AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52369


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52369.t1 MTR_3g074390 88.477 512 57 1 1 510 1 512 0.0 920
MS.gene52369.t1 MTR_3g074410 80.980 510 96 1 1 510 1 509 0.0 852
MS.gene52369.t1 MTR_3g074380 94.536 366 20 0 1 366 1 366 0.0 698
MS.gene52369.t1 MTR_3g074270 66.135 502 146 4 1 502 1 478 0.0 682
MS.gene52369.t1 MTR_3g008160 51.992 502 232 7 12 508 9 506 0.0 543
MS.gene52369.t1 MTR_3g074340 77.709 323 72 0 188 510 18 340 0.0 532
MS.gene52369.t1 MTR_3g074320 77.399 323 73 0 188 510 18 340 0.0 531
MS.gene52369.t1 MTR_3g074370 77.709 323 72 0 188 510 18 340 0.0 530
MS.gene52369.t1 MTR_5g006070 50.505 495 233 8 20 508 16 504 0.0 530
MS.gene52369.t1 MTR_0204s0020 51.134 485 232 4 15 498 10 490 0.0 526
MS.gene52369.t1 MTR_3g008170 52.323 495 228 6 10 500 8 498 0.0 524
MS.gene52369.t1 MTR_3g074400 62.889 450 113 5 53 481 1 417 0.0 523
MS.gene52369.t1 MTR_5g094760 52.410 498 231 5 1 496 1 494 1.51e-180 516
MS.gene52369.t1 MTR_0204s0020 50.515 485 232 5 15 498 10 487 2.89e-180 515
MS.gene52369.t1 MTR_7g091690 53.347 478 218 4 20 496 21 494 8.41e-179 512
MS.gene52369.t1 MTR_4g116790 50.309 485 236 4 20 503 21 501 1.84e-174 501
MS.gene52369.t1 MTR_0204s0040 50.209 478 233 4 20 496 23 496 5.17e-174 500
MS.gene52369.t1 MTR_5g082540 50.101 493 239 4 20 507 17 507 5.38e-174 500
MS.gene52369.t1 MTR_3g008160 51.627 461 214 7 53 508 1 457 3.00e-173 496
MS.gene52369.t1 MTR_0009s0370 47.619 504 257 5 8 506 3 504 5.22e-172 495
MS.gene52369.t1 MTR_1g038630 49.068 483 242 3 20 500 17 497 6.93e-172 494
MS.gene52369.t1 MTR_4g116770 50.209 478 233 4 20 496 219 692 1.44e-171 501
MS.gene52369.t1 MTR_5g041550 48.249 514 256 6 1 509 1 509 2.73e-170 491
MS.gene52369.t1 MTR_3g093010 48.343 513 254 6 1 508 1 507 4.39e-168 485
MS.gene52369.t1 MTR_5g006070 48.913 460 225 7 53 506 1 456 5.55e-168 483
MS.gene52369.t1 MTR_1g104770 46.640 506 259 7 1 501 1 500 6.59e-167 481
MS.gene52369.t1 MTR_1g104750 46.640 506 258 8 1 501 1 499 5.77e-165 476
MS.gene52369.t1 MTR_1g104780 48.326 478 237 7 32 503 28 501 1.50e-164 476
MS.gene52369.t1 MTR_3g023480 46.707 501 260 5 13 508 8 506 1.87e-164 476
MS.gene52369.t1 MTR_4g091370 50.920 489 234 5 20 504 17 503 2.81e-164 476
MS.gene52369.t1 MTR_6g087040 46.394 513 267 8 1 509 1 509 3.75e-161 467
MS.gene52369.t1 MTR_6g088375 46.394 513 267 8 1 509 1 509 3.75e-161 467
MS.gene52369.t1 MTR_8g102860 46.964 494 254 7 21 510 21 510 1.19e-160 466
MS.gene52369.t1 MTR_1g038600 46.985 481 237 4 20 500 17 479 3.62e-158 459
MS.gene52369.t1 MTR_3g007910 46.032 504 233 8 1 501 1 468 2.07e-155 451
MS.gene52369.t1 MTR_4g090600 50.507 493 237 6 20 508 17 506 1.30e-153 448
MS.gene52369.t1 MTR_3g093060 47.241 453 231 5 53 499 1 451 3.48e-150 437
MS.gene52369.t1 MTR_8g102860 46.104 462 241 7 53 510 1 458 1.37e-146 428
MS.gene52369.t1 MTR_4g116790 49.856 347 171 3 20 365 21 365 2.72e-118 353
MS.gene52369.t1 MTR_3g074330 73.913 161 32 2 1 154 1 158 3.90e-72 227
MS.gene52369.t1 MTR_3g074360 73.913 161 32 2 1 154 1 158 3.90e-72 227
MS.gene52369.t1 MTR_3g074310 73.292 161 33 2 1 154 1 158 2.08e-71 225
MS.gene52369.t1 MTR_4g072030 30.041 486 294 10 30 494 31 491 1.11e-57 200
MS.gene52369.t1 MTR_6g088450 30.652 460 287 9 31 480 63 500 1.38e-56 197
MS.gene52369.t1 MTR_4g069500 28.200 500 313 9 30 508 34 508 1.41e-56 197
MS.gene52369.t1 MTR_4g069500 29.724 434 278 7 96 508 31 458 3.02e-56 195
MS.gene52369.t1 MTR_8g103500 27.572 486 317 9 17 490 9 471 4.12e-53 187
MS.gene52369.t1 MTR_8g077890 30.612 490 285 12 31 493 24 485 8.70e-53 186
MS.gene52369.t1 MTR_3g116240 27.273 484 309 7 30 492 32 493 4.61e-51 182
MS.gene52369.t1 MTR_2g013310 29.536 474 298 10 27 490 53 500 7.77e-51 181
MS.gene52369.t1 MTR_2g013310 30.318 409 269 6 91 490 26 427 3.13e-50 178
MS.gene52369.t1 MTR_5g075300 27.664 488 302 10 31 493 24 485 4.21e-47 171
MS.gene52369.t1 MTR_8g077310 26.609 466 316 5 21 486 42 481 1.01e-46 169
MS.gene52369.t1 MTR_4g077740 28.361 476 300 13 27 486 46 496 1.08e-45 167
MS.gene52369.t1 MTR_5g096000 48.913 184 72 2 1 184 1 162 1.85e-45 162
MS.gene52369.t1 MTR_5g096000 46.622 148 74 2 359 501 152 299 1.19e-32 127
MS.gene52369.t1 MTR_7g446340 25.904 498 320 13 23 507 51 512 2.27e-45 167
MS.gene52369.t1 MTR_6g007340 25.904 498 320 13 23 507 51 512 2.27e-45 167
MS.gene52369.t1 MTR_8g077310 27.621 391 276 2 96 486 1 384 2.91e-45 163
MS.gene52369.t1 MTR_8g077300 27.764 407 277 4 85 486 79 473 2.65e-44 163
MS.gene52369.t1 MTR_6g018790 26.427 473 309 8 20 486 99 538 2.55e-42 159
MS.gene52369.t1 MTR_7g094450 27.981 411 276 8 82 488 77 471 3.32e-42 157
MS.gene52369.t1 MTR_5g020270 26.667 465 313 7 23 486 47 484 9.92e-42 156
MS.gene52369.t1 MTR_5g020270 28.316 392 272 4 96 486 1 384 2.05e-41 153
MS.gene52369.t1 MTR_1g116660 26.552 467 316 8 32 493 41 485 7.19e-41 154
MS.gene52369.t1 MTR_7g082270 26.134 463 299 9 32 486 71 498 2.75e-40 152
MS.gene52369.t1 MTR_2g020710 26.585 410 272 7 86 486 1 390 4.65e-40 149
MS.gene52369.t1 MTR_2g020710 24.696 494 318 10 8 486 25 479 9.12e-40 150
MS.gene52369.t1 MTR_5g019870 27.315 432 277 10 93 493 57 482 1.03e-39 150
MS.gene52369.t1 MTR_4g118610 25.806 403 286 5 85 486 92 482 1.13e-38 147
