Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58346.t1 | XP_027905957.1 | 66.8 | 602 | 165 | 3 | 1 | 567 | 315 | 916 | 4.50E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58346.t1 | Q9M2E2 | 57.8 | 296 | 115 | 5 | 276 | 567 | 7 | 296 | 3.0e-86 | 320.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58346.t1 | A0A4D6MMJ2 | 68.1 | 586 | 163 | 4 | 1 | 567 | 1 | 581 | 3.9e-217 | 763.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene58346 | 0.814843 | 1.25E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene58346 | 0.830849 | 2.33E-55 | -1.69E-46 |
| MS.gene049488 | MS.gene58346 | 0.801963 | 7.03E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene58346 | 0.826869 | 2.14E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene58346 | 0.809345 | 1.98E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene58346 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene58346 | 0.813183 | 2.91E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene58346 | 0.841422 | 4.80E-58 | -1.69E-46 |
| MS.gene050400 | MS.gene58346 | 0.806847 | 6.74E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene58346 | 0.836244 | 1.05E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene58346 | 0.854933 | 8.85E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene58346 | 0.804988 | 1.66E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene58346 | 0.820639 | 6.17E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene58346 | 0.827417 | 1.58E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene58346 | 0.883791 | 3.33E-71 | -1.69E-46 |
| MS.gene051255 | MS.gene58346 | 0.8374 | 5.32E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene58346 | 0.82038 | 7.07E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene58346 | 0.830966 | 2.18E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene58346 | 0.825213 | 5.30E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene58346 | 0.813827 | 2.10E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene58346 | 0.817413 | 3.34E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene58346 | -0.807872 | 4.09E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene58346 | 0.834926 | 2.26E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene58346 | 0.837292 | 5.66E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene58346 | 0.827674 | 1.37E-54 | -1.69E-46 |
| MS.gene052322 | MS.gene58346 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene58346 | 0.820821 | 5.60E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene58346 | 0.806297 | 8.81E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene58346 | 0.818113 | 2.32E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene58346 | 0.809654 | 1.70E-50 | -1.69E-46 |
| MS.gene052999 | MS.gene58346 | 0.831414 | 1.69E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene58346 | 0.817412 | 3.34E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene58346 | 0.848859 | 4.68E-60 | -1.69E-46 |
| MS.gene053449 | MS.gene58346 | 0.822333 | 2.51E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene58346 | 0.846448 | 2.16E-59 | -1.69E-46 |
| MS.gene053813 | MS.gene58346 | 0.827907 | 1.21E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene58346 | 0.84058 | 7.98E-58 | -1.69E-46 |
