Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019531.t1 | XP_003627602.1 | 96.6 | 292 | 10 | 0 | 4 | 295 | 7 | 298 | 5.70E-157 | 563.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019531.t1 | Q9M2E2 | 59.3 | 295 | 112 | 5 | 4 | 295 | 7 | 296 | 7.1e-92 | 338.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019531.t1 | G7LBU0 | 96.6 | 292 | 10 | 0 | 4 | 295 | 7 | 298 | 4.1e-157 | 563.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019531.t1 | MTR_8g032010 | 96.575 | 292 | 10 | 0 | 4 | 295 | 7 | 298 | 0.0 | 584 |
| MS.gene019531.t1 | MTR_8g031990 | 86.301 | 292 | 40 | 0 | 4 | 295 | 7 | 298 | 0.0 | 530 |
| MS.gene019531.t1 | MTR_8g032020 | 83.618 | 293 | 47 | 1 | 4 | 295 | 8 | 300 | 0.0 | 506 |
| MS.gene019531.t1 | MTR_8g032000 | 82.534 | 292 | 51 | 0 | 4 | 295 | 7 | 298 | 0.0 | 505 |
| MS.gene019531.t1 | MTR_8g031960 | 71.134 | 291 | 84 | 0 | 2 | 292 | 6 | 296 | 2.02e-153 | 431 |
| MS.gene019531.t1 | MTR_8g031980 | 70.205 | 292 | 87 | 0 | 4 | 295 | 7 | 298 | 2.79e-153 | 430 |
| MS.gene019531.t1 | MTR_8g031940 | 66.553 | 293 | 97 | 1 | 4 | 295 | 7 | 299 | 1.26e-142 | 403 |
| MS.gene019531.t1 | MTR_7g076660 | 58.703 | 293 | 109 | 3 | 3 | 295 | 6 | 286 | 1.76e-125 | 359 |
| MS.gene019531.t1 | MTR_7g076655 | 58.362 | 293 | 110 | 3 | 3 | 295 | 6 | 286 | 7.37e-125 | 358 |
| MS.gene019531.t1 | MTR_7g076660 | 58.219 | 292 | 110 | 3 | 4 | 295 | 8 | 287 | 4.25e-124 | 356 |
| MS.gene019531.t1 | MTR_8g031900 | 56.849 | 292 | 121 | 2 | 4 | 295 | 7 | 293 | 4.08e-120 | 346 |
| MS.gene019531.t1 | MTR_8g031630 | 59.524 | 294 | 114 | 4 | 4 | 295 | 7 | 297 | 1.82e-119 | 345 |
| MS.gene019531.t1 | MTR_8g031910 | 58.020 | 293 | 110 | 3 | 4 | 295 | 7 | 287 | 4.73e-119 | 343 |
| MS.gene019531.t1 | MTR_8g031600 | 59.386 | 293 | 115 | 2 | 5 | 295 | 8 | 298 | 9.68e-119 | 343 |
| MS.gene019531.t1 | MTR_8g031610 | 58.904 | 292 | 116 | 3 | 5 | 295 | 6 | 294 | 2.57e-118 | 342 |
| MS.gene019531.t1 | MTR_8g031650 | 59.107 | 291 | 114 | 4 | 7 | 295 | 104 | 391 | 3.07e-115 | 337 |
| MS.gene019531.t1 | MTR_8g031650 | 62.136 | 103 | 37 | 2 | 166 | 266 | 1 | 103 | 1.14e-38 | 140 |
| MS.gene019531.t1 | MTR_7g076665 | 57.432 | 296 | 117 | 5 | 3 | 295 | 6 | 295 | 5.11e-115 | 333 |
| MS.gene019531.t1 | MTR_8g031650 | 59.107 | 291 | 114 | 4 | 7 | 295 | 270 | 557 | 2.71e-113 | 338 |
| MS.gene019531.t1 | MTR_8g031650 | 60.000 | 265 | 102 | 3 | 4 | 266 | 7 | 269 | 5.21e-105 | 317 |
| MS.gene019531.t1 | MTR_7g076660 | 57.143 | 273 | 105 | 3 | 23 | 295 | 2 | 262 | 4.34e-113 | 327 |
| MS.gene019531.t1 | MTR_5g062280 | 52.397 | 292 | 136 | 2 | 4 | 295 | 7 | 295 | 1.29e-104 | 307 |
| MS.gene019531.t1 | MTR_8g032030 | 82.738 | 168 | 28 | 1 | 4 | 170 | 7 | 174 | 1.35e-94 | 279 |
| MS.gene019531.t1 | MTR_3g079320 | 48.485 | 297 | 147 | 3 | 4 | 295 | 11 | 306 | 6.62e-92 | 275 |
| MS.gene019531.t1 | MTR_8g031850 | 47.603 | 292 | 110 | 3 | 4 | 295 | 7 | 255 | 3.72e-90 | 269 |
| MS.gene019531.t1 | MTR_7g106800 | 47.797 | 295 | 94 | 3 | 2 | 291 | 7 | 246 | 1.58e-83 | 252 |
| MS.gene019531.t1 | MTR_5g083430 | 55.556 | 171 | 76 | 0 | 125 | 295 | 14 | 184 | 3.03e-70 | 215 |
| MS.gene019531.t1 | MTR_3g098470 | 41.980 | 293 | 133 | 6 | 6 | 287 | 37 | 303 | 2.28e-69 | 218 |
| MS.gene019531.t1 | MTR_1g031180 | 38.567 | 293 | 143 | 5 | 6 | 287 | 42 | 308 | 1.51e-58 | 190 |
| MS.gene019531.t1 | MTR_8g096060 | 36.519 | 293 | 146 | 6 | 6 | 287 | 39 | 302 | 1.37e-54 | 179 |
