AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60927

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60927.t1 MTR_2g063000 91.102 472 8 1 1 438 1 472 0.0 889
MS.gene60927.t1 MTR_2g063000 91.176 442 34 2 1 438 1 441 0.0 838
MS.gene60927.t1 MTR_2g062990 81.013 474 51 3 1 438 1 471 0.0 792
MS.gene60927.t1 MTR_2g081620 78.038 469 69 2 1 435 1 469 0.0 758
MS.gene60927.t1 MTR_2g062980 77.895 475 64 4 1 437 1 472 0.0 756
MS.gene60927.t1 MTR_1g095560 52.203 454 176 6 14 430 8 457 1.47e-170 486
MS.gene60927.t1 MTR_1g095560 48.765 486 176 7 14 430 8 489 9.95e-164 470
MS.gene60927.t1 MTR_1g095540 49.784 464 192 5 1 430 1 457 6.65e-162 464
MS.gene60927.t1 MTR_7g013790 44.731 465 210 8 9 431 7 466 3.50e-143 417
MS.gene60927.t1 MTR_3g079590 46.279 430 187 8 36 433 76 493 4.57e-131 387
MS.gene60927.t1 MTR_3g079570 45.116 430 191 8 36 433 77 493 1.27e-129 384
MS.gene60927.t1 MTR_3g079560 42.953 447 211 7 16 430 57 491 1.29e-128 381
MS.gene60927.t1 MTR_3g079600 43.304 448 203 9 26 433 59 495 1.34e-125 373
MS.gene60927.t1 MTR_2g012860 42.759 435 202 7 42 432 45 476 1.10e-124 370
MS.gene60927.t1 MTR_4g122950 41.350 474 225 7 8 430 7 478 4.73e-124 369
MS.gene60927.t1 MTR_3g034290 41.871 449 214 10 24 434 56 495 3.82e-122 364
MS.gene60927.t1 MTR_3g079630 43.764 441 191 9 36 433 76 502 1.05e-121 363
MS.gene60927.t1 MTR_3g079620 42.661 436 197 8 36 430 76 499 6.47e-121 362
MS.gene60927.t1 MTR_4g075150 43.764 441 199 11 31 429 28 461 2.14e-119 356
MS.gene60927.t1 MTR_1g021010 43.794 427 192 8 40 432 77 489 4.71e-119 356
MS.gene60927.t1 MTR_1g020090 41.958 429 199 8 36 431 88 499 2.45e-118 355
MS.gene60927.t1 MTR_4g075150 43.341 443 200 11 31 429 28 463 2.79e-118 353
MS.gene60927.t1 MTR_4g122960 41.102 472 227 8 8 430 7 476 6.63e-118 353
MS.gene60927.t1 MTR_4g089155 40.460 435 212 8 42 432 57 488 5.81e-115 346
MS.gene60927.t1 MTR_1g021020 42.791 430 198 9 36 432 76 490 5.97e-115 346
MS.gene60927.t1 MTR_2g012850 40.046 437 217 8 36 430 33 466 1.76e-113 341
MS.gene60927.t1 MTR_0003s0560 42.191 429 204 10 35 430 71 488 2.65e-113 342
MS.gene60927.t1 MTR_3g090130 36.534 427 230 8 42 429 32 456 9.24e-95 293
MS.gene60927.t1 MTR_5g072570 35.841 452 242 9 21 429 15 461 1.66e-93 290
MS.gene60927.t1 MTR_3g034290 41.160 362 167 9 24 348 56 408 5.54e-92 284
MS.gene60927.t1 MTR_3g434850 36.795 443 218 14 36 431 29 456 1.53e-89 279
MS.gene60927.t1 MTR_3g090150 35.648 432 229 10 42 429 37 463 3.60e-89 279
MS.gene60927.t1 MTR_8g099930 35.232 474 250 13 1 429 1 462 4.64e-89 278
MS.gene60927.t1 MTR_3g498755 35.666 443 230 12 36 431 13 447 3.40e-86 270
MS.gene60927.t1 MTR_2g449850 36.652 442 218 13 36 430 37 463 1.77e-85 269
MS.gene60927.t1 MTR_7g021130 34.101 434 230 12 42 429 34 457 6.85e-80 254
MS.gene60927.t1 MTR_1g040370 34.339 431 202 11 36 429 29 415 1.06e-79 253
MS.gene60927.t1 MTR_8g011350 30.738 488 255 11 20 428 12 495 3.54e-69 228
MS.gene60927.t1 MTR_0003s0560 39.777 269 124 7 35 271 71 333 7.96e-62 204
MS.gene60927.t1 MTR_7g080180 29.938 481 244 15 35 428 24 498 4.38e-59 201
MS.gene60927.t1 MTR_7g051430 27.823 496 274 10 10 425 1 492 5.45e-59 201
MS.gene60927.t1 MTR_1g102130 32.927 410 250 14 36 429 90 490 1.09e-58 200
MS.gene60927.t1 MTR_8g011350 29.501 461 242 11 20 401 12 468 1.71e-58 199
MS.gene60927.t1 MTR_7g080180 28.889 450 224 15 35 398 24 463 7.32e-48 170
MS.gene60927.t1 MTR_2g018590 26.458 480 284 16 3 428 5 469 1.26e-43 159
MS.gene60927.t1 MTR_4g021520 27.842 431 256 12 42 424 43 466 2.27e-43 158
MS.gene60927.t1 MTR_2g018630 27.083 432 264 12 38 424 36 461 7.46e-43 157
MS.gene60927.t1 MTR_4g021535 28.146 437 247 15 42 424 39 462 1.11e-42 156
MS.gene60927.t1 MTR_2g018600 27.314 443 264 13 38 428 33 469 1.24e-42 156
MS.gene60927.t1 MTR_4g021510 27.506 429 248 13 42 418 42 459 4.56e-42 155
MS.gene60927.t1 MTR_4g021530 25.380 461 282 14 14 424 18 466 1.05e-40 151
MS.gene60927.t1 MTR_4g021500 27.842 431 252 13 42 422 43 464 1.63e-40 154
MS.gene60927.t1 MTR_4g021500 26.047 430 251 13 49 424 485 901 2.39e-36 142
MS.gene60927.t1 MTR_4g021500 27.842 431 252 13 42 422 43 464 2.02e-40 154
MS.gene60927.t1 MTR_4g021500 26.923 416 247 14 49 424 485 883 9.76e-37 143
MS.gene60927.t1 MTR_7g051430 26.794 418 223 9 10 348 1 414 1.76e-39 147
MS.gene60927.t1 MTR_3g100420 25.000 476 291 14 8 424 24 492 3.67e-38 145
MS.gene60927.t1 MTR_4g021490 25.629 437 258 13 42 424 43 466 1.44e-36 140
MS.gene60927.t1 MTR_4g021520 27.735 393 230 11 42 387 43 428 2.17e-35 136
MS.gene60927.t1 MTR_4g057585 27.896 423 229 12 53 425 96 492 5.65e-35 135
MS.gene60927.t1 MTR_4g021535 28.256 407 238 18 42 424 39 415 1.22e-34 134
MS.gene60927.t1 MTR_4g057595 27.660 423 230 12 53 425 97 493 1.35e-34 135
MS.gene60927.t1 MTR_2g095730 24.561 456 268 14 19 425 66 494 1.45e-33 132
MS.gene60927.t1 MTR_2g095750 26.606 436 229 14 53 430 100 502 1.54e-33 132
MS.gene60927.t1 MTR_4g057570 25.702 463 262 12 18 425 54 489 2.12e-33 131
MS.gene60927.t1 MTR_3g045770 25.346 434 268 12 38 424 26 450 9.85e-33 129
MS.gene60927.t1 MTR_2g095710 26.147 436 262 15 24 425 71 480 1.58e-31 126
MS.gene60927.t1 MTR_1g050545 27.423 423 236 15 51 425 81 480 1.27e-30 124
MS.gene60927.t1 MTR_2g018630 26.623 308 210 8 126 424 56 356 7.37e-29 116