| MS.gene054010 | MS.gene58346 | 0.816848 | 4.48E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene58346 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene58346 | 0.813365 | 2.66E-51 | -1.69E-46 |
| MS.gene054013 | MS.gene58346 | 0.809849 | 1.54E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene58346 | 0.821688 | 3.53E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene58346 | 0.812998 | 3.20E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene58346 | 0.866532 | 2.66E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene58346 | 0.823704 | 1.20E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene58346 | 0.804779 | 1.83E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene58346 | 0.828816 | 7.28E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene58346 | 0.821244 | 4.47E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene58346 | 0.821386 | 4.15E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene58346 | 0.854659 | 1.06E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene58346 | 0.825792 | 3.86E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene58346 | 0.847719 | 9.68E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene58346 | 0.861168 | 1.24E-63 | -1.69E-46 |
| MS.gene056659 | MS.gene58346 | 0.819764 | 9.78E-53 | -1.69E-46 |
| MS.gene056942 | MS.gene58346 | 0.801097 | 1.06E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene58346 | 0.808273 | 3.36E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene58346 | 0.810223 | 1.28E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene58346 | 0.827881 | 1.22E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene58346 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene58346 | 0.811595 | 6.47E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene58346 | 0.814757 | 1.31E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene58346 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene58346 | 0.854766 | 9.89E-62 | -1.69E-46 |
| MS.gene057823 | MS.gene58346 | 0.847746 | 9.52E-60 | -1.69E-46 |
| MS.gene057825 | MS.gene58346 | 0.817376 | 3.41E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene58346 | 0.825299 | 5.06E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene58346 | 0.808119 | 3.62E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene58346 | 0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene58346 | 0.809113 | 2.22E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene58346 | 0.839325 | 1.70E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene58346 | 0.836685 | 8.10E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene58346 | 0.832557 | 8.83E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene58346 | 0.82605 | 3.35E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene58346 | 0.805627 | 1.22E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene58346 | 0.814388 | 1.58E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene58346 | 0.844105 | 9.29E-59 | -1.69E-46 |
