AlfalfaGEDB | MS.gene52371

M. sativa cultivar XinJiangDaYe / MS.gene52371

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52371.t1	XP_024635482.1	92.6	447	19	1	1	433	1	447	3.00E-223	784.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52371.t1	Q93Y91	57.5	449	172	4	1	432	1	447	2.0e-135	483.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52371.t1	A0A396IVA9	92.6	447	19	1	1	433	1	447	2.2e-223	784.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049549	MS.gene52371	0.815779	7.76E-52	-1.69E-46
MS.gene050096	MS.gene52371	0.820277	7.47E-53	-1.69E-46
MS.gene050404	MS.gene52371	-0.803063	4.17E-49	-1.69E-46
MS.gene050406	MS.gene52371	-0.809684	1.68E-50	-1.69E-46
MS.gene050529	MS.gene52371	-0.817949	2.53E-52	-1.69E-46
MS.gene05105	MS.gene52371	-0.805668	1.19E-49	-1.69E-46
MS.gene051158	MS.gene52371	0.80979	1.59E-50	-1.69E-46
MS.gene052188	MS.gene52371	-0.822588	2.19E-53	-1.69E-46
MS.gene052223	MS.gene52371	0.801946	7.08E-49	-1.69E-46
MS.gene052310	MS.gene52371	-0.802259	6.11E-49	-1.69E-46
MS.gene05233	MS.gene52371	0.806017	1.01E-49	-1.69E-46
MS.gene052340	MS.gene52371	-0.807679	4.49E-50	-1.69E-46
MS.gene05240	MS.gene52371	0.843095	1.73E-58	-1.69E-46
MS.gene05244	MS.gene52371	0.80745	5.03E-50	-1.69E-46
MS.gene053031	MS.gene52371	0.839478	1.55E-57	-1.69E-46
MS.gene053406	MS.gene52371	0.838972	2.09E-57	-1.69E-46
MS.gene053557	MS.gene52371	-0.80788	4.07E-50	-1.69E-46
MS.gene053912	MS.gene52371	-0.80648	8.06E-50	-1.69E-46
MS.gene054181	MS.gene52371	0.819783	9.69E-53	-1.69E-46
MS.gene054290	MS.gene52371	0.800419	1.45E-48	-1.69E-46
MS.gene054421	MS.gene52371	0.842776	2.10E-58	-1.69E-46
MS.gene054742	MS.gene52371	0.836952	6.92E-57	-1.69E-46
MS.gene055116	MS.gene52371	-0.806646	7.43E-50	-1.69E-46
MS.gene055601	MS.gene52371	0.815448	9.20E-52	-1.69E-46
MS.gene056609	MS.gene52371	-0.804335	2.27E-49	-1.69E-46
MS.gene056899	MS.gene52371	0.805263	1.45E-49	-1.69E-46
MS.gene056920	MS.gene52371	0.824093	9.73E-54	-1.69E-46
MS.gene057749	MS.gene52371	-0.801531	8.62E-49	-1.69E-46
MS.gene058218	MS.gene52371	0.828255	9.95E-55	-1.69E-46
MS.gene058660	MS.gene52371	-0.804891	1.74E-49	-1.69E-46
MS.gene058928	MS.gene52371	-0.808404	3.15E-50	-1.69E-46
MS.gene059294	MS.gene52371	-0.812764	3.60E-51	-1.69E-46
MS.gene059402	MS.gene52371	0.835014	2.15E-56	-1.69E-46
MS.gene059955	MS.gene52371	0.815239	1.02E-51	-1.69E-46
MS.gene060087	MS.gene52371	0.804571	2.03E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene52371	MS.gene30558	PPI
MS.gene055771	MS.gene52371	PPI
MS.gene25807	MS.gene52371	PPI
MS.gene52371	MS.gene003775	PPI
MS.gene52371	MS.gene78328	PPI
MS.gene52371	MS.gene29303	PPI
MS.gene52371	MS.gene004000	PPI
MS.gene52371	MS.gene069970	PPI
MS.gene058372	MS.gene52371	PPI
MS.gene52371	MS.gene044198	PPI
MS.gene78329	MS.gene52371	PPI
MS.gene52371	MS.gene018043	PPI
MS.gene52371	MS.gene014297	PPI
MS.gene52371	MS.gene013049	PPI
MS.gene70727	MS.gene52371	PPI
MS.gene062929	MS.gene52371	PPI
MS.gene52371	MS.gene78842	PPI
MS.gene52737	MS.gene52371	PPI
MS.gene52371	MS.gene003641	PPI
MS.gene065882	MS.gene52371	PPI
MS.gene52371	MS.gene066531	PPI
MS.gene018060	MS.gene52371	PPI
MS.gene52371	MS.gene031757	PPI
MS.gene52371	MS.gene48433	PPI
MS.gene52371	MS.gene04695	PPI
MS.gene56212	MS.gene52371	PPI
MS.gene29304	MS.gene52371	PPI
MS.gene78327	MS.gene52371	PPI
MS.gene52371	MS.gene056687	PPI
MS.gene52371	MS.gene41130	PPI
MS.gene020412	MS.gene52371	PPI
MS.gene52371	MS.gene56211	PPI
MS.gene50704	MS.gene52371	PPI
MS.gene52371	MS.gene072437	PPI
MS.gene052174	MS.gene52371	PPI
MS.gene055946	MS.gene52371	PPI
MS.gene52371	MS.gene031671	PPI
MS.gene52371	MS.gene066530	PPI
MS.gene31419	MS.gene52371	PPI
MS.gene52371	MS.gene072436	PPI
MS.gene064881	MS.gene52371	PPI
MS.gene52371	MS.gene009409	PPI
MS.gene021157	MS.gene52371	PPI
MS.gene066532	MS.gene52371	PPI
MS.gene52371	MS.gene72918	PPI
MS.gene065799	MS.gene52371	PPI
MS.gene52371	MS.gene006634	PPI
MS.gene50065	MS.gene52371	PPI
MS.gene52371	MS.gene04694	PPI
MS.gene52371	MS.gene006546	PPI
MS.gene52371	MS.gene23356	PPI
MS.gene52371	MS.gene45698	PPI
MS.gene006547	MS.gene52371	PPI
MS.gene52371	MS.gene66840	PPI
MS.gene04674	MS.gene52371	PPI
MS.gene52371	MS.gene52719	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52371.t1	MTR_3g074390	86.860	449	43	2	1	433	1	449	0.0	769
MS.gene52371.t1	MTR_3g074410	76.510	447	90	2	1	433	1	446	0.0	686
MS.gene52371.t1	MTR_3g074380	90.437	366	21	1	1	352	1	366	0.0	658
MS.gene52371.t1	MTR_3g074270	62.864	447	128	5	1	433	1	423	0.0	555
MS.gene52371.t1	MTR_3g074400	62.374	396	101	5	53	433	1	363	3.81e-158	453
MS.gene52371.t1	MTR_3g008160	50.000	440	198	7	12	433	9	444	1.65e-149	434
MS.gene52371.t1	MTR_3g074370	77.308	260	59	0	174	433	18	277	5.72e-149	427
MS.gene52371.t1	MTR_3g074340	77.308	260	59	0	174	433	18	277	6.59e-149	427
MS.gene52371.t1	MTR_3g074320	76.923	260	60	0	174	433	18	277	2.26e-148	425
MS.gene52371.t1	MTR_5g006070	47.806	433	203	7	20	433	16	444	2.17e-143	419
MS.gene52371.t1	MTR_3g008170	49.095	442	203	7	10	433	8	445	3.41e-142	416
MS.gene52371.t1	MTR_0204s0020	47.465	434	209	5	15	433	10	439	1.24e-141	414
MS.gene52371.t1	MTR_5g082540	48.372	430	204	4	20	433	17	444	1.02e-140	412