MS.gene60927.t1 MTR_0075s0010 26.211 351 198 12 35 368 5 311 1.94e-28 114
MS.gene60927.t1 MTR_1g094155 26.730 419 239 16 53 425 90 486 5.50e-28 116
MS.gene60927.t1 MTR_4g057600 25.000 428 235 15 53 425 95 491 2.64e-26 111
MS.gene60927.t1 MTR_2g009200 24.194 434 235 14 30 405 19 416 1.76e-24 105
MS.gene60927.t1 MTR_1g051175 44.048 84 43 3 48 130 21 101 1.34e-16 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60927.t1 AT4G30810 56.317 467 167 4 1 432 1 465 0.0 550
MS.gene60927.t1 AT3G07990 50.113 441 185 4 23 429 18 457 1.61e-159 458
MS.gene60927.t1 AT2G35780 50.917 436 168 6 32 429 24 451 1.38e-158 456
MS.gene60927.t1 AT4G30610 47.174 460 199 7 11 429 6 462 4.70e-148 429
MS.gene60927.t1 AT2G24010 47.696 434 184 8 32 429 25 451 4.32e-139 406
MS.gene60927.t1 AT3G02110 44.328 476 213 9 1 429 1 471 4.88e-139 407
MS.gene60927.t1 AT2G24000 46.697 439 189 7 32 428 25 460 4.06e-138 404
MS.gene60927.t1 AT2G24010 45.880 449 185 9 32 429 25 466 1.03e-133 393
MS.gene60927.t1 AT2G24010 43.562 466 181 9 40 429 3 462 1.49e-127 377
MS.gene60927.t1 AT2G35770 42.795 458 214 10 10 430 13 459 4.39e-124 368
MS.gene60927.t1 AT2G24000 45.455 407 178 7 32 428 25 397 3.47e-121 358
MS.gene60927.t1 AT3G63470 41.514 436 206 10 32 429 73 497 2.03e-115 347
MS.gene60927.t1 AT5G23210 41.612 459 206 10 30 431 44 497 2.95e-115 347
MS.gene60927.t1 AT1G61130 39.387 457 232 8 13 429 9 460 7.89e-115 345
MS.gene60927.t1 AT1G11080 37.996 479 238 8 7 429 14 489 2.26e-113 342
MS.gene60927.t1 AT1G11080 37.996 479 238 8 7 429 14 489 2.48e-113 342
MS.gene60927.t1 AT4G15100 36.998 473 244 7 8 430 14 482 5.66e-111 335
MS.gene60927.t1 AT5G08260 37.474 475 240 10 10 430 6 477 2.15e-110 334
MS.gene60927.t1 AT3G17180 39.238 446 220 8 33 430 34 476 1.18e-107 327
MS.gene60927.t1 AT1G43780 35.208 480 258 13 1 433 1 474 3.77e-97 300
MS.gene60927.t1 AT3G52020 36.636 434 231 10 32 429 73 498 7.84e-95 295
MS.gene60927.t1 AT5G23210 40.602 399 178 7 90 431 6 402 9.46e-95 291
MS.gene60927.t1 AT2G05850 34.452 447 241 10 24 429 49 484 2.40e-94 293
MS.gene60927.t1 AT5G23210 39.709 413 187 10 30 385 44 451 4.45e-94 291
MS.gene60927.t1 AT5G23210 40.404 396 177 7 93 431 8 401 1.09e-93 288
MS.gene60927.t1 AT2G12480 34.526 475 265 9 1 438 1 466 1.23e-93 290
MS.gene60927.t1 AT2G24010 43.611 360 146 8 40 348 3 356 1.56e-93 286
MS.gene60927.t1 AT5G42240 37.587 431 224 8 42 429 36 464 1.28e-92 288
MS.gene60927.t1 AT3G52000 36.117 443 235 13 24 429 48 479 4.55e-92 287
MS.gene60927.t1 AT3G52010 35.814 430 225 11 40 429 66 484 2.62e-91 285
MS.gene60927.t1 AT3G17180 37.250 400 201 7 33 385 34 430 6.90e-89 277
MS.gene60927.t1 AT2G33530 38.462 442 213 14 36 429 32 462 2.77e-88 276
MS.gene60927.t1 AT5G42230 33.045 463 262 10 12 429 1 460 2.05e-86 272
MS.gene60927.t1 AT5G42230 33.045 463 262 10 12 429 1 460 2.05e-86 272
MS.gene60927.t1 AT1G28110 35.909 440 225 13 36 429 30 458 4.28e-85 268
MS.gene60927.t1 AT1G28110 35.909 440 225 13 36 429 30 458 4.28e-85 268
MS.gene60927.t1 AT2G12480 32.911 474 250 9 1 438 1 442 1.23e-83 264
MS.gene60927.t1 AT2G12480 32.700 474 249 10 1 438 1 440 6.95e-82 259
MS.gene60927.t1 AT2G12480 32.632 475 249 11 1 438 1 441 4.28e-80 254
MS.gene60927.t1 AT5G23210 38.000 350 158 7 93 385 8 355 1.76e-72 232
MS.gene60927.t1 AT4G12910 30.200 500 262 11 6 428 8 497 2.48e-71 233
MS.gene60927.t1 AT3G25420 30.687 466 240 10 42 428 33 494 1.69e-69 228
MS.gene60927.t1 AT4G12910 28.821 458 240 10 6 387 8 455 9.74e-58 196
MS.gene60927.t1 AT2G23000 27.064 436 251 14 38 428 24 437 1.58e-41 153
MS.gene60927.t1 AT2G23000 27.064 436 251 14 38 428 24 437 1.58e-41 153
MS.gene60927.t1 AT2G22990 26.603 421 261 13 38 428 22 424 2.20e-41 152
MS.gene60927.t1 AT2G22990 26.279 430 260 13 38 428 22 433 2.44e-41 152
MS.gene60927.t1 AT1G73280 27.610 431 251 12 38 428 32 441 2.97e-40 149
MS.gene60927.t1 AT3G56540 43.860 171 61 4 24 162 65 232 4.99e-40 144
MS.gene60927.t1 AT2G22970 26.606 436 257 13 34 428 20 433 2.84e-39 147
MS.gene60927.t1 AT2G22920 26.279 430 260 10 38 428 24 435 5.87e-39 145
MS.gene60927.t1 AT3G12203 27.442 430 248 12 40 428 10 416 5.01e-38 143
MS.gene60927.t1 AT2G23010 26.218 431 261 11 38 428 24 437 5.09e-38 143
MS.gene60927.t1 AT3G12203 27.442 430 248 12 40 428 31 437 6.97e-38 143
MS.gene60927.t1 AT1G73270 26.790 433 248 12 40 428 34 441 7.91e-38 143
MS.gene60927.t1 AT1G73270 26.790 433 248 12 40 428 34 441 8.88e-38 143
MS.gene60927.t1 AT2G23010 25.986 431 262 11 38 428 24 437 1.73e-37 142
MS.gene60927.t1 AT2G22990 26.420 405 242 12 38 403 22 409 2.67e-37 142
MS.gene60927.t1 AT2G22990 26.485 404 241 12 38 402 22 408 3.88e-37 140
MS.gene60927.t1 AT2G22970 26.157 432 257 12 34 424 20 430 1.64e-36 139
MS.gene60927.t1 AT3G10450 25.581 430 261 11 38 428 28 437 1.85e-36 139
MS.gene60927.t1 AT1G73290 26.570 414 246 10 31 405 22 416 1.91e-36 139
MS.gene60927.t1 AT2G22970 27.007 411 238 12 34 403 20 409 4.11e-36 137
MS.gene60927.t1 AT1G73300 25.116 430 263 10 38 428 32 441 4.67e-36 138
MS.gene60927.t1 AT1G73300 25.116 430 263 10 38 428 32 441 4.67e-36 138
MS.gene60927.t1 AT5G09640 26.869 428 239 14 40 405 28 443 2.10e-35 136
MS.gene60927.t1 AT2G22980 24.537 432 259 12 38 428 25 430 2.23e-35 136
MS.gene60927.t1 AT3G12240 26.620 432 254 12 38 428 27 436 9.19e-35 134