| MS.gene059294 | MS.gene58346 | 0.845484 | 3.95E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene58346 | 0.81207 | 5.10E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene58346 | 0.808344 | 3.24E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene58346 | 0.828621 | 8.12E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene58346 | 0.803234 | 3.84E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene58346 | 0.82492 | 6.21E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene58346 | 0.817711 | 2.86E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene58346 | 0.85839 | 8.52E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene58346 | 0.837743 | 4.34E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene58346 | 0.837519 | 4.95E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene58346 | 0.864204 | 1.44E-64 | -1.69E-46 |
| MS.gene059807 | MS.gene58346 | 0.82278 | 1.97E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene58346 | 0.806965 | 6.37E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene58346 | 0.814523 | 1.48E-51 | -1.69E-46 |
| MS.gene059974 | MS.gene58346 | 0.839676 | 1.37E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene58346 | 0.836026 | 1.19E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene58346 | 0.832413 | 9.59E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene58346 | 0.800679 | 1.29E-48 | -1.69E-46 |
| MS.gene060837 | MS.gene58346 | 0.861614 | 9.07E-64 | -1.69E-46 |
| MS.gene061041 | MS.gene58346 | 0.811018 | 8.63E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene58346 | 0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene58346 | 0.82615 | 3.18E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58346.t1 | MTR_8g031650 | 56.042 | 571 | 233 | 8 | 1 | 567 | 1 | 557 | 0.0 | 621 |
| MS.gene58346.t1 | MTR_8g031980 | 96.918 | 292 | 9 | 0 | 276 | 567 | 7 | 298 | 0.0 | 572 |
| MS.gene58346.t1 | MTR_8g031980 | 69.091 | 275 | 85 | 0 | 6 | 280 | 6 | 280 | 1.37e-136 | 399 |
| MS.gene58346.t1 | MTR_8g031960 | 89.420 | 293 | 30 | 1 | 276 | 567 | 8 | 300 | 0.0 | 530 |
| MS.gene58346.t1 | MTR_8g031960 | 69.091 | 275 | 83 | 2 | 7 | 280 | 8 | 281 | 6.46e-134 | 392 |
| MS.gene58346.t1 | MTR_8g031990 | 82.828 | 297 | 51 | 0 | 1 | 297 | 1 | 297 | 0.0 | 517 |
| MS.gene58346.t1 | MTR_8g031990 | 71.575 | 292 | 83 | 0 | 276 | 567 | 7 | 298 | 1.17e-148 | 429 |
| MS.gene58346.t1 | MTR_8g032010 | 84.483 | 290 | 44 | 1 | 1 | 289 | 1 | 290 | 0.0 | 511 |
| MS.gene58346.t1 | MTR_8g032010 | 69.153 | 295 | 91 | 0 | 273 | 567 | 4 | 298 | 1.47e-146 | 424 |
| MS.gene58346.t1 | MTR_8g032000 | 80.345 | 290 | 56 | 1 | 1 | 289 | 1 | 290 | 9.15e-172 | 488 |
| MS.gene58346.t1 | MTR_8g032000 | 70.890 | 292 | 85 | 0 | 276 | 567 | 7 | 298 | 5.11e-149 | 430 |
| MS.gene58346.t1 | MTR_8g032020 | 79.798 | 297 | 58 | 2 | 2 | 297 | 4 | 299 | 7.47e-170 | 483 |
| MS.gene58346.t1 | MTR_8g032020 | 71.959 | 296 | 82 | 1 | 273 | 567 | 5 | 300 | 2.65e-151 | 436 |
| MS.gene58346.t1 | MTR_8g031940 | 80.205 | 293 | 57 | 1 | 276 | 567 | 7 | 299 | 3.93e-165 | 471 |
| MS.gene58346.t1 | MTR_8g031940 | 63.918 | 291 | 103 | 2 | 1 | 289 | 1 | 291 | 4.03e-129 | 380 |
| MS.gene58346.t1 | MTR_8g031650 | 56.079 | 403 | 161 | 7 | 169 | 567 | 1 | 391 | 4.29e-154 | 447 |
| MS.gene58346.t1 | MTR_8g031650 | 55.319 | 282 | 122 | 3 | 10 | 289 | 104 | 383 | 1.94e-100 | 310 |
| MS.gene58346.t1 | MTR_7g076660 | 59.259 | 297 | 109 | 3 | 271 | 567 | 2 | 286 | 7.22e-120 | 355 |