| MS.gene019531.t1 | MTR_4g087460 | 36.455 | 299 | 149 | 8 | 6 | 288 | 24 | 297 | 2.43e-51 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019531.t1 | AT3G61220 | 59.322 | 295 | 112 | 5 | 4 | 295 | 7 | 296 | 5.59e-123 | 353 |
| MS.gene019531.t1 | AT3G61220 | 59.322 | 295 | 112 | 5 | 4 | 295 | 14 | 303 | 1.54e-122 | 353 |
| MS.gene019531.t1 | AT3G61220 | 59.322 | 295 | 112 | 5 | 4 | 295 | 38 | 327 | 5.25e-122 | 352 |
| MS.gene019531.t1 | AT1G01800 | 56.463 | 294 | 123 | 4 | 4 | 295 | 5 | 295 | 4.77e-117 | 338 |
| MS.gene019531.t1 | AT2G24190 | 56.271 | 295 | 121 | 5 | 4 | 295 | 7 | 296 | 2.24e-115 | 334 |
| MS.gene019531.t1 | AT2G24190 | 55.892 | 297 | 123 | 5 | 2 | 295 | 10 | 301 | 2.65e-115 | 334 |
| MS.gene019531.t1 | AT1G01800 | 54.067 | 209 | 93 | 2 | 87 | 295 | 55 | 260 | 2.36e-79 | 241 |
| MS.gene019531.t1 | AT5G51030 | 38.225 | 293 | 144 | 7 | 6 | 287 | 40 | 306 | 7.16e-62 | 198 |
| MS.gene019531.t1 | AT5G61830 | 38.163 | 283 | 140 | 4 | 6 | 277 | 39 | 297 | 7.67e-52 | 172 |
| MS.gene019531.t1 | AT5G61830 | 38.163 | 283 | 140 | 4 | 6 | 277 | 39 | 297 | 7.67e-52 | 172 |
| MS.gene019531.t1 | AT3G59710 | 35.540 | 287 | 155 | 6 | 6 | 288 | 21 | 281 | 4.09e-51 | 170 |
| MS.gene019531.t1 | AT3G59710 | 35.889 | 287 | 154 | 7 | 6 | 288 | 31 | 291 | 6.15e-51 | 170 |
| MS.gene019531.t1 | AT3G59710 | 35.889 | 287 | 154 | 7 | 6 | 288 | 50 | 310 | 9.60e-51 | 170 |
Find 59 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGCAAACTTGATATTC+TGG | 0.218733 | 8.1:+70351426 | MS.gene019531:CDS |
| GGAACCTTCTTCAAAATCTT+TGG | 0.239520 | 8.1:-70353436 | None:intergenic |
| TGCATTCAAATAAATTACTA+TGG | 0.252132 | 8.1:+70352715 | MS.gene019531:CDS |
| CATCTATTCTCTCTTCTGTT+AGG | 0.258784 | 8.1:-70353395 | None:intergenic |
| AAAAGGATGGCCAAGATATT+TGG | 0.282941 | 8.1:+70353467 | MS.gene019531:CDS |
| ACAGGATCAAACAAAGGAAT+TGG | 0.337640 | 8.1:+70351214 | MS.gene019531:CDS |
| ATTAGTTTGTATCGAATGAA+TGG | 0.371859 | 8.1:+70353343 | MS.gene019531:intron |
| CTTTGCAGTAACTCTTGTAT+AGG | 0.376480 | 8.1:-70353523 | None:intergenic |
| GGAAGCAGTGCTAACCTAAC+AGG | 0.386990 | 8.1:-70353648 | None:intergenic |
| GTTAACAATGCTGGGATTAA+CGG | 0.398592 | 8.1:+70352254 | MS.gene019531:CDS |
| GTCAAGTACTCATTACGAAC+GGG | 0.428471 | 8.1:+70352306 | MS.gene019531:CDS |
| CTTCCTAATGGTAGTCCATC+TGG | 0.430212 | 8.1:+70353666 | MS.gene019531:CDS |
| CTCAGGTATGCAGTGGTGAC+AGG | 0.432509 | 8.1:+70351196 | MS.gene019531:intron |
| GAATTGGGTTAGAGATAGTA+AGG | 0.433738 | 8.1:+70351230 | MS.gene019531:CDS |
| ACAGATATAACTGCTAATAC+TGG | 0.439952 | 8.1:+70353594 | MS.gene019531:CDS |
| AGGTTAGCACTGCTTCCTAA+TGG | 0.443491 | 8.1:+70353654 | MS.gene019531:CDS |
| CATCTGGCGTTTACTATATC+CGG | 0.447301 | 8.1:+70353682 | MS.gene019531:CDS |
| AACACAATTGATGCAGAAGT+TGG | 0.450034 | 8.1:-70353553 | None:intergenic |
| GTATAGGCAGCCAAATATCT+TGG | 0.452873 | 8.1:-70353477 | None:intergenic |
| TGCATCAATTGTGTTTGCCC+TGG | 0.456872 | 8.1:+70353561 | MS.gene019531:CDS |
| AAGGTGCTGCTAATCCTGTT+AGG | 0.465183 | 8.1:+70353634 | MS.gene019531:CDS |
| AGAAGCTTTAGCAACAGTAT+AGG | 0.466477 | 8.1:-70353493 | None:intergenic |
| GTCAATGTATCATCAGGATT+GGG | 0.471976 | 8.1:+70352799 | MS.gene019531:CDS |
| AGTCAATGTATCATCAGGAT+TGG | 0.473356 | 8.1:+70352798 | MS.gene019531:CDS |
| ACGCCAGATGGACTACCATT+AGG | 0.483185 | 8.1:-70353669 | None:intergenic |
| GAAGGTTCCTTAGAAAGAAA+AGG | 0.484128 | 8.1:+70353450 | MS.gene019531:CDS |
| AGAGTAGTCAATGTATCATC+AGG | 0.484821 | 8.1:+70352793 | MS.gene019531:CDS |
| TCCATATAAAATCATCAAAA+CGG | 0.490861 | 8.1:-70353717 | None:intergenic |
