTCTTTTTGGATATGACAT+TGG | + | chr3.4:72904813-72904832 | MS.gene29827:CDS | 30.0% |
!! | CTTTCCAGATATTTTAAGGA+AGG | + | chr3.4:72904999-72905018 | MS.gene29827:CDS | 30.0% |
!! | TTTCAATTCTTTTTGGGAGT+TGG | + | chr3.4:72905619-72905638 | MS.gene29827:CDS | 30.0% |
!!! | AGTCGCAAAACACTTTTTTT+TGG | + | chr3.4:72905285-72905304 | MS.gene29827:intron | 30.0% |
!!! | TTTTGGTGTCGATTTGTTAA+AGG | + | chr3.4:72906689-72906708 | MS.gene29827:CDS | 30.0% |
AAAGCCTTACGCAAAATTAG+AGG | + | chr3.4:72905811-72905830 | MS.gene29827:CDS | 35.0% | |
AAATATTCCCATGCTCATTC+TGG | + | chr3.4:72905218-72905237 | MS.gene29827:CDS | 35.0% | |
AAGAATCTTGTTCATAACCG+GGG | + | chr3.4:72906140-72906159 | MS.gene29827:CDS | 35.0% | |
AATATTCCCATGCTCATTCT+GGG | + | chr3.4:72905219-72905238 | MS.gene29827:CDS | 35.0% | |
ACCAAATCGATCAACAAAAC+CGG | - | chr3.4:72906118-72906137 | None:intergenic | 35.0% | |
AGAAACGTCATCATAATAGG+TGG | + | chr3.4:72905153-72905172 | MS.gene29827:CDS | 35.0% | |
AGACAATTATAGTGAGGTAG+AGG | - | chr3.4:72905455-72905474 | None:intergenic | 35.0% | |
ATATCCAAAAAGAAGACCAC+CGG | - | chr3.4:72904808-72904827 | None:intergenic | 35.0% | |
ATGGTGTACATTGAATCCAA+GGG | - | chr3.4:72906653-72906672 | None:intergenic | 35.0% | |
CATTATGATGTTTGTCTGCT+TGG | + | chr3.4:72906164-72906183 | MS.gene29827:CDS | 35.0% | |
CCTGTAAATATAAGAACCAC+AGG | + | chr3.4:72906461-72906480 | MS.gene29827:CDS | 35.0% | |
CCTGTGGTTCTTATATTTAC+AGG | - | chr3.4:72906464-72906483 | None:intergenic | 35.0% | |
CGAAGAAACGTCATCATAAT+AGG | + | chr3.4:72905150-72905169 | MS.gene29827:CDS | 35.0% | |
CGAAGAATCTTGTTCATAAC+CGG | + | chr3.4:72906138-72906157 | MS.gene29827:CDS | 35.0% | |
GAAGAATCTTGTTCATAACC+GGG | + | chr3.4:72906139-72906158 | MS.gene29827:CDS | 35.0% | |
GATTCAATGTACACCATATG+GGG | + | chr3.4:72906656-72906675 | MS.gene29827:CDS | 35.0% | |
GGATATGACATTGGAATTTC+AGG | + | chr3.4:72904822-72904841 | MS.gene29827:CDS | 35.0% | |
GGATTCAATGTACACCATAT+GGG | + | chr3.4:72906655-72906674 | MS.gene29827:CDS | 35.0% | |
GGGGAATGCAATATTAGTAT+TGG | + | chr3.4:72906361-72906380 | MS.gene29827:CDS | 35.0% | |
GGTACAAATGACATATCCAA+GGG | + | chr3.4:72906341-72906360 | MS.gene29827:CDS | 35.0% | |
GTACAAATGACATATCCAAG+GGG | + | chr3.4:72906342-72906361 | MS.gene29827:CDS | 35.0% | |
TACTAATATTGCATTCCCCT+TGG | - | chr3.4:72906360-72906379 | None:intergenic | 35.0% | |