| MS.gene58346.t1 | MTR_7g076660 | 55.714 | 280 | 112 | 2 | 1 | 280 | 1 | 268 | 1.13e-108 | 327 |
| MS.gene58346.t1 | MTR_7g076660 | 59.589 | 292 | 106 | 3 | 276 | 567 | 8 | 287 | 5.43e-119 | 353 |
| MS.gene58346.t1 | MTR_7g076660 | 55.636 | 275 | 110 | 2 | 6 | 280 | 7 | 269 | 9.28e-107 | 322 |
| MS.gene58346.t1 | MTR_7g076655 | 57.912 | 297 | 113 | 3 | 271 | 567 | 2 | 286 | 4.41e-117 | 348 |
| MS.gene58346.t1 | MTR_7g076655 | 54.138 | 290 | 120 | 3 | 1 | 289 | 1 | 278 | 4.35e-108 | 325 |
| MS.gene58346.t1 | MTR_8g031600 | 57.192 | 292 | 121 | 2 | 278 | 567 | 9 | 298 | 7.61e-111 | 333 |
| MS.gene58346.t1 | MTR_8g031600 | 55.319 | 282 | 122 | 2 | 1 | 280 | 1 | 280 | 3.03e-101 | 308 |
| MS.gene58346.t1 | MTR_8g031630 | 57.143 | 294 | 121 | 4 | 276 | 567 | 7 | 297 | 1.67e-109 | 329 |
| MS.gene58346.t1 | MTR_8g031630 | 54.983 | 291 | 127 | 3 | 1 | 289 | 1 | 289 | 4.95e-105 | 318 |
| MS.gene58346.t1 | MTR_8g031610 | 57.045 | 291 | 121 | 3 | 278 | 567 | 7 | 294 | 2.07e-109 | 329 |
| MS.gene58346.t1 | MTR_8g031610 | 54.770 | 283 | 125 | 2 | 8 | 289 | 6 | 286 | 7.66e-104 | 315 |
| MS.gene58346.t1 | MTR_7g076665 | 58.163 | 294 | 118 | 3 | 275 | 567 | 6 | 295 | 5.36e-109 | 328 |
| MS.gene58346.t1 | MTR_7g076665 | 55.474 | 274 | 117 | 3 | 7 | 279 | 7 | 276 | 5.47e-101 | 307 |
| MS.gene58346.t1 | MTR_8g031900 | 55.137 | 292 | 126 | 2 | 276 | 567 | 7 | 293 | 9.08e-109 | 327 |
| MS.gene58346.t1 | MTR_8g031900 | 52.857 | 280 | 127 | 2 | 1 | 280 | 1 | 275 | 1.31e-103 | 314 |
| MS.gene58346.t1 | MTR_8g031910 | 57.338 | 293 | 112 | 3 | 276 | 567 | 7 | 287 | 9.39e-109 | 327 |
| MS.gene58346.t1 | MTR_8g031910 | 55.674 | 282 | 112 | 3 | 1 | 281 | 1 | 270 | 9.80e-108 | 325 |
| MS.gene58346.t1 | MTR_7g076660 | 58.608 | 273 | 101 | 3 | 295 | 567 | 2 | 262 | 1.10e-108 | 326 |
| MS.gene58346.t1 | MTR_7g076660 | 54.902 | 255 | 103 | 2 | 26 | 280 | 2 | 244 | 3.68e-96 | 294 |
| MS.gene58346.t1 | MTR_5g062280 | 54.915 | 295 | 124 | 3 | 276 | 567 | 7 | 295 | 1.78e-106 | 322 |
| MS.gene58346.t1 | MTR_5g062280 | 49.481 | 289 | 144 | 1 | 1 | 289 | 1 | 287 | 7.04e-94 | 289 |
| MS.gene58346.t1 | MTR_8g032030 | 81.034 | 174 | 32 | 1 | 1 | 173 | 1 | 174 | 4.31e-92 | 282 |
| MS.gene58346.t1 | MTR_8g032030 | 77.976 | 168 | 36 | 1 | 276 | 442 | 7 | 174 | 3.38e-81 | 254 |
| MS.gene58346.t1 | MTR_3g079320 | 48.485 | 297 | 147 | 3 | 276 | 567 | 11 | 306 | 7.96e-85 | 266 |
| MS.gene58346.t1 | MTR_3g079320 | 47.143 | 280 | 142 | 3 | 6 | 280 | 10 | 288 | 1.57e-81 | 258 |
| MS.gene58346.t1 | MTR_8g031850 | 46.233 | 292 | 114 | 3 | 276 | 567 | 7 | 255 | 2.20e-81 | 255 |
| MS.gene58346.t1 | MTR_8g031850 | 43.929 | 280 | 114 | 3 | 1 | 280 | 1 | 237 | 1.37e-76 | 243 |
| MS.gene58346.t1 | MTR_7g106800 | 48.822 | 297 | 92 | 4 | 276 | 567 | 9 | 250 | 3.90e-81 | 255 |
| MS.gene58346.t1 | MTR_7g106800 | 42.230 | 296 | 110 | 4 | 7 | 296 | 9 | 249 | 2.27e-66 | 217 |
| MS.gene58346.t1 | MTR_5g083430 | 58.140 | 172 | 72 | 0 | 396 | 567 | 13 | 184 | 4.22e-66 | 213 |
| MS.gene58346.t1 | MTR_5g083430 | 54.839 | 155 | 70 | 0 | 127 | 281 | 13 | 167 | 9.85e-59 | 194 |
| MS.gene58346.t1 | MTR_3g098470 | 40.199 | 301 | 142 | 7 | 277 | 565 | 36 | 310 | 4.42e-64 | 212 |
| MS.gene58346.t1 | MTR_3g098470 | 41.115 | 287 | 132 | 6 | 5 | 280 | 33 | 293 | 5.50e-61 | 204 |