| GCATTCAAATAAATTACTAT+GGG | 0.492881 | 8.1:+70352716 | MS.gene019531:CDS |
| TTAGTTTGTATCGAATGAAT+GGG | 0.494173 | 8.1:+70353344 | MS.gene019531:intron |
| CAGGATCAAACAAAGGAATT+GGG | 0.495598 | 8.1:+70351215 | MS.gene019531:CDS |
| ATTGTGTAGGTTAACAATGC+TGG | 0.496371 | 8.1:+70352245 | MS.gene019531:intron |
| GTAAGGCAGTTAGCTTCAGC+TGG | 0.501587 | 8.1:+70351247 | MS.gene019531:CDS |
| TTGGAAACACTCAAAGCCTC+TGG | 0.513549 | 8.1:+70351319 | MS.gene019531:CDS |
| ATCAGGATTGGGCAAGATAG+AGG | 0.513958 | 8.1:+70352810 | MS.gene019531:CDS |
| ATAACTGAAGGAGGGGAAGA+AGG | 0.515357 | 8.1:-70352759 | None:intergenic |
| GGTTTCTTTACAGTAGAAGA+AGG | 0.515734 | 8.1:+70353615 | MS.gene019531:CDS |
| CGGATATAGTAAACGCCAGA+TGG | 0.522787 | 8.1:-70353681 | None:intergenic |
| ACACAATTGATGCAGAAGTT+GGG | 0.527501 | 8.1:-70353552 | None:intergenic |
| GTATCGAATGAATGGGCTAA+AGG | 0.528870 | 8.1:+70353351 | MS.gene019531:CDS |
| TGTATATATTCATGGTGTTG+AGG | 0.548651 | 8.1:+70350920 | None:intergenic |
| TTGTGTAGGTTAACAATGCT+GGG | 0.550993 | 8.1:+70352246 | MS.gene019531:intron |
| AAAACGGATAGACTTCATTC+CGG | 0.560354 | 8.1:-70353701 | None:intergenic |
| GATGATACATTGACTACTCT+CGG | 0.561191 | 8.1:-70352790 | None:intergenic |
| CCTCTTTCTCAGGTATGCAG+TGG | 0.572591 | 8.1:+70351189 | MS.gene019531:intron |
| TGTCTTTCATCAACTAGATG+TGG | 0.588252 | 8.1:+70351357 | MS.gene019531:CDS |
| GAATCAGATAACTGAAGGAG+GGG | 0.602575 | 8.1:-70352766 | None:intergenic |
| TGAATCAGATAACTGAAGGA+GGG | 0.607788 | 8.1:-70352767 | None:intergenic |
| AGTCAAGTACTCATTACGAA+CGG | 0.617703 | 8.1:+70352305 | MS.gene019531:CDS |
| GTGAATCAGATAACTGAAGG+AGG | 0.636792 | 8.1:-70352768 | None:intergenic |
| AATCTGATGAGGAATTGAGA+AGG | 0.642308 | 8.1:+70352659 | MS.gene019531:CDS |
| GTTCCTTAGAAAGAAAAGGA+TGG | 0.646946 | 8.1:+70353454 | MS.gene019531:CDS |
| CTTGCAGGCACAATCTGATG+AGG | 0.653126 | 8.1:+70352648 | MS.gene019531:intron |
| TCGGTGAATCAGATAACTGA+AGG | 0.655905 | 8.1:-70352771 | None:intergenic |
| CATTCAAATAAATTACTATG+GGG | 0.662211 | 8.1:+70352717 | MS.gene019531:CDS |
| AGCTTCAGCTGGAATCAAAG+TGG | 0.664366 | 8.1:+70351258 | MS.gene019531:CDS |
| AACAAAATCTGAAAGACCAG+AGG | 0.671329 | 8.1:-70351335 | None:intergenic |
| GTGGTGACAGGATCAAACAA+AGG | 0.683284 | 8.1:+70351208 | MS.gene019531:CDS |
| TCAAGTACTCATTACGAACG+GGG | 0.752274 | 8.1:+70352307 | MS.gene019531:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr8.1:70352962-70352981 | MS.gene019531:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr8.1:70352981-70352962 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr8.1:70352961-70352980 | MS.gene019531:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr8.1:70352980-70352961 | None:intergenic | 0.0% |
| !! | AAACAAATTCAAAAAAAAAA+AGG | - | chr8.1:70352196-70352215 | None:intergenic | 10.0% |
| !! | AACAAATTCAAAAAAAAAAA+GGG | - | chr8.1:70352195-70352214 | None:intergenic | 10.0% |
| !! | AAACATACTTAATTATATCT+TGG | - | chr8.1:70351525-70351544 | None:intergenic | 15.0% |
| !! | CTATTAATAATAAGATCAAA+CGG | + | chr8.1:70350977-70350996 | MS.gene019531:intron | 15.0% |
| !! | TTTGATCTTATTATTAATAG+TGG | - | chr8.1:70350977-70350996 | None:intergenic | 15.0% |
| !!! | TTTAAAACAATCAAACTTAA+GGG | - | chr8.1:70351500-70351519 | None:intergenic | 15.0% |
| !!! | TTTTAAAACAATCAAACTTA+AGG | - | chr8.1:70351501-70351520 | None:intergenic | 15.0% |
| !! | CATTCAAATAAATTACTATG+GGG | + | chr8.1:70352717-70352736 | MS.gene019531:CDS | 20.0% |