TAGAGGTAAAACGAACATGA+GGG | - | chr3.4:72905438-72905457 | None:intergenic | 35.0% | |
TATCTTGCCACCAATATTGA+TGG | - | chr3.4:72904748-72904767 | None:intergenic | 35.0% | |
TATGGTGTACATTGAATCCA+AGG | - | chr3.4:72906654-72906673 | None:intergenic | 35.0% | |
TCCCAAAAAGAATTGAAAGC+CGG | - | chr3.4:72905617-72905636 | None:intergenic | 35.0% | |
TGAAAATGTCGAATTTCAGG+AGG | + | chr3.4:72904943-72904962 | MS.gene29827:intron | 35.0% | |
TGGATTCAATGTACACCATA+TGG | + | chr3.4:72906654-72906673 | MS.gene29827:CDS | 35.0% | |
TGGTACAAATGACATATCCA+AGG | + | chr3.4:72906340-72906359 | MS.gene29827:CDS | 35.0% | |
TTCAGATAGATACAATGGTG+CGG | - | chr3.4:72905560-72905579 | None:intergenic | 35.0% | |
TTGGAATAAGCCATGTTAGA+GGG | - | chr3.4:72906430-72906449 | None:intergenic | 35.0% | |
TTTACAGGGAAAATCTCACT+TGG | - | chr3.4:72906449-72906468 | None:intergenic | 35.0% | |
! | AAACCAATGTTTTCCCCATA+TGG | - | chr3.4:72906672-72906691 | None:intergenic | 35.0% |
! | AATTGGTTCCTTCCTCATAA+CGG | + | chr3.4:72905741-72905760 | MS.gene29827:CDS | 35.0% |
! | TTTTTCTTGCCTGAGACTAA+AGG | + | chr3.4:72906623-72906642 | MS.gene29827:CDS | 35.0% |
!! | ACCGGCTTTCAATTCTTTTT+GGG | + | chr3.4:72905613-72905632 | MS.gene29827:CDS | 35.0% |
!! | ATTGTTGGTGGTGCTATTAA+TGG | + | chr3.4:72905186-72905205 | MS.gene29827:CDS | 35.0% |
!! | CGATTTGTTAAAGGAGAAGA+TGG | + | chr3.4:72906698-72906717 | MS.gene29827:CDS | 35.0% |
!!! | TACCGGCTTTCAATTCTTTT+TGG | + | chr3.4:72905612-72905631 | MS.gene29827:CDS | 35.0% |
!!! | TATGGGGAAAACATTGGTTT+TGG | + | chr3.4:72906672-72906691 | MS.gene29827:CDS | 35.0% |
!!! | TGTTTATACTCTGCTGGTTT+TGG | + | chr3.4:72906392-72906411 | MS.gene29827:CDS | 35.0% |
AAGGGAATTCCTTTAGTCTC+AGG | - | chr3.4:72906635-72906654 | None:intergenic | 40.0% | |
AAGGTTAGACACAAGGCTAA+CGG | - | chr3.4:72906088-72906107 | None:intergenic | 40.0% | |
AATAGCTATGCTTTGTCCTG+TGG | - | chr3.4:72906480-72906499 | None:intergenic | 40.0% | |
ACACCATATGGGGAAAACAT+TGG | + | chr3.4:72906666-72906685 | MS.gene29827:CDS | 40.0% | |
ACGTCTTCTCTTTATCTAGC+TGG | + | chr3.4:72905081-72905100 | MS.gene29827:CDS | 40.0% | |
AGAATCTTGTTCATAACCGG+GGG | + | chr3.4:72906141-72906160 | MS.gene29827:CDS | 40.0% | |
AGAGGTAAAACGAACATGAG+GGG | - | chr3.4:72905437-72905456 | None:intergenic | 40.0% | |
AGCACCACCAACAATAAAGA+GGG | - | chr3.4:72905181-72905200 | None:intergenic | 40.0% | |