MS.gene60927.t1 AT3G12230 25.754 431 259 12 38 428 26 435 1.43e-34 134
MS.gene60927.t1 AT1G73310 25.581 430 261 11 38 428 32 441 2.07e-34 133
MS.gene60927.t1 AT3G12220 26.168 428 255 12 38 425 26 432 2.83e-34 133
MS.gene60927.t1 AT5G36180 25.116 430 263 10 38 428 32 441 3.09e-34 133
MS.gene60927.t1 AT3G12203 26.617 402 231 12 68 428 1 379 4.76e-33 128
MS.gene60927.t1 AT1G33540 24.831 443 267 12 42 428 32 464 5.59e-33 130
MS.gene60927.t1 AT2G22920 26.478 389 231 8 38 388 24 395 1.48e-32 127
MS.gene60927.t1 AT3G10410 26.841 421 231 13 53 423 99 492 4.56e-32 128
MS.gene60927.t1 AT3G10450 25.679 405 243 10 38 403 28 413 4.63e-32 126
MS.gene60927.t1 AT2G22980 24.570 407 241 11 38 403 25 406 4.74e-32 126
MS.gene60927.t1 AT2G22980 23.981 417 251 11 38 413 25 416 1.23e-31 125
MS.gene60927.t1 AT3G12220 25.672 409 243 12 57 425 15 402 2.47e-31 124
MS.gene60927.t1 AT1G33540 24.533 428 257 12 57 428 4 421 3.87e-31 124
MS.gene60927.t1 AT5G22980 24.880 418 251 13 51 425 96 493 4.84e-31 125
MS.gene60927.t1 AT3G45010 25.986 431 243 16 51 430 99 504 2.13e-30 123
MS.gene60927.t1 AT1G73290 25.253 396 239 9 31 388 22 398 2.70e-30 121
MS.gene60927.t1 AT1G73310 25.313 399 241 9 38 398 32 411 1.96e-29 119
MS.gene60927.t1 AT1G73280 30.798 263 142 5 38 262 32 292 9.98e-28 114
MS.gene60927.t1 AT2G22990 25.753 299 202 9 134 428 37 319 1.35e-27 112
MS.gene60927.t1 AT2G22990 25.418 299 203 9 134 428 37 319 5.15e-27 110
MS.gene60927.t1 AT2G22970 29.213 267 144 7 34 260 20 281 2.02e-26 108
MS.gene60927.t1 AT2G22920 29.885 261 143 5 38 260 24 282 2.94e-26 108
MS.gene60927.t1 AT1G73290 28.358 268 152 5 31 260 22 287 1.10e-25 106
MS.gene60927.t1 AT1G73280 26.087 299 198 8 134 428 35 314 5.96e-25 104
MS.gene60927.t1 AT1G73280 26.087 299 198 8 134 428 60 339 1.05e-24 104
MS.gene60927.t1 AT2G22980 28.897 263 140 7 38 260 25 280 2.74e-24 103
MS.gene60927.t1 AT5G36180 23.490 298 207 6 134 428 60 339 3.78e-20 91.7
MS.gene60927.t1 AT5G36180 23.490 298 207 6 134 428 60 339 3.78e-20 91.7
MS.gene60927.t1 AT3G12220 28.112 249 135 7 38 248 26 268 8.75e-20 91.3
MS.gene60927.t1 AT2G22980 22.909 275 184 7 134 403 38 289 3.16e-19 88.2
MS.gene60927.t1 AT5G36180 23.443 273 189 5 134 403 60 315 4.77e-17 82.0
MS.gene60927.t1 AT1G73310 23.596 267 185 5 134 398 60 309 1.17e-15 78.2
MS.gene60927.t1 AT5G36180 22.680 291 194 6 134 410 60 333 1.36e-14 75.1
MS.gene60927.t1 AT5G22960 31.034 145 83 4 53 184 34 174 1.46e-13 69.3

Find 103 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTACTGGTCTGCGAATA+TGG 0.221283 2.4:-30983201 MS.gene60927:CDS
GGTTGTTCTTCTATTGCTTA+TGG 0.228301 2.4:-30988064 MS.gene60927:CDS
TCACCTTGATTCCAAGAATA+AGG 0.266471 2.4:+30987980 None:intergenic
TATAAATTTCAAAGGTTTCA+TGG 0.284809 2.4:-30986578 MS.gene60927:intron
GATCAACATGTAGAATCTTT+TGG 0.295617 2.4:+30983677 None:intergenic
TCCTGTCCTTGTTGGACAAA+TGG 0.319796 2.4:+30988259 None:intergenic
GTCTGCGAATATGGATATTC+AGG 0.330589 2.4:-30983192 MS.gene60927:intron
ATCAATGTTAGAGCAAGTTT+TGG 0.347763 2.4:+30982768 None:intergenic
CAATCTTGTCCTGTCCTTGT+TGG 0.353304 2.4:+30988251 None:intergenic
GTGGACAAATGGTATGATTT+CGG 0.356676 2.4:-30986380 MS.gene60927:CDS
GGAAATTGCTGATAAAGAAA+TGG 0.365053 2.4:-30986278 MS.gene60927:CDS
TATATGTCGAGTACTGTTCT+AGG 0.371006 2.4:+30983235 None:intergenic
ATGTGAGTCCAGCATATTCC+TGG 0.371274 2.4:+30982835 None:intergenic
AAGAATAAGGATTAAAATGA+AGG 0.376238 2.4:+30987993 None:intergenic
AATCCTTATTCTTGGAATCA+AGG 0.389072 2.4:-30987983 MS.gene60927:intron
GACTCACATTTGTAAATGTA+AGG 0.390540 2.4:-30982821 MS.gene60927:CDS
TATGGTGAAGCTGAGGAAAT+TGG 0.416971 2.4:-30988046 MS.gene60927:CDS
CGAAAATCCCCAACTGATCA+TGG 0.422919 2.4:+30986410 None:intergenic
AATTTGAGACCACTTAGAAT+TGG 0.422960 2.4:+30988339 None:intergenic
TTATGGTTTAATGGTGGTCC+TGG 0.423998 2.4:-30988085 MS.gene60927:CDS
ACAGTCCTGTGAAAGGATCT+TGG 0.426722 2.4:-30986299 MS.gene60927:CDS
TTGCAATGTTACATTGGAAA+AGG 0.427155 2.4:+30988287 None:intergenic
TTCGAGTTTATGTGGACAAA+TGG 0.440512 2.4:-30986391 MS.gene60927:CDS
GCACTGTGGTAAACACAAAC+TGG 0.445189 2.4:-30983267 MS.gene60927:CDS
CCGTGAGCCCCTGGCGTGCA+TGG 0.445833 2.4:-30982987 MS.gene60927:CDS
TTGATCAAAGCCTTCTTAGC+AGG 0.446957 2.4:-30982750 MS.gene60927:CDS
AGATCATAAGCCTGCTGAAT+GGG 0.448872 2.4:-30983653 MS.gene60927:CDS
GTATAGCGAGTAGATGTTAC+CGG 0.448892 2.4:+30983033 None:intergenic
TTTGTAAATGTAAGGGGTGC+CGG 0.449709 2.4:-30982813 MS.gene60927:CDS
GACGATTTCCATGATCAGTT+GGG 0.450265 2.4:-30986418 MS.gene60927:CDS
CATTCAGCAGGCTTATGATC+TGG 0.453021 2.4:+30983655 None:intergenic
CCATCAGAATTAATATGAAA+AGG 0.455112 2.4:+30988022 None:intergenic
CATGGAGGCTCCTGCTAAGA+AGG 0.455960 2.4:+30982740 None:intergenic
GAAATTGCTGATAAAGAAAT+GGG 0.456645 2.4:-30986277 MS.gene60927:CDS
AGCTTCCAACCGTGAGCCCC+TGG 0.456902 2.4:-30982996 MS.gene60927:CDS
GGAGGAGTGAAGATACTGTA+TGG 0.468358 2.4:+30986244 None:intergenic
CTGCAGGTCTCCCATTCAGC+AGG 0.473733 2.4:+30983643 None:intergenic
TTGTAAATGTAAGGGGTGCC+GGG 0.475145 2.4:-30982812 MS.gene60927:CDS
ATCTCATATTTCTATTGAAG+TGG 0.479798 2.4:-30986808 MS.gene60927:CDS
GTCATCATACCATGCACGCC+AGG 0.480079 2.4:+30982978 None:intergenic
AAAAGAAGTGGTTTAGAAGT+AGG 0.480423 2.4:+30988106 None:intergenic
CACAATTCTATAAATTTCAA+AGG 0.480437 2.4:-30986586 MS.gene60927:CDS