MS.gene52369.t1 MTR_2g049020 29.885 348 213 6 33 370 33 359 1.95e-38 148
MS.gene52369.t1 MTR_7g094110 28.571 406 270 8 85 486 82 471 4.65e-38 145
MS.gene52369.t1 MTR_3g084110 23.941 472 320 9 33 493 35 478 8.23e-38 145
MS.gene52369.t1 MTR_7g005910 25.478 471 315 10 32 493 39 482 2.18e-37 144
MS.gene52369.t1 MTR_1g022315 25.628 398 276 4 96 486 1 385 2.61e-37 142
MS.gene52369.t1 MTR_1g022315 25.672 409 284 4 85 486 89 484 3.55e-37 143
MS.gene52369.t1 MTR_1g116650 26.695 472 306 12 28 493 78 515 4.80e-37 144
MS.gene52369.t1 MTR_5g077580 24.645 564 307 12 33 505 33 569 2.00e-36 142
MS.gene52369.t1 MTR_7g082270 25.672 409 266 7 32 435 71 446 6.22e-36 139
MS.gene52369.t1 MTR_2g048720 29.326 341 219 6 33 368 33 356 1.50e-35 140
MS.gene52369.t1 MTR_7g113960 24.569 464 311 7 26 486 27 454 1.84e-35 138
MS.gene52369.t1 MTR_0064s0040 50.000 136 55 2 20 154 18 141 7.39e-34 125
MS.gene52369.t1 MTR_7g113970 23.769 467 315 8 25 486 61 491 7.49e-34 134
MS.gene52369.t1 MTR_5g020270 24.946 465 300 8 23 486 47 463 1.14e-33 133
MS.gene52369.t1 MTR_4g069500 28.000 325 209 6 203 508 1 319 1.16e-33 130
MS.gene52369.t1 MTR_8g077310 26.074 349 232 5 21 369 42 364 3.78e-32 127
MS.gene52369.t1 MTR_7g094110 27.407 405 256 8 85 486 82 451 3.33e-31 126
MS.gene52369.t1 MTR_4g013205 26.963 382 258 7 110 486 103 468 5.54e-31 125
MS.gene52369.t1 MTR_2g026160 27.841 352 228 6 33 375 34 368 2.23e-29 122
MS.gene52369.t1 MTR_3g080240 26.134 463 302 13 31 486 98 527 8.14e-29 120
MS.gene52369.t1 MTR_1g038620 36.875 160 82 3 204 363 50 190 1.16e-28 112
MS.gene52369.t1 MTR_6g087910 24.211 380 271 6 110 486 117 482 1.69e-27 115
MS.gene52369.t1 MTR_2g020710 25.000 352 230 7 8 352 25 349 1.96e-27 114
MS.gene52369.t1 MTR_2g020710 25.000 352 230 7 8 352 25 349 2.46e-27 114
MS.gene52369.t1 MTR_2g020710 27.881 269 185 4 85 352 89 349 2.62e-27 113
MS.gene52369.t1 MTR_4g064820 29.201 363 223 12 25 371 95 439 1.79e-26 112
MS.gene52369.t1 MTR_4g118610 24.551 334 239 5 85 417 92 413 4.47e-26 110
MS.gene52369.t1 MTR_1g114280 35.526 152 79 2 349 500 21 153 5.96e-25 101
MS.gene52369.t1 MTR_2g026140 25.360 347 221 8 32 369 30 347 1.26e-22 101
MS.gene52369.t1 MTR_7g113960 24.316 329 222 4 26 354 27 328 1.56e-22 99.8
MS.gene52369.t1 MTR_7g113970 22.993 274 203 3 85 358 102 367 6.21e-22 98.6
MS.gene52369.t1 MTR_3g116060 29.121 182 122 4 97 274 56 234 1.59e-17 86.3
MS.gene52369.t1 MTR_5g024740 25.517 290 184 9 24 310 2 262 2.68e-16 82.4
MS.gene52369.t1 MTR_3g118530 28.333 180 126 3 97 274 58 236 2.75e-16 82.4
MS.gene52369.t1 MTR_3g118530 28.333 180 126 3 97 274 58 236 9.71e-16 80.5
MS.gene52369.t1 MTR_5g044910 26.809 235 152 6 24 256 2 218 4.30e-15 78.6
MS.gene52369.t1 MTR_8g073100 26.809 235 150 6 25 256 3 218 6.11e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52369.t1 AT1G34580 60.913 504 192 3 1 501 1 502 0.0 634
MS.gene52369.t1 AT1G34580 60.619 452 175 2 53 501 1 452 0.0 576
MS.gene52369.t1 AT5G26340 50.000 512 245 8 1 507 1 506 0.0 532
MS.gene52369.t1 AT1G11260 53.360 491 221 6 20 506 17 503 0.0 526
MS.gene52369.t1 AT4G02050 48.924 511 255 5 1 509 1 507 0.0 521
MS.gene52369.t1 AT4G02050 48.924 511 255 5 1 509 1 507 0.0 521
MS.gene52369.t1 AT3G19940 50.296 507 246 6 1 505 1 503 1.30e-180 517
MS.gene52369.t1 AT3G19930 51.485 505 238 5 1 503 1 500 1.31e-179 514
MS.gene52369.t1 AT3G19930 51.485 505 238 5 1 503 1 500 1.31e-179 514
MS.gene52369.t1 AT1G50310 50.000 516 248 7 1 509 1 513 6.96e-178 510
MS.gene52369.t1 AT4G21480 51.521 493 235 4 13 503 10 500 1.77e-176 506
MS.gene52369.t1 AT5G23270 50.992 504 237 7 1 499 1 499 3.01e-174 501
MS.gene52369.t1 AT5G61520 46.680 497 254 5 19 508 17 509 1.48e-164 476
MS.gene52369.t1 AT1G77210 45.562 507 269 7 1 504 1 503 5.93e-160 464
MS.gene52369.t1 AT1G77210 45.562 507 269 7 1 504 1 503 5.93e-160 464
MS.gene52369.t1 AT3G05960 46.029 491 259 5 20 508 15 501 1.58e-155 453
MS.gene52369.t1 AT5G26250 45.306 490 262 5 20 507 16 501 3.61e-155 452
MS.gene52369.t1 AT5G61520 45.690 464 241 5 52 508 2 461 5.33e-148 432
MS.gene52369.t1 AT1G07340 44.856 486 257 7 21 501 18 497 7.11e-138 407
MS.gene52369.t1 AT1G50310 49.171 362 176 5 154 509 11 370 3.09e-124 368
MS.gene52369.t1 AT1G77210 42.493 353 197 6 154 504 6 354 3.52e-105 318
MS.gene52369.t1 AT2G16120 30.372 484 296 9 30 493 30 492 3.04e-60 207
MS.gene52369.t1 AT2G16130 29.652 489 293 10 30 493 30 492 7.76e-59 203
MS.gene52369.t1 AT3G18830 28.279 488 303 10 30 494 40 503 2.69e-54 191
MS.gene52369.t1 AT2G18480 29.895 475 282 11 40 490 36 483 6.51e-54 189
MS.gene52369.t1 AT4G36670 27.800 500 308 11 30 505 21 491 4.35e-49 176
MS.gene52369.t1 AT1G08900 29.136 405 273 5 85 488 23 414 2.28e-45 164
MS.gene52369.t1 AT1G08900 29.136 405 273 5 85 488 57 448 5.77e-45 164
MS.gene52369.t1 AT1G08900 29.136 405 273 5 85 488 65 456 7.20e-45 164
MS.gene52369.t1 AT1G08900 29.136 405 273 5 85 488 65 456 7.20e-45 164
MS.gene52369.t1 AT1G75220 25.696 467 321 4 23 489 45 485 1.20e-44 164
MS.gene52369.t1 AT2G48020 27.941 408 276 7 85 489 68 460 6.81e-44 161
MS.gene52369.t1 AT2G48020 27.941 408 276 7 85 489 68 460 6.81e-44 161
MS.gene52369.t1 AT5G16150 26.681 461 299 8 32 486 111 538 1.61e-42 159
MS.gene52369.t1 AT5G16150 26.681 461 299 8 32 486 111 538 1.61e-42 159