MS.gene52371.t1	MTR_1g038630	46.279	430	213	4	20	433	17	444	6.07e-140	410
MS.gene52371.t1	MTR_5g094760	48.884	448	209	6	1	432	1	444	3.70e-139	408
MS.gene52371.t1	MTR_5g041550	45.575	452	222	7	1	433	1	447	9.27e-139	407
MS.gene52371.t1	MTR_7g091690	50.000	428	195	5	20	432	21	444	8.46e-138	404
MS.gene52371.t1	MTR_0204s0020	46.774	434	209	6	15	433	10	436	2.01e-137	403
MS.gene52371.t1	MTR_3g093010	46.000	450	218	7	1	431	1	444	3.53e-136	400
MS.gene52371.t1	MTR_0204s0040	47.086	429	208	6	20	433	23	447	3.47e-135	398
MS.gene52371.t1	MTR_4g116770	47.086	429	208	6	20	433	219	643	7.49e-133	398
MS.gene52371.t1	MTR_4g091370	47.796	431	205	6	20	432	17	445	2.96e-132	391
MS.gene52371.t1	MTR_1g104780	46.081	421	204	7	32	433	28	444	3.89e-132	390
MS.gene52371.t1	MTR_3g008160	49.373	399	180	7	53	433	1	395	5.13e-132	388
MS.gene52371.t1	MTR_4g116790	46.853	429	209	5	20	433	21	445	1.20e-131	389
MS.gene52371.t1	MTR_3g023480	44.647	439	220	7	13	431	8	443	5.17e-131	387
MS.gene52371.t1	MTR_0009s0370	44.695	443	224	6	8	431	3	443	1.54e-130	386
MS.gene52371.t1	MTR_1g104770	43.681	451	230	7	1	433	1	445	4.98e-129	382
MS.gene52371.t1	MTR_4g090600	47.917	432	205	6	20	433	17	446	7.66e-127	377
MS.gene52371.t1	MTR_1g038600	43.925	428	208	5	20	433	17	426	4.36e-126	374
MS.gene52371.t1	MTR_1g104750	43.459	451	230	8	1	433	1	444	1.15e-125	373
MS.gene52371.t1	MTR_5g006070	46.250	400	192	7	53	433	1	396	1.73e-125	372
MS.gene52371.t1	MTR_3g093060	45.636	401	196	7	53	433	1	399	1.16e-124	369
MS.gene52371.t1	MTR_6g087040	44.321	449	229	8	1	432	1	445	9.22e-124	369
MS.gene52371.t1	MTR_6g088375	44.321	449	229	8	1	432	1	445	9.22e-124	369
MS.gene52371.t1	MTR_8g102860	45.688	429	212	8	21	432	21	445	1.65e-123	369
MS.gene52371.t1	MTR_3g007910	42.667	450	205	9	1	433	1	414	1.47e-117	352
MS.gene52371.t1	MTR_8g102860	44.584	397	199	8	53	432	1	393	1.51e-109	331
MS.gene52371.t1	MTR_4g116790	46.974	347	167	4	20	351	21	365	3.90e-107	322
MS.gene52371.t1	MTR_3g074330	70.760	171	40	2	1	164	1	168	4.07e-74	230
MS.gene52371.t1	MTR_3g074360	70.760	171	40	2	1	164	1	168	4.07e-74	230
MS.gene52371.t1	MTR_3g074310	70.175	171	41	2	1	164	1	168	2.42e-73	228
MS.gene52371.t1	MTR_4g072030	29.452	438	250	13	30	433	31	443	3.77e-43	159
MS.gene52371.t1	MTR_4g069500	27.854	438	258	10	30	433	34	447	1.31e-41	154
MS.gene52371.t1	MTR_4g069500	29.570	372	223	8	96	433	31	397	2.78e-41	152
MS.gene52371.t1	MTR_6g088450	28.404	426	260	10	31	433	63	466	1.76e-40	151
MS.gene52371.t1	MTR_8g103500	25.792	442	280	10	17	433	9	427	7.11e-39	146
MS.gene52371.t1	MTR_2g013310	28.372	430	259	10	27	433	53	456	2.27e-38	145
MS.gene52371.t1	MTR_2g013310	29.683	347	215	6	91	415	26	365	8.35e-38	143
MS.gene52371.t1	MTR_3g116240	27.500	440	259	14	30	433	32	447	1.69e-37	143
MS.gene52371.t1	MTR_8g077890	30.548	383	217	10	91	433	65	438	2.31e-37	142
MS.gene52371.t1	MTR_5g096000	51.299	154	53	3	1	154	1	132	9.99e-36	134
MS.gene52371.t1	MTR_5g096000	40.426	94	51	2	345	433	152	245	7.82e-16	78.2
MS.gene52371.t1	MTR_0064s0040	47.586	145	63	2	20	163	18	150	1.66e-35	129
MS.gene52371.t1	MTR_5g075300	26.304	441	261	11	31	433	24	438	2.34e-32	128
MS.gene52371.t1	MTR_4g077740	26.478	423	259	12	27	421	46	444	2.43e-32	128
MS.gene52371.t1	MTR_8g077310	25.000	424	278	6	21	430	42	439	2.75e-32	128
MS.gene52371.t1	MTR_7g446340	24.943	437	273	12	23	433	51	458	8.17e-32	127
MS.gene52371.t1	MTR_6g007340	24.943	437	273	12	23	433	51	458	8.17e-32	127
MS.gene52371.t1	MTR_8g077310	25.788	349	238	3	96	430	1	342	7.22e-31	122
MS.gene52371.t1	MTR_8g077300	25.833	360	246	3	85	430	79	431	7.48e-30	121
MS.gene52371.t1	MTR_6g018790	24.249	433	276	8	20	433	99	498	4.13e-29	119
MS.gene52371.t1	MTR_1g038620	35.429	175	88	4	181	349	35	190	4.22e-29	112
MS.gene52371.t1	MTR_2g049020	27.168	346	207	7	36	357	36	360	2.86e-28	117
MS.gene52371.t1	MTR_7g082270	23.990	421	268	9	32	433	71	458	3.54e-28	116
MS.gene52371.t1	MTR_5g020270	24.586	423	277	7	23	430	47	442	2.42e-27	114
MS.gene52371.t1	MTR_5g020270	26.571	350	234	5	96	430	1	342	3.62e-27	112
MS.gene52371.t1	MTR_7g082270	23.472	409	261	9	32	421	71	446	3.53e-26	110
MS.gene52371.t1	MTR_7g094450	26.359	368	237	10	82	431	77	428	4.45e-26	110
MS.gene52371.t1	MTR_4g069500	27.757	263	167	4	189	433	1	258	9.63e-26	107
MS.gene52371.t1	MTR_2g048720	26.627	338	212	7	36	354	36	356	1.61e-25	109
MS.gene52371.t1	MTR_5g019870	25.195	385	238	12	93	433	57	435	5.81e-25	107
MS.gene52371.t1	MTR_1g022315	24.706	340	226	5	96	416	1	329	4.21e-24	103
MS.gene52371.t1	MTR_1g022315	24.786	351	234	5	85	416	89	428	4.32e-24	104
MS.gene52371.t1	MTR_2g020710	24.586	362	244	7	86	431	1	349	5.68e-24	103
MS.gene52371.t1	MTR_2g020710	22.870	446	290	10	8	431	25	438	6.43e-24	104
MS.gene52371.t1	MTR_1g116660	24.408	422	275	11	32	433	41	438	1.17e-23	103
MS.gene52371.t1	MTR_7g094110	26.849	365	233	9	85	431	82	430	1.38e-23	103
MS.gene52371.t1	MTR_4g118610	23.757	362	249	6	85	431	92	441	2.00e-23	102
MS.gene52371.t1	MTR_2g026140	26.190	336	218	8	32	355	30	347	3.17e-23	102
MS.gene52371.t1	MTR_8g077310	24.355	349	224	6	21	355	42	364	3.47e-23	101
MS.gene52371.t1	MTR_3g084110	22.300	426	277	10	33	433	35	431	1.65e-22	100
MS.gene52371.t1	MTR_7g113960	23.168	423	272	9	26	431	27	413	4.88e-22	98.6