GGCGTGCATGGTATGATGAC+GGG 0.482407 2.4:-30982975 MS.gene60927:CDS
AAGATTGGTAGAGCACTTCC+AGG 0.484784 2.4:-30988235 MS.gene60927:CDS
ATCAGCGGTGAGAGCTATGC+AGG 0.488144 2.4:-30986746 MS.gene60927:intron
GCACGCCAGGGGCTCACGGT+TGG 0.497915 2.4:+30982991 None:intergenic
CTGCTGAATGGGAGACCTGC+AGG 0.498633 2.4:-30983642 MS.gene60927:intron
GCGGTGAGTGGTTCAAGAGT+TGG 0.505258 2.4:+30982717 None:intergenic
GTTCATTGTCATCATAACAT+TGG 0.506268 2.4:-30988314 MS.gene60927:CDS
AGTTGTACTTGACAATAACT+TGG 0.508533 2.4:+30986620 None:intergenic
ACCATTTGTCCAACAAGGAC+AGG 0.509689 2.4:-30988260 MS.gene60927:CDS
AGACGATTTCCATGATCAGT+TGG 0.510824 2.4:-30986419 MS.gene60927:CDS
CAACAAGGACAGGACAAGAT+TGG 0.511283 2.4:-30988250 MS.gene60927:CDS
TATCGTGAACTTATTCCTAC+TGG 0.513639 2.4:-30983214 MS.gene60927:CDS
AATTTCCAAGATCCTTTCAC+AGG 0.515552 2.4:+30986294 None:intergenic
ATGCAGAGGAACTTCGTGCC+CGG 0.535120 2.4:+30982794 None:intergenic
GGATGGACCCAGGAATATGC+TGG 0.548357 2.4:-30982843 MS.gene60927:CDS
GTTCTGTTGCAATGTTACAT+TGG 0.557162 2.4:+30988281 None:intergenic
CCATGCTAATGATAATCAGC+AGG 0.558448 2.4:-30986218 MS.gene60927:CDS
TAATACAGATGCGGTAATCC+CGG 0.560059 2.4:-30983052 MS.gene60927:CDS
TGGTTATATAACAGTGAATG+AGG 0.560384 2.4:-30988179 MS.gene60927:CDS
ACTCACATTTGTAAATGTAA+GGG 0.565991 2.4:-30982820 MS.gene60927:CDS
CAGATCATAAGCCTGCTGAA+TGG 0.568427 2.4:-30983654 MS.gene60927:CDS
CCATTAAACCATAAAAGAAG+TGG 0.570361 2.4:+30988094 None:intergenic
GAGTGGTTCAAGAGTTGGCA+TGG 0.570776 2.4:+30982722 None:intergenic
TCATCATACCATGCACGCCA+GGG 0.573326 2.4:+30982979 None:intergenic
GATCAAGAGGCGGCGGTGAG+TGG 0.576418 2.4:+30982705 None:intergenic
ATAACAGTGAATGAGGATGT+TGG 0.577186 2.4:-30988172 MS.gene60927:CDS
TGGCGTGCATGGTATGATGA+CGG 0.579941 2.4:-30982976 MS.gene60927:CDS
CTGAAATGGCCAATTCTAAG+TGG 0.580786 2.4:-30988348 None:intergenic
ACAATAACTTGGCTAAGTTG+AGG 0.581298 2.4:+30986631 None:intergenic
ACGATTTCCATGATCAGTTG+GGG 0.582348 2.4:-30986417 MS.gene60927:CDS
CCATGCACGCCAGGGGCTCA+CGG 0.583994 2.4:+30982987 None:intergenic
ATCCTTCACAGTCCTGTGAA+AGG 0.584239 2.4:-30986306 MS.gene60927:CDS
TCTTTCATGTAACAGAGTGT+TGG 0.584932 2.4:-30983769 MS.gene60927:intron
CCTGCTGATTATCATTAGCA+TGG 0.591913 2.4:+30986218 None:intergenic
GAAACAATCAGGTAGGAGGA+TGG 0.593228 2.4:-30982860 MS.gene60927:intron
AAGTGAAACAATCAGGTAGG+AGG 0.598460 2.4:-30982864 MS.gene60927:intron
CTCACATTTGTAAATGTAAG+GGG 0.598581 2.4:-30982819 MS.gene60927:CDS
CAGTGAATGAGGATGTTGGT+AGG 0.604941 2.4:-30988168 MS.gene60927:CDS
GAGGAGTGAAGATACTGTAT+GGG 0.606990 2.4:+30986245 None:intergenic
ATCCTTTCACAGGACTGTGA+AGG 0.607993 2.4:+30986304 None:intergenic
ACAACCATAACTTGATCAAG+AGG 0.621399 2.4:+30982692 None:intergenic
TGTGAGTCCAGCATATTCCT+GGG 0.621910 2.4:+30982836 None:intergenic
TATTGCTTATGGTGAAGCTG+AGG 0.624002 2.4:-30988053 MS.gene60927:CDS
TGATTATCATTAGCATGGCA+AGG 0.625509 2.4:+30986223 None:intergenic
ATCCATATTCGCAGACCAGT+AGG 0.627927 2.4:+30983199 None:intergenic
GCGTGCATGGTATGATGACG+GGG 0.628891 2.4:-30982974 MS.gene60927:CDS
ATAACTTGATCAAGAGGCGG+CGG 0.630274 2.4:+30982698 None:intergenic
TATAGCGAGTAGATGTTACC+GGG 0.637459 2.4:+30983034 None:intergenic
TGTGGTAAACACAAACTGGA+AGG 0.642909 2.4:-30983263 MS.gene60927:CDS
CATCATACCATGCACGCCAG+GGG 0.654327 2.4:+30982980 None:intergenic
TCAGGTAGGAGGATGGACCC+AGG 0.660838 2.4:-30982853 MS.gene60927:intron
TGCCAGTGGTAATACAGATG+CGG 0.670172 2.4:-30983061 MS.gene60927:intron
CAGAGTGTTGGAAGACTCAG+AGG 0.672935 2.4:-30983757 MS.gene60927:CDS
ACCATAACTTGATCAAGAGG+CGG 0.676966 2.4:+30982695 None:intergenic
ACAGAACCATTTGTCCAACA+AGG 0.681679 2.4:-30988265 MS.gene60927:CDS
TGGTTCAAGAGTTGGCATGG+AGG 0.692088 2.4:+30982725 None:intergenic
TCTCATTCATTGCAGCACTG+TGG 0.693510 2.4:-30983281 MS.gene60927:intron
TATATACTTCAATCGACCAG+AGG 0.714316 2.4:-30983701 MS.gene60927:CDS
TGCATGGTATGATGACGGGG+AGG 0.715312 2.4:-30982971 MS.gene60927:intron
TAAGCAATAGAAGAACAACC+AGG 0.719081 2.4:+30988067 None:intergenic
TTATCATTAGCATGGCAAGG+AGG 0.764262 2.4:+30986226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCCAATAAAAATAAAG+AGG - chr2.4:30986158-30986177 MS.gene60927:intron 15.0%
!! ATTTAAAGATGATCTAATAA+AGG + chr2.4:30983565-30983584 None:intergenic 15.0%
!! TTAAAAACATGAAAGAAATA+TGG + chr2.4:30987719-30987738 None:intergenic 15.0%
!!! TCTATTTTTCAATGTTAAAA+AGG + chr2.4:30987477-30987496 None:intergenic 15.0%
!!! TGATTTTATTTTTTTTACCA+GGG + chr2.4:30983388-30983407 None:intergenic 15.0%
!!! TTTAGTTCAATAAATTTATC+TGG + chr2.4:30986279-30986298 None:intergenic 15.0%
!! AAGAATAAGGATTAAAATGA+AGG + chr2.4:30983060-30983079 None:intergenic 20.0%
!! ATAATTATTGATGTTTGTGT+AGG + chr2.4:30984897-30984916 None:intergenic 20.0%
!! CACAATTCTATAAATTTCAA+AGG - chr2.4:30984464-30984483 MS.gene60927:intron 20.0%
!! GATAGTTAAAAAGTAATAGA+AGG - chr2.4:30986708-30986727 MS.gene60927:intron 20.0%
!! TAAAAAGTAATAGAAGGAAT+GGG - chr2.4:30986714-30986733 MS.gene60927:intron 20.0%
!! TATAAATTTCAAAGGTTTCA+TGG - chr2.4:30984472-30984491 MS.gene60927:intron 20.0%
!! TGAGTCAATATAAAGAATAT+TGG + chr2.4:30983172-30983191 None:intergenic 20.0%
!! TTAAAAAGTAATAGAAGGAA+TGG - chr2.4:30986713-30986732 MS.gene60927:intron 20.0%
!! TTTCAATCACAAATTAGTAT+CGG - chr2.4:30985579-30985598 MS.gene60927:intron 20.0%