MS.gene52369.t1 AT5G16150 26.681 461 299 8 32 486 111 538 1.61e-42 159
MS.gene52369.t1 AT2G20780 26.625 477 306 12 23 486 51 496 3.85e-42 158
MS.gene52369.t1 AT1G19450 25.427 468 323 4 23 490 46 487 2.78e-41 155
MS.gene52369.t1 AT5G17010 28.392 479 296 11 27 486 48 498 4.83e-41 154
MS.gene52369.t1 AT5G17010 28.392 479 296 11 27 486 48 498 4.83e-41 154
MS.gene52369.t1 AT5G17010 28.392 479 296 11 27 486 48 498 4.83e-41 154
MS.gene52369.t1 AT2G20780 27.139 409 274 8 90 486 42 438 1.55e-40 152
MS.gene52369.t1 AT5G59250 28.484 488 295 14 25 488 97 554 3.02e-40 153
MS.gene52369.t1 AT1G08890 25.793 473 318 8 21 492 22 462 9.41e-40 150
MS.gene52369.t1 AT5G27350 26.496 468 309 7 21 486 26 460 1.34e-39 150
MS.gene52369.t1 AT1G08900 30.058 346 228 5 85 429 65 397 2.71e-39 148
MS.gene52369.t1 AT3G05165 26.068 468 311 7 21 486 25 459 7.63e-39 147
MS.gene52369.t1 AT3G05165 26.068 468 311 7 21 486 25 459 7.63e-39 147
MS.gene52369.t1 AT3G05165 26.068 468 311 7 21 486 25 459 7.63e-39 147
MS.gene52369.t1 AT3G05155 26.420 405 278 8 85 486 67 454 9.24e-39 147
MS.gene52369.t1 AT1G30220 31.054 351 212 7 33 377 35 361 9.91e-39 149
MS.gene52369.t1 AT3G05160 25.751 466 315 6 21 486 16 450 1.17e-38 147
MS.gene52369.t1 AT3G05160 27.250 400 279 4 87 486 14 401 1.21e-38 146
MS.gene52369.t1 AT3G05160 27.250 400 279 4 87 486 14 401 1.21e-38 146
MS.gene52369.t1 AT1G08930 24.733 469 322 5 21 489 53 490 2.25e-38 147
MS.gene52369.t1 AT1G08930 24.733 469 322 5 21 489 53 490 2.25e-38 147
MS.gene52369.t1 AT3G05400 27.363 402 280 5 85 486 66 455 4.15e-38 145
MS.gene52369.t1 AT1G54730 26.247 461 304 9 32 489 38 465 5.84e-38 145
MS.gene52369.t1 AT3G03090 28.025 471 294 12 34 486 55 498 1.92e-36 141
MS.gene52369.t1 AT2G43330 24.790 476 322 10 30 495 35 484 2.78e-36 141
MS.gene52369.t1 AT5G18840 24.634 410 282 6 85 486 84 474 8.01e-36 139
MS.gene52369.t1 AT3G05400 28.997 369 249 6 119 486 79 435 9.80e-36 138
MS.gene52369.t1 AT4G04760 27.007 411 281 6 85 490 12 408 2.35e-35 137
MS.gene52369.t1 AT3G05165 26.277 411 268 7 21 429 25 402 3.44e-35 138
MS.gene52369.t1 AT4G04750 26.406 409 281 5 85 488 76 469 4.12e-35 137
MS.gene52369.t1 AT4G04750 26.406 409 281 5 85 488 76 469 4.12e-35 137
MS.gene52369.t1 AT4G04760 27.007 411 281 6 85 490 71 467 4.18e-35 137
MS.gene52369.t1 AT4G04750 26.406 409 281 5 85 488 120 513 8.44e-35 137
MS.gene52369.t1 AT3G05165 26.277 411 268 7 21 429 25 402 9.76e-35 136
MS.gene52369.t1 AT3G05165 26.277 411 268 7 21 429 25 402 9.76e-35 136
MS.gene52369.t1 AT5G27360 24.145 468 320 6 21 486 30 464 1.12e-34 136
MS.gene52369.t1 AT5G27360 24.145 468 320 6 21 486 78 512 1.87e-34 136
MS.gene52369.t1 AT1G54730 25.708 459 288 9 32 489 38 444 4.87e-34 134
MS.gene52369.t1 AT1G54730 26.202 416 272 8 32 445 38 420 4.99e-34 134
MS.gene52369.t1 AT4G16480 27.824 363 228 7 23 372 24 365 6.23e-33 132
MS.gene52369.t1 AT4G16480 27.824 363 228 7 23 372 24 365 6.23e-33 132
MS.gene52369.t1 AT4G16480 27.824 363 228 7 23 372 24 365 6.23e-33 132
MS.gene52369.t1 AT3G05150 24.686 478 324 10 12 486 21 465 1.57e-32 130
MS.gene52369.t1 AT3G05150 24.686 478 324 10 12 486 21 465 1.57e-32 130
MS.gene52369.t1 AT3G05150 24.686 478 324 10 12 486 21 465 1.59e-32 130
MS.gene52369.t1 AT4G04760 25.672 409 286 6 85 490 71 464 9.08e-32 128
MS.gene52369.t1 AT5G27360 25.634 355 252 5 132 486 18 360 3.36e-31 124
MS.gene52369.t1 AT5G27360 25.634 355 252 5 132 486 18 360 3.36e-31 124
MS.gene52369.t1 AT1G54730 25.604 414 256 8 32 445 38 399 3.23e-30 122
MS.gene52369.t1 AT1G79820 27.000 400 267 10 92 486 107 486 7.02e-30 122
MS.gene52369.t1 AT1G79820 27.000 400 267 10 92 486 107 486 7.02e-30 122
MS.gene52369.t1 AT1G67300 26.286 350 231 7 99 439 107 438 1.87e-28 118
MS.gene52369.t1 AT1G54730 25.980 408 265 9 32 437 38 410 2.39e-28 117
MS.gene52369.t1 AT1G54730 25.980 408 265 9 32 437 38 410 2.39e-28 117
MS.gene52369.t1 AT2G48020 27.562 283 196 4 85 366 68 342 2.69e-28 116
MS.gene52369.t1 AT1G67300 26.857 350 228 7 99 439 107 437 3.94e-28 117
MS.gene52369.t1 AT1G67300 26.857 350 228 7 99 439 107 437 3.94e-28 117
MS.gene52369.t1 AT2G35740 25.549 364 235 9 26 375 26 367 5.75e-28 118
MS.gene52369.t1 AT1G67300 26.361 349 229 7 99 438 107 436 1.94e-27 115
MS.gene52369.t1 AT1G67300 26.361 349 229 7 99 438 107 436 1.94e-27 115
MS.gene52369.t1 AT2G48020 27.407 270 188 3 85 354 68 329 2.10e-27 113
MS.gene52369.t1 AT3G20460 25.871 402 286 5 85 486 93 482 2.39e-27 115
MS.gene52369.t1 AT3G05155 26.667 270 187 3 85 354 67 325 4.16e-27 112
MS.gene52369.t1 AT1G67300 26.901 342 222 7 99 431 107 429 1.96e-26 112
MS.gene52369.t1 AT1G67300 26.901 342 222 7 99 431 107 429 1.96e-26 112
MS.gene52369.t1 AT1G79820 26.513 347 235 8 92 436 107 435 2.55e-26 112
MS.gene52369.t1 AT1G54730 26.625 323 210 6 32 354 38 333 6.00e-26 108
MS.gene52369.t1 AT1G05030 25.108 462 306 13 32 486 85 513 7.59e-26 111
MS.gene52369.t1 AT1G08920 24.265 408 285 6 85 486 72 461 7.71e-26 110
MS.gene52369.t1 AT1G54730 26.846 298 194 5 32 329 38 311 2.08e-25 107
MS.gene52369.t1 AT1G54730 26.846 298 194 5 32 329 38 311 2.08e-25 107
MS.gene52369.t1 AT1G05030 25.185 405 279 10 90 486 73 461 4.06e-25 108
MS.gene52369.t1 AT1G08920 22.469 405 303 4 85 486 72 468 8.19e-25 107