MS.gene52371.t1	MTR_7g005910	24.048	420	278	10	32	433	39	435	1.11e-21	97.8
MS.gene52371.t1	MTR_7g113970	22.376	362	253	6	85	431	102	450	4.71e-21	95.9
MS.gene52371.t1	MTR_1g116650	24.648	426	266	13	28	433	78	468	1.82e-20	94.0
MS.gene52371.t1	MTR_6g087910	22.424	330	230	7	110	425	117	434	4.06e-20	92.8
MS.gene52371.t1	MTR_5g020270	22.695	423	264	8	23	430	47	421	5.55e-20	92.4
MS.gene52371.t1	MTR_4g013205	24.779	339	225	6	110	432	103	427	1.74e-19	90.9
MS.gene52371.t1	MTR_2g026160	25.000	352	224	8	33	361	34	368	3.25e-19	90.5
MS.gene52371.t1	MTR_2g020710	23.295	352	222	8	8	338	25	349	1.38e-18	87.8
MS.gene52371.t1	MTR_2g020710	23.295	352	222	8	8	338	25	349	1.41e-18	87.8
MS.gene52371.t1	MTR_2g020710	25.556	270	178	5	84	338	88	349	2.19e-18	86.7
MS.gene52371.t1	MTR_7g094110	25.549	364	219	9	85	431	82	410	1.94e-17	84.7
MS.gene52371.t1	MTR_4g064820	27.273	363	216	14	25	357	95	439	2.06e-17	84.7
MS.gene52371.t1	MTR_4g118610	22.687	335	232	6	84	403	91	413	2.89e-17	84.0
MS.gene52371.t1	MTR_5g077580	24.316	329	196	5	147	433	189	506	4.04e-16	80.9
MS.gene52371.t1	MTR_3g080240	23.934	422	268	14	31	432	98	486	1.97e-15	78.6
MS.gene52371.t1	MTR_7g113960	22.492	329	214	5	26	340	27	328	9.51e-14	72.8
MS.gene52371.t1	MTR_7g113970	20.741	270	200	3	85	344	102	367	1.35e-13	72.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52371.t1	AT1G34580	57.461	449	172	4	1	432	1	447	9.65e-177	504
MS.gene52371.t1	AT1G34580	56.675	397	155	3	53	432	1	397	7.71e-155	446
MS.gene52371.t1	AT1G11260	50.000	432	196	6	20	433	17	446	3.67e-148	432
MS.gene52371.t1	AT3G19930	49.220	449	207	6	1	433	1	444	8.92e-146	425
MS.gene52371.t1	AT3G19930	49.220	449	207	6	1	433	1	444	8.92e-146	425
MS.gene52371.t1	AT4G21480	49.312	436	203	5	13	432	10	443	3.98e-144	421
MS.gene52371.t1	AT5G26340	47.228	451	214	8	1	433	1	445	3.86e-143	419
MS.gene52371.t1	AT3G19940	47.884	449	215	6	1	433	1	446	5.94e-142	416
MS.gene52371.t1	AT4G02050	46.205	448	221	6	1	432	1	444	6.15e-140	410
MS.gene52371.t1	AT4G02050	46.205	448	221	6	1	432	1	444	6.15e-140	410
MS.gene52371.t1	AT1G50310	48.000	450	214	7	1	433	1	447	5.94e-139	408
MS.gene52371.t1	AT5G23270	48.747	439	201	8	1	420	1	434	2.29e-136	401
MS.gene52371.t1	AT5G61520	44.111	433	217	6	19	430	17	445	1.58e-123	369
MS.gene52371.t1	AT1G77210	43.430	449	233	8	1	432	1	445	1.89e-123	368
MS.gene52371.t1	AT1G77210	43.430	449	233	8	1	432	1	445	1.89e-123	368
MS.gene52371.t1	AT3G05960	43.357	429	224	5	20	433	15	439	2.44e-117	352
MS.gene52371.t1	AT5G26250	42.191	429	229	5	20	433	16	440	1.67e-116	350
MS.gene52371.t1	AT1G07340	43.619	431	219	7	21	433	18	442	7.44e-114	343
MS.gene52371.t1	AT5G61520	42.750	400	204	6	52	430	2	397	3.33e-107	325
MS.gene52371.t1	AT1G50310	48.387	279	140	4	157	433	28	304	9.48e-89	275
MS.gene52371.t1	AT1G77210	41.392	273	154	6	162	432	28	296	2.20e-72	232
MS.gene52371.t1	AT2G16120	28.604	437	258	10	30	433	30	445	1.37e-41	154
MS.gene52371.t1	AT3G18830	27.397	438	259	11	30	432	40	453	9.31e-41	152
MS.gene52371.t1	AT2G16130	28.604	437	258	10	30	433	30	445	1.22e-40	152
MS.gene52371.t1	AT2G18480	28.538	431	244	13	40	433	36	439	3.99e-38	145
MS.gene52371.t1	AT4G36670	26.471	442	260	12	30	433	21	435	5.85e-34	133
MS.gene52371.t1	AT2G20780	26.253	419	252	14	23	415	51	438	5.73e-31	125
MS.gene52371.t1	AT1G08900	28.736	348	216	7	85	415	23	355	1.88e-30	122
MS.gene52371.t1	AT1G08900	28.736	348	216	7	85	415	65	397	2.29e-30	122
MS.gene52371.t1	AT1G75220	24.408	422	279	5	23	430	45	440	2.33e-30	122
MS.gene52371.t1	AT1G08900	28.736	348	216	7	85	415	57	389	2.68e-30	122
MS.gene52371.t1	AT1G08900	28.736	348	216	7	85	415	65	397	3.40e-30	122
MS.gene52371.t1	AT1G08900	28.736	348	216	7	85	415	65	397	3.40e-30	122
MS.gene52371.t1	AT2G20780	26.781	351	220	10	90	415	42	380	2.04e-29	120
MS.gene52371.t1	AT1G30220	27.920	351	209	8	33	363	35	361	4.28e-28	117
MS.gene52371.t1	AT5G16150	23.991	446	285	9	9	433	86	498	6.25e-28	116
MS.gene52371.t1	AT5G16150	23.991	446	285	9	9	433	86	498	6.25e-28	116
MS.gene52371.t1	AT5G16150	23.991	446	285	9	9	433	86	498	6.25e-28	116
MS.gene52371.t1	AT3G05400	26.738	374	236	7	85	432	66	427	1.66e-27	114
MS.gene52371.t1	AT5G17010	26.603	421	261	9	27	421	48	446	1.80e-27	114
MS.gene52371.t1	AT5G17010	26.603	421	261	9	27	421	48	446	1.80e-27	114
MS.gene52371.t1	AT5G17010	26.603	421	261	9	27	421	48	446	1.80e-27	114
MS.gene52371.t1	AT2G48020	26.027	365	238	9	84	431	67	416	2.09e-27	114
MS.gene52371.t1	AT2G48020	26.027	365	238	9	84	431	67	416	2.09e-27	114
MS.gene52371.t1	AT1G19450	24.940	417	283	7	23	430	46	441	1.08e-26	112
MS.gene52371.t1	AT3G05165	24.818	411	260	8	21	415	25	402	2.30e-26	111
MS.gene52371.t1	AT3G05165	24.818	411	260	8	21	415	25	402	2.30e-26	111
MS.gene52371.t1	AT3G05165	24.818	411	260	8	21	415	25	402	2.30e-26	111
MS.gene52371.t1	AT3G05165	24.818	411	260	8	21	415	25	402	3.27e-26	111
MS.gene52371.t1	AT3G05160	26.377	345	224	6	87	415	14	344	3.93e-26	109
MS.gene52371.t1	AT3G05160	26.377	345	224	6	87	415	14	344	3.93e-26	109
MS.gene52371.t1	AT3G05160	24.818	411	260	8	21	415	16	393	4.11e-26	110
MS.gene52371.t1	AT3G05155	24.725	364	240	9	85	431	67	413	5.07e-26	110
MS.gene52371.t1	AT3G05165	24.818	411	260	8	21	415	25	402	5.13e-26	110
MS.gene52371.t1	AT3G05165	24.818	411	260	8	21	415	25	402	5.13e-26	110