| MS.gene58346.t1 | MTR_1g031180 | 38.538 | 301 | 147 | 6 | 277 | 565 | 41 | 315 | 2.58e-57 | 194 |
| MS.gene58346.t1 | MTR_1g031180 | 37.979 | 287 | 141 | 6 | 5 | 280 | 38 | 298 | 1.04e-53 | 185 |
| MS.gene58346.t1 | MTR_4g087460 | 39.130 | 299 | 141 | 9 | 277 | 559 | 23 | 296 | 1.25e-55 | 190 |
| MS.gene58346.t1 | MTR_4g087460 | 35.336 | 283 | 143 | 7 | 5 | 272 | 20 | 277 | 3.45e-46 | 165 |
| MS.gene58346.t1 | MTR_8g096060 | 36.213 | 301 | 151 | 7 | 277 | 565 | 38 | 309 | 6.25e-52 | 180 |
| MS.gene58346.t1 | MTR_8g096060 | 34.843 | 287 | 147 | 6 | 5 | 280 | 35 | 292 | 3.83e-47 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58346.t1 | AT1G01800 | 57.483 | 294 | 120 | 4 | 276 | 567 | 5 | 295 | 5.46e-114 | 341 |
| MS.gene58346.t1 | AT1G01800 | 51.536 | 293 | 134 | 6 | 1 | 290 | 1 | 288 | 2.28e-100 | 306 |
| MS.gene58346.t1 | AT3G61220 | 57.770 | 296 | 115 | 5 | 276 | 567 | 7 | 296 | 9.61e-114 | 340 |
| MS.gene58346.t1 | AT3G61220 | 56.738 | 282 | 115 | 4 | 1 | 280 | 1 | 277 | 3.04e-109 | 329 |
| MS.gene58346.t1 | AT3G61220 | 57.770 | 296 | 115 | 5 | 276 | 567 | 14 | 303 | 1.67e-113 | 340 |
| MS.gene58346.t1 | AT3G61220 | 57.246 | 276 | 111 | 4 | 7 | 280 | 14 | 284 | 3.72e-108 | 326 |
| MS.gene58346.t1 | AT3G61220 | 57.770 | 296 | 115 | 5 | 276 | 567 | 38 | 327 | 6.32e-113 | 339 |
| MS.gene58346.t1 | AT3G61220 | 57.246 | 276 | 111 | 4 | 7 | 280 | 38 | 308 | 1.64e-107 | 325 |
| MS.gene58346.t1 | AT2G24190 | 55.932 | 295 | 122 | 5 | 276 | 567 | 7 | 296 | 1.99e-108 | 327 |
| MS.gene58346.t1 | AT2G24190 | 53.191 | 282 | 125 | 4 | 1 | 280 | 1 | 277 | 8.41e-102 | 310 |
| MS.gene58346.t1 | AT2G24190 | 55.932 | 295 | 122 | 5 | 276 | 567 | 12 | 301 | 2.52e-108 | 327 |
| MS.gene58346.t1 | AT2G24190 | 53.623 | 276 | 121 | 4 | 7 | 280 | 12 | 282 | 7.88e-101 | 307 |
| MS.gene58346.t1 | AT1G01800 | 55.502 | 209 | 90 | 2 | 359 | 567 | 55 | 260 | 5.19e-76 | 242 |
| MS.gene58346.t1 | AT1G01800 | 49.505 | 202 | 98 | 3 | 90 | 290 | 55 | 253 | 3.72e-65 | 213 |
| MS.gene58346.t1 | AT5G51030 | 37.874 | 301 | 149 | 6 | 277 | 565 | 39 | 313 | 5.66e-62 | 207 |
| MS.gene58346.t1 | AT5G51030 | 36.042 | 283 | 144 | 6 | 9 | 280 | 40 | 296 | 5.46e-52 | 181 |
| MS.gene58346.t1 | AT3G59710 | 40.559 | 286 | 140 | 7 | 278 | 559 | 21 | 280 | 1.43e-59 | 200 |
| MS.gene58346.t1 | AT3G59710 | 35.185 | 270 | 146 | 6 | 6 | 272 | 18 | 261 | 2.03e-46 | 165 |
| MS.gene58346.t1 | AT3G59710 | 40.559 | 286 | 140 | 7 | 278 | 559 | 31 | 290 | 2.53e-59 | 199 |
| MS.gene58346.t1 | AT3G59710 | 35.185 | 270 | 146 | 6 | 6 | 272 | 28 | 271 | 5.32e-46 | 164 |
| MS.gene58346.t1 | AT3G59710 | 40.559 | 286 | 140 | 7 | 278 | 559 | 50 | 309 | 4.45e-59 | 199 |
| MS.gene58346.t1 | AT3G59710 | 35.185 | 270 | 146 | 6 | 6 | 272 | 47 | 290 | 2.32e-45 | 163 |
| MS.gene58346.t1 | AT5G61830 | 38.411 | 302 | 149 | 6 | 277 | 565 | 38 | 315 | 2.35e-56 | 192 |
| MS.gene58346.t1 | AT5G61830 | 36.749 | 283 | 144 | 5 | 9 | 280 | 39 | 297 | 2.17e-47 | 168 |
| MS.gene58346.t1 | AT5G61830 | 38.411 | 302 | 149 | 6 | 277 | 565 | 38 | 315 | 2.35e-56 | 192 |
| MS.gene58346.t1 | AT5G61830 | 36.749 | 283 | 144 | 5 | 9 | 280 | 39 | 297 | 2.17e-47 | 168 |
| MS.gene58346.t1 | AT4G09750 | 27.483 | 302 | 144 | 10 | 279 | 563 | 47 | 290 | 1.54e-11 | 66.2 |