!!! AATACATAACTCTTCTTTTT+CGG - chr2.4:30985313-30985332 MS.gene60927:intron 20.0%
!!! AATCTATATAGAGAAGTTTT+AGG - chr2.4:30986551-30986570 MS.gene60927:intron 20.0%
!!! AGAATTATCTAAAATCTTCA+TGG - chr2.4:30985236-30985255 MS.gene60927:intron 20.0%
!!! ATTTGTGTTTTTGTTTTTTG+TGG - chr2.4:30983143-30983162 MS.gene60927:intron 20.0%
!!! ATTTTTCAATGTTAAAAAGG+TGG + chr2.4:30987474-30987493 None:intergenic 20.0%
!!! CTGATTTTATTTTTTTTACC+AGG + chr2.4:30983389-30983408 None:intergenic 20.0%
!!! TCTATTACTTTTTAACTATC+TGG + chr2.4:30986708-30986727 None:intergenic 20.0%
!!! TGTGATTGAAAATTAATTTG+AGG + chr2.4:30985570-30985589 None:intergenic 20.0%
!!! TTCATTTTAATCCTTATTCT+TGG - chr2.4:30983059-30983078 MS.gene60927:intron 20.0%
! AAAAAGTAATAGAAGGAATG+GGG - chr2.4:30986715-30986734 MS.gene60927:intron 25.0%
! AAAAGAAGAGTTATGTATTG+TGG + chr2.4:30985312-30985331 None:intergenic 25.0%
! AAAGGATTCTTACTCTTAAT+AGG - chr2.4:30983667-30983686 MS.gene60927:CDS 25.0%
! ACTCACATTTGTAAATGTAA+GGG - chr2.4:30988230-30988249 MS.gene60927:CDS 25.0%
! AGTATTTGCAAAACAGAAAA+AGG + chr2.4:30985987-30986006 None:intergenic 25.0%
! ATTTGACATTGAAATTACCA+TGG + chr2.4:30985676-30985695 None:intergenic 25.0%
! CCATCAGAATTAATATGAAA+AGG + chr2.4:30983031-30983050 None:intergenic 25.0%
! GAAATTGCTGATAAAGAAAT+GGG - chr2.4:30984773-30984792 MS.gene60927:intron 25.0%
! GATGTAAAGTAATATATGCT+TGG - chr2.4:30983895-30983914 MS.gene60927:intron 25.0%
! TAACTTAGTATCATATGCAA+AGG + chr2.4:30987607-30987626 None:intergenic 25.0%
! TCAGTTATGAAGTTAAACAA+AGG - chr2.4:30983649-30983668 MS.gene60927:CDS 25.0%
!! AATAATTTTATGCTCCAAAG+AGG - chr2.4:30987928-30987947 MS.gene60927:intron 25.0%
!! ATACATAACTCTTCTTTTTC+GGG - chr2.4:30985314-30985333 MS.gene60927:intron 25.0%
!! ATCTCATATTTCTATTGAAG+TGG - chr2.4:30984242-30984261 MS.gene60927:intron 25.0%
!! CCTTTTCATATTAATTCTGA+TGG - chr2.4:30983028-30983047 MS.gene60927:CDS 25.0%
!! TTTCTGTTTTGCAAATACTT+TGG - chr2.4:30985988-30986007 MS.gene60927:intron 25.0%
!!! AAGTCTGTTTTTTTGTATTG+TGG + chr2.4:30984280-30984299 None:intergenic 25.0%
!!! AATTCCCTTTTTAAGTTGTT+CGG + chr2.4:30986908-30986927 None:intergenic 25.0%
!!! ACTAACAAGGTTTTAAGTAA+TGG + chr2.4:30985811-30985830 None:intergenic 25.0%
!!! AGACTCCTCTTTATTTTTAT+TGG + chr2.4:30986166-30986185 None:intergenic 25.0%
!!! ATCAGTTTTGAACATTATTC+TGG - chr2.4:30982851-30982870 MS.gene60927:CDS 25.0%
!!! GATTTTAGTTAAAATTCAGC+TGG - chr2.4:30983873-30983892 MS.gene60927:intron 25.0%
!!! TAAATTTCAAGTTAACCATC+AGG - chr2.4:30985893-30985912 MS.gene60927:intron 25.0%
!!! TAATCTATACCTTTGATTTG+TGG - chr2.4:30983584-30983603 MS.gene60927:intron 25.0%
!!! TTATTTTTTTTACCAGGGAT+GGG + chr2.4:30983383-30983402 None:intergenic 25.0%
!!! TTTATTTTTTTTACCAGGGA+TGG + chr2.4:30983384-30983403 None:intergenic 25.0%
AAAAGAAGTGGTTTAGAAGT+AGG + chr2.4:30982947-30982966 None:intergenic 30.0%
AAGGTACAAGTATCTAGATA+AGG + chr2.4:30986976-30986995 None:intergenic 30.0%
AATCCTTATTCTTGGAATCA+AGG - chr2.4:30983067-30983086 MS.gene60927:intron 30.0%
AATGAAAAGTTGCAAGTGAT+TGG + chr2.4:30985200-30985219 None:intergenic 30.0%
ACTAATTTCAGAGGATGTAA+AGG - chr2.4:30985618-30985637 MS.gene60927:intron 30.0%
AGTTGTACTTGACAATAACT+TGG + chr2.4:30984433-30984452 None:intergenic 30.0%
AGTTGTATACAAACAAAACC+AGG + chr2.4:30985042-30985061 None:intergenic 30.0%
ATTTAACAATGCAACGAAAG+AGG + chr2.4:30985878-30985897 None:intergenic 30.0%
CAATTTGACTAACACTAACA+AGG + chr2.4:30985824-30985843 None:intergenic 30.0%
CAGGAGTTTCATAAAAGATA+TGG + chr2.4:30986419-30986438 None:intergenic 30.0%
CATTCCGAACAACTTAAAAA+GGG - chr2.4:30986901-30986920 MS.gene60927:intron 30.0%
CCATTAAACCATAAAAGAAG+TGG + chr2.4:30982959-30982978 None:intergenic 30.0%
CTCACATTTGTAAATGTAAG+GGG - chr2.4:30988231-30988250 MS.gene60927:CDS 30.0%
GACTCACATTTGTAAATGTA+AGG - chr2.4:30988229-30988248 MS.gene60927:CDS 30.0%
GATATCTAAGTGAAACAATC+AGG - chr2.4:30988179-30988198 MS.gene60927:CDS 30.0%
GATATTACGTAGTGACTTTA+GGG - chr2.4:30987666-30987685 MS.gene60927:intron 30.0%
GGAAATTGCTGATAAAGAAA+TGG - chr2.4:30984772-30984791 MS.gene60927:intron 30.0%
GTTCATTGTCATCATAACAT+TGG - chr2.4:30982736-30982755 MS.gene60927:CDS 30.0%
TACAAGTATCTAGATAAGGA+AGG + chr2.4:30986972-30986991 None:intergenic 30.0%
TCAAAGATCCTAATTATGGT+GGG - chr2.4:30983488-30983507 MS.gene60927:intron 30.0%
TCATTCCGAACAACTTAAAA+AGG - chr2.4:30986900-30986919 MS.gene60927:intron 30.0%
TGACAAAACAAAAACCAACT+CGG - chr2.4:30987499-30987518 MS.gene60927:intron 30.0%
TGATATTACGTAGTGACTTT+AGG - chr2.4:30987665-30987684 MS.gene60927:intron 30.0%
TGGTTATATAACAGTGAATG+AGG - chr2.4:30982871-30982890 MS.gene60927:intron 30.0%
TTGCAATGTTACATTGGAAA+AGG + chr2.4:30982766-30982785 None:intergenic 30.0%
TTTAACAATGCAACGAAAGA+GGG + chr2.4:30985877-30985896 None:intergenic 30.0%
TTTATACGATCACAGTTTAG+AGG - chr2.4:30986304-30986323 MS.gene60927:CDS 30.0%
! AAATTAGTATTGGATCCTCA+AGG + chr2.4:30985606-30985625 None:intergenic 30.0%
! AACTCGTAGTTTAGAGTAAA+AGG + chr2.4:30985156-30985175 None:intergenic 30.0%
! AATTTGAGACCACTTAGAAT+TGG + chr2.4:30982714-30982733 None:intergenic 30.0%
! ATAGGCTTATTGACTGTTTA+CGG + chr2.4:30986351-30986370 None:intergenic 30.0%
! ATCAATGTTAGAGCAAGTTT+TGG + chr2.4:30988285-30988304 None:intergenic 30.0%