MS.gene52371.t1	AT1G08890	26.608	342	231	5	85	415	67	399	1.34e-25	108
MS.gene52371.t1	AT1G54730	24.760	416	264	9	32	431	38	420	1.45e-25	108
MS.gene52371.t1	AT5G27350	24.940	417	264	8	21	421	26	409	1.48e-25	108
MS.gene52371.t1	AT5G59250	26.027	438	267	12	25	428	97	511	1.67e-25	109
MS.gene52371.t1	AT1G54730	24.760	416	264	9	32	431	38	420	2.48e-25	108
MS.gene52371.t1	AT3G05400	28.446	341	205	8	119	432	79	407	3.23e-25	107
MS.gene52371.t1	AT4G16480	25.641	390	228	9	3	358	4	365	6.92e-25	107
MS.gene52371.t1	AT4G16480	25.641	390	228	9	3	358	4	365	6.92e-25	107
MS.gene52371.t1	AT4G16480	25.641	390	228	9	3	358	4	365	6.92e-25	107
MS.gene52371.t1	AT1G08930	22.350	434	274	7	21	431	53	446	2.69e-24	105
MS.gene52371.t1	AT1G08930	22.350	434	274	7	21	431	53	446	2.69e-24	105
MS.gene52371.t1	AT3G03090	26.492	419	250	13	34	421	55	446	9.37e-23	100
MS.gene52371.t1	AT4G04750	24.863	366	241	6	85	431	76	426	3.00e-22	99.4
MS.gene52371.t1	AT4G04750	24.863	366	241	6	85	431	76	426	3.00e-22	99.4
MS.gene52371.t1	AT4G04750	24.863	366	241	6	85	431	120	470	5.05e-22	99.0
MS.gene52371.t1	AT4G04760	25.474	369	236	8	85	431	12	363	8.50e-22	97.4
MS.gene52371.t1	AT4G04760	25.474	369	236	8	85	431	71	422	8.95e-22	97.8
MS.gene52371.t1	AT1G54730	24.155	414	248	9	32	431	38	399	1.32e-21	96.7
MS.gene52371.t1	AT1G67300	25.000	352	219	9	99	425	107	438	1.34e-21	97.4
MS.gene52371.t1	AT5G27360	22.330	412	281	5	21	421	30	413	1.41e-21	97.1
MS.gene52371.t1	AT1G54730	24.155	414	248	9	32	431	38	399	1.70e-21	96.7
MS.gene52371.t1	AT5G27360	22.660	406	275	5	21	415	78	455	1.78e-21	97.1
MS.gene52371.t1	AT1G67300	25.568	352	216	9	99	425	107	437	2.91e-21	96.3
MS.gene52371.t1	AT1G67300	25.568	352	216	9	99	425	107	437	2.91e-21	96.3
MS.gene52371.t1	AT5G18840	22.973	370	244	7	84	431	83	433	6.27e-21	95.5
MS.gene52371.t1	AT1G79820	25.490	357	232	9	92	432	107	445	6.98e-21	95.1
MS.gene52371.t1	AT1G79820	25.490	357	232	9	92	432	107	445	6.98e-21	95.1
MS.gene52371.t1	AT1G67300	24.642	349	221	8	99	424	107	436	1.20e-20	94.4
MS.gene52371.t1	AT1G67300	24.642	349	221	8	99	424	107	436	1.20e-20	94.4
MS.gene52371.t1	AT2G43330	22.897	428	279	11	30	433	35	435	2.82e-20	93.6
MS.gene52371.t1	AT2G48020	26.460	291	190	7	85	359	68	350	4.96e-20	91.7
MS.gene52371.t1	AT1G54730	24.510	408	257	10	32	423	38	410	7.20e-20	91.7
MS.gene52371.t1	AT1G54730	24.510	408	257	10	32	423	38	410	7.20e-20	91.7
MS.gene52371.t1	AT5G27360	25.532	235	168	3	187	421	82	309	1.05e-19	90.5
MS.gene52371.t1	AT5G27360	25.532	235	168	3	187	421	82	309	1.05e-19	90.5
MS.gene52371.t1	AT1G79820	25.072	347	226	9	92	422	107	435	1.36e-19	91.3
MS.gene52371.t1	AT1G67300	25.146	342	214	8	99	417	107	429	1.73e-19	90.5
MS.gene52371.t1	AT1G67300	25.146	342	214	8	99	417	107	429	1.73e-19	90.5
MS.gene52371.t1	AT2G48020	25.461	271	180	5	84	340	67	329	3.51e-19	89.0
MS.gene52371.t1	AT3G05155	24.444	270	179	4	85	340	67	325	8.90e-19	87.4
MS.gene52371.t1	AT4G04760	23.978	367	241	8	85	431	71	419	1.15e-18	88.6
MS.gene52371.t1	AT2G35740	23.836	365	226	11	26	361	26	367	2.59e-18	87.8
MS.gene52371.t1	AT3G05150	22.654	437	288	12	12	431	21	424	4.35e-18	86.7
MS.gene52371.t1	AT3G05150	22.654	437	288	12	12	431	21	424	4.35e-18	86.7
MS.gene52371.t1	AT3G05150	22.654	437	288	12	12	431	21	424	6.29e-18	86.3
MS.gene52371.t1	AT1G54730	24.458	323	203	8	32	340	38	333	1.33e-17	84.0
MS.gene52371.t1	AT1G54730	24.832	298	186	6	32	315	38	311	9.00e-17	81.3
MS.gene52371.t1	AT1G54730	24.832	298	186	6	32	315	38	311	9.00e-17	81.3
MS.gene52371.t1	AT1G54730	24.832	298	186	6	32	315	38	311	1.72e-16	81.3
MS.gene52371.t1	AT3G20460	24.405	336	236	5	84	409	92	419	8.45e-16	79.7
MS.gene52371.t1	AT1G08920	23.158	380	242	8	85	432	72	433	2.00e-15	78.6
MS.gene52371.t1	AT5G27360	20.750	400	278	5	21	409	30	401	2.50e-15	78.2
MS.gene52371.t1	AT1G08920	22.792	351	233	7	85	415	72	404	1.05e-14	76.3
MS.gene52371.t1	AT1G08920	22.739	387	242	8	85	432	72	440	1.49e-14	75.9
MS.gene52371.t1	AT1G05030	22.857	420	273	12	32	432	85	472	6.24e-14	73.9
MS.gene52371.t1	AT1G05030	22.652	362	247	9	90	432	73	420	1.61e-13	72.8
MS.gene52371.t1	AT3G51490	23.016	252	160	8	25	260	3	236	3.05e-12	69.3
MS.gene52371.t1	AT3G51490	23.952	167	110	5	110	260	21	186	2.21e-11	66.2

Find 97 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATATTCCCATGCTCATTT+TGG	0.112731	3.1:+60967736	MS.gene52371:CDS
GGATATGACATTGGAATTTC+AGG	0.174947	3.1:+60967340	MS.gene52371:CDS
CCTGTGGTTCTTATATTTAC+AGG	0.188974	3.1:-60968971	None:intergenic
CCTTTAAGACCATATTAAAA+AGG	0.238402	3.1:+60968421	MS.gene52371:CDS
TGTTTATACTCTGCTGGTTT+TGG	0.264387	3.1:+60968902	MS.gene52371:CDS
GCCGCCTTCCTTAAAATATC+TGG	0.285888	3.1:-60967521	None:intergenic
CTCTTCCATTCTGTGGGCTT+GGG	0.308466	3.1:+60968534	MS.gene52371:CDS
TCTCTTCCATTCTGTGGGCT+TGG	0.312953	3.1:+60968533	MS.gene52371:CDS
CCAGATGCTGCCATCAATAT+TGG	0.323176	3.1:+60967253	MS.gene52371:CDS
ATTGTAGGTGGTGCTATTAA+TGG	0.325353	3.1:+60967704	MS.gene52371:CDS
CGAAGAATCTTGTTCATAAC+CGG	0.330741	3.1:+60968648	MS.gene52371:CDS
CGAAGAAACGTCATCATAAT+AGG	0.339968	3.1:+60967668	MS.gene52371:CDS
ACATGCATCGTTGCTGCTTC+CGG	0.358767	3.1:+60967304	MS.gene52371:CDS
CTATTATGTTTATACTCTGC+TGG	0.362807	3.1:+60968896	MS.gene52371:CDS
CATTATGATGTTTGTCTGCT+TGG	0.369746	3.1:+60968674	MS.gene52371:CDS