MS.gene52369.t1 AT1G54730 26.846 298 194 5 32 329 38 311 9.49e-25 106
MS.gene52369.t1 AT5G27360 22.469 405 279 6 21 423 30 401 5.43e-24 104
MS.gene52369.t1 AT1G08920 24.501 351 241 6 85 429 72 404 9.80e-23 101
MS.gene52369.t1 AT5G17010 26.004 473 241 16 34 486 52 435 2.92e-22 99.8
MS.gene52369.t1 AT3G51490 25.794 252 167 6 25 274 3 236 3.20e-19 91.7
MS.gene52369.t1 AT3G51490 25.794 252 167 6 25 274 3 236 3.28e-19 91.7
MS.gene52369.t1 AT1G79820 24.250 400 230 10 92 486 107 438 1.37e-18 88.6
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 1.97e-18 89.4
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 1.97e-18 89.4
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 1.97e-18 89.4
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 1.97e-18 89.4
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 1.97e-18 89.4
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 1.97e-18 89.4
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 1.97e-18 89.4
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 2.13e-18 89.0
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 2.13e-18 89.0
MS.gene52369.t1 AT4G35300 31.551 187 124 4 90 274 52 236 2.13e-18 89.0
MS.gene52369.t1 AT3G51490 27.807 187 131 4 90 274 2 186 2.59e-18 89.0
MS.gene52369.t1 AT1G20840 27.962 211 142 4 78 279 30 239 4.61e-18 88.2
MS.gene52369.t1 AT1G20840 27.962 211 142 4 78 279 30 239 4.61e-18 88.2
MS.gene52369.t1 AT1G79820 23.626 364 209 9 128 486 77 376 6.03e-15 77.0

Find 114 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATATTCCCATGCTCATTT+TGG 0.112731 3.1:+60934674 MS.gene52369:CDS
GGATATGACATTGGAATTTC+AGG 0.174947 3.1:+60934278 MS.gene52369:CDS
CTAAAAGCGCCTCGCCATTT+TGG 0.179081 3.1:-60935039 None:intergenic
CCTGTGGTTCTTATATTTAC+AGG 0.188974 3.1:-60935911 None:intergenic
CCTTTAAGACCATATTAAAA+AGG 0.238402 3.1:+60935361 MS.gene52369:CDS
TGTTTATACTCTGCTGGTTT+TGG 0.264387 3.1:+60935842 MS.gene52369:CDS
GCCGCCTTCCTTAAAATATC+TGG 0.285888 3.1:-60934459 None:intergenic
CTCTTCCATTCTGTGGGCTT+GGG 0.308466 3.1:+60935474 MS.gene52369:CDS
TCTCTTCCATTCTGTGGGCT+TGG 0.312953 3.1:+60935473 MS.gene52369:CDS
CCAGATGCTGCCATCAATAT+TGG 0.323176 3.1:+60934191 MS.gene52369:CDS
ATTGTAGGTGGTGCTATTAA+TGG 0.325353 3.1:+60934642 MS.gene52369:CDS
CGAAGAATCTTGTTCATAAC+CGG 0.330741 3.1:+60935588 MS.gene52369:CDS
CGAAGAAACGTCATCATAAT+AGG 0.339968 3.1:+60934606 MS.gene52369:CDS
ATGTTATGTCACTTTAAGTT+TGG 0.344402 3.1:+60935998 MS.gene52369:CDS
TATGGGGAAAACATTGGTTT+TGG 0.349042 3.1:+60936122 MS.gene52369:CDS
ACATGCATCGTTGCTGCTTC+CGG 0.358767 3.1:+60934242 MS.gene52369:CDS
CTATTATGTTTATACTCTGC+TGG 0.362807 3.1:+60935836 MS.gene52369:CDS
CATTATGATGTTTGTCTGCT+TGG 0.369746 3.1:+60935614 MS.gene52369:CDS
GGTGGTGCCCTCTTTATTGT+AGG 0.388549 3.1:+60934627 MS.gene52369:CDS
TATCTTGCCACCAATATTGA+TGG 0.389773 3.1:-60934201 None:intergenic
TTAATTTCTGCCATTGTACT+TGG 0.400667 3.1:+60935510 MS.gene52369:CDS
GCAGTGGTGTCTGGTGTTGA+TGG 0.402312 3.1:+60935770 MS.gene52369:CDS
CTTCTTGTTCTATGCTGGTT+GGG 0.406015 3.1:+60936024 MS.gene52369:CDS
CCTTCTTGTTCTATGCTGGT+TGG 0.407272 3.1:+60936023 MS.gene52369:CDS
GGAGCCTTCTTGTTCTATGC+TGG 0.408479 3.1:+60936019 MS.gene52369:CDS
AAAGCCTTACGCAAAATTAG+AGG 0.410530 3.1:+60935261 MS.gene52369:CDS
CCACGTTCGACTAAGCTGTT+GGG 0.414673 3.1:-60935219 None:intergenic
TGGATTCAATGTACACCATA+TGG 0.418769 3.1:+60936104 MS.gene52369:CDS
ACGTCTTCTCTTTATCTAGC+TGG 0.428341 3.1:+60934537 MS.gene52369:CDS
CCCACAGAATGGAAGAGATT+AGG 0.430797 3.1:-60935468 None:intergenic
CCAATATTGATGGCAGCATC+TGG 0.432816 3.1:-60934191 None:intergenic
CCTAATCTCTTCCATTCTGT+GGG 0.435539 3.1:+60935468 MS.gene52369:CDS
TCCTAATCTCTTCCATTCTG+TGG 0.440720 3.1:+60935467 MS.gene52369:CDS
ACCAAATCGGTCAACAAAAC+CGG 0.441925 3.1:-60935565 None:intergenic
ACCACGTTCGACTAAGCTGT+TGG 0.458442 3.1:-60935220 None:intergenic
AAGGGAATTCCTTTAGTCTC+AGG 0.463134 3.1:-60936082 None:intergenic
TGTTGATACCGGTAAGTTGT+TGG 0.464630 3.1:-60935428 None:intergenic
GGAGTTGGTGTAGTCGCTGC+AGG 0.467474 3.1:+60935084 MS.gene52369:CDS
GTGTCTAACCTTATCTCTGC+CGG 0.472009 3.1:+60935546 MS.gene52369:CDS
GGATTCAATGTACACCATAT+GGG 0.477310 3.1:+60936105 MS.gene52369:CDS
GGTCGTGGGGCCCTCTAACA+TGG 0.478479 3.1:+60935867 MS.gene52369:CDS
CTGTGGTTCTTATATTTACA+GGG 0.480105 3.1:-60935910 None:intergenic
TACTAATATTGCATTCCCCT+TGG 0.480612 3.1:-60935807 None:intergenic
ATTGTGCTAGCAGTGGTGTC+TGG 0.481749 3.1:+60935761 MS.gene52369:CDS
CAACAAAACCGGCAGAGATA+AGG 0.483806 3.1:-60935554 None:intergenic
CCGGTAAGTTGTTGGAAAAG+TGG 0.489077 3.1:-60935420 None:intergenic
CCTGCAGTTGTAATGACAAT+TGG 0.493710 3.1:+60935174 MS.gene52369:CDS
CGGTAAGTTGTTGGAAAAGT+GGG 0.494424 3.1:-60935419 None:intergenic
CTTGGAATAAGCCATGTTAG+AGG 0.494856 3.1:-60935878 None:intergenic
TGGGGATGGAGACTCTCTCT+TGG 0.498033 3.1:+60935138 MS.gene52369:CDS
ACAAGATTCTTCGACCAAAT+CGG 0.499677 3.1:-60935578 None:intergenic
CGATTTGTTAAAGGAGAAGA+TGG 0.500703 3.1:+60936148 MS.gene52369:CDS
TCTCCATCCCCATGTGTGCT+TGG 0.503665 3.1:-60935127 None:intergenic
AATAGCTATGCTTTGTCCTG+TGG 0.505069 3.1:-60935927 None:intergenic
AGCAAAGTCACCGCGTGGTA+TGG 0.506861 3.1:+60934582 MS.gene52369:CDS
TTAATAAGTTCTTCTAACTC+AGG 0.509188 3.1:-60935303 None:intergenic