Find 101 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGCAAACTTGATATTC+TGG | 0.218733 | 8.2:+66197101 | MS.gene58346:CDS |
| TGCATTCAAATAAATTATTA+TGG | 0.237007 | 8.2:+66187869 | MS.gene58346:CDS |
| GATGATACATTCACAATTCT+TGG | 0.302082 | 8.2:-66198193 | None:intergenic |
| GAGAATAGATGAAGTGATAA+AGG | 0.304473 | 8.2:+66193637 | MS.gene58346:CDS |
| GATTTCGTCAAATCTCAATT+TGG | 0.316766 | 8.2:+66197084 | MS.gene58346:CDS |
| CAAGTTTGCCAAATTGAGAT+TGG | 0.342990 | 8.2:-66186756 | None:intergenic |
| TGCTTGCAAATAAACTATTA+TGG | 0.347231 | 8.2:+66198118 | MS.gene58346:CDS |
| AACTGAAGATGAAAAGAATA+AGG | 0.349020 | 8.2:+66198063 | MS.gene58346:CDS |
| GTGAATCAGATAACTTTAAG+AGG | 0.355227 | 8.2:-66198171 | None:intergenic |
| CATCGACTTTCTCTTCAGTT+AGG | 0.370807 | 8.2:-66198408 | None:intergenic |
| GGAAGCAGTGCTAACCTAAC+AGG | 0.391029 | 8.2:-66193878 | None:intergenic |
| ACAGGAGCAAACAAAGGAAT+TGG | 0.392287 | 8.2:+66186553 | MS.gene58346:CDS |
| GAAAAGAGGTCTTCATGCTT+TGG | 0.397535 | 8.2:+66196975 | MS.gene58346:CDS |
| ACTGGAGCAAACAAAGGAAT+TGG | 0.400758 | 8.2:+66196889 | MS.gene58346:CDS |
| CTTCAGCACTCGTTACAAAC+GGG | 0.402250 | 8.2:+66187389 | MS.gene58346:CDS |
| TAAAAGAGGTCTTCATGCTT+TGG | 0.402273 | 8.2:+66186639 | MS.gene58346:CDS |
| TTTCTAGAAGATTACAAAGA+AGG | 0.405469 | 8.2:+66198445 | MS.gene58346:CDS |
| TGCAGGATTGCAGTGGTGAC+TGG | 0.409146 | 8.2:+66196871 | MS.gene58346:intron |
| GAATTGGATTTGAGATAGTA+AGG | 0.414626 | 8.2:+66186569 | MS.gene58346:CDS |
| ATCCACTCTGGGAAAGTTAG+AGG | 0.414763 | 8.2:+66198213 | MS.gene58346:CDS |
| AGATTACAAAGAAGGTTCAT+TGG | 0.420124 | 8.2:+66198453 | MS.gene58346:CDS |
| ACAGATATTACTGGCAATAC+TGG | 0.424226 | 8.2:+66198607 | MS.gene58346:CDS |
| TATGTCATCACAGATATTAC+TGG | 0.425116 | 8.2:+66198598 | MS.gene58346:CDS |
| GTTAACAATGCAGGGATTAG+TGG | 0.425251 | 8.2:+66197819 | MS.gene58346:CDS |
| CTTCCCAATGGAAGTCCATC+TGG | 0.438433 | 8.2:+66198679 | MS.gene58346:CDS |
| ACAGATATAACTGCTAATAC+TGG | 0.439952 | 8.2:+66193824 | MS.gene58346:CDS |
| GTGTAGGCAGCAGCATATCT+AGG | 0.439970 | 8.2:-66193707 | None:intergenic |
| AGCAAAGGCTGGCCTAAAAC+TGG | 0.443573 | 8.2:+66198478 | MS.gene58346:CDS |
| AAGGTGCTGCTCATCCTGTT+AGG | 0.448829 | 8.2:+66193864 | MS.gene58346:CDS |
| TTGGAGACACTCAAAGCCTC+TGG | 0.450185 | 8.2:+66196994 | MS.gene58346:CDS |
| TGCATCAATTGTGTGTGTCC+TGG | 0.450557 | 8.2:+66193791 | MS.gene58346:CDS |
| CATCTGGCCGATTCTATAAC+CGG | 0.457876 | 8.2:+66198695 | MS.gene58346:CDS |
| ACACAATTGATGCAGAAGTT+AGG | 0.460671 | 8.2:-66193782 | None:intergenic |
| TTTAGGCATGCAGTGGTGAC+AGG | 0.461628 | 8.2:+66186535 | MS.gene58346:intron |
| AGTCAATGTATCATCAGGAT+TGG | 0.466786 | 8.2:+66187952 | MS.gene58346:CDS |
| GTTAAGCAGTTAGCTTCAGC+TGG | 0.466868 | 8.2:+66196922 | MS.gene58346:CDS |
| ATAATTGAAGGAGGGGAAGA+AGG | 0.467120 | 8.2:-66187913 | None:intergenic |
| TAAATGCAGGTTAACAATGC+AGG | 0.468436 | 8.2:+66197810 | MS.gene58346:intron |
| GTCAATGTATCATCAGGATT+GGG | 0.471976 | 8.2:+66187953 | MS.gene58346:CDS |
| ACACTATTGACGCTTAAAGT+AGG | 0.472178 | 8.2:-66198565 | None:intergenic |
| ACTTCAGCACTCGTTACAAA+CGG | 0.482058 | 8.2:+66187388 | MS.gene58346:CDS |
| ATTTGGCAAACTTGATATGC+TGG | 0.485598 | 8.2:+66186765 | MS.gene58346:CDS |
