Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59133.t1 | XP_003589619.1 | 94.6 | 316 | 17 | 0 | 1 | 316 | 1 | 316 | 7.40E-171 | 609.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59133.t1 | Q9M2E2 | 39.5 | 299 | 146 | 8 | 42 | 316 | 9 | 296 | 5.7e-47 | 189.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59133.t1 | G7I950 | 94.6 | 316 | 17 | 0 | 1 | 316 | 1 | 316 | 5.3e-171 | 609.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050807 | MS.gene59133 | 0.80926 | 2.07E-50 | -1.69E-46 |
| MS.gene053216 | MS.gene59133 | 0.814977 | 1.17E-51 | -1.69E-46 |
| MS.gene054537 | MS.gene59133 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene59133 | 0.801402 | 9.16E-49 | -1.69E-46 |
| MS.gene056760 | MS.gene59133 | 0.829294 | 5.58E-55 | -1.69E-46 |
| MS.gene057234 | MS.gene59133 | 0.801155 | 1.03E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58267 | MS.gene59133 | PPI |
| MS.gene58347 | MS.gene59133 | PPI |
| MS.gene59133 | MS.gene57564 | PPI |
| MS.gene59133 | MS.gene019537 | PPI |
| MS.gene59133 | MS.gene58344 | PPI |
| MS.gene58271 | MS.gene59133 | PPI |
| MS.gene019532 | MS.gene59133 | PPI |
| MS.gene58346 | MS.gene59133 | PPI |
| MS.gene57558 | MS.gene59133 | PPI |
| MS.gene019531 | MS.gene59133 | PPI |
| MS.gene59133 | MS.gene58343 | PPI |
| MS.gene58270 | MS.gene59133 | PPI |
| MS.gene019530 | MS.gene59133 | PPI |
| MS.gene57560 | MS.gene59133 | PPI |
| MS.gene58268 | MS.gene59133 | PPI |
| MS.gene59133 | MS.gene58348 | PPI |
| MS.gene58272 | MS.gene59133 | PPI |
| MS.gene59133 | MS.gene39579 | PPI |
| MS.gene59133 | MS.gene009163 | PPI |
| MS.gene019527 | MS.gene59133 | PPI |
| MS.gene57562 | MS.gene59133 | PPI |
| MS.gene59133 | MS.gene57563 | PPI |
| MS.gene57559 | MS.gene59133 | PPI |
| MS.gene70985 | MS.gene59133 | PPI |
| MS.gene58269 | MS.gene59133 | PPI |
| MS.gene47525 | MS.gene59133 | PPI |
| MS.gene019536 | MS.gene59133 | PPI |
| MS.gene019535 | MS.gene59133 | PPI |
| MS.gene008719 | MS.gene59133 | PPI |
| MS.gene59133 | MS.gene038616 | PPI |
| MS.gene019540 | MS.gene59133 | PPI |
| MS.gene26577 | MS.gene59133 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59133.t1 | MTR_1g031180 | 94.314 | 299 | 17 | 0 | 18 | 316 | 18 | 316 | 0.0 | 592 |
| MS.gene59133.t1 | MTR_3g098470 | 76.948 | 308 | 71 | 0 | 9 | 316 | 4 | 311 | 0.0 | 510 |
| MS.gene59133.t1 | MTR_8g096060 | 73.667 | 300 | 76 | 1 | 17 | 316 | 14 | 310 | 3.55e-168 | 469 |
| MS.gene59133.t1 | MTR_4g087460 | 42.034 | 295 | 153 | 8 | 34 | 316 | 16 | 304 | 4.05e-71 | 223 |
| MS.gene59133.t1 | MTR_7g076660 | 40.484 | 289 | 147 | 6 | 42 | 316 | 9 | 286 | 4.15e-63 | 201 |
| MS.gene59133.t1 | MTR_7g076660 | 40.484 | 289 | 147 | 6 | 42 | 316 | 10 | 287 | 6.51e-63 | 201 |
| MS.gene59133.t1 | MTR_8g031610 | 40.667 | 300 | 141 | 8 | 42 | 316 | 7 | 294 | 1.01e-62 | 201 |
| MS.gene59133.t1 | MTR_8g031630 | 40.532 | 301 | 141 | 9 | 42 | 316 | 9 | 297 | 1.23e-62 | 201 |
| MS.gene59133.t1 | MTR_7g076655 | 40.484 | 289 | 147 | 6 | 42 | 316 | 9 | 286 | 1.49e-61 | 197 |
| MS.gene59133.t1 | MTR_8g032000 | 38.305 | 295 | 145 | 5 | 42 | 310 | 9 | 292 | 8.57e-61 | 196 |
| MS.gene59133.t1 | MTR_8g031650 | 40.333 | 300 | 141 | 9 | 43 | 316 | 104 | 391 | 8.95e-61 | 199 |
| MS.gene59133.t1 | MTR_8g031650 | 35.537 | 121 | 67 | 4 | 182 | 297 | 2 | 116 | 2.86e-13 | 70.1 |
| MS.gene59133.t1 | MTR_5g062280 | 39.935 | 308 | 141 | 8 | 37 | 316 | 4 | 295 | 1.06e-60 | 196 |
| MS.gene59133.t1 | MTR_8g031960 | 39.333 | 300 | 144 | 6 | 41 | 314 | 9 | 296 | 2.97e-60 | 194 |
| MS.gene59133.t1 | MTR_8g031600 | 40.264 | 303 | 144 | 7 | 40 | 316 | 7 | 298 | 3.36e-60 | 194 |
| MS.gene59133.t1 | MTR_8g032010 | 38.047 | 297 | 147 | 5 | 38 | 308 | 5 | 290 | 4.80e-60 | 194 |
| MS.gene59133.t1 | MTR_8g031980 | 38.284 | 303 | 149 | 6 | 39 | 315 | 6 | 296 | 6.49e-60 | 194 |
| MS.gene59133.t1 | MTR_8g031650 | 40.333 | 300 | 141 | 9 | 43 | 316 | 270 | 557 | 3.04e-59 | 199 |
| MS.gene59133.t1 | MTR_8g031650 | 40.000 | 285 | 131 | 9 | 42 | 297 | 9 | 282 | 2.83e-56 | 191 |