CAGAGATAAGGTTAGACACA+AGG | - | chr3.4:72906095-72906114 | None:intergenic | 40.0% | |
CCAATTGTCATTACAACTGC+AGG | - | chr3.4:72905727-72905746 | None:intergenic | 40.0% | |
CCGGTAAGTTGTTGGAAAAA+CGG | - | chr3.4:72905973-72905992 | None:intergenic | 40.0% | |
CCTGCAGTTGTAATGACAAT+TGG | + | chr3.4:72905724-72905743 | MS.gene29827:CDS | 40.0% | |
CGGTAAGTTGTTGGAAAAAC+GGG | - | chr3.4:72905972-72905991 | None:intergenic | 40.0% | |
CTTGGAATAAGCCATGTTAG+AGG | - | chr3.4:72906431-72906450 | None:intergenic | 40.0% | |
GCTGCCTTCCTTAAAATATC+TGG | - | chr3.4:72905006-72905025 | None:intergenic | 40.0% | |
GTAGAGGTAAAACGAACATG+AGG | - | chr3.4:72905439-72905458 | None:intergenic | 40.0% | |
TAGCACCACCAACAATAAAG+AGG | - | chr3.4:72905182-72905201 | None:intergenic | 40.0% | |
TGAGACTAAAGGAATTCCCT+TGG | + | chr3.4:72906634-72906653 | MS.gene29827:CDS | 40.0% | |
! | ATTCTGGGTCGTGTTTTTCT+TGG | + | chr3.4:72905234-72905253 | MS.gene29827:CDS | 40.0% |
! | CGTTTTTCCAACAACTTACC+GGG | + | chr3.4:72905971-72905990 | MS.gene29827:CDS | 40.0% |
! | CTTCTTGTTCTATGCTGGTT+GGG | + | chr3.4:72906574-72906593 | MS.gene29827:CDS | 40.0% |
! | GGATCCTCTAATTTTGCGTA+AGG | - | chr3.4:72905818-72905837 | None:intergenic | 40.0% |
! | GTCGTGTTTTTCTTGGGTTT+GGG | + | chr3.4:72905241-72905260 | MS.gene29827:CDS | 40.0% |
! | TCGTGTTTTTCTTGGGTTTG+GGG | + | chr3.4:72905242-72905261 | MS.gene29827:CDS | 40.0% |
! | TTCTGGGTCGTGTTTTTCTT+GGG | + | chr3.4:72905235-72905254 | MS.gene29827:CDS | 40.0% |
!! | CCGTTTTTCCAACAACTTAC+CGG | + | chr3.4:72905970-72905989 | MS.gene29827:CDS | 40.0% |
!! | GATATTTTAAGGAAGGCAGC+TGG | + | chr3.4:72905006-72905025 | MS.gene29827:CDS | 40.0% |
!! | TGGTGCTATTAATGGTGGTT+CGG | + | chr3.4:72905194-72905213 | MS.gene29827:CDS | 40.0% |
!!! | TATACTCTGCTGGTTTTGGT+TGG | + | chr3.4:72906396-72906415 | MS.gene29827:CDS | 40.0% |
ACCTAACCTCTTCCATTCTG+TGG | + | chr3.4:72906017-72906036 | MS.gene29827:CDS | 45.0% | |
CAACAAAACCGGCAGAGATA+AGG | - | chr3.4:72906107-72906126 | None:intergenic | 45.0% | |
CCAACCAGCATAGAACAAGA+AGG | - | chr3.4:72906576-72906595 | None:intergenic | 45.0% | |
CCAGATGCTGCCATCAATAT+TGG | + | chr3.4:72904735-72904754 | MS.gene29827:CDS | 45.0% | |
CCTAACCTCTTCCATTCTGT+GGG | + | chr3.4:72906018-72906037 | MS.gene29827:CDS | 45.0% | |
CCTTCTTGTTCTATGCTGGT+TGG | + | chr3.4:72906573-72906592 | MS.gene29827:CDS | 45.0% | |