! ATGAAAGAGCATATGAATGA+GGG + chr2.4:30987269-30987288 None:intergenic 30.0%
! CATATCTTTTATGAAACTCC+TGG - chr2.4:30986417-30986436 MS.gene60927:CDS 30.0%
! CCACTTCTTTTATGGTTTAA+TGG - chr2.4:30982956-30982975 MS.gene60927:intron 30.0%
! CTGTAAGAAAAGTACAACAA+CGG + chr2.4:30987580-30987599 None:intergenic 30.0%
! CTTCTAAACCACTTCTTTTA+TGG - chr2.4:30982948-30982967 MS.gene60927:intron 30.0%
! CTTCTTTTATGGTTTAATGG+TGG - chr2.4:30982959-30982978 MS.gene60927:intron 30.0%
! GATCAACATGTAGAATCTTT+TGG + chr2.4:30987376-30987395 None:intergenic 30.0%
! TAAATAAGGTGTCACACATT+TGG - chr2.4:30983622-30983641 MS.gene60927:intron 30.0%
! TGTGACACCTTATTTAATCT+TGG + chr2.4:30983618-30983637 None:intergenic 30.0%
!! AATGAATGATGTGTTGATTC+TGG + chr2.4:30985356-30985375 None:intergenic 30.0%
!! ACATCCTCTGAAATTAGTAT+TGG + chr2.4:30985616-30985635 None:intergenic 30.0%
!! GTGTTTGAGTTCTCTAATTT+TGG - chr2.4:30984370-30984389 MS.gene60927:intron 30.0%
!! GTTATATTGGTGCTTTTGTT+GGG - chr2.4:30983732-30983751 MS.gene60927:CDS 30.0%
!!! AAAACAGACTTTTTCATCAG+CGG - chr2.4:30984289-30984308 MS.gene60927:intron 30.0%
!!! ACAAGGTTTTAAGTAATGGA+AGG + chr2.4:30985807-30985826 None:intergenic 30.0%
!!! ATTTTGGTTTTCCTTGTTTC+AGG - chr2.4:30984386-30984405 MS.gene60927:intron 30.0%
!!! GGTTTTGTTTGTATACAACT+AGG - chr2.4:30985042-30985061 MS.gene60927:intron 30.0%
!!! TTGGTAGGAATTTGTTTTAC+TGG - chr2.4:30982897-30982916 MS.gene60927:intron 30.0%
AAAAACAGTGTAAGCCTCTT+TGG + chr2.4:30987945-30987964 None:intergenic 35.0%
AAAGGAACTGGATTCGTAAA+TGG + chr2.4:30985384-30985403 None:intergenic 35.0%
AAGATATGGCTGTGATTACT+CGG + chr2.4:30986405-30986424 None:intergenic 35.0%
AAGGTACATAAGAAGCTGAA+AGG + chr2.4:30986015-30986034 None:intergenic 35.0%
AATTTCCAAGATCCTTTCAC+AGG + chr2.4:30984759-30984778 None:intergenic 35.0%
ACAATAACTTGGCTAAGTTG+AGG + chr2.4:30984422-30984441 None:intergenic 35.0%
AGCTGGAATTTCTACTATTG+TGG + chr2.4:30987179-30987198 None:intergenic 35.0%
AGGATTAAGGAAAAACCAGA+TGG + chr2.4:30986470-30986489 None:intergenic 35.0%
ATAACAGTGAATGAGGATGT+TGG - chr2.4:30982878-30982897 MS.gene60927:intron 35.0%
ATCTATTAAGAGAGGAGACA+TGG - chr2.4:30985647-30985666 MS.gene60927:intron 35.0%
ATGCTTAACCACTAATGTGA+AGG - chr2.4:30986369-30986388 MS.gene60927:CDS 35.0%
CACAAATGGTGAGATAGATA+AGG - chr2.4:30984331-30984350 MS.gene60927:intron 35.0%
CAGACGACCAAGATTAAATA+AGG - chr2.4:30983608-30983627 MS.gene60927:intron 35.0%
CATGAGAATTCGTTTCAGTA+TGG - chr2.4:30985778-30985797 MS.gene60927:intron 35.0%
GAACATAATGTCCTGAAACA+AGG + chr2.4:30984400-30984419 None:intergenic 35.0%
GAACGTGTGAAAGTTTCAAT+TGG + chr2.4:30986110-30986129 None:intergenic 35.0%
GAATTCTCATGAGGTATGAA+CGG + chr2.4:30985769-30985788 None:intergenic 35.0%
GATCATACCAACTTTGTGTT+GGG - chr2.4:30983342-30983361 MS.gene60927:intron 35.0%
GCAATGAATGAGAGAATAAG+TGG + chr2.4:30987762-30987781 None:intergenic 35.0%
GCTACATAGATAGAGTACAT+GGG - chr2.4:30985010-30985029 MS.gene60927:intron 35.0%
GGATCCAATACTAATTTCAG+AGG - chr2.4:30985609-30985628 MS.gene60927:intron 35.0%
GGCTAATACTCTCGTTATAT+TGG - chr2.4:30983719-30983738 MS.gene60927:CDS 35.0%
GGTTGTTCTTCTATTGCTTA+TGG - chr2.4:30982986-30983005 MS.gene60927:CDS 35.0%
GTAAAAGGAAGCTCAGTAAT+TGG + chr2.4:30985141-30985160 None:intergenic 35.0%
GTATGCCATAGGGAAAAAAT+TGG + chr2.4:30986074-30986093 None:intergenic 35.0%
GTCAAAGATCCTAATTATGG+TGG - chr2.4:30983487-30983506 MS.gene60927:intron 35.0%
GTGGACAAATGGTATGATTT+CGG - chr2.4:30984670-30984689 MS.gene60927:intron 35.0%
GTGTGAAAGTTTCAATTGGA+TGG + chr2.4:30986106-30986125 None:intergenic 35.0%
GTTCTGTTGCAATGTTACAT+TGG + chr2.4:30982772-30982791 None:intergenic 35.0%
TAAGCAATAGAAGAACAACC+AGG + chr2.4:30982986-30983005 None:intergenic 35.0%
TAATTCTTTATGTGCAGCTG+AGG - chr2.4:30984216-30984235 MS.gene60927:intron 35.0%
TACTGAAACGAATTCTCATG+AGG + chr2.4:30985778-30985797 None:intergenic 35.0%
TAGTTAGAATAACACCGTGA+GGG - chr2.4:30986742-30986761 MS.gene60927:intron 35.0%
TATATACTTCAATCGACCAG+AGG - chr2.4:30987349-30987368 MS.gene60927:intron 35.0%
TATCGTGAACTTATTCCTAC+TGG - chr2.4:30987836-30987855 MS.gene60927:intron 35.0%
TATGAAAATCCAACTCCAAC+AGG + chr2.4:30983195-30983214 None:intergenic 35.0%
TCACATTAGTGGTTAAGCAT+AGG + chr2.4:30986369-30986388 None:intergenic 35.0%
TCACCTTGATTCCAAGAATA+AGG + chr2.4:30983073-30983092 None:intergenic 35.0%
TCTAAGTGAAACAATCAGGT+AGG - chr2.4:30988183-30988202 MS.gene60927:CDS 35.0%
TCTATCGAATGTACCTTACT+TGG + chr2.4:30987017-30987036 None:intergenic 35.0%
TCTGATGACATTCTCAACAA+CGG - chr2.4:30983231-30983250 MS.gene60927:CDS 35.0%
TCTTAACCCTTGAAAACTGT+CGG - chr2.4:30986832-30986851 MS.gene60927:intron 35.0%
TCTTTCATGTAACAGAGTGT+TGG - chr2.4:30987281-30987300 MS.gene60927:intron 35.0%
TGATCATACCAACTTTGTGT+TGG - chr2.4:30983341-30983360 MS.gene60927:intron 35.0%
TGATTATCATTAGCATGGCA+AGG + chr2.4:30984830-30984849 None:intergenic 35.0%
TGCTACATAGATAGAGTACA+TGG - chr2.4:30985009-30985028 MS.gene60927:intron 35.0%
TTACTCTTAACTGTTACCAG+AGG - chr2.4:30985699-30985718 MS.gene60927:intron 35.0%
! AAGCATGAAATCACGTTTTC+AGG - chr2.4:30983954-30983973 MS.gene60927:intron 35.0%
! AGATTATCCGACAGTTTTCA+AGG + chr2.4:30986842-30986861 None:intergenic 35.0%
! AGTGGTTTGAGTTAGATTCA+GGG + chr2.4:30985476-30985495 None:intergenic 35.0%