| MS.gene59133.t1 | MTR_8g031910 | 42.123 | 292 | 139 | 8 | 37 | 311 | 4 | 282 | 1.17e-58 | 190 |
| MS.gene59133.t1 | MTR_8g031990 | 36.066 | 305 | 158 | 5 | 38 | 316 | 5 | 298 | 4.45e-58 | 189 |
| MS.gene59133.t1 | MTR_8g031900 | 36.149 | 296 | 157 | 5 | 42 | 316 | 9 | 293 | 4.20e-57 | 186 |
| MS.gene59133.t1 | MTR_8g032020 | 37.086 | 302 | 152 | 6 | 42 | 316 | 10 | 300 | 1.05e-56 | 186 |
| MS.gene59133.t1 | MTR_3g079320 | 37.500 | 296 | 146 | 5 | 42 | 308 | 13 | 298 | 6.28e-56 | 184 |
| MS.gene59133.t1 | MTR_8g031940 | 39.116 | 294 | 141 | 8 | 42 | 308 | 9 | 291 | 9.28e-55 | 180 |
| MS.gene59133.t1 | MTR_7g076665 | 37.248 | 298 | 153 | 6 | 42 | 316 | 9 | 295 | 2.76e-54 | 179 |
| MS.gene59133.t1 | MTR_7g076660 | 38.971 | 272 | 141 | 6 | 59 | 316 | 2 | 262 | 3.58e-54 | 177 |
| MS.gene59133.t1 | MTR_7g106800 | 37.589 | 282 | 127 | 7 | 42 | 316 | 11 | 250 | 9.84e-47 | 159 |
| MS.gene59133.t1 | MTR_8g031850 | 32.734 | 278 | 153 | 4 | 42 | 316 | 9 | 255 | 3.11e-44 | 152 |
| MS.gene59133.t1 | MTR_5g083430 | 38.265 | 196 | 109 | 4 | 121 | 316 | 1 | 184 | 9.18e-35 | 125 |
| MS.gene59133.t1 | MTR_8g032030 | 40.828 | 169 | 72 | 5 | 39 | 180 | 6 | 173 | 1.93e-31 | 118 |
| MS.gene59133.t1 | MTR_3g068070 | 34.722 | 144 | 91 | 3 | 34 | 175 | 12 | 154 | 1.96e-12 | 66.6 |
| MS.gene59133.t1 | MTR_4g105310 | 24.567 | 289 | 170 | 10 | 42 | 313 | 51 | 308 | 1.92e-11 | 64.3 |
| MS.gene59133.t1 | MTR_4g105310 | 25.316 | 237 | 144 | 7 | 42 | 276 | 51 | 256 | 4.69e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59133.t1 | AT5G51030 | 65.806 | 310 | 106 | 0 | 7 | 316 | 5 | 314 | 4.33e-164 | 459 |
| MS.gene59133.t1 | AT5G61830 | 68.690 | 313 | 95 | 2 | 7 | 316 | 4 | 316 | 1.40e-162 | 456 |
| MS.gene59133.t1 | AT5G61830 | 68.690 | 313 | 95 | 2 | 7 | 316 | 4 | 316 | 1.40e-162 | 456 |
| MS.gene59133.t1 | AT3G59710 | 46.290 | 283 | 141 | 5 | 28 | 308 | 7 | 280 | 5.74e-79 | 242 |
| MS.gene59133.t1 | AT3G59710 | 46.429 | 280 | 139 | 5 | 31 | 308 | 39 | 309 | 1.36e-77 | 240 |
| MS.gene59133.t1 | AT3G59710 | 45.745 | 282 | 142 | 5 | 29 | 308 | 18 | 290 | 2.35e-76 | 236 |
| MS.gene59133.t1 | AT3G61220 | 39.465 | 299 | 146 | 8 | 42 | 316 | 9 | 296 | 1.17e-59 | 193 |
| MS.gene59133.t1 | AT3G61220 | 39.465 | 299 | 146 | 8 | 42 | 316 | 16 | 303 | 2.11e-59 | 192 |
| MS.gene59133.t1 | AT3G61220 | 39.465 | 299 | 146 | 8 | 42 | 316 | 40 | 327 | 4.21e-59 | 192 |
| MS.gene59133.t1 | AT2G24190 | 38.255 | 298 | 148 | 8 | 42 | 315 | 9 | 294 | 4.54e-57 | 186 |
| MS.gene59133.t1 | AT2G24190 | 38.255 | 298 | 148 | 8 | 42 | 315 | 14 | 299 | 5.17e-57 | 186 |
| MS.gene59133.t1 | AT1G01800 | 35.880 | 301 | 157 | 7 | 41 | 316 | 6 | 295 | 3.12e-54 | 179 |
| MS.gene59133.t1 | AT1G01800 | 33.880 | 183 | 110 | 3 | 134 | 316 | 89 | 260 | 2.68e-26 | 105 |
| MS.gene59133.t1 | AT5G50130 | 25.566 | 309 | 171 | 13 | 30 | 315 | 27 | 299 | 1.09e-13 | 71.2 |
| MS.gene59133.t1 | AT5G50130 | 30.000 | 220 | 128 | 9 | 30 | 226 | 27 | 243 | 3.37e-13 | 68.9 |
| MS.gene59133.t1 | AT5G50130 | 29.646 | 226 | 122 | 10 | 30 | 226 | 27 | 244 | 3.69e-13 | 68.9 |
| MS.gene59133.t1 | AT5G50130 | 34.416 | 154 | 90 | 7 | 30 | 175 | 27 | 177 | 1.03e-12 | 68.2 |
| MS.gene59133.t1 | AT5G50130 | 34.416 | 154 | 90 | 7 | 30 | 175 | 27 | 177 | 1.08e-12 | 68.2 |
| MS.gene59133.t1 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 16 | 159 | 4.47e-12 | 65.9 |
| MS.gene59133.t1 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 20 | 163 | 5.14e-12 | 65.9 |
| MS.gene59133.t1 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 23 | 166 | 5.43e-12 | 65.9 |
| MS.gene59133.t1 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 18 | 161 | 5.45e-12 | 65.5 |
| MS.gene59133.t1 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 15 | 158 | 6.99e-12 | 65.1 |
| MS.gene59133.t1 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 16 | 159 | 7.05e-12 | 65.1 |
| MS.gene59133.t1 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 20 | 163 | 7.37e-12 | 65.1 |
| MS.gene59133.t1 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 14 | 157 | 7.68e-12 | 65.1 |