| !! | CTAGTAAAATGATCTTTAAT+GGG | - | chr8.1:70352506-70352525 | None:intergenic | 20.0% |
| !! | GCATTCAAATAAATTACTAT+GGG | + | chr8.1:70352716-70352735 | MS.gene019531:CDS | 20.0% |
| !! | TAATGGGAAATATTGATATT+TGG | - | chr8.1:70352490-70352509 | None:intergenic | 20.0% |
| !! | TCTAGTAAAATGATCTTTAA+TGG | - | chr8.1:70352507-70352526 | None:intergenic | 20.0% |
| !! | TGCATTCAAATAAATTACTA+TGG | + | chr8.1:70352715-70352734 | MS.gene019531:CDS | 20.0% |
| !!! | AAATCATTACTCATTTTTCA+AGG | + | chr8.1:70352893-70352912 | MS.gene019531:intron | 20.0% |
| !!! | AACATCAATGTTGTTATTTT+CGG | - | chr8.1:70352623-70352642 | None:intergenic | 20.0% |
| !!! | ATAATGCAAATTTAGTTCAA+AGG | - | chr8.1:70353298-70353317 | None:intergenic | 20.0% |
| !!! | ATAATTTTCATAACATGTGT+TGG | - | chr8.1:70352343-70352362 | None:intergenic | 20.0% |
| !!! | GATTTTATCAAATCTCAATT+TGG | + | chr8.1:70351409-70351428 | MS.gene019531:CDS | 20.0% |
| !!! | TTTTGTATGAATTTGTATGA+GGG | + | chr8.1:70352000-70352019 | MS.gene019531:intron | 20.0% |
| !!! | TTTTTGTATGAATTTGTATG+AGG | + | chr8.1:70351999-70352018 | MS.gene019531:intron | 20.0% |
| ! | ACATTAAAGGAATGCATATT+TGG | + | chr8.1:70351578-70351597 | MS.gene019531:intron | 25.0% |
| ! | CATATCTTTGTCTAGTATTA+TGG | + | chr8.1:70352560-70352579 | MS.gene019531:intron | 25.0% |
| ! | TAACAAAGATTGTATTGTGT+AGG | + | chr8.1:70352232-70352251 | MS.gene019531:intron | 25.0% |
| ! | TATTATTAATAGTGGTCCTT+TGG | - | chr8.1:70350969-70350988 | None:intergenic | 25.0% |
| ! | TCAAGAAATGTATGAAATTG+AGG | - | chr8.1:70352414-70352433 | None:intergenic | 25.0% |
| ! | TTTGTATGAATTTGTATGAG+GGG | + | chr8.1:70352001-70352020 | MS.gene019531:intron | 25.0% |
| !! | ATTCCTTTAATGTGTGTTTT+CGG | - | chr8.1:70351571-70351590 | None:intergenic | 25.0% |
| !!! | ATTAGTTTGTATCGAATGAA+TGG | + | chr8.1:70353343-70353362 | MS.gene019531:intron | 25.0% |
| !!! | CAAATTGACTACTTTTTATC+TGG | - | chr8.1:70351714-70351733 | None:intergenic | 25.0% |
| !!! | TTAGTTTGTATCGAATGAAT+GGG | + | chr8.1:70353344-70353363 | MS.gene019531:intron | 25.0% |
| !!! | TTTACCAAAGATTTTGAAGA+AGG | + | chr8.1:70353432-70353451 | MS.gene019531:CDS | 25.0% |
| ACACCTTCATAAAAAGTAGT+TGG | + | chr8.1:70353093-70353112 | MS.gene019531:intron | 30.0% | |
| ACAGATATAACTGCTAATAC+TGG | + | chr8.1:70353594-70353613 | MS.gene019531:CDS | 30.0% | |
| ATAAAAGACACCTTCACAAA+AGG | + | chr8.1:70353148-70353167 | MS.gene019531:intron | 30.0% | |
| ATTTGGCAAACTTGATATTC+TGG | + | chr8.1:70351426-70351445 | MS.gene019531:CDS | 30.0% | |
| CATTCAAAGAAAATTCCACA+AGG | - | chr8.1:70351972-70351991 | None:intergenic | 30.0% | |
| TCAATCAGTTATAATCCTTG+TGG | + | chr8.1:70351954-70351973 | MS.gene019531:intron | 30.0% | |
| TCACAAAACAAAGAGAAACT+AGG | - | chr8.1:70351863-70351882 | None:intergenic | 30.0% | |
| !! | CTGATTGAAACAAAAGTGTT+TGG | - | chr8.1:70351942-70351961 | None:intergenic | 30.0% |
| !!! | ACACCAACTACTTTTTATGA+AGG | - | chr8.1:70353099-70353118 | None:intergenic | 30.0% |
| !!! | ACTAACTGTTTTTTCCGTTA+AGG | + | chr8.1:70351903-70351922 | MS.gene019531:intron | 30.0% |
| !!! | ATATCTGTTTTGACATATCC+AGG | - | chr8.1:70353582-70353601 | None:intergenic | 30.0% |
| !!! | CTAACTGTTTTTTCCGTTAA+GGG | + | chr8.1:70351904-70351923 | MS.gene019531:intron | 30.0% |
| !!! | TAACTGTTTTTTCCGTTAAG+GGG | + | chr8.1:70351905-70351924 | MS.gene019531:intron | 30.0% |
| !!! | TATCTGTTTTGACATATCCA+GGG | - | chr8.1:70353581-70353600 | None:intergenic | 30.0% |