GGTGGTGCCCTCTTTATTGT+AGG	0.388549	3.1:+60967689	MS.gene52371:CDS
TATCTTGCCACCAATATTGA+TGG	0.389773	3.1:-60967263	None:intergenic
TTAATTTCTGCCATTGTACT+TGG	0.400667	3.1:+60968570	MS.gene52371:CDS
GCAGTGGTGTCTGGTGTTGA+TGG	0.402312	3.1:+60968830	MS.gene52371:CDS
AAAGCCTTACGCAAAATTAG+AGG	0.410530	3.1:+60968321	MS.gene52371:CDS
CCACGTTCGACTAAGCTGTT+GGG	0.414673	3.1:-60968279	None:intergenic
ACGTCTTCTCTTTATCTAGC+TGG	0.428341	3.1:+60967599	MS.gene52371:CDS
CCCACAGAATGGAAGAGATT+AGG	0.430797	3.1:-60968528	None:intergenic
CCAATATTGATGGCAGCATC+TGG	0.432816	3.1:-60967253	None:intergenic
CCTAATCTCTTCCATTCTGT+GGG	0.435539	3.1:+60968528	MS.gene52371:CDS
TCCTAATCTCTTCCATTCTG+TGG	0.440720	3.1:+60968527	MS.gene52371:CDS
ACCAAATCGGTCAACAAAAC+CGG	0.441925	3.1:-60968625	None:intergenic
ACCACGTTCGACTAAGCTGT+TGG	0.458442	3.1:-60968280	None:intergenic
TGTTGATACCGGTAAGTTGT+TGG	0.464630	3.1:-60968488	None:intergenic
GGAGTTGGTGTAGTCGCTGC+AGG	0.467474	3.1:+60968144	MS.gene52371:CDS
GTGTCTAACCTTATCTCTGC+CGG	0.472009	3.1:+60968606	MS.gene52371:CDS
GGTCGTGGGGCCCTCTAACA+TGG	0.478479	3.1:+60968927	MS.gene52371:CDS
CTGTGGTTCTTATATTTACA+GGG	0.480105	3.1:-60968970	None:intergenic
TACTAATATTGCATTCCCCT+TGG	0.480612	3.1:-60968867	None:intergenic
ATTGTGCTAGCAGTGGTGTC+TGG	0.481749	3.1:+60968821	MS.gene52371:CDS
CAACAAAACCGGCAGAGATA+AGG	0.483806	3.1:-60968614	None:intergenic
CCGGTAAGTTGTTGGAAAAG+TGG	0.489077	3.1:-60968480	None:intergenic
CCTGCAGTTGTAATGACAAT+TGG	0.493710	3.1:+60968234	MS.gene52371:CDS
CGGTAAGTTGTTGGAAAAGT+GGG	0.494424	3.1:-60968479	None:intergenic
CTTGGAATAAGCCATGTTAG+AGG	0.494856	3.1:-60968938	None:intergenic
TGGGGATGGAGACTCTCTCT+TGG	0.498033	3.1:+60968198	MS.gene52371:CDS
ACAAGATTCTTCGACCAAAT+CGG	0.499677	3.1:-60968638	None:intergenic
TCTCCATCCCCATGTGTGCT+TGG	0.503665	3.1:-60968187	None:intergenic
AATAGCTATGCTTTGTCCTG+TGG	0.505069	3.1:-60968987	None:intergenic
AGCAAAGTCACCGCGTGGTA+TGG	0.506861	3.1:+60967644	MS.gene52371:CDS
TTAATAAGTTCTTCTAACTC+AGG	0.509188	3.1:-60968363	None:intergenic
TGGTGCTATTAATGGTGGTT+CGG	0.511870	3.1:+60967712	MS.gene52371:CDS
CCATCCCCATGTGTGCTTGG+CGG	0.515790	3.1:-60968184	None:intergenic
GAAAGCGACGATGTTGATAC+CGG	0.516201	3.1:-60968499	None:intergenic
GGGGAATGCAATATTAGTAT+TGG	0.522711	3.1:+60968871	MS.gene52371:CDS
ACGGCACCGCCAAGCACACA+TGG	0.525868	3.1:+60968178	MS.gene52371:CDS
AATTGGTTCCTTCCTCATAA+CGG	0.526052	3.1:+60968251	MS.gene52371:CDS
CGGTGACTTTGCTAGCTGCA+AGG	0.530108	3.1:-60967634	None:intergenic
CCAATTGTCATTACAACTGC+AGG	0.530129	3.1:-60968234	None:intergenic
CACGTTCGACTAAGCTGTTG+GGG	0.538498	3.1:-60968278	None:intergenic
CCGCCAAGCACACATGGGGA+TGG	0.549134	3.1:+60968184	MS.gene52371:CDS
TAGCACCACCTACAATAAAG+AGG	0.553079	3.1:-60967697	None:intergenic
AAGGGAGTATCGACCTCACT+TGG	0.556645	3.1:+60968440	MS.gene52371:CDS
GGTGACTTTGCTAGCTGCAA+GGG	0.565981	3.1:-60967633	None:intergenic
TTTACAGGGAAAATCTCACT+TGG	0.566699	3.1:-60968956	None:intergenic
CATGTCCCAAGCCCACAGAA+TGG	0.569588	3.1:-60968539	None:intergenic
AACACGACCCAAAATGAGCA+TGG	0.570691	3.1:-60967744	None:intergenic
CCTGTAAATATAAGAACCAC+AGG	0.573263	3.1:+60968971	MS.gene52371:CDS
GGCTGGTGGGGTATTTGCTG+TGG	0.574846	3.1:+60967222	MS.gene52371:CDS
TCTGTGGGCTTGGGACATGA+CGG	0.580489	3.1:+60968543	MS.gene52371:CDS
GATGCTGCCATCAATATTGG+TGG	0.590546	3.1:+60967256	MS.gene52371:CDS
AGCACCACCTACAATAAAGA+GGG	0.594655	3.1:-60967696	None:intergenic
GGTGCCCTCTTTATTGTAGG+TGG	0.596173	3.1:+60967692	MS.gene52371:CDS
TTGGAATAAGCCATGTTAGA+GGG	0.596308	3.1:-60968937	None:intergenic
GAAGAATCTTGTTCATAACC+GGG	0.599176	3.1:+60968649	MS.gene52371:CDS
GACAAACATCATAATGCCCC+CGG	0.601203	3.1:-60968667	None:intergenic
GTATCGACCTCACTTGGTGA+TGG	0.602567	3.1:+60968446	MS.gene52371:CDS
TAACTCAGGTTCAATATCAA+CGG	0.603300	3.1:-60968349	None:intergenic
TGCATCGTTGCTGCTTCCGG+TGG	0.604561	3.1:+60967307	MS.gene52371:CDS
TGGTACAAATGACATATCCA+AGG	0.605738	3.1:+60968850	MS.gene52371:CDS
CGGCACCGCCAAGCACACAT+GGG	0.606397	3.1:+60968179	MS.gene52371:CDS
GCAAATGCCATCACCAAGTG+AGG	0.611968	3.1:-60968453	None:intergenic
CAGAGATAAGGTTAGACACA+AGG	0.612076	3.1:-60968602	None:intergenic
GTAGGTGGTGCTATTAATGG+TGG	0.614602	3.1:+60967707	MS.gene52371:CDS
AAGGTTAGACACAAGGCTAA+CGG	0.616354	3.1:-60968595	None:intergenic
ACACGACCCAAAATGAGCAT+GGG	0.620677	3.1:-60967743	None:intergenic
GGTACAAATGACATATCCAA+GGG	0.626581	3.1:+60968851	MS.gene52371:CDS
AAGAATCTTGTTCATAACCG+GGG	0.636667	3.1:+60968650	MS.gene52371:CDS
GGCACCGCCAAGCACACATG+GGG	0.639282	3.1:+60968180	MS.gene52371:CDS
CCCAACAGCTTAGTCGAACG+TGG	0.654800	3.1:+60968279	MS.gene52371:CDS
TTCAGGAGGTGTCACAACGA+TGG	0.658741	3.1:+60967475	MS.gene52371:intron
AGAATCTTGTTCATAACCGG+GGG	0.669322	3.1:+60968651	MS.gene52371:CDS
CTCAGGTTCAATATCAACGG+AGG	0.672066	3.1:-60968346	None:intergenic
AGAAACGTCATCATAATAGG+TGG	0.673000	3.1:+60967671	MS.gene52371:CDS
GCTGCAGGCTGCATAAACTA+CGG	0.674975	3.1:+60968159	MS.gene52371:CDS
TGTGTCCATTGTGCTAGCAG+TGG	0.678099	3.1:+60968814	MS.gene52371:CDS
AGACACCACTGCTAGCACAA+TGG	0.679999	3.1:-60968819	None:intergenic
GCTAACGGATCCAAGTACAA+TGG	0.704332	3.1:-60968580	None:intergenic
CAGCTAGCAAAGTCACCGCG+TGG	0.728015	3.1:+60967639	MS.gene52371:CDS