CTCAGGTTCAATATCAACGG+AGG | - | chr3.4:72905839-72905858 | None:intergenic | 45.0% | |
CTGAAATTGCTCCCCCAAAA+TGG | + | chr3.4:72905575-72905594 | MS.gene29827:CDS | 45.0% | |
GACAAACATCATAATGCCCC+CGG | - | chr3.4:72906160-72906179 | None:intergenic | 45.0% | |
GATGCTGCCATCAATATTGG+TGG | + | chr3.4:72904738-72904757 | MS.gene29827:CDS | 45.0% | |
GTGTCTAACCTTATCTCTGC+CGG | + | chr3.4:72906096-72906115 | MS.gene29827:CDS | 45.0% | |
TGTTGATCCCGGTAAGTTGT+TGG | - | chr3.4:72905981-72906000 | None:intergenic | 45.0% | |
! | CCAATATTGATGGCAGCATC+TGG | - | chr3.4:72904738-72904757 | None:intergenic | 45.0% |
! | GCTAACGGATCCAAGTACAA+TGG | - | chr3.4:72906073-72906092 | None:intergenic | 45.0% |
! | GGTCGTGTTTTTCTTGGGTT+TGG | + | chr3.4:72905240-72905259 | MS.gene29827:CDS | 45.0% |
!! | AAGAGAGTATCGACCTCACT+TGG | + | chr3.4:72905930-72905949 | MS.gene29827:CDS | 45.0% |
!! | GTTGGTGGTGCTATTAATGG+TGG | + | chr3.4:72905189-72905208 | MS.gene29827:CDS | 45.0% |
!! | GTTTTTCTTGGGTTTGGGGT+CGG | + | chr3.4:72905246-72905265 | MS.gene29827:CDS | 45.0% |
!!! | GCCGGTTTTGTTGATCGATT+TGG | + | chr3.4:72906114-72906133 | MS.gene29827:CDS | 45.0% |
!!! | TAAAAGCGCCTCGCCATTTT+GGG | - | chr3.4:72905591-72905610 | None:intergenic | 45.0% |
!!! | TTAAAAGCGCCTCGCCATTT+TGG | - | chr3.4:72905592-72905611 | None:intergenic | 45.0% |
!! | TTTAAAAAACAAAAAAAAAA+AGG | - | chr3.4:72905489-72905508 | None:intergenic | 5.0% |
AACACGACCCAGAATGAGCA+TGG | - | chr3.4:72905229-72905248 | None:intergenic | 50.0% | |
ACACGACCCAGAATGAGCAT+GGG | - | chr3.4:72905228-72905247 | None:intergenic | 50.0% | |
ACCACGTTCGACTAAGCTGT+TGG | - | chr3.4:72905773-72905792 | None:intergenic | 50.0% | |
ACGTTCGACTAAGCTGTTGG+GGG | - | chr3.4:72905770-72905789 | None:intergenic | 50.0% | |
AGACACCACTGCTAGCACAA+TGG | - | chr3.4:72906312-72906331 | None:intergenic | 50.0% | |
ATTGTGCTAGCAGTGGTGTC+TGG | + | chr3.4:72906311-72906330 | MS.gene29827:CDS | 50.0% | |
CACGTTCGACTAAGCTGTTG+GGG | - | chr3.4:72905771-72905790 | None:intergenic | 50.0% | |
CCACGTTCGACTAAGCTGTT+GGG | - | chr3.4:72905772-72905791 | None:intergenic | 50.0% | |
CCCACAGAATGGAAGAGGTT+AGG | - | chr3.4:72906021-72906040 | None:intergenic | 50.0% | |
CTCTTCCATTCTGTGGGCTT+GGG | + | chr3.4:72906024-72906043 | MS.gene29827:CDS | 50.0% | |
GAAAGCGACGATGTTGATCC+CGG | - | chr3.4:72905992-72906011 | None:intergenic | 50.0% | |