| AAAAAGAGGTCTTCATGCTT+TGG | + | chr8.1:70351300-70351319 | MS.gene019531:CDS | 35.0% | |
| AAAACGGATAGACTTCATTC+CGG | - | chr8.1:70353704-70353723 | None:intergenic | 35.0% | |
| AAAAGGATGGCCAAGATATT+TGG | + | chr8.1:70353467-70353486 | MS.gene019531:CDS | 35.0% | |
| AAAGAGAAACTAGGTTAGCA+AGG | - | chr8.1:70351854-70351873 | None:intergenic | 35.0% | |
| AAAGTGAAAATCACACCTTG+AGG | - | chr8.1:70353050-70353069 | None:intergenic | 35.0% | |
| AACAAAATCTGAAAGACCAG+AGG | - | chr8.1:70351338-70351357 | None:intergenic | 35.0% | |
| AACACAATTGATGCAGAAGT+TGG | - | chr8.1:70353556-70353575 | None:intergenic | 35.0% | |
| AATCTGATGAGGAATTGAGA+AGG | + | chr8.1:70352659-70352678 | MS.gene019531:CDS | 35.0% | |
| ACACAATTGATGCAGAAGTT+GGG | - | chr8.1:70353555-70353574 | None:intergenic | 35.0% | |
| ACAGGATCAAACAAAGGAAT+TGG | + | chr8.1:70351214-70351233 | MS.gene019531:CDS | 35.0% | |
| ACTCCGAAAACACACATTAA+AGG | + | chr8.1:70351565-70351584 | MS.gene019531:intron | 35.0% | |
| ACTGCAAGAGATGAAAAAAG+AGG | + | chr8.1:70351286-70351305 | MS.gene019531:CDS | 35.0% | |
| AGAGTAGTCAATGTATCATC+AGG | + | chr8.1:70352793-70352812 | MS.gene019531:CDS | 35.0% | |
| AGTCAAGTACTCATTACGAA+CGG | + | chr8.1:70352305-70352324 | MS.gene019531:CDS | 35.0% | |
| AGTCAATGTATCATCAGGAT+TGG | + | chr8.1:70352798-70352817 | MS.gene019531:CDS | 35.0% | |
| ATTGTGTAGGTTAACAATGC+TGG | + | chr8.1:70352245-70352264 | MS.gene019531:intron | 35.0% | |
| CAAAAAAAAAAAGGGCAACC+CGG | - | chr8.1:70352187-70352206 | None:intergenic | 35.0% | |
| CACCTTCATAAAAAGTAGTG+TGG | + | chr8.1:70353005-70353024 | MS.gene019531:intron | 35.0% | |
| CAGGATCAAACAAAGGAATT+GGG | + | chr8.1:70351215-70351234 | MS.gene019531:CDS | 35.0% | |
| CATCTATTCTCTCTTCTGTT+AGG | - | chr8.1:70353398-70353417 | None:intergenic | 35.0% | |
| CTTTGCAGTAACTCTTGTAT+AGG | - | chr8.1:70353526-70353545 | None:intergenic | 35.0% | |
| GAAGGTTCCTTAGAAAGAAA+AGG | + | chr8.1:70353450-70353469 | MS.gene019531:CDS | 35.0% | |
| GGAACCTTCTTCAAAATCTT+TGG | - | chr8.1:70353439-70353458 | None:intergenic | 35.0% | |
| GGTTTCTTTACAGTAGAAGA+AGG | + | chr8.1:70353615-70353634 | MS.gene019531:CDS | 35.0% | |
| GTAAATGACAACGATGATGA+GGG | - | chr8.1:70351818-70351837 | None:intergenic | 35.0% | |
| GTAGTCAATTTGATACGAAC+AGG | + | chr8.1:70351722-70351741 | MS.gene019531:intron | 35.0% | |
| GTCAATGTATCATCAGGATT+GGG | + | chr8.1:70352799-70352818 | MS.gene019531:CDS | 35.0% | |
| GTTAACAATGCTGGGATTAA+CGG | + | chr8.1:70352254-70352273 | MS.gene019531:CDS | 35.0% | |
| GTTCCTTAGAAAGAAAAGGA+TGG | + | chr8.1:70353454-70353473 | MS.gene019531:CDS | 35.0% | |
| TAGTTTGAGCTAAGAGTTAC+AGG | - | chr8.1:70351078-70351097 | None:intergenic | 35.0% | |
| TATCCATCATGCATATGTAC+TGG | + | chr8.1:70352443-70352462 | MS.gene019531:intron | 35.0% | |
| TCAATATCTGCTTATTGCGA+GGG | - | chr8.1:70351115-70351134 | None:intergenic | 35.0% | |
| TGAATCAGATAACTGAAGGA+GGG | - | chr8.1:70352770-70352789 | None:intergenic | 35.0% | |
| TGTCTTTCATCAACTAGATG+TGG | + | chr8.1:70351357-70351376 | MS.gene019531:CDS | 35.0% | |
| TTAATAGTGGTCCTTTGGTT+TGG | - | chr8.1:70350964-70350983 | None:intergenic | 35.0% | |
| TTGTGTAGGTTAACAATGCT+GGG | + | chr8.1:70352246-70352265 | MS.gene019531:intron | 35.0% | |
| TTTCCAGTACATATGCATGA+TGG | - | chr8.1:70352449-70352468 | None:intergenic | 35.0% | |
| TTTGTGATGCTCATCTTGTT+AGG | + | chr8.1:70351876-70351895 | MS.gene019531:intron | 35.0% | |
| ! | AACTTAAGGGAGTACAAAAC+AGG | - | chr8.1:70351487-70351506 | None:intergenic | 35.0% |