TGGTGCTATTAATGGTGGTT+CGG 0.511870 3.1:+60934650 MS.gene52369:CDS
CCATCCCCATGTGTGCTTGG+CGG 0.515790 3.1:-60935124 None:intergenic
GAAAGCGACGATGTTGATAC+CGG 0.516201 3.1:-60935439 None:intergenic
TGAGACTAAAGGAATTCCCT+TGG 0.516494 3.1:+60936084 MS.gene52369:CDS
GGGGAATGCAATATTAGTAT+TGG 0.522711 3.1:+60935811 MS.gene52369:CDS
ACGGCACCGCCAAGCACACA+TGG 0.525868 3.1:+60935118 MS.gene52369:CDS
AATTGGTTCCTTCCTCATAA+CGG 0.526052 3.1:+60935191 MS.gene52369:CDS
TATGGTGTACATTGAATCCA+AGG 0.528540 3.1:-60936101 None:intergenic
CGGTGACTTTGCTAGCTGCA+AGG 0.530108 3.1:-60934572 None:intergenic
CCAATTGTCATTACAACTGC+AGG 0.530129 3.1:-60935174 None:intergenic
CACGTTCGACTAAGCTGTTG+GGG 0.538498 3.1:-60935218 None:intergenic
CCGCCAAGCACACATGGGGA+TGG 0.549134 3.1:+60935124 MS.gene52369:CDS
TAGCACCACCTACAATAAAG+AGG 0.553079 3.1:-60934635 None:intergenic
AAGGGAGTATCGACCTCACT+TGG 0.556645 3.1:+60935380 MS.gene52369:CDS
GGTGACTTTGCTAGCTGCAA+GGG 0.565981 3.1:-60934571 None:intergenic
TTTACAGGGAAAATCTCACT+TGG 0.566699 3.1:-60935896 None:intergenic
CATGTCCCAAGCCCACAGAA+TGG 0.569588 3.1:-60935479 None:intergenic
AACACGACCCAAAATGAGCA+TGG 0.570691 3.1:-60934682 None:intergenic
ACACCATATGGGGAAAACAT+TGG 0.572553 3.1:+60936116 MS.gene52369:CDS
CCTGTAAATATAAGAACCAC+AGG 0.573263 3.1:+60935911 MS.gene52369:CDS
GGCTGGTGGGGTATTTGCTG+TGG 0.574846 3.1:+60934160 MS.gene52369:CDS
TCTGTGGGCTTGGGACATGA+CGG 0.580489 3.1:+60935483 MS.gene52369:CDS
GATGCTGCCATCAATATTGG+TGG 0.590546 3.1:+60934194 MS.gene52369:CDS
AGCACCACCTACAATAAAGA+GGG 0.594655 3.1:-60934634 None:intergenic
GGTGCCCTCTTTATTGTAGG+TGG 0.596173 3.1:+60934630 MS.gene52369:CDS
TTGGAATAAGCCATGTTAGA+GGG 0.596308 3.1:-60935877 None:intergenic
GAAGAATCTTGTTCATAACC+GGG 0.599176 3.1:+60935589 MS.gene52369:CDS
GACAAACATCATAATGCCCC+CGG 0.601203 3.1:-60935607 None:intergenic
GTATCGACCTCACTTGGTGA+TGG 0.602567 3.1:+60935386 MS.gene52369:CDS
TAACTCAGGTTCAATATCAA+CGG 0.603300 3.1:-60935289 None:intergenic
TGCATCGTTGCTGCTTCCGG+TGG 0.604561 3.1:+60934245 MS.gene52369:CDS
TGGTACAAATGACATATCCA+AGG 0.605738 3.1:+60935790 MS.gene52369:CDS
CGGCACCGCCAAGCACACAT+GGG 0.606397 3.1:+60935119 MS.gene52369:CDS
GATTCAATGTACACCATATG+GGG 0.610171 3.1:+60936106 MS.gene52369:CDS
GCAAATGCCATCACCAAGTG+AGG 0.611968 3.1:-60935393 None:intergenic
CAGAGATAAGGTTAGACACA+AGG 0.612076 3.1:-60935542 None:intergenic
GAAATTTCAGATAGATACAA+TGG 0.614599 3.1:-60935012 None:intergenic
GTAGGTGGTGCTATTAATGG+TGG 0.614602 3.1:+60934645 MS.gene52369:CDS
AAGGTTAGACACAAGGCTAA+CGG 0.616354 3.1:-60935535 None:intergenic
ACACGACCCAAAATGAGCAT+GGG 0.620677 3.1:-60934681 None:intergenic
GGTACAAATGACATATCCAA+GGG 0.626581 3.1:+60935791 MS.gene52369:CDS
CCAACCAGCATAGAACAAGA+AGG 0.632155 3.1:-60936023 None:intergenic
AAGAATCTTGTTCATAACCG+GGG 0.636667 3.1:+60935590 MS.gene52369:CDS
GGCACCGCCAAGCACACATG+GGG 0.639282 3.1:+60935120 MS.gene52369:CDS
CCCAACAGCTTAGTCGAACG+TGG 0.654800 3.1:+60935219 MS.gene52369:CDS
TTCAGGAGGTGTCACAACGA+TGG 0.658741 3.1:+60934413 MS.gene52369:intron
AGAATCTTGTTCATAACCGG+GGG 0.669322 3.1:+60935591 MS.gene52369:CDS
CTCAGGTTCAATATCAACGG+AGG 0.672066 3.1:-60935286 None:intergenic
AGAAACGTCATCATAATAGG+TGG 0.673000 3.1:+60934609 MS.gene52369:CDS
GCTGCAGGCTGCATAAACTA+CGG 0.674975 3.1:+60935099 MS.gene52369:CDS
TGTGTCCATTGTGCTAGCAG+TGG 0.678099 3.1:+60935754 MS.gene52369:CDS
AGACACCACTGCTAGCACAA+TGG 0.679999 3.1:-60935759 None:intergenic
ATGGTGTACATTGAATCCAA+GGG 0.688425 3.1:-60936100 None:intergenic
GCTAACGGATCCAAGTACAA+TGG 0.704332 3.1:-60935520 None:intergenic
CAGCTAGCAAAGTCACCGCG+TGG 0.728015 3.1:+60934577 MS.gene52369:CDS
ACGTTCGACTAAGCTGTTGG+GGG 0.743564 3.1:-60935217 None:intergenic
GTACAAATGACATATCCAAG+GGG 0.751900 3.1:+60935792 MS.gene52369:CDS
GTTTCTTCGACCATACCACG+CGG 0.876756 3.1:-60934592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAATTCAAATATAATA+AGG - chr3.1:60934332-60934351 None:intergenic 10.0%
!! AATTTAATAAATAGATAGTT+AGG - chr3.1:60935655-60935674 None:intergenic 10.0%
!!! AACAATAATTTTATGTAAAA+AGG + chr3.1:60934847-60934866 MS.gene52369:intron 10.0%
!!! AGTCTTTTAAAAAAAAAAAT+AGG - chr3.1:60934943-60934962 None:intergenic 10.0%
!!! TTAATTATTATTTTACCAAC+AGG + chr3.1:60934984-60935003 MS.gene52369:intron 15.0%
!! AATGCAGTTGAAAATTTAAA+AGG - chr3.1:60934966-60934985 None:intergenic 20.0%
!! ACACAAACAATTTAATTAGT+AGG - chr3.1:60935716-60935735 None:intergenic 20.0%
!! TACAACATTAATGATTGTTT+AGG - chr3.1:60934798-60934817 None:intergenic 20.0%
!!! AATTCTTTCCAGATATTTTA+AGG + chr3.1:60934451-60934470 MS.gene52369:CDS 20.0%
!!! CTTTAAGACCATATTAAAAA+GGG + chr3.1:60935362-60935381 MS.gene52369:CDS 20.0%
!!! CTTTTTAATATGGTCTTAAA+GGG - chr3.1:60935363-60935382 None:intergenic 20.0%
! ATATCAAGACAATTATAGTG+AGG - chr3.1:60934915-60934934 None:intergenic 25.0%
! GAAATTTCAGATAGATACAA+TGG - chr3.1:60935015-60935034 None:intergenic 25.0%
! TTAATAAGTTCTTCTAACTC+AGG - chr3.1:60935306-60935325 None:intergenic 25.0%
!! TTTTATGTAAAAAGGAGTAG+AGG + chr3.1:60934855-60934874 MS.gene52369:intron 25.0%
!!! ATGTTATGTCACTTTAAGTT+TGG + chr3.1:60935998-60936017 MS.gene52369:CDS 25.0%
!!! CCTTTAAGACCATATTAAAA+AGG + chr3.1:60935361-60935380 MS.gene52369:CDS 25.0%