GCTGCAGGCTGCATAAACTA+CGG | + | chr3.4:72905649-72905668 | MS.gene29827:CDS | 50.0% | |
GGAGCCTTCTTGTTCTATGC+TGG | + | chr3.4:72906569-72906588 | MS.gene29827:CDS | 50.0% | |
GGTGACTTTGCTAGCTGCAA+GGG | - | chr3.4:72905118-72905137 | None:intergenic | 50.0% | |
GGTGCCCTCTTTATTGTTGG+TGG | + | chr3.4:72905174-72905193 | MS.gene29827:CDS | 50.0% | |
GGTGGTGCCCTCTTTATTGT+TGG | + | chr3.4:72905171-72905190 | MS.gene29827:CDS | 50.0% | |
GTTTCTTCGACCATACCACG+CGG | - | chr3.4:72905139-72905158 | None:intergenic | 50.0% | |
TGTGTCCATTGTGCTAGCAG+TGG | + | chr3.4:72906304-72906323 | MS.gene29827:CDS | 50.0% | |
! | ACATGCATCGTTGCTGCTTC+CGG | + | chr3.4:72904786-72904805 | MS.gene29827:CDS | 50.0% |
! | GCTTCCGGTGGTCTTCTTTT+TGG | + | chr3.4:72904801-72904820 | MS.gene29827:CDS | 50.0% |
! | GTATCGACCTCACTTGGTGA+TGG | + | chr3.4:72905936-72905955 | MS.gene29827:CDS | 50.0% |
!! | TGGCGAGGCGCTTTTAATAC+CGG | + | chr3.4:72905595-72905614 | MS.gene29827:CDS | 50.0% |
!! | TTCAGGAGGTGTCACAACGA+TGG | + | chr3.4:72904957-72904976 | MS.gene29827:intron | 50.0% |
!!! | AAAAGCGCCTCGCCATTTTG+GGG | - | chr3.4:72905590-72905609 | None:intergenic | 50.0% |
!!! | TGCTGGTTTTGGTTGGTCGT+GGG | + | chr3.4:72906403-72906422 | MS.gene29827:CDS | 50.0% |
AGCAAAGTCACCGCGTGGTA+TGG | + | chr3.4:72905126-72905145 | MS.gene29827:CDS | 55.0% | |
ATTGCTCCCCCAAAATGGCG+AGG | + | chr3.4:72905580-72905599 | MS.gene29827:CDS | 55.0% | |
CATGTCCCAAGCCCACAGAA+TGG | - | chr3.4:72906032-72906051 | None:intergenic | 55.0% | |
CCAAGCCCACAGAATGGAAG+AGG | - | chr3.4:72906026-72906045 | None:intergenic | 55.0% | |
CCCAACAGCTTAGTCGAACG+TGG | + | chr3.4:72905769-72905788 | MS.gene29827:CDS | 55.0% | |
CCTCTTCCATTCTGTGGGCT+TGG | + | chr3.4:72906023-72906042 | MS.gene29827:CDS | 55.0% | |
CGGTGACTTTGCTAGCTGCA+AGG | - | chr3.4:72905119-72905138 | None:intergenic | 55.0% | |
GATACAATGGTGCGGCCTGT+TGG | - | chr3.4:72905552-72905571 | None:intergenic | 55.0% | |
GCGAATGCCATCACCAAGTG+AGG | - | chr3.4:72905946-72905965 | None:intergenic | 55.0% | |
TCTCCATCCCCATGTGTGCT+TGG | - | chr3.4:72905680-72905699 | None:intergenic | 55.0% | |
TCTGTGGGCTTGGGACATGA+TGG | + | chr3.4:72906033-72906052 | MS.gene29827:CDS | 55.0% | |
TGGGGATGGAGACTCTCTCT+TGG | + | chr3.4:72905688-72905707 | MS.gene29827:CDS | 55.0% | |
! | GCAGTGGTGTCTGGTGTTGA+TGG | + | chr3.4:72906320-72906339 | MS.gene29827:CDS | 55.0% |