| ! | AGAAGCTTTAGCAACAGTAT+AGG | - | chr8.1:70353496-70353515 | None:intergenic | 35.0% |
| ! | ATAGAAGACACCTTTTGTGA+AGG | - | chr8.1:70353161-70353180 | None:intergenic | 35.0% |
| ! | GAATTGGGTTAGAGATAGTA+AGG | + | chr8.1:70351230-70351249 | MS.gene019531:CDS | 35.0% |
| ! | GATGATACATTGACTACTCT+CGG | - | chr8.1:70352793-70352812 | None:intergenic | 35.0% |
| ! | TTTTATCAAGTCACACCTCA+AGG | + | chr8.1:70353032-70353051 | MS.gene019531:intron | 35.0% |
| !! | CATTGATGTTCTTAACTTGC+AGG | + | chr8.1:70352633-70352652 | MS.gene019531:intron | 35.0% |
| !!! | CACACTACTTTTTATGAAGG+TGG | - | chr8.1:70353007-70353026 | None:intergenic | 35.0% |
| !!! | CACCACACTACTTTTTATGA+AGG | - | chr8.1:70353010-70353029 | None:intergenic | 35.0% |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr8.1:70352089-70352108 | MS.gene019531:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr8.1:70352090-70352109 | MS.gene019531:intron | 40.0% | |
| AGAAAGAGGAAGAACACACA+AGG | - | chr8.1:70351178-70351197 | None:intergenic | 40.0% | |
| ATTTGTATGAGGGGTAACCT+TGG | + | chr8.1:70352010-70352029 | MS.gene019531:intron | 40.0% | |
| CATACAACAGTAGTCAACTG+TGG | + | chr8.1:70351789-70351808 | MS.gene019531:intron | 40.0% | |
| CATCTGGCGTTTACTATATC+CGG | + | chr8.1:70353682-70353701 | MS.gene019531:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr8.1:70352121-70352140 | MS.gene019531:intron | 40.0% | |
| CTAAGAGTTACAGGAATTGG+AGG | - | chr8.1:70351069-70351088 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr8.1:70352095-70352114 | MS.gene019531:intron | 40.0% | |
| GAATCAGATAACTGAAGGAG+GGG | - | chr8.1:70352769-70352788 | None:intergenic | 40.0% | |
| GAGCTAAGAGTTACAGGAAT+TGG | - | chr8.1:70351072-70351091 | None:intergenic | 40.0% | |
| GATAATCTCCAACCCCTTAA+CGG | - | chr8.1:70351920-70351939 | None:intergenic | 40.0% | |
| GGTAAATGACAACGATGATG+AGG | - | chr8.1:70351819-70351838 | None:intergenic | 40.0% | |
| GTATAGGCAGCCAAATATCT+TGG | - | chr8.1:70353480-70353499 | None:intergenic | 40.0% | |
| GTCAAGTACTCATTACGAAC+GGG | + | chr8.1:70352306-70352325 | MS.gene019531:CDS | 40.0% | |
| GTCAATATCTGCTTATTGCG+AGG | - | chr8.1:70351116-70351135 | None:intergenic | 40.0% | |
| GTGAATCAGATAACTGAAGG+AGG | - | chr8.1:70352771-70352790 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr8.1:70352046-70352065 | MS.gene019531:intron | 40.0% | |
| TCAAGTACTCATTACGAACG+GGG | + | chr8.1:70352307-70352326 | MS.gene019531:CDS | 40.0% | |
| TCGGTGAATCAGATAACTGA+AGG | - | chr8.1:70352774-70352793 | None:intergenic | 40.0% | |
| ! | ATCATCGTTGTCATTTACCG+TGG | + | chr8.1:70351820-70351839 | MS.gene019531:intron | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr8.1:70352097-70352116 | None:intergenic | 40.0% |
| ! | TGGCCATCCTTTTCTTTCTA+AGG | - | chr8.1:70353460-70353479 | None:intergenic | 40.0% |
| ! | TTAGCAAGGTTTTCTGTCCA+CGG | - | chr8.1:70351840-70351859 | None:intergenic | 40.0% |
| !! | GTATCGAATGAATGGGCTAA+AGG | + | chr8.1:70353351-70353370 | MS.gene019531:CDS | 40.0% |
| !!! | TGTTTTTTCCGTTAAGGGGT+TGG | + | chr8.1:70351909-70351928 | MS.gene019531:intron | 40.0% |
| AGCTTCAGCTGGAATCAAAG+TGG | + | chr8.1:70351258-70351277 | MS.gene019531:CDS | 45.0% | |
| AGGTTAGCACTGCTTCCTAA+TGG | + | chr8.1:70353654-70353673 | MS.gene019531:CDS | 45.0% | |
| AGGTTTATTCCCCCTATCGA+TGG | + | chr8.1:70351645-70351664 | MS.gene019531:intron | 45.0% | |
| AGTCAAACTCCCATCGATAG+GGG | - | chr8.1:70351658-70351677 | None:intergenic | 45.0% | |