| MS.gene59133.t1 | AT5G50130 | 26.102 | 295 | 159 | 13 | 44 | 315 | 8 | 266 | 8.26e-12 | 65.5 |
| MS.gene59133.t1 | AT3G46170 | 31.293 | 147 | 95 | 3 | 38 | 178 | 27 | 173 | 1.95e-11 | 63.9 |
| MS.gene59133.t1 | AT3G55290 | 31.293 | 147 | 95 | 3 | 38 | 178 | 19 | 165 | 4.07e-11 | 63.2 |
| MS.gene59133.t1 | AT3G55290 | 31.293 | 147 | 95 | 3 | 38 | 178 | 18 | 164 | 4.15e-11 | 63.2 |
| MS.gene59133.t1 | AT3G55310 | 31.293 | 147 | 95 | 3 | 38 | 178 | 18 | 164 | 6.10e-11 | 62.4 |
| MS.gene59133.t1 | AT4G24050 | 29.388 | 245 | 128 | 11 | 42 | 277 | 37 | 245 | 8.11e-11 | 62.0 |
Find 74 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACGGATGGTTTCATTAA+TGG | 0.171749 | 1.4:-15766795 | None:intergenic |
| TTATGGTGGTTTAGATATTC+TGG | 0.207457 | 1.4:+15765940 | MS.gene59133:CDS |
| ATGCTGGTGCTGAATCAATT+AGG | 0.236783 | 1.4:+15765822 | MS.gene59133:CDS |
| TTGAAGAGATTAACCTTCTA+AGG | 0.249355 | 1.4:+15765387 | MS.gene59133:CDS |
| TCTGCATGACCAAACAATTA+TGG | 0.255042 | 1.4:+15767829 | MS.gene59133:CDS |
| GTTATCGAAACAAATTATTA+TGG | 0.280899 | 1.4:+15766744 | MS.gene59133:CDS |
| ATAAGCATTAACAGCAAGTT+TGG | 0.293083 | 1.4:-15767651 | None:intergenic |
| TACCTTTGGTGATCGGAATA+AGG | 0.301057 | 1.4:-15765416 | None:intergenic |
| ACCGGTGGAAATAGAGGAAT+TGG | 0.315043 | 1.4:+15765734 | MS.gene59133:CDS |
| TAATGCTTATACAAGGCTTA+TGG | 0.345742 | 1.4:+15767664 | MS.gene59133:CDS |
| GAAACTATTGCTGTCGTTAC+CGG | 0.347929 | 1.4:+15765716 | MS.gene59133:CDS |
| CAGTGGTTGCAGGAAAATTA+TGG | 0.362541 | 1.4:+15765923 | MS.gene59133:CDS |
| AATAAGGAATAGACCTTAGA+AGG | 0.365707 | 1.4:-15765400 | None:intergenic |
| TGCTGGTGCTGAATCAATTA+GGG | 0.366104 | 1.4:+15765823 | MS.gene59133:CDS |
| GAGTAATATCGAGTTTCTTT+CGG | 0.367468 | 1.4:+15767526 | MS.gene59133:CDS |
| GAATTGGGTTTGAGATTTGT+AGG | 0.377648 | 1.4:+15765750 | MS.gene59133:CDS |
| GTTGAGGAAGGAGCTGATAC+TGG | 0.389307 | 1.4:+15767791 | MS.gene59133:CDS |
| CTGCATGACCAAACAATTAT+GGG | 0.389652 | 1.4:+15767830 | MS.gene59133:CDS |
| CCACTTTGTTCAGTGGTTGC+AGG | 0.392622 | 1.4:+15765913 | MS.gene59133:CDS |
| GAAGATGGAAGCTGGACATC+AGG | 0.400850 | 1.4:+15767593 | MS.gene59133:CDS |
| TGGGTGAAGACGGCTTTAAC+AGG | 0.403091 | 1.4:+15767749 | MS.gene59133:CDS |
| AAGGAGCTGATACTGGAGTA+TGG | 0.430228 | 1.4:+15767798 | MS.gene59133:CDS |
| TTAATGAAACCATCCGTTGT+TGG | 0.467745 | 1.4:+15766798 | MS.gene59133:CDS |
| CCACTGAACAAAGTGGTTGA+TGG | 0.467844 | 1.4:-15765906 | None:intergenic |
| GCTGGTGTTAATTTCAATCT+CGG | 0.468354 | 1.4:+15766690 | MS.gene59133:CDS |
| GCAGGAAGGTGGTTTGGATG+TGG | 0.470123 | 1.4:+15765850 | MS.gene59133:CDS |
| AATGGGTAAGGCGGAGAAGA+AGG | 0.474975 | 1.4:+15765334 | None:intergenic |
| TCACGTCTAGGTCGACTAAA+CGG | 0.479378 | 1.4:+15766843 | MS.gene59133:CDS |
| TTTCGGAGGAACTGATTGAC+AGG | 0.480683 | 1.4:+15767543 | MS.gene59133:CDS |
| TGTAGGCAACTTGCTACTCA+TGG | 0.483655 | 1.4:+15765767 | MS.gene59133:CDS |
| TTAACTGCTATTGCCCGGGT+TGG | 0.500994 | 1.4:+15767729 | MS.gene59133:CDS |
| TAACTGCTATTGCCCGGGTT+GGG | 0.501130 | 1.4:+15767730 | MS.gene59133:CDS |
| CTCTGTTGAAAATGCGCGCA+AGG | 0.504384 | 1.4:+15766722 | MS.gene59133:CDS |
| AATCACCAATGTAGCCTTGA+GGG | 0.505474 | 1.4:+15767496 | MS.gene59133:CDS |
| AAGATGGAAGCTGGACATCA+GGG | 0.508335 | 1.4:+15767594 | MS.gene59133:CDS |
| AGATTGATACCTTTGGTGAT+CGG | 0.520596 | 1.4:-15765423 | None:intergenic |
| TAATTGTTTGGTCATGCAGA+AGG | 0.520763 | 1.4:-15767826 | None:intergenic |
| CCGGTGGAAATAGAGGAATT+GGG | 0.523137 | 1.4:+15765735 | MS.gene59133:CDS |
| AACAAGTAGAAGATGGAAGC+TGG | 0.524013 | 1.4:+15767585 | MS.gene59133:CDS |
| GAGTAATCAGTATATATTTG+AGG | 0.527703 | 1.4:-15767623 | None:intergenic |
| CCATCAACCACTTTGTTCAG+TGG | 0.531554 | 1.4:+15765906 | MS.gene59133:CDS |
| TAATGGTAGGTAAACAATGC+TGG | 0.537419 | 1.4:+15766672 | MS.gene59133:intron |
| TTTGTTAACTGCTATTGCCC+GGG | 0.539327 | 1.4:+15767725 | MS.gene59133:CDS |
| TTGCTGTTAATGCTTATACA+AGG | 0.539788 | 1.4:+15767657 | MS.gene59133:CDS |