!!! CCTTTTTAATATGGTCTTAA+AGG - chr3.1:60935364-60935383 None:intergenic 25.0%
!!! GGAAAGAATTTTTGAAGAAA+GGG - chr3.1:60934441-60934460 None:intergenic 25.0%
!!! TGGAAAGAATTTTTGAAGAA+AGG - chr3.1:60934442-60934461 None:intergenic 25.0%
CTATTATGTTTATACTCTGC+TGG + chr3.1:60935836-60935855 MS.gene52369:CDS 30.0%
CTGTGGTTCTTATATTTACA+GGG - chr3.1:60935913-60935932 None:intergenic 30.0%
TAACTCAGGTTCAATATCAA+CGG - chr3.1:60935292-60935311 None:intergenic 30.0%
TTAATTTCTGCCATTGTACT+TGG + chr3.1:60935510-60935529 MS.gene52369:CDS 30.0%
TTGTGAAAATGTCGAATTTC+AGG + chr3.1:60934396-60934415 MS.gene52369:intron 30.0%
! AAATATTCCCATGCTCATTT+TGG + chr3.1:60934674-60934693 MS.gene52369:CDS 30.0%
! AATATTCCCATGCTCATTTT+GGG + chr3.1:60934675-60934694 MS.gene52369:CDS 30.0%
! AATTTTGCGTAAGGCTTTTT+TGG - chr3.1:60935259-60935278 None:intergenic 30.0%
! CTTCTTTTTGGATATGACAT+TGG + chr3.1:60934269-60934288 MS.gene52369:CDS 30.0%
! TCGATACTCCCTTTTTAATA+TGG - chr3.1:60935373-60935392 None:intergenic 30.0%
!! CTTTCCAGATATTTTAAGGA+AGG + chr3.1:60934455-60934474 MS.gene52369:CDS 30.0%
!! TTTCAATTCTTTTTGGGAGT+TGG + chr3.1:60935069-60935088 MS.gene52369:CDS 30.0%
!!! AGTCGCAAAACACTTTTTTT+TGG + chr3.1:60934741-60934760 MS.gene52369:intron 30.0%
!!! GTCGCAAAACACTTTTTTTT+GGG + chr3.1:60934742-60934761 MS.gene52369:intron 30.0%
!!! TTTTGGTGTCGATTTGTTAA+AGG + chr3.1:60936139-60936158 MS.gene52369:CDS 30.0%
AAAGCCTTACGCAAAATTAG+AGG + chr3.1:60935261-60935280 MS.gene52369:CDS 35.0%
AAGAATCTTGTTCATAACCG+GGG + chr3.1:60935590-60935609 MS.gene52369:CDS 35.0%
ACAAGATTCTTCGACCAAAT+CGG - chr3.1:60935581-60935600 None:intergenic 35.0%
AGAAACGTCATCATAATAGG+TGG + chr3.1:60934609-60934628 MS.gene52369:CDS 35.0%
AGACAATTATAGTGAGGTAC+AGG - chr3.1:60934909-60934928 None:intergenic 35.0%
ATATCCAAAAAGAAGACCAC+CGG - chr3.1:60934264-60934283 None:intergenic 35.0%
ATGGTGTACATTGAATCCAA+GGG - chr3.1:60936103-60936122 None:intergenic 35.0%
CATTATGATGTTTGTCTGCT+TGG + chr3.1:60935614-60935633 MS.gene52369:CDS 35.0%
CCTGTAAATATAAGAACCAC+AGG + chr3.1:60935911-60935930 MS.gene52369:CDS 35.0%
CCTGTGGTTCTTATATTTAC+AGG - chr3.1:60935914-60935933 None:intergenic 35.0%
CGAAGAAACGTCATCATAAT+AGG + chr3.1:60934606-60934625 MS.gene52369:CDS 35.0%
CGAAGAATCTTGTTCATAAC+CGG + chr3.1:60935588-60935607 MS.gene52369:CDS 35.0%
GAAGAATCTTGTTCATAACC+GGG + chr3.1:60935589-60935608 MS.gene52369:CDS 35.0%
GATTCAATGTACACCATATG+GGG + chr3.1:60936106-60936125 MS.gene52369:CDS 35.0%
GGATATGACATTGGAATTTC+AGG + chr3.1:60934278-60934297 MS.gene52369:CDS 35.0%
GGATTCAATGTACACCATAT+GGG + chr3.1:60936105-60936124 MS.gene52369:CDS 35.0%
GGGGAATGCAATATTAGTAT+TGG + chr3.1:60935811-60935830 MS.gene52369:CDS 35.0%
GGTACAAATGACATATCCAA+GGG + chr3.1:60935791-60935810 MS.gene52369:CDS 35.0%
GTACAAATGACATATCCAAG+GGG + chr3.1:60935792-60935811 MS.gene52369:CDS 35.0%
GTACAGGTAAAACGAACATA+AGG - chr3.1:60934893-60934912 None:intergenic 35.0%
TACTAATATTGCATTCCCCT+TGG - chr3.1:60935810-60935829 None:intergenic 35.0%
TATCTTGCCACCAATATTGA+TGG - chr3.1:60934204-60934223 None:intergenic 35.0%
TATGGTGTACATTGAATCCA+AGG - chr3.1:60936104-60936123 None:intergenic 35.0%
TCCCAAAAAGAATTGAAAGC+CGG - chr3.1:60935067-60935086 None:intergenic 35.0%
TGAAAATGTCGAATTTCAGG+AGG + chr3.1:60934399-60934418 MS.gene52369:intron 35.0%
TGGATTCAATGTACACCATA+TGG + chr3.1:60936104-60936123 MS.gene52369:CDS 35.0%
TGGTACAAATGACATATCCA+AGG + chr3.1:60935790-60935809 MS.gene52369:CDS 35.0%
TTGGAATAAGCCATGTTAGA+GGG - chr3.1:60935880-60935899 None:intergenic 35.0%
TTTACAGGGAAAATCTCACT+TGG - chr3.1:60935899-60935918 None:intergenic 35.0%
! AAACCAATGTTTTCCCCATA+TGG - chr3.1:60936122-60936141 None:intergenic 35.0%
! AATTGGTTCCTTCCTCATAA+CGG + chr3.1:60935191-60935210 MS.gene52369:CDS 35.0%
! TTTTTCTTGCCTGAGACTAA+AGG + chr3.1:60936073-60936092 MS.gene52369:CDS 35.0%
!! ACCGGCTTTCAATTCTTTTT+GGG + chr3.1:60935063-60935082 MS.gene52369:CDS 35.0%
!! ATTGTAGGTGGTGCTATTAA+TGG + chr3.1:60934642-60934661 MS.gene52369:CDS 35.0%
!! ATTTTGGGTCGTGTTTTTCT+CGG + chr3.1:60934690-60934709 MS.gene52369:CDS 35.0%
!! CGATTTGTTAAAGGAGAAGA+TGG + chr3.1:60936148-60936167 MS.gene52369:CDS 35.0%
!! TCCAGATATTTTAAGGAAGG+CGG + chr3.1:60934458-60934477 MS.gene52369:CDS 35.0%
!!! TACCGGCTTTCAATTCTTTT+TGG + chr3.1:60935062-60935081 MS.gene52369:CDS 35.0%
!!! TATGGGGAAAACATTGGTTT+TGG + chr3.1:60936122-60936141 MS.gene52369:CDS 35.0%
!!! TGTTTATACTCTGCTGGTTT+TGG + chr3.1:60935842-60935861 MS.gene52369:CDS 35.0%
AAGGGAATTCCTTTAGTCTC+AGG - chr3.1:60936085-60936104 None:intergenic 40.0%
AAGGTTAGACACAAGGCTAA+CGG - chr3.1:60935538-60935557 None:intergenic 40.0%
AATAGCTATGCTTTGTCCTG+TGG - chr3.1:60935930-60935949 None:intergenic 40.0%
ACACCATATGGGGAAAACAT+TGG + chr3.1:60936116-60936135 MS.gene52369:CDS 40.0%
ACCAAATCGGTCAACAAAAC+CGG - chr3.1:60935568-60935587 None:intergenic 40.0%
ACGTCTTCTCTTTATCTAGC+TGG + chr3.1:60934537-60934556 MS.gene52369:CDS 40.0%
AGAATCTTGTTCATAACCGG+GGG + chr3.1:60935591-60935610 MS.gene52369:CDS 40.0%
AGCACCACCTACAATAAAGA+GGG - chr3.1:60934637-60934656 None:intergenic 40.0%
CAGAGATAAGGTTAGACACA+AGG - chr3.1:60935545-60935564 None:intergenic 40.0%
CCAATTGTCATTACAACTGC+AGG - chr3.1:60935177-60935196 None:intergenic 40.0%