| GAGTGGGCTAAAGGTGTCTT+CGG | 0.491982 | 8.2:+66193590 | MS.gene58346:CDS |
| ATAACATAGTACTAATCAAA+AGG | 0.493573 | 8.2:-66198731 | None:intergenic |
| TACAGGGCATACAAAATGAA+TGG | 0.493728 | 8.2:+66198356 | MS.gene58346:intron |
| TCGGCCAGATGGACTTCCAT+TGG | 0.494561 | 8.2:-66198683 | None:intergenic |
| GTAAGGCAGTTAGCTTCAGC+TGG | 0.501587 | 8.2:+66186586 | MS.gene58346:CDS |
| ACAGTAGTCAATGTATCATC+AGG | 0.503429 | 8.2:+66187947 | MS.gene58346:CDS |
| GTTAACAATGCTGGGATTGG+CGG | 0.504625 | 8.2:+66187337 | MS.gene58346:CDS |
| TGTGAATGTATCATCCACTC+TGG | 0.506460 | 8.2:+66198201 | MS.gene58346:CDS |
| CAGGTTAACAATGCTGGGAT+TGG | 0.506992 | 8.2:+66187334 | MS.gene58346:intron |
| CACTATTGACGCTTAAAGTA+GGG | 0.509329 | 8.2:-66198564 | None:intergenic |
| ATTGTGCAGGTTAACAATGC+TGG | 0.509851 | 8.2:+66187328 | MS.gene58346:intron |
| ATTTGTTACTACCTTTCTCT+CGG | 0.512650 | 8.2:-66186394 | None:intergenic |
| ATCAGGATTGGGCAAGATAG+AGG | 0.513958 | 8.2:+66187964 | MS.gene58346:CDS |
| CTTCGGTCCGGTTATAGAAT+CGG | 0.515136 | 8.2:-66198702 | None:intergenic |
| GGTTTCTTTACAGTAGAAGA+AGG | 0.515734 | 8.2:+66193845 | MS.gene58346:CDS |
| CGGCCAGATGGACTTCCATT+GGG | 0.515928 | 8.2:-66198682 | None:intergenic |
| GAAGGGTCCTTAGAAAGAAA+AGG | 0.520604 | 8.2:+66193680 | MS.gene58346:CDS |
| ATATCTGTGATGACATAGCC+AGG | 0.520953 | 8.2:-66198592 | None:intergenic |
| TTGGTGAATCAGATAATTGA+AGG | 0.521489 | 8.2:-66187925 | None:intergenic |
| CTCTTCATTTAGGCATGCAG+TGG | 0.531024 | 8.2:+66186528 | MS.gene58346:intron |
| ATATGGAAGAACCGAGAGAA+AGG | 0.532039 | 8.2:+66186383 | None:intergenic |
| GTGAATCAGATAATTGAAGG+AGG | 0.544477 | 8.2:-66187922 | None:intergenic |
| CGGTTATAGAATCGGCCAGA+TGG | 0.546690 | 8.2:-66198694 | None:intergenic |
| GAATCAGATAATTGAAGGAG+GGG | 0.548419 | 8.2:-66187920 | None:intergenic |
| AAATGCAGGTTAACAATGCA+GGG | 0.549998 | 8.2:+66197811 | MS.gene58346:intron |
| AGCGTCAATAGTGTTTGCCC+TGG | 0.550735 | 8.2:+66198574 | MS.gene58346:CDS |
| TGTCTTTCATCAACTAGATG+TGG | 0.551632 | 8.2:+66186696 | MS.gene58346:CDS |
| TGAATCAGATAACTTTAAGA+GGG | 0.554155 | 8.2:-66198170 | None:intergenic |
| ACATCAAGAGATGATAAAAG+AGG | 0.556229 | 8.2:+66186625 | MS.gene58346:CDS |
| TGAATCAGATAATTGAAGGA+GGG | 0.564567 | 8.2:-66187921 | None:intergenic |
| GATGATACATTGACTACTGT+TGG | 0.570138 | 8.2:-66187944 | None:intergenic |
| TTGTGCAGGTTAACAATGCT+GGG | 0.573954 | 8.2:+66187329 | MS.gene58346:intron |
| AGAAGCTTTAGCAACAGTGT+AGG | 0.575020 | 8.2:-66193723 | None:intergenic |
| GGTCTCTTAACTGCTGAAGA+AGG | 0.578507 | 8.2:+66198628 | MS.gene58346:CDS |
| GTATCAAATGAGTGGGCTAA+AGG | 0.579326 | 8.2:+66193581 | MS.gene58346:CDS |
| ACTGCAAGAGATGAGAAAAG+AGG | 0.580383 | 8.2:+66196961 | MS.gene58346:CDS |
| GTTCATTGGAAAGCAAAGGC+TGG | 0.581607 | 8.2:+66198467 | MS.gene58346:CDS |
| TAATCAAAAGGAAGAGACTT+CGG | 0.585840 | 8.2:-66198719 | None:intergenic |
| TACCTCTAACTTTCCCAGAG+TGG | 0.586644 | 8.2:-66198215 | None:intergenic |
| GTGAATGTATCATCCACTCT+GGG | 0.594044 | 8.2:+66198202 | MS.gene58346:CDS |
| ATCAGTGTGTATCAAATGAG+TGG | 0.595416 | 8.2:+66193573 | MS.gene58346:intron |
| ACTTTGCTGATCTCTAACAC+TGG | 0.599722 | 8.2:+66197870 | MS.gene58346:CDS |
| TATCTGATGATGAATTGAGA+AGG | 0.601830 | 8.2:+66187813 | MS.gene58346:CDS |