! CATGAAAGAGCATATGAATG+AGG + chr2.4:30987270-30987289 None:intergenic 35.0%
! CCAAAACAACTAGTCTGTTA+GGG + chr2.4:30984134-30984153 None:intergenic 35.0%
! CTTTGAAAGAATTGACCAGA+GGG - chr2.4:30983765-30983784 MS.gene60927:intron 35.0%
! GATTATCCGACAGTTTTCAA+GGG + chr2.4:30986841-30986860 None:intergenic 35.0%
! GTATATAGTGCTGTGCTTTT+CGG + chr2.4:30987336-30987355 None:intergenic 35.0%
! TATATGTCGAGTACTGTTCT+AGG + chr2.4:30987818-30987837 None:intergenic 35.0%
! TCCAAAACAACTAGTCTGTT+AGG + chr2.4:30984135-30984154 None:intergenic 35.0%
! TCTTTGAAAGAATTGACCAG+AGG - chr2.4:30983764-30983783 MS.gene60927:intron 35.0%
! TTATTTGTGTGTTGCTCATG+AGG + chr2.4:30985427-30985446 None:intergenic 35.0%
! TTCGAGTTTATGTGGACAAA+TGG - chr2.4:30984659-30984678 MS.gene60927:intron 35.0%
! TTGTTCGGAATGATTTTCCT+TGG + chr2.4:30986893-30986912 None:intergenic 35.0%
! TTTTGGATGAGCTCTCTTAT+TGG - chr2.4:30984148-30984167 MS.gene60927:intron 35.0%
!! CGTTATATTGGTGCTTTTGT+TGG - chr2.4:30983731-30983750 MS.gene60927:CDS 35.0%
!! CTTTATATTGACTCACCTGT+TGG - chr2.4:30983177-30983196 MS.gene60927:intron 35.0%
!!! CACTTCCAATTTTTTCCCTA+TGG - chr2.4:30986066-30986085 MS.gene60927:intron 35.0%
!!! TTTTTTCCCTATGGCATACT+AGG - chr2.4:30986075-30986094 MS.gene60927:intron 35.0%
AAAGAGGAGTCTGTGTAACA+CGG - chr2.4:30986174-30986193 MS.gene60927:intron 40.0%
AACTCAAACCACTGCTTGTA+TGG - chr2.4:30985483-30985502 MS.gene60927:intron 40.0%
AACTTTGTGTTGGGAGAGTT+GGG - chr2.4:30983351-30983370 MS.gene60927:intron 40.0%
AAGTGAAACAATCAGGTAGG+AGG - chr2.4:30988186-30988205 MS.gene60927:CDS 40.0%
ACAGAACCATTTGTCCAACA+AGG - chr2.4:30982785-30982804 MS.gene60927:CDS 40.0%
ACCAGATGGTACAGTGAATA+AGG + chr2.4:30986456-30986475 None:intergenic 40.0%
ACGATCACAGTTTAGAGGAA+GGG - chr2.4:30986309-30986328 MS.gene60927:CDS 40.0%
ACGATTTCCATGATCAGTTG+GGG - chr2.4:30984633-30984652 MS.gene60927:intron 40.0%
AGACGATTTCCATGATCAGT+TGG - chr2.4:30984631-30984650 MS.gene60927:intron 40.0%
AGATCATAAGCCTGCTGAAT+GGG - chr2.4:30987397-30987416 MS.gene60927:intron 40.0%
AGGTGGAGAGACATTCTTAA+TGG - chr2.4:30986791-30986810 MS.gene60927:CDS 40.0%
ATTCATCTATGTCATGCCAG+TGG - chr2.4:30987975-30987994 MS.gene60927:intron 40.0%
CAAAACAAAAACCAACTCGG+AGG - chr2.4:30987502-30987521 MS.gene60927:intron 40.0%
CACATTAAGGGGGAAAACAA+AGG + chr2.4:30985402-30985421 None:intergenic 40.0%
CAGCTTATGAACAACAGCTA+TGG - chr2.4:30987194-30987213 MS.gene60927:intron 40.0%
CATAGCTGTTGTTCATAAGC+TGG + chr2.4:30987196-30987215 None:intergenic 40.0%
CATGCAATATTGCAACAACG+TGG - chr2.4:30984532-30984551 MS.gene60927:intron 40.0%
CCATGCTAATGATAATCAGC+AGG - chr2.4:30984832-30984851 MS.gene60927:intron 40.0%
CTACTATTGTGGATGCTTGT+GGG + chr2.4:30987168-30987187 None:intergenic 40.0%
CTGAATGTATCCTATGGCTT+GGG + chr2.4:30983455-30983474 None:intergenic 40.0%
GAAACAACTTGTGCAGTAGA+AGG - chr2.4:30986666-30986685 MS.gene60927:intron 40.0%
GACGATTTCCATGATCAGTT+GGG - chr2.4:30984632-30984651 MS.gene60927:intron 40.0%
GAGAATTCGTTTCAGTATGG+TGG - chr2.4:30985781-30985800 MS.gene60927:intron 40.0%
GAGGAGTGAAGATACTGTAT+GGG + chr2.4:30984808-30984827 None:intergenic 40.0%
GCTATGCAGGTAAACACAAA+TGG - chr2.4:30984317-30984336 MS.gene60927:intron 40.0%
GGAGCAAGATCTATTAAGAG+AGG - chr2.4:30985639-30985658 MS.gene60927:intron 40.0%
GGGGTCAAAGATCCTAATTA+TGG - chr2.4:30983484-30983503 MS.gene60927:intron 40.0%
GTAGAAGGTTGACACAAAGA+CGG - chr2.4:30986681-30986700 MS.gene60927:intron 40.0%
GTAGGAAACCTTCACATTAG+TGG + chr2.4:30986380-30986399 None:intergenic 40.0%
GTAGTTAGAATAACACCGTG+AGG - chr2.4:30986741-30986760 MS.gene60927:intron 40.0%
GTATAGCGAGTAGATGTTAC+CGG + chr2.4:30988020-30988039 None:intergenic 40.0%
GTCTAACCTAGTATGCCATA+GGG + chr2.4:30986084-30986103 None:intergenic 40.0%
GTCTGCGAATATGGATATTC+AGG - chr2.4:30987858-30987877 MS.gene60927:intron 40.0%
GTGAATAAGGCAAGACTTGT+TGG + chr2.4:30986443-30986462 None:intergenic 40.0%
GTGTACAGTAACATCCTAAC+AGG + chr2.4:30986235-30986254 None:intergenic 40.0%
TAATACAGATGCGGTAATCC+CGG - chr2.4:30987998-30988017 MS.gene60927:CDS 40.0%
TACGATCACAGTTTAGAGGA+AGG - chr2.4:30986308-30986327 MS.gene60927:CDS 40.0%
TATAGCGAGTAGATGTTACC+GGG + chr2.4:30988019-30988038 None:intergenic 40.0%
TATGGTGAAGCTGAGGAAAT+TGG - chr2.4:30983004-30983023 MS.gene60927:CDS 40.0%
TATTGCTTATGGTGAAGCTG+AGG - chr2.4:30982997-30983016 MS.gene60927:CDS 40.0%
TCTACTATTGTGGATGCTTG+TGG + chr2.4:30987169-30987188 None:intergenic 40.0%
TGTGGTAAACACAAACTGGA+AGG - chr2.4:30987787-30987806 MS.gene60927:intron 40.0%
TGTGTGGAATAACAGTGTCA+GGG + chr2.4:30986048-30986067 None:intergenic 40.0%
TTATCATTAGCATGGCAAGG+AGG + chr2.4:30984827-30984846 None:intergenic 40.0%
TTATGACGAGTCCTCTGATT+TGG - chr2.4:30983698-30983717 MS.gene60927:CDS 40.0%
TTATGGTTTAATGGTGGTCC+TGG - chr2.4:30982965-30982984 MS.gene60927:intron 40.0%
TTGATCAAAGCCTTCTTAGC+AGG - chr2.4:30988300-30988319 MS.gene60927:CDS 40.0%
TTTCGTCACCCACCATAATT+AGG + chr2.4:30983499-30983518 None:intergenic 40.0%
! ACGCTTGGTTTCATTTTCGA+TGG + chr2.4:30984094-30984113 None:intergenic 40.0%
! AGAGTACATGGGTTATATCC+TGG - chr2.4:30985021-30985040 MS.gene60927:intron 40.0%
! ATAAGTAGAGCATTACCTGC+AGG + chr2.4:30987426-30987445 None:intergenic 40.0%
! ATTGCCGAAAACGTGTCATT+AGG - chr2.4:30984562-30984581 MS.gene60927:intron 40.0%