| ATAACTGAAGGAGGGGAAGA+AGG | - | chr8.1:70352762-70352781 | None:intergenic | 45.0% | |
| ATCAGGATTGGGCAAGATAG+AGG | + | chr8.1:70352810-70352829 | MS.gene019531:CDS | 45.0% | |
| ATCTGCTTATTGCGAGGGTT+AGG | - | chr8.1:70351110-70351129 | None:intergenic | 45.0% | |
| CAACTTTACTAGTTGCGCCA+AGG | - | chr8.1:70352030-70352049 | None:intergenic | 45.0% | |
| CGGATATAGTAAACGCCAGA+TGG | - | chr8.1:70353684-70353703 | None:intergenic | 45.0% | |
| CTCTGCTTGAGTTTGAATCC+AGG | + | chr8.1:70351042-70351061 | MS.gene019531:intron | 45.0% | |
| CTTCCTAATGGTAGTCCATC+TGG | + | chr8.1:70353666-70353685 | MS.gene019531:CDS | 45.0% | |
| GAGTCAAACTCCCATCGATA+GGG | - | chr8.1:70351659-70351678 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr8.1:70352120-70352139 | MS.gene019531:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr8.1:70352117-70352136 | MS.gene019531:intron | 45.0% | |
| GGTTTATTCCCCCTATCGAT+GGG | + | chr8.1:70351646-70351665 | MS.gene019531:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr8.1:70352052-70352071 | MS.gene019531:intron | 45.0% | |
| GTGGTGACAGGATCAAACAA+AGG | + | chr8.1:70351208-70351227 | MS.gene019531:CDS | 45.0% | |
| GTGTGTTCTTCCTCTTTCTC+AGG | + | chr8.1:70351179-70351198 | MS.gene019531:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr8.1:70352053-70352072 | MS.gene019531:intron | 45.0% | |
| TGCATCAATTGTGTTTGCCC+TGG | + | chr8.1:70353561-70353580 | MS.gene019531:CDS | 45.0% | |
| TTGGAAACACTCAAAGCCTC+TGG | + | chr8.1:70351319-70351338 | MS.gene019531:CDS | 45.0% | |
| ! | CTTTTTATCTGGACCGTCGA+AGG | - | chr8.1:70351703-70351722 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8.1:70352086-70352105 | None:intergenic | 45.0% |
| !! | AAGGTGCTGCTAATCCTGTT+AGG | + | chr8.1:70353634-70353653 | MS.gene019531:CDS | 45.0% |
| AGATGGTGAGGCCAAACCAA+AGG | + | chr8.1:70350950-70350969 | MS.gene019531:intron | 50.0% | |
| ATTGAGGATCCAGTCAGTGC+AGG | - | chr8.1:70352398-70352417 | None:intergenic | 50.0% | |
| CCACTGCATACCTGAGAAAG+AGG | - | chr8.1:70351192-70351211 | None:intergenic | 50.0% | |
| CCTCTTTCTCAGGTATGCAG+TGG | + | chr8.1:70351189-70351208 | MS.gene019531:intron | 50.0% | |
| CGAGTCAAACTCCCATCGAT+AGG | - | chr8.1:70351660-70351679 | None:intergenic | 50.0% | |
| CTTGCAGGCACAATCTGATG+AGG | + | chr8.1:70352648-70352667 | MS.gene019531:intron | 50.0% | |
| GCCATATTCCTCCTGTCTTC+CGG | + | chr8.1:70351600-70351619 | MS.gene019531:intron | 50.0% | |
| GGAAGCAGTGCTAACCTAAC+AGG | - | chr8.1:70353651-70353670 | None:intergenic | 50.0% | |
| GGAATAAACCTCCACACGAG+AGG | - | chr8.1:70351636-70351655 | None:intergenic | 50.0% | |
| GTCAAACTCCCATCGATAGG+GGG | - | chr8.1:70351657-70351676 | None:intergenic | 50.0% | |
| GTTACAGGAATTGGAGGTCC+TGG | - | chr8.1:70351063-70351082 | None:intergenic | 50.0% | |
| TCCGGAAGACAGGAGGAATA+TGG | - | chr8.1:70351604-70351623 | None:intergenic | 50.0% | |
| TTGAGGATCCAGTCAGTGCA+GGG | - | chr8.1:70352397-70352416 | None:intergenic | 50.0% | |
| ! | GTAAGGCAGTTAGCTTCAGC+TGG | + | chr8.1:70351247-70351266 | MS.gene019531:CDS | 50.0% |
| ! | TGATACAACCCTGCACTGAC+TGG | + | chr8.1:70352386-70352405 | MS.gene019531:intron | 50.0% |
| !! | ACGCCAGATGGACTACCATT+AGG | - | chr8.1:70353672-70353691 | None:intergenic | 50.0% |
| !! | GGTGTTGAGGTTGATGGAGA+TGG | + | chr8.1:70350933-70350952 | MS.gene019531:intron | 50.0% |
| !! | TGAGGTTGATGGAGATGGTG+AGG | + | chr8.1:70350938-70350957 | MS.gene019531:intron | 50.0% |