CCTAATCTCTTCCATTCTGT+GGG + chr3.1:60935468-60935487 MS.gene52369:CDS 40.0%
CCTGCAGTTGTAATGACAAT+TGG + chr3.1:60935174-60935193 MS.gene52369:CDS 40.0%
CGGTAAGTTGTTGGAAAAGT+GGG - chr3.1:60935422-60935441 None:intergenic 40.0%
CTGAAATTTCTCCCCCAAAA+TGG + chr3.1:60935025-60935044 MS.gene52369:CDS 40.0%
CTTGGAATAAGCCATGTTAG+AGG - chr3.1:60935881-60935900 None:intergenic 40.0%
TAGCACCACCTACAATAAAG+AGG - chr3.1:60934638-60934657 None:intergenic 40.0%
TCCTAATCTCTTCCATTCTG+TGG + chr3.1:60935467-60935486 MS.gene52369:CDS 40.0%
TGAGACTAAAGGAATTCCCT+TGG + chr3.1:60936084-60936103 MS.gene52369:CDS 40.0%
TGTTGATACCGGTAAGTTGT+TGG - chr3.1:60935431-60935450 None:intergenic 40.0%
! CTTCTTGTTCTATGCTGGTT+GGG + chr3.1:60936024-60936043 MS.gene52369:CDS 40.0%
! GGATCCTCTAATTTTGCGTA+AGG - chr3.1:60935268-60935287 None:intergenic 40.0%
!! CCACTTTTCCAACAACTTAC+CGG + chr3.1:60935420-60935439 MS.gene52369:CDS 40.0%
!! TGGTGCTATTAATGGTGGTT+CGG + chr3.1:60934650-60934669 MS.gene52369:CDS 40.0%
!! TTTTGGGTCGTGTTTTTCTC+GGG + chr3.1:60934691-60934710 MS.gene52369:CDS 40.0%
!!! TATACTCTGCTGGTTTTGGT+TGG + chr3.1:60935846-60935865 MS.gene52369:CDS 40.0%
AACACGACCCAAAATGAGCA+TGG - chr3.1:60934685-60934704 None:intergenic 45.0%
ACACGACCCAAAATGAGCAT+GGG - chr3.1:60934684-60934703 None:intergenic 45.0%
CAACAAAACCGGCAGAGATA+AGG - chr3.1:60935557-60935576 None:intergenic 45.0%
CCAACCAGCATAGAACAAGA+AGG - chr3.1:60936026-60936045 None:intergenic 45.0%
CCAGATGCTGCCATCAATAT+TGG + chr3.1:60934191-60934210 MS.gene52369:CDS 45.0%
CCCACAGAATGGAAGAGATT+AGG - chr3.1:60935471-60935490 None:intergenic 45.0%
CCGGTAAGTTGTTGGAAAAG+TGG - chr3.1:60935423-60935442 None:intergenic 45.0%
CCTTCTTGTTCTATGCTGGT+TGG + chr3.1:60936023-60936042 MS.gene52369:CDS 45.0%
CTCAGGTTCAATATCAACGG+AGG - chr3.1:60935289-60935308 None:intergenic 45.0%
GAAAGCGACGATGTTGATAC+CGG - chr3.1:60935442-60935461 None:intergenic 45.0%
GACAAACATCATAATGCCCC+CGG - chr3.1:60935610-60935629 None:intergenic 45.0%
GATGCTGCCATCAATATTGG+TGG + chr3.1:60934194-60934213 MS.gene52369:CDS 45.0%
GCCGCCTTCCTTAAAATATC+TGG - chr3.1:60934462-60934481 None:intergenic 45.0%
GTGTCTAACCTTATCTCTGC+CGG + chr3.1:60935546-60935565 MS.gene52369:CDS 45.0%
! CCAATATTGATGGCAGCATC+TGG - chr3.1:60934194-60934213 None:intergenic 45.0%
! GCTAACGGATCCAAGTACAA+TGG - chr3.1:60935523-60935542 None:intergenic 45.0%
! GTCGTGTTTTTCTCGGGTTT+GGG + chr3.1:60934697-60934716 MS.gene52369:CDS 45.0%
! TCGTGTTTTTCTCGGGTTTG+GGG + chr3.1:60934698-60934717 MS.gene52369:CDS 45.0%
!! GATATTTTAAGGAAGGCGGC+TGG + chr3.1:60934462-60934481 MS.gene52369:CDS 45.0%
!! GTAGGTGGTGCTATTAATGG+TGG + chr3.1:60934645-60934664 MS.gene52369:CDS 45.0%
!!! TAAAAGCGCCTCGCCATTTT+GGG - chr3.1:60935041-60935060 None:intergenic 45.0%
!!! TAAATAATTAGTTTTTAATT+TGG + chr3.1:60934765-60934784 MS.gene52369:intron 5.0%
ACCACGTTCGACTAAGCTGT+TGG - chr3.1:60935223-60935242 None:intergenic 50.0%
ACGTTCGACTAAGCTGTTGG+GGG - chr3.1:60935220-60935239 None:intergenic 50.0%
AGACACCACTGCTAGCACAA+TGG - chr3.1:60935762-60935781 None:intergenic 50.0%
ATTGTGCTAGCAGTGGTGTC+TGG + chr3.1:60935761-60935780 MS.gene52369:CDS 50.0%
ATTTCTCCCCCAAAATGGCG+AGG + chr3.1:60935030-60935049 MS.gene52369:CDS 50.0%
CACGTTCGACTAAGCTGTTG+GGG - chr3.1:60935221-60935240 None:intergenic 50.0%
CCACGTTCGACTAAGCTGTT+GGG - chr3.1:60935222-60935241 None:intergenic 50.0%
CTCTTCCATTCTGTGGGCTT+GGG + chr3.1:60935474-60935493 MS.gene52369:CDS 50.0%
GATACAATGGTGCAGCCTGT+TGG - chr3.1:60935002-60935021 None:intergenic 50.0%
GCAAATGCCATCACCAAGTG+AGG - chr3.1:60935396-60935415 None:intergenic 50.0%
GCTGCAGGCTGCATAAACTA+CGG + chr3.1:60935099-60935118 MS.gene52369:CDS 50.0%
GGAGCCTTCTTGTTCTATGC+TGG + chr3.1:60936019-60936038 MS.gene52369:CDS 50.0%
GGTGACTTTGCTAGCTGCAA+GGG - chr3.1:60934574-60934593 None:intergenic 50.0%
GGTGCCCTCTTTATTGTAGG+TGG + chr3.1:60934630-60934649 MS.gene52369:CDS 50.0%
GGTGGTGCCCTCTTTATTGT+AGG + chr3.1:60934627-60934646 MS.gene52369:CDS 50.0%
GTTTCTTCGACCATACCACG+CGG - chr3.1:60934595-60934614 None:intergenic 50.0%
TCTCTTCCATTCTGTGGGCT+TGG + chr3.1:60935473-60935492 MS.gene52369:CDS 50.0%
TGTGTCCATTGTGCTAGCAG+TGG + chr3.1:60935754-60935773 MS.gene52369:CDS 50.0%
! ACATGCATCGTTGCTGCTTC+CGG + chr3.1:60934242-60934261 MS.gene52369:CDS 50.0%
! GCTTCCGGTGGTCTTCTTTT+TGG + chr3.1:60934257-60934276 MS.gene52369:CDS 50.0%
! GGTCGTGTTTTTCTCGGGTT+TGG + chr3.1:60934696-60934715 MS.gene52369:CDS 50.0%
! GTATCGACCTCACTTGGTGA+TGG + chr3.1:60935386-60935405 MS.gene52369:CDS 50.0%
!! AAGGGAGTATCGACCTCACT+TGG + chr3.1:60935380-60935399 MS.gene52369:CDS 50.0%
!! GTTTTTCTCGGGTTTGGGGT+CGG + chr3.1:60934702-60934721 MS.gene52369:CDS 50.0%
!! TTCAGGAGGTGTCACAACGA+TGG + chr3.1:60934413-60934432 MS.gene52369:intron 50.0%
!!! AAAAGCGCCTCGCCATTTTG+GGG - chr3.1:60935040-60935059 None:intergenic 50.0%
!!! CTAAAAGCGCCTCGCCATTT+TGG - chr3.1:60935042-60935061 None:intergenic 50.0%
!!! GCCGGTTTTGTTGACCGATT+TGG + chr3.1:60935564-60935583 MS.gene52369:CDS 50.0%
!!! TGCTGGTTTTGGTTGGTCGT+GGG + chr3.1:60935853-60935872 MS.gene52369:CDS 50.0%
AGCAAAGTCACCGCGTGGTA+TGG + chr3.1:60934582-60934601 MS.gene52369:CDS 55.0%
CATGTCCCAAGCCCACAGAA+TGG - chr3.1:60935482-60935501 None:intergenic 55.0%