ACGTTCGACTAAGCTGTTGG+GGG	0.743564	3.1:-60968277	None:intergenic
GTACAAATGACATATCCAAG+GGG	0.751900	3.1:+60968852	MS.gene52371:CDS
GTTTCTTCGACCATACCACG+CGG	0.876756	3.1:-60967654	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATGTAATTCAAATATAATA+AGG	-	chr3.1:60967394-60967413	None:intergenic	10.0%
!!	AATTTAATAAATAGATAGTT+AGG	-	chr3.1:60968715-60968734	None:intergenic	10.0%
!!!	AACAATAATTTTATGTAAAA+AGG	+	chr3.1:60967909-60967928	MS.gene52371:intron	10.0%
!!!	GAGTCTTTTAAAAAAAAAAT+AGG	-	chr3.1:60968005-60968024	None:intergenic	15.0%
!!!	TTAATTATTATTTTACCAAC+AGG	+	chr3.1:60968045-60968064	MS.gene52371:intron	15.0%
!!	AATGCAGTTGAAAATTTAAA+AGG	-	chr3.1:60968027-60968046	None:intergenic	20.0%
!!	ACACAAACAATTTAATTAGT+AGG	-	chr3.1:60968776-60968795	None:intergenic	20.0%
!!	TACAACATTAATGATTGTTT+AGG	-	chr3.1:60967860-60967879	None:intergenic	20.0%
!!!	AATTCTTTCCAGATATTTTA+AGG	+	chr3.1:60967513-60967532	MS.gene52371:CDS	20.0%
!!!	CTTTAAGACCATATTAAAAA+GGG	+	chr3.1:60968422-60968441	MS.gene52371:CDS	20.0%
!!!	CTTTTTAATATGGTCTTAAA+GGG	-	chr3.1:60968423-60968442	None:intergenic	20.0%
!	GAAATTTCAGATAGATACAA+TGG	-	chr3.1:60968076-60968095	None:intergenic	25.0%
!	TTAATAAGTTCTTCTAACTC+AGG	-	chr3.1:60968366-60968385	None:intergenic	25.0%
!!	TTTTATGTAAAAAGGAGTAG+AGG	+	chr3.1:60967917-60967936	MS.gene52371:intron	25.0%
!!!	CCTTTAAGACCATATTAAAA+AGG	+	chr3.1:60968421-60968440	MS.gene52371:CDS	25.0%
!!!	CCTTTTTAATATGGTCTTAA+AGG	-	chr3.1:60968424-60968443	None:intergenic	25.0%
!!!	GGAAAGAATTTTTGAAGAAA+GGG	-	chr3.1:60967503-60967522	None:intergenic	25.0%
!!!	TGGAAAGAATTTTTGAAGAA+AGG	-	chr3.1:60967504-60967523	None:intergenic	25.0%
	ATCTCAAGACAATTATAGTG+AGG	-	chr3.1:60967977-60967996	None:intergenic	30.0%
	CTATTATGTTTATACTCTGC+TGG	+	chr3.1:60968896-60968915	MS.gene52371:CDS	30.0%
	CTGTGGTTCTTATATTTACA+GGG	-	chr3.1:60968973-60968992	None:intergenic	30.0%
	TAACTCAGGTTCAATATCAA+CGG	-	chr3.1:60968352-60968371	None:intergenic	30.0%
	TTAATTTCTGCCATTGTACT+TGG	+	chr3.1:60968570-60968589	MS.gene52371:CDS	30.0%
	TTGTGAAAATGTCGAATTTC+AGG	+	chr3.1:60967458-60967477	MS.gene52371:intron	30.0%
!	AAATATTCCCATGCTCATTT+TGG	+	chr3.1:60967736-60967755	MS.gene52371:CDS	30.0%
!	AATATTCCCATGCTCATTTT+GGG	+	chr3.1:60967737-60967756	MS.gene52371:CDS	30.0%
!	AATTTTGCGTAAGGCTTTTT+TGG	-	chr3.1:60968319-60968338	None:intergenic	30.0%
!	CTTCTTTTTGGATATGACAT+TGG	+	chr3.1:60967331-60967350	MS.gene52371:CDS	30.0%
!	TCGATACTCCCTTTTTAATA+TGG	-	chr3.1:60968433-60968452	None:intergenic	30.0%
!!	CTTTCCAGATATTTTAAGGA+AGG	+	chr3.1:60967517-60967536	MS.gene52371:CDS	30.0%
!!	TTTCAATTCTTTTTGGGAGT+TGG	+	chr3.1:60968129-60968148	MS.gene52371:CDS	30.0%
!!!	AGTCGCAAAACACTTTTTTT+TGG	+	chr3.1:60967803-60967822	MS.gene52371:intron	30.0%
!!!	GTCGCAAAACACTTTTTTTT+GGG	+	chr3.1:60967804-60967823	MS.gene52371:intron	30.0%
	AAAGCCTTACGCAAAATTAG+AGG	+	chr3.1:60968321-60968340	MS.gene52371:CDS	35.0%
	AAGAATCTTGTTCATAACCG+GGG	+	chr3.1:60968650-60968669	MS.gene52371:CDS	35.0%
	ACAAGATTCTTCGACCAAAT+CGG	-	chr3.1:60968641-60968660	None:intergenic	35.0%
	AGAAACGTCATCATAATAGG+TGG	+	chr3.1:60967671-60967690	MS.gene52371:CDS	35.0%
	AGACAATTATAGTGAGGTAC+AGG	-	chr3.1:60967971-60967990	None:intergenic	35.0%
	ATATCCAAAAAGAAGACCAC+CGG	-	chr3.1:60967326-60967345	None:intergenic	35.0%
	CATTATGATGTTTGTCTGCT+TGG	+	chr3.1:60968674-60968693	MS.gene52371:CDS	35.0%
	CCTGTAAATATAAGAACCAC+AGG	+	chr3.1:60968971-60968990	MS.gene52371:CDS	35.0%
	CCTGTGGTTCTTATATTTAC+AGG	-	chr3.1:60968974-60968993	None:intergenic	35.0%
	CGAAGAAACGTCATCATAAT+AGG	+	chr3.1:60967668-60967687	MS.gene52371:CDS	35.0%
	CGAAGAATCTTGTTCATAAC+CGG	+	chr3.1:60968648-60968667	MS.gene52371:CDS	35.0%
	GAAGAATCTTGTTCATAACC+GGG	+	chr3.1:60968649-60968668	MS.gene52371:CDS	35.0%
	GGATATGACATTGGAATTTC+AGG	+	chr3.1:60967340-60967359	MS.gene52371:CDS	35.0%
	GGGGAATGCAATATTAGTAT+TGG	+	chr3.1:60968871-60968890	MS.gene52371:CDS	35.0%
	GGTACAAATGACATATCCAA+GGG	+	chr3.1:60968851-60968870	MS.gene52371:CDS	35.0%
	GTACAAATGACATATCCAAG+GGG	+	chr3.1:60968852-60968871	MS.gene52371:CDS	35.0%
	GTACAGGTAAAACGAACATA+AGG	-	chr3.1:60967955-60967974	None:intergenic	35.0%
	TACTAATATTGCATTCCCCT+TGG	-	chr3.1:60968870-60968889	None:intergenic	35.0%
	TATCTTGCCACCAATATTGA+TGG	-	chr3.1:60967266-60967285	None:intergenic	35.0%
	TCCCAAAAAGAATTGAAAGC+CGG	-	chr3.1:60968127-60968146	None:intergenic	35.0%
	TGAAAATGTCGAATTTCAGG+AGG	+	chr3.1:60967461-60967480	MS.gene52371:intron	35.0%
	TGGTACAAATGACATATCCA+AGG	+	chr3.1:60968850-60968869	MS.gene52371:CDS	35.0%
	TTGGAATAAGCCATGTTAGA+GGG	-	chr3.1:60968940-60968959	None:intergenic	35.0%
	TTTACAGGGAAAATCTCACT+TGG	-	chr3.1:60968959-60968978	None:intergenic	35.0%
!	AATTGGTTCCTTCCTCATAA+CGG	+	chr3.1:60968251-60968270	MS.gene52371:CDS	35.0%
!	TCTGAAATTTCTCCCCAAAA+TGG	+	chr3.1:60968085-60968104	MS.gene52371:intron	35.0%
!!	ACCGGCTTTCAATTCTTTTT+GGG	+	chr3.1:60968123-60968142	MS.gene52371:CDS	35.0%
!!	ATTGTAGGTGGTGCTATTAA+TGG	+	chr3.1:60967704-60967723	MS.gene52371:CDS	35.0%
!!	ATTTTGGGTCGTGTTTTTCT+CGG	+	chr3.1:60967752-60967771	MS.gene52371:CDS	35.0%
!!	TCCAGATATTTTAAGGAAGG+CGG	+	chr3.1:60967520-60967539	MS.gene52371:CDS	35.0%
!!!	TACCGGCTTTCAATTCTTTT+TGG	+	chr3.1:60968122-60968141	MS.gene52371:CDS	35.0%