| CCCAATTCCTCTATTTCCAC+CGG | 0.540422 | 1.4:-15765735 | None:intergenic |
| TTGCCCGGGTTGGGTGAAGA+CGG | 0.541413 | 1.4:+15767739 | MS.gene59133:CDS |
| TTCCTTATTCCGATCACCAA+AGG | 0.551276 | 1.4:+15765414 | MS.gene59133:CDS |
| TTGCTCCCTCAAGGCTACAT+TGG | 0.555869 | 1.4:-15767501 | None:intergenic |
| TCACTGCATATAAATGGGTA+AGG | 0.561657 | 1.4:+15765322 | None:intergenic |
| GTCGTTACCGGTGGAAATAG+AGG | 0.562574 | 1.4:+15765728 | MS.gene59133:CDS |
| CTTCTGGCCTTCTGGTCGCT+CGG | 0.566219 | 1.4:-15767699 | None:intergenic |
| CCTGCAACCACTGAACAAAG+TGG | 0.566437 | 1.4:-15765913 | None:intergenic |
| GATGGAAGCTGGACATCAGG+GGG | 0.568512 | 1.4:+15767596 | MS.gene59133:CDS |
| AAAGCCGTCTTCACCCAACC+CGG | 0.568919 | 1.4:-15767743 | None:intergenic |
| ACATCAAGAGATGCTAATGC+TGG | 0.581456 | 1.4:+15765806 | MS.gene59133:CDS |
| AAGCTTTCCGAGCGACCAGA+AGG | 0.585315 | 1.4:+15767692 | MS.gene59133:CDS |
| TGCAGGGAACAATACTGTTG+AGG | 0.586655 | 1.4:+15767775 | MS.gene59133:CDS |
| TAATATCGAGTTTCTTTCGG+AGG | 0.586814 | 1.4:+15767529 | MS.gene59133:CDS |
| AATTGTTTGGTCATGCAGAA+GGG | 0.587655 | 1.4:-15767825 | None:intergenic |
| GTAAATGTAAGCTCACGTCT+AGG | 0.591413 | 1.4:+15766831 | MS.gene59133:CDS |
| ATTACTCAGTTGCTCCCTCA+AGG | 0.595356 | 1.4:-15767510 | None:intergenic |
| ATTCGAGCACCAACAACGGA+TGG | 0.604995 | 1.4:-15766807 | None:intergenic |
| GGGAACAATACTGTTGAGGA+AGG | 0.613804 | 1.4:+15767779 | MS.gene59133:CDS |
| TACAATTCGAGCACCAACAA+CGG | 0.619020 | 1.4:-15766811 | None:intergenic |
| AGATGGAAGCTGGACATCAG+GGG | 0.625603 | 1.4:+15767595 | MS.gene59133:CDS |
| TAAGGCGGAGAAGAAGGAGA+AGG | 0.634663 | 1.4:+15765340 | MS.gene59133:CDS |
| AAGCCGTCTTCACCCAACCC+GGG | 0.642912 | 1.4:-15767742 | None:intergenic |
| GAATCACCAATGTAGCCTTG+AGG | 0.646638 | 1.4:+15767495 | MS.gene59133:CDS |
| ACTATTGCTGTCGTTACCGG+TGG | 0.647178 | 1.4:+15765719 | MS.gene59133:CDS |
| TGGTTGCAGGAAAATTATGG+TGG | 0.649893 | 1.4:+15765926 | MS.gene59133:CDS |
| CTTATACAAGGCTTATGGCG+AGG | 0.650044 | 1.4:+15767669 | MS.gene59133:CDS |
| TAGGTCGACTAAACGGAAGA+CGG | 0.659235 | 1.4:+15766850 | MS.gene59133:CDS |
| CTGCATATAAATGGGTAAGG+CGG | 0.662103 | 1.4:+15765325 | None:intergenic |
| ATGGAAGCTGGACATCAGGG+GGG | 0.712462 | 1.4:+15767597 | MS.gene59133:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTAGAATAATTGATTT+TGG | - | chr1.4:15765589-15765608 | None:intergenic | 15.0% |
| !! | AAAAACTATTAGGAAAGATT+TGG | + | chr1.4:15766420-15766439 | MS.gene59133:intron | 20.0% |
| !! | ATCAAAATGGATAAAAATCT+TGG | - | chr1.4:15766016-15766035 | None:intergenic | 20.0% |
| !! | CTTCTAACTATTATCTTTAA+TGG | + | chr1.4:15766655-15766674 | MS.gene59133:intron | 20.0% |
| !! | GTTATCGAAACAAATTATTA+TGG | + | chr1.4:15766744-15766763 | MS.gene59133:CDS | 20.0% |
| !! | TAACTATTATCTTTAATGGT+AGG | + | chr1.4:15766659-15766678 | MS.gene59133:intron | 20.0% |
| !!! | AAATGTAGAGTTGATATTAA+TGG | + | chr1.4:15767455-15767474 | MS.gene59133:intron | 20.0% |
| !!! | AATGTAGAGTTGATATTAAT+GGG | + | chr1.4:15767456-15767475 | MS.gene59133:intron | 20.0% |
| !!! | AGTAACAAAAATTTTAACGT+TGG | - | chr1.4:15767269-15767288 | None:intergenic | 20.0% |
| !!! | ATTTCACTTTTAAGTGTTTA+TGG | + | chr1.4:15765453-15765472 | MS.gene59133:intron | 20.0% |
| !!! | GATTACAATTTTTGCAAAAA+TGG | - | chr1.4:15766890-15766909 | None:intergenic | 20.0% |
| !!! | TTATCCATTTTGATTACTTT+TGG | + | chr1.4:15766022-15766041 | MS.gene59133:intron | 20.0% |
| !!! | TTATGTCAGATAGAAATTTT+AGG | - | chr1.4:15767177-15767196 | None:intergenic | 20.0% |
| ! | AAAAACTTCCCATAATTGTT+TGG | - | chr1.4:15767841-15767860 | None:intergenic | 25.0% |
| ! | AGTCTGAATTACATATATTG+TGG | + | chr1.4:15767236-15767255 | MS.gene59133:intron | 25.0% |
| ! | CAATCCAAAAGTAATCAAAA+TGG | - | chr1.4:15766029-15766048 | None:intergenic | 25.0% |
| ! | GAGTAATCAGTATATATTTG+AGG | - | chr1.4:15767626-15767645 | None:intergenic | 25.0% |
| ! | TCTTTCACATTTGATCTAAA+TGG | + | chr1.4:15766113-15766132 | MS.gene59133:intron | 25.0% |
| ! | TGAGAATAAAATAAGCATAG+TGG | + | chr1.4:15766174-15766193 | MS.gene59133:intron | 25.0% |