| GAAGGTTCATTGGAAAGCAA+AGG | 0.604153 | 8.2:+66198463 | MS.gene58346:CDS |
| ATCTGATGATGAATTGAGAA+GGG | 0.606653 | 8.2:+66187814 | MS.gene58346:CDS |
| TCAGTGTGTATCAAATGAGT+GGG | 0.608435 | 8.2:+66193574 | MS.gene58346:intron |
| AAAAGGAAGAGACTTCGGTC+CGG | 0.622969 | 8.2:-66198714 | None:intergenic |
| AAGCTAGCACTACTTCCCAA+TGG | 0.625738 | 8.2:+66198667 | MS.gene58346:CDS |
| GGTCCTTAGAAAGAAAAGGT+TGG | 0.636847 | 8.2:+66193684 | MS.gene58346:CDS |
| TTCAGCACTCGTTACAAACG+GGG | 0.638318 | 8.2:+66187390 | MS.gene58346:CDS |
| GTGGTGACAGGAGCAAACAA+AGG | 0.660509 | 8.2:+66186547 | MS.gene58346:CDS |
| TGTGGCTAATGCTGCAAGTG+TGG | 0.661469 | 8.2:+66197050 | MS.gene58346:CDS |
| GTGGTGACTGGAGCAAACAA+AGG | 0.662474 | 8.2:+66196883 | MS.gene58346:CDS |
| AACAAAATCAGATAAACCAG+AGG | 0.663643 | 8.2:-66197010 | None:intergenic |
| AGCTTCAGCTGGAATCAAAG+TGG | 0.664366 | 8.2:+66186597 | MS.gene58346:CDS |
| AAAGGCTGGCCTAAAACTGG+TGG | 0.667637 | 8.2:+66198481 | MS.gene58346:CDS |
| ATTTGTTTGCAGGATTGCAG+TGG | 0.668507 | 8.2:+66196864 | MS.gene58346:intron |
| GAATCAGATAACTTTAAGAG+GGG | 0.681558 | 8.2:-66198169 | None:intergenic |
| TATCTGTGATGACATAGCCA+GGG | 0.683408 | 8.2:-66198591 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 66186385 | 66198738 | 66186385 | ID=MS.gene58346 |
| chr8.2 | mRNA | 66186385 | 66198738 | 66186385 | ID=MS.gene58346.t1;Parent=MS.gene58346 |
| chr8.2 | exon | 66186385 | 66186404 | 66186385 | ID=MS.gene58346.t1.exon1;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66186385 | 66186404 | 66186385 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66186540 | 66186786 | 66186540 | ID=MS.gene58346.t1.exon2;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66186540 | 66186786 | 66186540 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66187337 | 66187411 | 66187337 | ID=MS.gene58346.t1.exon3;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66187337 | 66187411 | 66187337 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66187809 | 66187985 | 66187809 | ID=MS.gene58346.t1.exon4;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66187809 | 66187985 | 66187809 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66193578 | 66193885 | 66193578 | ID=MS.gene58346.t1.exon5;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66193578 | 66193885 | 66193578 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66196876 | 66197122 | 66196876 | ID=MS.gene58346.t1.exon6;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66196876 | 66197122 | 66196876 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66197819 | 66197893 | 66197819 | ID=MS.gene58346.t1.exon7;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66197819 | 66197893 | 66197819 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66198058 | 66198234 | 66198058 | ID=MS.gene58346.t1.exon8;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66198058 | 66198234 | 66198058 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| chr8.2 | exon | 66198361 | 66198738 | 66198361 | ID=MS.gene58346.t1.exon9;Parent=MS.gene58346.t1 |
| chr8.2 | CDS | 66198361 | 66198738 | 66198361 | ID=cds.MS.gene58346.t1;Parent=MS.gene58346.t1 |
| Gene Sequence |
| Protein sequence |