!!!	TGTTTATACTCTGCTGGTTT+TGG	+	chr3.1:60968902-60968921	MS.gene52371:CDS	35.0%
	AAGGTTAGACACAAGGCTAA+CGG	-	chr3.1:60968598-60968617	None:intergenic	40.0%
	AATAGCTATGCTTTGTCCTG+TGG	-	chr3.1:60968990-60969009	None:intergenic	40.0%
	ACCAAATCGGTCAACAAAAC+CGG	-	chr3.1:60968628-60968647	None:intergenic	40.0%
	ACGTCTTCTCTTTATCTAGC+TGG	+	chr3.1:60967599-60967618	MS.gene52371:CDS	40.0%
	AGAATCTTGTTCATAACCGG+GGG	+	chr3.1:60968651-60968670	MS.gene52371:CDS	40.0%
	AGCACCACCTACAATAAAGA+GGG	-	chr3.1:60967699-60967718	None:intergenic	40.0%
	CAGAGATAAGGTTAGACACA+AGG	-	chr3.1:60968605-60968624	None:intergenic	40.0%
	CCAATTGTCATTACAACTGC+AGG	-	chr3.1:60968237-60968256	None:intergenic	40.0%
	CCTAATCTCTTCCATTCTGT+GGG	+	chr3.1:60968528-60968547	MS.gene52371:CDS	40.0%
	CCTGCAGTTGTAATGACAAT+TGG	+	chr3.1:60968234-60968253	MS.gene52371:CDS	40.0%
	CGGTAAGTTGTTGGAAAAGT+GGG	-	chr3.1:60968482-60968501	None:intergenic	40.0%
	CTTGGAATAAGCCATGTTAG+AGG	-	chr3.1:60968941-60968960	None:intergenic	40.0%
	TAGCACCACCTACAATAAAG+AGG	-	chr3.1:60967700-60967719	None:intergenic	40.0%
	TCCTAATCTCTTCCATTCTG+TGG	+	chr3.1:60968527-60968546	MS.gene52371:CDS	40.0%
	TGTTGATACCGGTAAGTTGT+TGG	-	chr3.1:60968491-60968510	None:intergenic	40.0%
!	GGATCCTCTAATTTTGCGTA+AGG	-	chr3.1:60968328-60968347	None:intergenic	40.0%
!!	CCACTTTTCCAACAACTTAC+CGG	+	chr3.1:60968480-60968499	MS.gene52371:CDS	40.0%
!!	TGGTGCTATTAATGGTGGTT+CGG	+	chr3.1:60967712-60967731	MS.gene52371:CDS	40.0%
!!	TTTTGGGTCGTGTTTTTCTC+GGG	+	chr3.1:60967753-60967772	MS.gene52371:CDS	40.0%
!!!	TATACTCTGCTGGTTTTGGT+TGG	+	chr3.1:60968906-60968925	MS.gene52371:CDS	40.0%
	AACACGACCCAAAATGAGCA+TGG	-	chr3.1:60967747-60967766	None:intergenic	45.0%
	AATTTCTCCCCAAAATGGCG+AGG	+	chr3.1:60968090-60968109	MS.gene52371:intron	45.0%
	ACACGACCCAAAATGAGCAT+GGG	-	chr3.1:60967746-60967765	None:intergenic	45.0%
	CAACAAAACCGGCAGAGATA+AGG	-	chr3.1:60968617-60968636	None:intergenic	45.0%
	CCAGATGCTGCCATCAATAT+TGG	+	chr3.1:60967253-60967272	MS.gene52371:CDS	45.0%
	CCCACAGAATGGAAGAGATT+AGG	-	chr3.1:60968531-60968550	None:intergenic	45.0%
	CCGGTAAGTTGTTGGAAAAG+TGG	-	chr3.1:60968483-60968502	None:intergenic	45.0%
	CTCAGGTTCAATATCAACGG+AGG	-	chr3.1:60968349-60968368	None:intergenic	45.0%
	GAAAGCGACGATGTTGATAC+CGG	-	chr3.1:60968502-60968521	None:intergenic	45.0%
	GACAAACATCATAATGCCCC+CGG	-	chr3.1:60968670-60968689	None:intergenic	45.0%
	GATGCTGCCATCAATATTGG+TGG	+	chr3.1:60967256-60967275	MS.gene52371:CDS	45.0%
	GCCGCCTTCCTTAAAATATC+TGG	-	chr3.1:60967524-60967543	None:intergenic	45.0%
	GTGTCTAACCTTATCTCTGC+CGG	+	chr3.1:60968606-60968625	MS.gene52371:CDS	45.0%
!	CCAATATTGATGGCAGCATC+TGG	-	chr3.1:60967256-60967275	None:intergenic	45.0%
!	GCTAACGGATCCAAGTACAA+TGG	-	chr3.1:60968583-60968602	None:intergenic	45.0%
!	GTCGTGTTTTTCTCGGGTTT+GGG	+	chr3.1:60967759-60967778	MS.gene52371:CDS	45.0%
!	TCGTGTTTTTCTCGGGTTTG+GGG	+	chr3.1:60967760-60967779	MS.gene52371:CDS	45.0%
!!	GATATTTTAAGGAAGGCGGC+TGG	+	chr3.1:60967524-60967543	MS.gene52371:CDS	45.0%
!!	GTAGGTGGTGCTATTAATGG+TGG	+	chr3.1:60967707-60967726	MS.gene52371:CDS	45.0%
!!!	TAAAAGCGCCTCGCCATTTT+GGG	-	chr3.1:60968101-60968120	None:intergenic	45.0%
!!!	TAAATAATTAGTTTTTAATT+TGG	+	chr3.1:60967827-60967846	MS.gene52371:intron	5.0%
	ACCACGTTCGACTAAGCTGT+TGG	-	chr3.1:60968283-60968302	None:intergenic	50.0%
	ACGTTCGACTAAGCTGTTGG+GGG	-	chr3.1:60968280-60968299	None:intergenic	50.0%
	AGACACCACTGCTAGCACAA+TGG	-	chr3.1:60968822-60968841	None:intergenic	50.0%
	ATTGTGCTAGCAGTGGTGTC+TGG	+	chr3.1:60968821-60968840	MS.gene52371:CDS	50.0%
	CACGTTCGACTAAGCTGTTG+GGG	-	chr3.1:60968281-60968300	None:intergenic	50.0%
	CCACGTTCGACTAAGCTGTT+GGG	-	chr3.1:60968282-60968301	None:intergenic	50.0%
	CTCTTCCATTCTGTGGGCTT+GGG	+	chr3.1:60968534-60968553	MS.gene52371:CDS	50.0%
	GATACAATGGTGCAGCCTGT+TGG	-	chr3.1:60968063-60968082	None:intergenic	50.0%
	GCAAATGCCATCACCAAGTG+AGG	-	chr3.1:60968456-60968475	None:intergenic	50.0%
	GCTGCAGGCTGCATAAACTA+CGG	+	chr3.1:60968159-60968178	MS.gene52371:CDS	50.0%
	GGTGACTTTGCTAGCTGCAA+GGG	-	chr3.1:60967636-60967655	None:intergenic	50.0%
	GGTGCCCTCTTTATTGTAGG+TGG	+	chr3.1:60967692-60967711	MS.gene52371:CDS	50.0%
	GGTGGTGCCCTCTTTATTGT+AGG	+	chr3.1:60967689-60967708	MS.gene52371:CDS	50.0%
	GTTTCTTCGACCATACCACG+CGG	-	chr3.1:60967657-60967676	None:intergenic	50.0%
	TCTCTTCCATTCTGTGGGCT+TGG	+	chr3.1:60968533-60968552	MS.gene52371:CDS	50.0%
	TGTGTCCATTGTGCTAGCAG+TGG	+	chr3.1:60968814-60968833	MS.gene52371:CDS	50.0%
!	ACATGCATCGTTGCTGCTTC+CGG	+	chr3.1:60967304-60967323	MS.gene52371:CDS	50.0%
!	GCTTCCGGTGGTCTTCTTTT+TGG	+	chr3.1:60967319-60967338	MS.gene52371:CDS	50.0%
!	GGTCGTGTTTTTCTCGGGTT+TGG	+	chr3.1:60967758-60967777	MS.gene52371:CDS	50.0%
!	GTATCGACCTCACTTGGTGA+TGG	+	chr3.1:60968446-60968465	MS.gene52371:CDS	50.0%
!!	AAGGGAGTATCGACCTCACT+TGG	+	chr3.1:60968440-60968459	MS.gene52371:CDS	50.0%
!!	GTTTTTCTCGGGTTTGGGGT+CGG	+	chr3.1:60967764-60967783	MS.gene52371:CDS	50.0%
!!	TTCAGGAGGTGTCACAACGA+TGG	+	chr3.1:60967475-60967494	MS.gene52371:intron	50.0%
!!!	AAAAGCGCCTCGCCATTTTG+GGG	-	chr3.1:60968100-60968119	None:intergenic	50.0%
!!!	CTAAAAGCGCCTCGCCATTT+TGG	-	chr3.1:60968102-60968121	None:intergenic	50.0%