!! | AAAGCGCCTCGCCATTTTGG+GGG | - | chr3.4:72905589-72905608 | None:intergenic | 55.0% |
!! | TGTTGGGGGTGTCCGTTATG+AGG | - | chr3.4:72905756-72905775 | None:intergenic | 55.0% |
!!! | CTGCTGGTTTTGGTTGGTCG+TGG | + | chr3.4:72906402-72906421 | MS.gene29827:CDS | 55.0% |
!!! | GCTGGTTTTGGTTGGTCGTG+GGG | + | chr3.4:72906404-72906423 | MS.gene29827:CDS | 55.0% |
CAGCTAGCAAAGTCACCGCG+TGG | + | chr3.4:72905121-72905140 | MS.gene29827:CDS | 60.0% | |
CCATCCCCATGTGTGCTTGG+CGG | - | chr3.4:72905677-72905696 | None:intergenic | 60.0% | |
! | GGCTGGTGGGGTATTTGCTG+TGG | + | chr3.4:72904704-72904723 | MS.gene29827:CDS | 60.0% |
! | TGCATCGTTGCTGCTTCCGG+TGG | + | chr3.4:72904789-72904808 | MS.gene29827:CDS | 60.0% |
!! | GGAGTTGGTGTAGTCGCTGC+AGG | + | chr3.4:72905634-72905653 | MS.gene29827:CDS | 60.0% |
!! | GGGGGTGTCCGTTATGAGGA+AGG | - | chr3.4:72905752-72905771 | None:intergenic | 60.0% |
ACGGCACCGCCAAGCACACA+TGG | + | chr3.4:72905668-72905687 | MS.gene29827:CDS | 65.0% | |
CCGCCAAGCACACATGGGGA+TGG | + | chr3.4:72905674-72905693 | MS.gene29827:CDS | 65.0% | |
CGGCACCGCCAAGCACACAT+GGG | + | chr3.4:72905669-72905688 | MS.gene29827:CDS | 65.0% | |
GGCACCGCCAAGCACACATG+GGG | + | chr3.4:72905670-72905689 | MS.gene29827:CDS | 65.0% | |
GGTCGTGGGGCCCTCTAACA+TGG | + | chr3.4:72906417-72906436 | MS.gene29827:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 72904702 | 72906739 | 72904702 | ID=MS.gene29827 |
chr3.4 | mRNA | 72904702 | 72906739 | 72904702 | ID=MS.gene29827.t1;Parent=MS.gene29827 |
chr3.4 | exon | 72904702 | 72904843 | 72904702 | ID=MS.gene29827.t1.exon1;Parent=MS.gene29827.t1 |
chr3.4 | CDS | 72904702 | 72904843 | 72904702 | ID=cds.MS.gene29827.t1;Parent=MS.gene29827.t1 |
chr3.4 | exon | 72904962 | 72905281 | 72904962 | ID=MS.gene29827.t1.exon2;Parent=MS.gene29827.t1 |
chr3.4 | CDS | 72904962 | 72905281 | 72904962 | ID=cds.MS.gene29827.t1;Parent=MS.gene29827.t1 |
chr3.4 | exon | 72905556 | 72906185 | 72905556 | ID=MS.gene29827.t1.exon3;Parent=MS.gene29827.t1 |
chr3.4 | CDS | 72905556 | 72906185 | 72905556 | ID=cds.MS.gene29827.t1;Parent=MS.gene29827.t1 |
chr3.4 | exon | 72906299 | 72906739 | 72906299 | ID=MS.gene29827.t1.exon4;Parent=MS.gene29827.t1 |
chr3.4 | CDS | 72906299 | 72906739 | 72906299 | ID=cds.MS.gene29827.t1;Parent=MS.gene29827.t1 |
Gene Sequence |
Protein sequence |