| !! | TCTTTCCTAATAGTTTTTCT+AGG | - | chr1.4:15766418-15766437 | None:intergenic | 25.0% |
| !! | TTTTTACAACAAGTAGAAGA+TGG | + | chr1.4:15767578-15767597 | MS.gene59133:CDS | 25.0% |
| !!! | AGATGCATTTTTTTACTTTG+AGG | - | chr1.4:15766954-15766973 | None:intergenic | 25.0% |
| !!! | ATTTTAGGTGATAAGGTAAT+AGG | - | chr1.4:15767162-15767181 | None:intergenic | 25.0% |
| !!! | GATAGAAATTTTAGGTGATA+AGG | - | chr1.4:15767169-15767188 | None:intergenic | 25.0% |
| !!! | TGCTTATTTTATTCTCATGT+TGG | - | chr1.4:15766171-15766190 | None:intergenic | 25.0% |
| AAATCTGAGCAAAACTATGA+AGG | - | chr1.4:15766921-15766940 | None:intergenic | 30.0% | |
| AATAAGGAATAGACCTTAGA+AGG | - | chr1.4:15765403-15765422 | None:intergenic | 30.0% | |
| AGCAGTTAACAAAAATCTTC+TGG | - | chr1.4:15767718-15767737 | None:intergenic | 30.0% | |
| ATAAGCATTAACAGCAAGTT+TGG | - | chr1.4:15767654-15767673 | None:intergenic | 30.0% | |
| ATAGTTTACCACAAAGTAGA+TGG | - | chr1.4:15767384-15767403 | None:intergenic | 30.0% | |
| ATGACTATATTAGAGAGAGT+TGG | + | chr1.4:15766251-15766270 | MS.gene59133:intron | 30.0% | |
| CGAAAAATTAGAAAAAGCTC+CGG | - | chr1.4:15765663-15765682 | None:intergenic | 30.0% | |
| GAAATTCCATAAACCATACA+AGG | - | chr1.4:15765627-15765646 | None:intergenic | 30.0% | |
| GAAGACCTAGAAAAACTATT+AGG | + | chr1.4:15766410-15766429 | MS.gene59133:intron | 30.0% | |
| GAGTAATATCGAGTTTCTTT+CGG | + | chr1.4:15767526-15767545 | MS.gene59133:CDS | 30.0% | |
| GCAAAATAGATTGATACCTT+TGG | - | chr1.4:15765433-15765452 | None:intergenic | 30.0% | |
| GTGATAAGGTAATAGGATAA+GGG | - | chr1.4:15767155-15767174 | None:intergenic | 30.0% | |
| TAATGCTTATACAAGGCTTA+TGG | + | chr1.4:15767664-15767683 | MS.gene59133:CDS | 30.0% | |
| TGACTATATTAGAGAGAGTT+GGG | + | chr1.4:15766252-15766271 | MS.gene59133:intron | 30.0% | |
| TGATCTTAACATTGTGAACA+TGG | + | chr1.4:15766552-15766571 | MS.gene59133:intron | 30.0% | |
| TTATGGTGGTTTAGATATTC+TGG | + | chr1.4:15765940-15765959 | MS.gene59133:CDS | 30.0% | |
| TTGAAGAGATTAACCTTCTA+AGG | + | chr1.4:15765387-15765406 | MS.gene59133:CDS | 30.0% | |
| ! | ACTATGAAGTATGTTGATTG+TGG | + | chr1.4:15766608-15766627 | MS.gene59133:intron | 30.0% |
| ! | CAATTTTGAATACATGTAGG+TGG | + | chr1.4:15765684-15765703 | MS.gene59133:intron | 30.0% |
| ! | CGTCAATTTTGAATACATGT+AGG | + | chr1.4:15765681-15765700 | MS.gene59133:intron | 30.0% |
| ! | TTGCTGTTAATGCTTATACA+AGG | + | chr1.4:15767657-15767676 | MS.gene59133:CDS | 30.0% |
| AAGGAATTGCAGCATTTGAA+AGG | - | chr1.4:15767319-15767338 | None:intergenic | 35.0% | |
| AATTGTTTGGTCATGCAGAA+GGG | - | chr1.4:15767828-15767847 | None:intergenic | 35.0% | |
| AATTTCAAACCACTCTTGTC+CGG | + | chr1.4:15765641-15765660 | MS.gene59133:intron | 35.0% | |
| ACAACGGATGGTTTCATTAA+TGG | - | chr1.4:15766798-15766817 | None:intergenic | 35.0% | |
| ACCTATAGTAGAAAAGATGG+TGG | + | chr1.4:15766280-15766299 | MS.gene59133:intron | 35.0% | |
| ACTTTGTCCCCTATGAAATA+GGG | + | chr1.4:15767061-15767080 | MS.gene59133:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGA+TGG | + | chr1.4:15766277-15766296 | MS.gene59133:intron | 35.0% | |
| AGTCATGGTAAAACACCTTT+AGG | - | chr1.4:15767044-15767063 | None:intergenic | 35.0% | |
| ATAAGGTAATAGGATAAGGG+CGG | - | chr1.4:15767152-15767171 | None:intergenic | 35.0% | |
| ATGGTGTATGGTAGAACATA+TGG | + | chr1.4:15766466-15766485 | MS.gene59133:intron | 35.0% | |
| CACCTATAGATTCTGTAGTA+AGG | + | chr1.4:15766338-15766357 | MS.gene59133:intron | 35.0% | |
| CATCACTAGAGTATGCTAAA+AGG | - | chr1.4:15767338-15767357 | None:intergenic | 35.0% | |
| CTCCTTACTACAGAATCTAT+AGG | - | chr1.4:15766343-15766362 | None:intergenic | 35.0% | |
| CTGCATGACCAAACAATTAT+GGG | + | chr1.4:15767830-15767849 | MS.gene59133:CDS | 35.0% | |
| GAAGTTCCTTGTATGGTTTA+TGG | + | chr1.4:15765618-15765637 | MS.gene59133:intron | 35.0% | |
| GACTATATTAGAGAGAGTTG+GGG | + | chr1.4:15766253-15766272 | MS.gene59133:intron | 35.0% | |
| GGTGATAAGGTAATAGGATA+AGG | - | chr1.4:15767156-15767175 | None:intergenic | 35.0% | |