CCCAACAGCTTAGTCGAACG+TGG + chr3.1:60935219-60935238 MS.gene52369:CDS 55.0%
CGGTGACTTTGCTAGCTGCA+AGG - chr3.1:60934575-60934594 None:intergenic 55.0%
TCTCCATCCCCATGTGTGCT+TGG - chr3.1:60935130-60935149 None:intergenic 55.0%
TCTGTGGGCTTGGGACATGA+CGG + chr3.1:60935483-60935502 MS.gene52369:CDS 55.0%
TGGGGATGGAGACTCTCTCT+TGG + chr3.1:60935138-60935157 MS.gene52369:CDS 55.0%
! GCAGTGGTGTCTGGTGTTGA+TGG + chr3.1:60935770-60935789 MS.gene52369:CDS 55.0%
!! AAAGCGCCTCGCCATTTTGG+GGG - chr3.1:60935039-60935058 None:intergenic 55.0%
!! TGGCGAGGCGCTTTTAGTAC+CGG + chr3.1:60935045-60935064 MS.gene52369:CDS 55.0%
!! TGTTGGGGGTGTCCGTTATG+AGG - chr3.1:60935206-60935225 None:intergenic 55.0%
!!! CTGCTGGTTTTGGTTGGTCG+TGG + chr3.1:60935852-60935871 MS.gene52369:CDS 55.0%
!!! GCTGGTTTTGGTTGGTCGTG+GGG + chr3.1:60935854-60935873 MS.gene52369:CDS 55.0%
CAGCTAGCAAAGTCACCGCG+TGG + chr3.1:60934577-60934596 MS.gene52369:CDS 60.0%
CCATCCCCATGTGTGCTTGG+CGG - chr3.1:60935127-60935146 None:intergenic 60.0%
! GGCTGGTGGGGTATTTGCTG+TGG + chr3.1:60934160-60934179 MS.gene52369:CDS 60.0%
! TGCATCGTTGCTGCTTCCGG+TGG + chr3.1:60934245-60934264 MS.gene52369:CDS 60.0%
!! GGAGTTGGTGTAGTCGCTGC+AGG + chr3.1:60935084-60935103 MS.gene52369:CDS 60.0%
!! GGGGGTGTCCGTTATGAGGA+AGG - chr3.1:60935202-60935221 None:intergenic 60.0%
ACGGCACCGCCAAGCACACA+TGG + chr3.1:60935118-60935137 MS.gene52369:CDS 65.0%
CCGCCAAGCACACATGGGGA+TGG + chr3.1:60935124-60935143 MS.gene52369:CDS 65.0%
CGGCACCGCCAAGCACACAT+GGG + chr3.1:60935119-60935138 MS.gene52369:CDS 65.0%
GGCACCGCCAAGCACACATG+GGG + chr3.1:60935120-60935139 MS.gene52369:CDS 65.0%
GGTCGTGGGGCCCTCTAACA+TGG + chr3.1:60935867-60935886 MS.gene52369:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 60934158 60936189 60934158 ID=MS.gene52369
chr3.1 mRNA 60934158 60936189 60934158 ID=MS.gene52369.t1;Parent=MS.gene52369
chr3.1 exon 60934158 60934299 60934158 ID=MS.gene52369.t1.exon1;Parent=MS.gene52369.t1
chr3.1 CDS 60934158 60934299 60934158 ID=cds.MS.gene52369.t1;Parent=MS.gene52369.t1
chr3.1 exon 60934418 60934737 60934418 ID=MS.gene52369.t1.exon2;Parent=MS.gene52369.t1
chr3.1 CDS 60934418 60934737 60934418 ID=cds.MS.gene52369.t1;Parent=MS.gene52369.t1
chr3.1 exon 60935006 60935635 60935006 ID=MS.gene52369.t1.exon3;Parent=MS.gene52369.t1
chr3.1 CDS 60935006 60935635 60935006 ID=cds.MS.gene52369.t1;Parent=MS.gene52369.t1
chr3.1 exon 60935749 60936189 60935749 ID=MS.gene52369.t1.exon4;Parent=MS.gene52369.t1
chr3.1 CDS 60935749 60936189 60935749 ID=cds.MS.gene52369.t1;Parent=MS.gene52369.t1
Gene Sequence

>MS.gene52369

ATGGCTGGTGGGGTATTTGCTGTGGATAGTACACCAGATGCTGCCATCAATATTGGTGGCAAGATAACACTCTCAATCATCATTACATGCATCGTTGCTGCTTCCGGTGGTCTTCTTTTTGGATATGACATTGGAATTTCAGGTTCACTTTGTTACAGATGAATTGTGTCACCTTATTATATTTGAATTACATTAGCAATCAAAATTATTGTCGAAATTTATTCTCATGATTTTGATGTTGTGAAAATGTCGAATTTCAGGAGGTGTCACAACGATGGTGCCCTTTCTTCAAAAATTCTTTCCAGATATTTTAAGGAAGGCGGCTGGTGCTGAAGTGAATATGTATTGTGTGTACGATAGTCAAACATTGACATTATTTACGTCTTCTCTTTATCTAGCTGGATTAGTGTCATCCCTTGCAGCTAGCAAAGTCACCGCGTGGTATGGTCGAAGAAACGTCATCATAATAGGTGGTGCCCTCTTTATTGTAGGTGGTGCTATTAATGGTGGTTCGGAAAATATTCCCATGCTCATTTTGGGTCGTGTTTTTCTCGGGTTTGGGGTCGGTTTCACTAATCAAGTAAGTCGCAAAACACTTTTTTTTGGGTAAATAATTAGTTTTTAATTTGGTAATATGCCTAAACAATCATTAATGTTGTATTGAACTTTAAAAACGATAACTAGATAAAAACAATAATTTTATGTAAAAAGGAGTAGAGGAGTCTAGTATCTCCTTATGTTCGTTTTACCTGTACCTCACTATAATTGTCTTGATATTTTTACCTATTTTTTTTTTTAAAAGACTCCTTTTAAATTTTCAACTGCATTAATTATTATTTTACCAACAGGCTGCACCATTGTATCTATCTGAAATTTCTCCCCCAAAATGGCGAGGCGCTTTTAGTACCGGCTTTCAATTCTTTTTGGGAGTTGGTGTAGTCGCTGCAGGCTGCATAAACTACGGCACCGCCAAGCACACATGGGGATGGAGACTCTCTCTTGGACTTGCAGTAGTGCCTGCAGTTGTAATGACAATTGGTTCCTTCCTCATAACGGACACCCCCAACAGCTTAGTCGAACGTGGTAAGATAGAGCAAGCCAAAAAAGCCTTACGCAAAATTAGAGGATCCTCCGTTGATATTGAACCTGAGTTAGAAGAACTTATTAAGTCGATAGAAATTGCAAAATCAGTGAAACAAGAGCCCTTTAAGACCATATTAAAAAGGGAGTATCGACCTCACTTGGTGATGGCATTTGCAATCCCACTTTTCCAACAACTTACCGGTATCAACATCGTCGCTTTCTATTCTCCTAATCTCTTCCATTCTGTGGGCTTGGGACATGACGGCGCTTTAATTTCTGCCATTGTACTTGGATCCGTTAGCCTTGTGTCTAACCTTATCTCTGCCGGTTTTGTTGACCGATTTGGTCGAAGAATCTTGTTCATAACCGGGGGCATTATGATGTTTGTCTGCTTGGTAAGTGAATTAACAACCTAACTATCTATTTATTAAATTTATTTTCAGTCATAACAAACTATAATATTCATGTGTCACCTACTAATTAAATTGTTTGTGTGAACAATGTGAAGATTGCTGTGTCCATTGTGCTAGCAGTGGTGTCTGGTGTTGATGGTACAAATGACATATCCAAGGGGAATGCAATATTAGTATTGGTGCTATTATGTTTATACTCTGCTGGTTTTGGTTGGTCGTGGGGCCCTCTAACATGGCTTATTCCAAGTGAGATTTTCCCTGTAAATATAAGAACCACAGGACAAAGCATAGCTATTGCTATACAGTTCATAATAGTATTTGTGCTATCACAAACATTCTTGACAATGTTATGTCACTTTAAGTTTGGAGCCTTCTTGTTCTATGCTGGTTGGGTTGTTGTGATGACTCTTTTTATTATATTTTTCTTGCCTGAGACTAAAGGAATTCCCTTGGATTCAATGTACACCATATGGGGAAAACATTGGTTTTGGTGTCGATTTGTTAAAGGAGAAGATGGTCAAGAAAATCATCCATGA

Protein sequence

>MS.gene52369.t1

MAGGVFAVDSTPDAAINIGGKITLSIIITCIVAASGGLLFGYDIGISGGVTTMVPFLQKFFPDILRKAAGAEVNMYCVYDSQTLTLFTSSLYLAGLVSSLAASKVTAWYGRRNVIIIGGALFIVGGAINGGSENIPMLILGRVFLGFGVGFTNQAAPLYLSEISPPKWRGAFSTGFQFFLGVGVVAAGCINYGTAKHTWGWRLSLGLAVVPAVVMTIGSFLITDTPNSLVERGKIEQAKKALRKIRGSSVDIEPELEELIKSIEIAKSVKQEPFKTILKREYRPHLVMAFAIPLFQQLTGINIVAFYSPNLFHSVGLGHDGALISAIVLGSVSLVSNLISAGFVDRFGRRILFITGGIMMFVCLIAVSIVLAVVSGVDGTNDISKGNAILVLVLLCLYSAGFGWSWGPLTWLIPSEIFPVNIRTTGQSIAIAIQFIIVFVLSQTFLTMLCHFKFGAFLFYAGWVVVMTLFIIFFLPETKGIPLDSMYTIWGKHWFWCRFVKGEDGQENHP