!!!	GCCGGTTTTGTTGACCGATT+TGG	+	chr3.1:60968624-60968643	MS.gene52371:CDS	50.0%
!!!	TGCTGGTTTTGGTTGGTCGT+GGG	+	chr3.1:60968913-60968932	MS.gene52371:CDS	50.0%
	AGCAAAGTCACCGCGTGGTA+TGG	+	chr3.1:60967644-60967663	MS.gene52371:CDS	55.0%
	CATGTCCCAAGCCCACAGAA+TGG	-	chr3.1:60968542-60968561	None:intergenic	55.0%
	CCCAACAGCTTAGTCGAACG+TGG	+	chr3.1:60968279-60968298	MS.gene52371:CDS	55.0%
	CGGTGACTTTGCTAGCTGCA+AGG	-	chr3.1:60967637-60967656	None:intergenic	55.0%
	TCTCCATCCCCATGTGTGCT+TGG	-	chr3.1:60968190-60968209	None:intergenic	55.0%
	TCTGTGGGCTTGGGACATGA+CGG	+	chr3.1:60968543-60968562	MS.gene52371:CDS	55.0%
	TGGGGATGGAGACTCTCTCT+TGG	+	chr3.1:60968198-60968217	MS.gene52371:CDS	55.0%
!	GCAGTGGTGTCTGGTGTTGA+TGG	+	chr3.1:60968830-60968849	MS.gene52371:CDS	55.0%
!!	TGGCGAGGCGCTTTTAGTAC+CGG	+	chr3.1:60968105-60968124	MS.gene52371:intron	55.0%
!!	TGTTGGGGGTGTCCGTTATG+AGG	-	chr3.1:60968266-60968285	None:intergenic	55.0%
!!!	CTGCTGGTTTTGGTTGGTCG+TGG	+	chr3.1:60968912-60968931	MS.gene52371:CDS	55.0%
!!!	GCTGGTTTTGGTTGGTCGTG+GGG	+	chr3.1:60968914-60968933	MS.gene52371:CDS	55.0%
	CAGCTAGCAAAGTCACCGCG+TGG	+	chr3.1:60967639-60967658	MS.gene52371:CDS	60.0%
	CCATCCCCATGTGTGCTTGG+CGG	-	chr3.1:60968187-60968206	None:intergenic	60.0%
!	GGCTGGTGGGGTATTTGCTG+TGG	+	chr3.1:60967222-60967241	MS.gene52371:CDS	60.0%
!	TGCATCGTTGCTGCTTCCGG+TGG	+	chr3.1:60967307-60967326	MS.gene52371:CDS	60.0%
!!	GGAGTTGGTGTAGTCGCTGC+AGG	+	chr3.1:60968144-60968163	MS.gene52371:CDS	60.0%
!!	GGGGGTGTCCGTTATGAGGA+AGG	-	chr3.1:60968262-60968281	None:intergenic	60.0%
	ACGGCACCGCCAAGCACACA+TGG	+	chr3.1:60968178-60968197	MS.gene52371:CDS	65.0%
	CCGCCAAGCACACATGGGGA+TGG	+	chr3.1:60968184-60968203	MS.gene52371:CDS	65.0%
	CGGCACCGCCAAGCACACAT+GGG	+	chr3.1:60968179-60968198	MS.gene52371:CDS	65.0%
	GGCACCGCCAAGCACACATG+GGG	+	chr3.1:60968180-60968199	MS.gene52371:CDS	65.0%
	GGTCGTGGGGCCCTCTAACA+TGG	+	chr3.1:60968927-60968946	MS.gene52371:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	60967220	60969059	60967220	ID=MS.gene52371
chr3.1	mRNA	60967220	60969059	60967220	ID=MS.gene52371.t1;Parent=MS.gene52371
chr3.1	exon	60967220	60967361	60967220	ID=MS.gene52371.t1.exon1;Parent=MS.gene52371.t1
chr3.1	CDS	60967220	60967361	60967220	ID=cds.MS.gene52371.t1;Parent=MS.gene52371.t1
chr3.1	exon	60967480	60967803	60967480	ID=MS.gene52371.t1.exon2;Parent=MS.gene52371.t1
chr3.1	CDS	60967480	60967803	60967480	ID=cds.MS.gene52371.t1;Parent=MS.gene52371.t1
chr3.1	exon	60968112	60968695	60968112	ID=MS.gene52371.t1.exon3;Parent=MS.gene52371.t1
chr3.1	CDS	60968112	60968695	60968112	ID=cds.MS.gene52371.t1;Parent=MS.gene52371.t1
chr3.1	exon	60968809	60969059	60968809	ID=MS.gene52371.t1.exon4;Parent=MS.gene52371.t1
chr3.1	CDS	60968809	60969059	60968809	ID=cds.MS.gene52371.t1;Parent=MS.gene52371.t1

Gene Sequence

>MS.gene52371

ATGGCTGGTGGGGTATTTGCTGTGGATAGTACACCAGATGCTGCCATCAATATTGGTGGCAAGATAACACTCTCAATCATCATTACATGCATCGTTGCTGCTTCCGGTGGTCTTCTTTTTGGATATGACATTGGAATTTCAGGTTCACTTTGTTACAGATGAATTGTGTCACCTTATTATATTTGAATTACATTAGCAATCAAAATTATTGTCGAAATTTATTCTCATGATTTTGATGTTGTGAAAATGTCGAATTTCAGGAGGTGTCACAACGATGGTGCCCTTTCTTCAAAAATTCTTTCCAGATATTTTAAGGAAGGCGGCTGGTGCTGAAGTGAATATGTATTGTGTGTACGATAGTCAAACATTGACATTATTTACGTCTTCTCTTTATCTAGCTGGATTAGTGTCATCCCTTGCAGCTAGCAAAGTCACCGCGTGGTATGGTCGAAGAAACGTCATCATAATAGGTGGTGCCCTCTTTATTGTAGGTGGTGCTATTAATGGTGGTTCGGAAAATATTCCCATGCTCATTTTGGGTCGTGTTTTTCTCGGGTTTGGGGTCGGTTTCACTAATCAAGTAAGTCGCAAAACACTTTTTTTTGGGTAAATAATTAGTTTTTAATTTGGTAATATGCCTAAACAATCATTAATGTTGTATTGAACTTTAAAAACGATAACTAGATAAAAACAATAATTTTATGTAAAAAGGAGTAGAGGAGTCTAGTATCTCCTTATGTTCGTTTTACCTGTACCTCACTATAATTGTCTTGAGATTTTTACCTATTTTTTTTTTAAAAGACTCCTTTTAAATTTTCAACTGCATTAATTATTATTTTACCAACAGGCTGCACCATTGTATCTATCTGAAATTTCTCCCCAAAATGGCGAGGCGCTTTTAGTACCGGCTTTCAATTCTTTTTGGGAGTTGGTGTAGTCGCTGCAGGCTGCATAAACTACGGCACCGCCAAGCACACATGGGGATGGAGACTCTCTCTTGGACTTGCAGTAGTGCCTGCAGTTGTAATGACAATTGGTTCCTTCCTCATAACGGACACCCCCAACAGCTTAGTCGAACGTGGTAAGATAGAGCAAGCCAAAAAAGCCTTACGCAAAATTAGAGGATCCTCCGTTGATATTGAACCTGAGTTAGAAGAACTTATTAAGTCGATAGAAATTGCAAAATCAGTGAAACAAGAGCCCTTTAAGACCATATTAAAAAGGGAGTATCGACCTCACTTGGTGATGGCATTTGCAATCCCACTTTTCCAACAACTTACCGGTATCAACATCGTCGCTTTCTATTCTCCTAATCTCTTCCATTCTGTGGGCTTGGGACATGACGGCGCTTTAATTTCTGCCATTGTACTTGGATCCGTTAGCCTTGTGTCTAACCTTATCTCTGCCGGTTTTGTTGACCGATTTGGTCGAAGAATCTTGTTCATAACCGGGGGCATTATGATGTTTGTCTGCTTGGTAAGTGAATTAACAACCTAACTATCTATTTATTAAATTTATTTTCAGTCATAACAAACTATAATATTCATGTGTCACCTACTAATTAAATTGTTTGTGTGAACAATGTGAAGATTGCTGTGTCCATTGTGCTAGCAGTGGTGTCTGGTGTTGATGGTACAAATGACATATCCAAGGGGAATGCAATATTAGTATTGGTGCTATTATGTTTATACTCTGCTGGTTTTGGTTGGTCGTGGGGCCCTCTAACATGGCTTATTCCAAGTGAGATTTTCCCTGTAAATATAAGAACCACAGGACAAAGCATAGCTATTGCTATACAGTTCATAATAGTATTTGTGCTATCACAAACATTCTTGACAAT

Protein sequence

>MS.gene52371.t1

MAGGVFAVDSTPDAAINIGGKITLSIIITCIVAASGGLLFGYDIGISGGVTTMVPFLQKFFPDILRKAAGAEVNMYCVYDSQTLTLFTSSLYLAGLVSSLAASKVTAWYGRRNVIIIGGALFIVGGAINGGSENIPMLILGRVFLGFGVGFTNQVSAFSTGFQFFLGVGVVAAGCINYGTAKHTWGWRLSLGLAVVPAVVMTIGSFLITDTPNSLVERGKIEQAKKALRKIRGSSVDIEPELEELIKSIEIAKSVKQEPFKTILKREYRPHLVMAFAIPLFQQLTGINIVAFYSPNLFHSVGLGHDGALISAIVLGSVSLVSNLISAGFVDRFGRRILFITGGIMMFVCLIAVSIVLAVVSGVDGTNDISKGNAILVLVLLCLYSAGFGWSWGPLTWLIPSEIFPVNIRTTGQSIAIAIQFIIVFVLSQTFLT