| GTGAACATGGAATTAAACAC+AGG | + | chr1.4:15766565-15766584 | MS.gene59133:intron | 35.0% | |
| TAATATCGAGTTTCTTTCGG+AGG | + | chr1.4:15767529-15767548 | MS.gene59133:CDS | 35.0% | |
| TAATGGTAGGTAAACAATGC+TGG | + | chr1.4:15766672-15766691 | MS.gene59133:intron | 35.0% | |
| TAATTGTTTGGTCATGCAGA+AGG | - | chr1.4:15767829-15767848 | None:intergenic | 35.0% | |
| TAGCAAGTGTTCACTATACT+GGG | - | chr1.4:15765549-15765568 | None:intergenic | 35.0% | |
| TAGTGAGTTGTACCAAAACA+TGG | + | chr1.4:15766447-15766466 | MS.gene59133:intron | 35.0% | |
| TCTGCATGACCAAACAATTA+TGG | + | chr1.4:15767829-15767848 | MS.gene59133:CDS | 35.0% | |
| TTAATGAAACCATCCGTTGT+TGG | + | chr1.4:15766798-15766817 | MS.gene59133:CDS | 35.0% | |
| TTAGCAAGTGTTCACTATAC+TGG | - | chr1.4:15765550-15765569 | None:intergenic | 35.0% | |
| TTGTACCAAAACATGGTGTA+TGG | + | chr1.4:15766454-15766473 | MS.gene59133:intron | 35.0% | |
| ! | AAATAAGCATAGTGGAGATG+AGG | + | chr1.4:15766182-15766201 | MS.gene59133:intron | 35.0% |
| ! | AGATTGATACCTTTGGTGAT+CGG | - | chr1.4:15765426-15765445 | None:intergenic | 35.0% |
| ! | CATCTCACTGTCATCTTTTT+GGG | + | chr1.4:15766969-15766988 | MS.gene59133:intron | 35.0% |
| ! | GAATTGGGTTTGAGATTTGT+AGG | + | chr1.4:15765750-15765769 | MS.gene59133:CDS | 35.0% |
| ! | GCTGGTGTTAATTTCAATCT+CGG | + | chr1.4:15766690-15766709 | MS.gene59133:CDS | 35.0% |
| ! | TCCACCATCTTTTCTACTAT+AGG | - | chr1.4:15766284-15766303 | None:intergenic | 35.0% |
| ! | TGAATCAATTAGGGTTTTGC+AGG | + | chr1.4:15765832-15765851 | MS.gene59133:CDS | 35.0% |
| ! | TTCTACCATACACCATGTTT+TGG | - | chr1.4:15766462-15766481 | None:intergenic | 35.0% |
| ! | TTTGATTGCGCTTCATTTTG+TGG | + | chr1.4:15767417-15767436 | MS.gene59133:intron | 35.0% |
| ! | TTTTGAATACATGTAGGTGG+TGG | + | chr1.4:15765687-15765706 | MS.gene59133:intron | 35.0% |
| ! | TTTTGTTAACTGCTATTGCC+CGG | + | chr1.4:15767724-15767743 | MS.gene59133:CDS | 35.0% |
| !! | TTCTGAAATATACCGCCTAA+AGG | + | chr1.4:15767026-15767045 | MS.gene59133:intron | 35.0% |
| !! | TTGTTCTGAAGTTCCTTGTA+TGG | + | chr1.4:15765611-15765630 | MS.gene59133:intron | 35.0% |
| !!! | AAGTTTTTTTGCTGAGAGAC+GGG | + | chr1.4:15767853-15767872 | MS.gene59133:CDS | 35.0% |
| !!! | GAAGTTTTTTTGCTGAGAGA+CGG | + | chr1.4:15767852-15767871 | MS.gene59133:CDS | 35.0% |
| AACAAGTAGAAGATGGAAGC+TGG | + | chr1.4:15767585-15767604 | MS.gene59133:CDS | 40.0% | |
| ACATCAAGAGATGCTAATGC+TGG | + | chr1.4:15765806-15765825 | MS.gene59133:CDS | 40.0% | |
| AGCAAGTGTTCACTATACTG+GGG | - | chr1.4:15765548-15765567 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr1.4:15766354-15766373 | MS.gene59133:intron | 40.0% | |
| ATCTAAATGGAACAGAGTGC+TGG | + | chr1.4:15766126-15766145 | MS.gene59133:intron | 40.0% | |
| CAGTGGTTGCAGGAAAATTA+TGG | + | chr1.4:15765923-15765942 | MS.gene59133:CDS | 40.0% | |
| CATGGTAAAACACCTTTAGG+CGG | - | chr1.4:15767041-15767060 | None:intergenic | 40.0% | |
| CTACAGACCCCTATTTCATA+GGG | - | chr1.4:15767072-15767091 | None:intergenic | 40.0% | |
| CTTTGTCCCCTATGAAATAG+GGG | + | chr1.4:15767062-15767081 | MS.gene59133:intron | 40.0% | |
| GAAACTATTGCTGTCGTTAC+CGG | + | chr1.4:15765716-15765735 | MS.gene59133:CDS | 40.0% | |
| GACTTTGTCCCCTATGAAAT+AGG | + | chr1.4:15767060-15767079 | MS.gene59133:intron | 40.0% | |
| GGTCTGTAGCTGATGTTTAT+CGG | + | chr1.4:15767083-15767102 | MS.gene59133:intron | 40.0% | |
| GTAAATGTAAGCTCACGTCT+AGG | + | chr1.4:15766831-15766850 | MS.gene59133:CDS | 40.0% | |
| GTGGTAAGACTAGATGAGAT+AGG | + | chr1.4:15766221-15766240 | MS.gene59133:intron | 40.0% | |
| TAAGGTAATAGGATAAGGGC+GGG | - | chr1.4:15767151-15767170 | None:intergenic | 40.0% | |
| TACAATTCGAGCACCAACAA+CGG | - | chr1.4:15766814-15766833 | None:intergenic | 40.0% | |
| TACAGACCCCTATTTCATAG+GGG | - | chr1.4:15767071-15767090 | None:intergenic | 40.0% | |
| TCACTAGACCATCTACTTTG+TGG | + | chr1.4:15767373-15767392 | MS.gene59133:intron | 40.0% | |
| TGGATAGATTACAACAGCAC+AGG | - | chr1.4:15765996-15766015 | None:intergenic | 40.0% | |