| AAACCTCCACACGAGAGGAG+AGG | - | chr8.1:70351631-70351650 | None:intergenic | 55.0% | |
| AACCTCCACACGAGAGGAGA+GGG | - | chr8.1:70351630-70351649 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr8.1:70352065-70352084 | MS.gene019531:intron | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr8.1:70352161-70352180 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr8.1:70352160-70352179 | None:intergenic | 55.0% | |
| CTCAGGTATGCAGTGGTGAC+AGG | + | chr8.1:70351196-70351215 | MS.gene019531:intron | 55.0% | |
| TATCTGGACCGTCGAAGGTG+AGG | - | chr8.1:70351698-70351717 | None:intergenic | 55.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr8.1:70352148-70352167 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr8.1:70352148-70352167 | MS.gene019531:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr8.1:70352149-70352168 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr8.1:70352149-70352168 | MS.gene019531:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr8.1:70352165-70352184 | MS.gene019531:intron | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8.1:70352133-70352152 | MS.gene019531:intron | 60.0% |
| AGGGAGCTCCGGAAGACAGG+AGG | - | chr8.1:70351611-70351630 | None:intergenic | 65.0% | |
| CACCGCCTCCTCACCTTCGA+CGG | + | chr8.1:70351687-70351706 | MS.gene019531:intron | 65.0% | |
| CACGAGAGGAGAGGGAGCTC+CGG | - | chr8.1:70351622-70351641 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr8.1:70352150-70352169 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8.1:70352135-70352154 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr8.1:70352154-70352173 | None:intergenic | 65.0% | |
| CTCCCTCTCCTCTCGTGTGG+AGG | + | chr8.1:70351625-70351644 | MS.gene019531:intron | 65.0% | |
| CTGGACCGTCGAAGGTGAGG+AGG | - | chr8.1:70351695-70351714 | None:intergenic | 65.0% | |
| GACCGTCGAAGGTGAGGAGG+CGG | - | chr8.1:70351692-70351711 | None:intergenic | 65.0% | |
| GAGAGGGAGCTCCGGAAGAC+AGG | - | chr8.1:70351614-70351633 | None:intergenic | 65.0% | |
| GAGCTCCCTCTCCTCTCGTG+TGG | + | chr8.1:70351622-70351641 | MS.gene019531:intron | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr8.1:70352155-70352174 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr8.1:70352166-70352185 | MS.gene019531:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 70350931 | 70353725 | 70350931 | ID=MS.gene019531 |
| chr8.1 | mRNA | 70350931 | 70353725 | 70350931 | ID=MS.gene019531.t1;Parent=MS.gene019531 |
| chr8.1 | exon | 70350931 | 70350941 | 70350931 | ID=MS.gene019531.t1.exon1;Parent=MS.gene019531.t1 |
| chr8.1 | CDS | 70350931 | 70350941 | 70350931 | ID=cds.MS.gene019531.t1;Parent=MS.gene019531.t1 |
| chr8.1 | exon | 70351201 | 70351447 | 70351201 | ID=MS.gene019531.t1.exon2;Parent=MS.gene019531.t1 |
| chr8.1 | CDS | 70351201 | 70351447 | 70351201 | ID=cds.MS.gene019531.t1;Parent=MS.gene019531.t1 |
| chr8.1 | exon | 70352254 | 70352328 | 70352254 | ID=MS.gene019531.t1.exon3;Parent=MS.gene019531.t1 |
| chr8.1 | CDS | 70352254 | 70352328 | 70352254 | ID=cds.MS.gene019531.t1;Parent=MS.gene019531.t1 |
| chr8.1 | exon | 70352655 | 70352831 | 70352655 | ID=MS.gene019531.t1.exon4;Parent=MS.gene019531.t1 |
| chr8.1 | CDS | 70352655 | 70352831 | 70352655 | ID=cds.MS.gene019531.t1;Parent=MS.gene019531.t1 |
| chr8.1 | exon | 70353348 | 70353725 | 70353348 | ID=MS.gene019531.t1.exon5;Parent=MS.gene019531.t1 |
| chr8.1 | CDS | 70353348 | 70353725 | 70353348 | ID=cds.MS.gene019531.t1;Parent=MS.gene019531.t1 |
| Gene Sequence |
| Protein sequence |