| TGGTTGCAGGAAAATTATGG+TGG | + | chr1.4:15765926-15765945 | MS.gene59133:CDS | 40.0% | |
| TTCCTTATTCCGATCACCAA+AGG | + | chr1.4:15765414-15765433 | MS.gene59133:CDS | 40.0% | |
| TTTCATAGGGGACAAAGTCA+TGG | - | chr1.4:15767059-15767078 | None:intergenic | 40.0% | |
| TTTGTTAACTGCTATTGCCC+GGG | + | chr1.4:15767725-15767744 | MS.gene59133:CDS | 40.0% | |
| ! | AAGCCTTTTCTCACTAAGTG+GGG | - | chr1.4:15766515-15766534 | None:intergenic | 40.0% |
| ! | AATCACCAATGTAGCCTTGA+GGG | + | chr1.4:15767496-15767515 | MS.gene59133:CDS | 40.0% |
| ! | ACAAAAATCTTCTGGCCTTC+TGG | - | chr1.4:15767710-15767729 | None:intergenic | 40.0% |
| ! | ATGCTGGTGCTGAATCAATT+AGG | + | chr1.4:15765822-15765841 | MS.gene59133:CDS | 40.0% |
| ! | CAAGCCTTTTCTCACTAAGT+GGG | - | chr1.4:15766516-15766535 | None:intergenic | 40.0% |
| ! | GCATCTCACTGTCATCTTTT+TGG | + | chr1.4:15766968-15766987 | MS.gene59133:intron | 40.0% |
| ! | TACCTTTGGTGATCGGAATA+AGG | - | chr1.4:15765419-15765438 | None:intergenic | 40.0% |
| ! | TCAATTAGGGTTTTGCAGGA+AGG | + | chr1.4:15765836-15765855 | MS.gene59133:CDS | 40.0% |
| ! | TGCTGGTGCTGAATCAATTA+GGG | + | chr1.4:15765823-15765842 | MS.gene59133:CDS | 40.0% |
| AAGATGGAAGCTGGACATCA+GGG | + | chr1.4:15767594-15767613 | MS.gene59133:CDS | 45.0% | |
| AAGGAGCTGATACTGGAGTA+TGG | + | chr1.4:15767798-15767817 | MS.gene59133:CDS | 45.0% | |
| AAGGTAATAGGATAAGGGCG+GGG | - | chr1.4:15767150-15767169 | None:intergenic | 45.0% | |
| ACCGGTGGAAATAGAGGAAT+TGG | + | chr1.4:15765734-15765753 | MS.gene59133:CDS | 45.0% | |
| ATTACTCAGTTGCTCCCTCA+AGG | - | chr1.4:15767513-15767532 | None:intergenic | 45.0% | |
| CCACTGAACAAAGTGGTTGA+TGG | - | chr1.4:15765909-15765928 | None:intergenic | 45.0% | |
| CCACTTAGTGAGAAAAGGCT+TGG | + | chr1.4:15766514-15766533 | MS.gene59133:intron | 45.0% | |
| CCATCAACCACTTTGTTCAG+TGG | + | chr1.4:15765906-15765925 | MS.gene59133:CDS | 45.0% | |
| CCCAATTCCTCTATTTCCAC+CGG | - | chr1.4:15765738-15765757 | None:intergenic | 45.0% | |
| CCGGTGGAAATAGAGGAATT+GGG | + | chr1.4:15765735-15765754 | MS.gene59133:CDS | 45.0% | |
| CTTATACAAGGCTTATGGCG+AGG | + | chr1.4:15767669-15767688 | MS.gene59133:CDS | 45.0% | |
| GATTACAACAGCACAGGCTA+TGG | - | chr1.4:15765990-15766009 | None:intergenic | 45.0% | |
| GCTACAGACCCCTATTTCAT+AGG | - | chr1.4:15767073-15767092 | None:intergenic | 45.0% | |
| GGGAACAATACTGTTGAGGA+AGG | + | chr1.4:15767779-15767798 | MS.gene59133:CDS | 45.0% | |
| TAGGTCGACTAAACGGAAGA+CGG | + | chr1.4:15766850-15766869 | MS.gene59133:CDS | 45.0% | |
| TCACGTCTAGGTCGACTAAA+CGG | + | chr1.4:15766843-15766862 | MS.gene59133:CDS | 45.0% | |
| TGACCCCACTTAGTGAGAAA+AGG | + | chr1.4:15766509-15766528 | MS.gene59133:intron | 45.0% | |
| TGCAGGGAACAATACTGTTG+AGG | + | chr1.4:15767775-15767794 | MS.gene59133:CDS | 45.0% | |
| TTTCGGAGGAACTGATTGAC+AGG | + | chr1.4:15767543-15767562 | MS.gene59133:CDS | 45.0% | |
| ! | AGTTGATGCAGTGAAGCAGA+TGG | + | chr1.4:15767200-15767219 | MS.gene59133:intron | 45.0% |
| ! | ATTAGGGTTTTGCAGGAAGG+TGG | + | chr1.4:15765839-15765858 | MS.gene59133:CDS | 45.0% |
| ! | CCAAGCCTTTTCTCACTAAG+TGG | - | chr1.4:15766517-15766536 | None:intergenic | 45.0% |
| ! | GAATCACCAATGTAGCCTTG+AGG | + | chr1.4:15767495-15767514 | MS.gene59133:CDS | 45.0% |
| ! | TGTATTTGCCCCTCTAGAAG+AGG | - | chr1.4:15767120-15767139 | None:intergenic | 45.0% |
| !! | ACGGCTTTAACAGGTTTTGC+AGG | + | chr1.4:15767758-15767777 | MS.gene59133:CDS | 45.0% |
| !! | CGGCTTTAACAGGTTTTGCA+GGG | + | chr1.4:15767759-15767778 | MS.gene59133:CDS | 45.0% |
| !! | TGTAGGCAACTTGCTACTCA+TGG | + | chr1.4:15765767-15765786 | MS.gene59133:CDS | 45.0% |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr1.4:15766503-15766522 | None:intergenic | 50.0% | |
| ACTATTGCTGTCGTTACCGG+TGG | + | chr1.4:15765719-15765738 | MS.gene59133:CDS | 50.0% | |
| AGATGGAAGCTGGACATCAG+GGG | + | chr1.4:15767595-15767614 | MS.gene59133:CDS | 50.0% | |
| AGGATGTTGCGTTGGATGTG+TGG | + | chr1.4:15766202-15766221 | MS.gene59133:intron | 50.0% | |
| ATTCGAGCACCAACAACGGA+TGG | - | chr1.4:15766810-15766829 | None:intergenic | 50.0% | |
| CCACTTTGTTCAGTGGTTGC+AGG | + | chr1.4:15765913-15765932 | MS.gene59133:CDS | 50.0% | |
| CCTGCAACCACTGAACAAAG+TGG | - | chr1.4:15765916-15765935 | None:intergenic | 50.0% | |
| CTCTGTTGAAAATGCGCGCA+AGG | + | chr1.4:15766722-15766741 | MS.gene59133:CDS | 50.0% | |
| GAAAAAGCTCCGGACAAGAG+TGG | - | chr1.4:15765653-15765672 | None:intergenic | 50.0% | |
| GAAGATGGAAGCTGGACATC+AGG | + | chr1.4:15767593-15767612 | MS.gene59133:CDS | 50.0% | |
| GTCGTTACCGGTGGAAATAG+AGG | + | chr1.4:15765728-15765747 | MS.gene59133:CDS | 50.0% | |
| GTTGAGGAAGGAGCTGATAC+TGG | + | chr1.4:15767791-15767810 | MS.gene59133:CDS | 50.0% | |
| TAACTGCTATTGCCCGGGTT+GGG | + | chr1.4:15767730-15767749 | MS.gene59133:CDS | 50.0% | |
| TAAGGCGGAGAAGAAGGAGA+AGG | + | chr1.4:15765340-15765359 | MS.gene59133:CDS | 50.0% | |
| TAGCCGCTTCCTCTTCTAGA+GGG | + | chr1.4:15767108-15767127 | MS.gene59133:intron | 50.0% | |
| TGGAGATGAGGATGTTGCGT+TGG | + | chr1.4:15766194-15766213 | MS.gene59133:intron | 50.0% | |
| TGTCAGATCGCTAGAGACAG+AGG | + | chr1.4:15766388-15766407 | MS.gene59133:intron | 50.0% | |
| TTAACTGCTATTGCCCGGGT+TGG | + | chr1.4:15767729-15767748 | MS.gene59133:CDS | 50.0% | |
| TTAGCCGCTTCCTCTTCTAG+AGG | + | chr1.4:15767107-15767126 | MS.gene59133:intron | 50.0% | |
| TTGCTCCCTCAAGGCTACAT+TGG | - | chr1.4:15767504-15767523 | None:intergenic | 50.0% | |
| ! | GGTTTTGCAGGAAGGTGGTT+TGG | + | chr1.4:15765844-15765863 | MS.gene59133:CDS | 50.0% |
| ! | TGGGTGAAGACGGCTTTAAC+AGG | + | chr1.4:15767749-15767768 | MS.gene59133:CDS | 50.0% |
| AAAGCCGTCTTCACCCAACC+CGG | - | chr1.4:15767746-15767765 | None:intergenic | 55.0% | |
| AAGCTTTCCGAGCGACCAGA+AGG | + | chr1.4:15767692-15767711 | MS.gene59133:CDS | 55.0% | |
| AATAGGATAAGGGCGGGGTC+AGG | - | chr1.4:15767145-15767164 | None:intergenic | 55.0% | |
| ATGGAAGCTGGACATCAGGG+GGG | + | chr1.4:15767597-15767616 | MS.gene59133:CDS | 55.0% | |
| GATGGAAGCTGGACATCAGG+GGG | + | chr1.4:15767596-15767615 | MS.gene59133:CDS | 55.0% | |
| ! | AGCCGCTTCCTCTTCTAGAG+GGG | + | chr1.4:15767109-15767128 | MS.gene59133:intron | 55.0% |
| ! | GCAGGAAGGTGGTTTGGATG+TGG | + | chr1.4:15765850-15765869 | MS.gene59133:CDS | 55.0% |
| ! | TGCCCCTCTAGAAGAGGAAG+CGG | - | chr1.4:15767114-15767133 | None:intergenic | 55.0% |
| !! | GAACAGAGTGCTGGCTTGCT+GGG | + | chr1.4:15766135-15766154 | MS.gene59133:intron | 55.0% |
| AAGCCGTCTTCACCCAACCC+GGG | - | chr1.4:15767745-15767764 | None:intergenic | 60.0% | |
| ! | CTTCTGGCCTTCTGGTCGCT+CGG | - | chr1.4:15767702-15767721 | None:intergenic | 60.0% |
| ! | TTGCCCGGGTTGGGTGAAGA+CGG | + | chr1.4:15767739-15767758 | MS.gene59133:CDS | 60.0% |
| !! | GGAACAGAGTGCTGGCTTGC+TGG | + | chr1.4:15766134-15766153 | MS.gene59133:intron | 60.0% |
| GAAGCTGGACATCAGGGGGG+TGG | + | chr1.4:15767600-15767619 | MS.gene59133:CDS | 65.0% | |
| !! | CAGAGTGCTGGCTTGCTGGG+CGG | + | chr1.4:15766138-15766157 | MS.gene59133:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 15765335 | 15767889 | 15765335 | ID=MS.gene59133 |
| chr1.4 | mRNA | 15765335 | 15767889 | 15765335 | ID=MS.gene59133.t1;Parent=MS.gene59133 |
| chr1.4 | exon | 15765335 | 15765435 | 15765335 | ID=MS.gene59133.t1.exon1;Parent=MS.gene59133.t1 |
| chr1.4 | CDS | 15765335 | 15765435 | 15765335 | ID=cds.MS.gene59133.t1;Parent=MS.gene59133.t1 |
| chr1.4 | exon | 15765703 | 15765961 | 15765703 | ID=MS.gene59133.t1.exon2;Parent=MS.gene59133.t1 |
| chr1.4 | CDS | 15765703 | 15765961 | 15765703 | ID=cds.MS.gene59133.t1;Parent=MS.gene59133.t1 |
| chr1.4 | exon | 15766681 | 15766875 | 15766681 | ID=MS.gene59133.t1.exon3;Parent=MS.gene59133.t1 |
| chr1.4 | CDS | 15766681 | 15766875 | 15766681 | ID=cds.MS.gene59133.t1;Parent=MS.gene59133.t1 |
| chr1.4 | exon | 15767494 | 15767889 | 15767494 | ID=MS.gene59133.t1.exon4;Parent=MS.gene59133.t1 |
| chr1.4 | CDS | 15767494 | 15767889 | 15767494 | ID=cds.MS.gene59133.t1;Parent=MS.gene59133.t1 |
| Gene Sequence |
| Protein sequence |