! CAAATTAGTATCGGACCTTG+AGG - chr2.4:30985588-30985607 MS.gene60927:intron 40.0%
! CAGTGGTTTGAGTTAGATTC+AGG + chr2.4:30985477-30985496 None:intergenic 40.0%
! CCTGCTGATTATCATTAGCA+TGG + chr2.4:30984835-30984854 None:intergenic 40.0%
! CTGAGAATTAGTCTCATAGC+AGG - chr2.4:30983420-30983439 MS.gene60927:intron 40.0%
! GGGAAAAAATTGGAAGTGTG+TGG + chr2.4:30986064-30986083 None:intergenic 40.0%
! GTAGTGACTTTAGGGATTGT+AGG - chr2.4:30987674-30987693 MS.gene60927:intron 40.0%
! TATGTATCTCTGTTTGCTGC+AGG - chr2.4:30984592-30984611 MS.gene60927:intron 40.0%
! TCTCCAATTAGGAGAAGCAT+CGG - chr2.4:30986504-30986523 MS.gene60927:intron 40.0%
! TGTAGAATCTTTTGGACCTC+TGG + chr2.4:30987368-30987387 None:intergenic 40.0%
! TTCCCCTAATGACACGTTTT+CGG + chr2.4:30984569-30984588 None:intergenic 40.0%
! TTGCCGAAAACGTGTCATTA+GGG - chr2.4:30984563-30984582 MS.gene60927:intron 40.0%
! TTTGTAAATGTAAGGGGTGC+CGG - chr2.4:30988237-30988256 MS.gene60927:CDS 40.0%
!! ATATTGGTGCTTTTGTTGGG+AGG - chr2.4:30983735-30983754 MS.gene60927:CDS 40.0%
!! CCCTAACAGACTAGTTGTTT+TGG - chr2.4:30984131-30984150 MS.gene60927:intron 40.0%
!! CTGATGTTGAAGTTTTGACC+TGG + chr2.4:30982836-30982855 None:intergenic 40.0%
!! GAGAGTATTAGCCAAATCAG+AGG + chr2.4:30983712-30983731 None:intergenic 40.0%
!!! GAAGTTTTAGGATTCCGTCA+AGG - chr2.4:30986563-30986582 MS.gene60927:intron 40.0%
!!! TGGGGATTTTCGAGTTTATG+TGG - chr2.4:30984651-30984670 MS.gene60927:intron 40.0%
AAGAGGAGTCTGTGTAACAC+GGG - chr2.4:30986175-30986194 MS.gene60927:intron 45.0%
AAGCCGATGCTTCTCCTAAT+TGG + chr2.4:30986510-30986529 None:intergenic 45.0%
AAGGGGGAAAACAAAGGAAC+TGG + chr2.4:30985396-30985415 None:intergenic 45.0%
AAGTACACTCAGTGGCTACT+TGG + chr2.4:30985520-30985539 None:intergenic 45.0%
ACAACTTCTTCTCCCTCTTC+TGG + chr2.4:30986605-30986624 None:intergenic 45.0%
ACAGTCCTGTGAAAGGATCT+TGG - chr2.4:30984751-30984770 MS.gene60927:intron 45.0%
ACCATTTGTCCAACAAGGAC+AGG - chr2.4:30982790-30982809 MS.gene60927:CDS 45.0%
AGACGCCTGAATGTATCCTA+TGG + chr2.4:30983461-30983480 None:intergenic 45.0%
ATACATTCAGGCGTCTACTG+GGG - chr2.4:30983465-30983484 MS.gene60927:intron 45.0%
ATCCATATTCGCAGACCAGT+AGG + chr2.4:30987854-30987873 None:intergenic 45.0%
ATCCTTCACAGTCCTGTGAA+AGG - chr2.4:30984744-30984763 MS.gene60927:intron 45.0%
ATCCTTTCACAGGACTGTGA+AGG + chr2.4:30984749-30984768 None:intergenic 45.0%
ATGTGAGTCCAGCATATTCC+TGG + chr2.4:30988218-30988237 None:intergenic 45.0%
CAAAAACAGCACTAGACGAG+TGG + chr2.4:30985961-30985980 None:intergenic 45.0%
CAACAAGGACAGGACAAGAT+TGG - chr2.4:30982800-30982819 MS.gene60927:CDS 45.0%
CAACTCTCCCAACACAAAGT+TGG + chr2.4:30983352-30983371 None:intergenic 45.0%
CAACTTCTTCTCCCTCTTCT+GGG + chr2.4:30986604-30986623 None:intergenic 45.0%
CAACTTTGTGTTGGGAGAGT+TGG - chr2.4:30983350-30983369 MS.gene60927:intron 45.0%
CAATCTTGTCCTGTCCTTGT+TGG + chr2.4:30982802-30982821 None:intergenic 45.0%
CACAGGAAGTTAAGCCTGTT+AGG - chr2.4:30986218-30986237 MS.gene60927:CDS 45.0%
CAGATCATAAGCCTGCTGAA+TGG - chr2.4:30987396-30987415 MS.gene60927:intron 45.0%
CAGTGAATGAGGATGTTGGT+AGG - chr2.4:30982882-30982901 MS.gene60927:intron 45.0%
CATTCAGCAGGCTTATGATC+TGG + chr2.4:30987398-30987417 None:intergenic 45.0%
CCAAGCCATAGGATACATTC+AGG - chr2.4:30983453-30983472 MS.gene60927:intron 45.0%
CCTGAATGTATCCTATGGCT+TGG + chr2.4:30983456-30983475 None:intergenic 45.0%
CGAAAATCCCCAACTGATCA+TGG + chr2.4:30984643-30984662 None:intergenic 45.0%
CTAAGGCATAAACTGCTGCT+GGG + chr2.4:30985746-30985765 None:intergenic 45.0%
CTCATGAGGCTCACATTAAG+GGG + chr2.4:30985413-30985432 None:intergenic 45.0%
GAAACAATCAGGTAGGAGGA+TGG - chr2.4:30988190-30988209 MS.gene60927:CDS 45.0%
GATACATTCAGGCGTCTACT+GGG - chr2.4:30983464-30983483 MS.gene60927:intron 45.0%
GCACTGTGGTAAACACAAAC+TGG - chr2.4:30987783-30987802 MS.gene60927:intron 45.0%
GCTCATGAGGCTCACATTAA+GGG + chr2.4:30985414-30985433 None:intergenic 45.0%
GGAACTGGATTCGTAAATGG+AGG + chr2.4:30985381-30985400 None:intergenic 45.0%
GGAGGAGTGAAGATACTGTA+TGG + chr2.4:30984809-30984828 None:intergenic 45.0%
GGTCTAACCTAGTATGCCAT+AGG + chr2.4:30986085-30986104 None:intergenic 45.0%
GTCGTCTGACCACAAATCAA+AGG + chr2.4:30983596-30983615 None:intergenic 45.0%
GTGGGTGACGAAAAATGTCT+TGG - chr2.4:30983506-30983525 MS.gene60927:intron 45.0%
GTGTGTGGAATAACAGTGTC+AGG + chr2.4:30986049-30986068 None:intergenic 45.0%
TAAGGCATAAACTGCTGCTG+GGG + chr2.4:30985745-30985764 None:intergenic 45.0%
TAATCTGATGCTGAGTAGCG+AGG - chr2.4:30986856-30986875 MS.gene60927:intron 45.0%
TACCGCATCTGTATTACCAC+TGG + chr2.4:30987994-30988013 None:intergenic 45.0%
TCACAGTTTAGAGGAAGGGT+AGG - chr2.4:30986313-30986332 MS.gene60927:CDS 45.0%
TCATGAGGCTCACATTAAGG+GGG + chr2.4:30985412-30985431 None:intergenic 45.0%
TCATGAGGTATGAACGGCTA+AGG + chr2.4:30985763-30985782 None:intergenic 45.0%
TCCTGTCCTTGTTGGACAAA+TGG + chr2.4:30982794-30982813 None:intergenic 45.0%
TCTCATTCATTGCAGCACTG+TGG - chr2.4:30987769-30987788 MS.gene60927:intron 45.0%
TGAACCTGAAGTACACTCAG+TGG + chr2.4:30985528-30985547 None:intergenic 45.0%
TGACTGTTTACGGTGGATCT+AGG + chr2.4:30986341-30986360 None:intergenic 45.0%
TGAGACTAATTCTCAGCAGC+AGG + chr2.4:30983416-30983435 None:intergenic 45.0%
TGCCAGTGGTAATACAGATG+CGG - chr2.4:30987989-30988008 MS.gene60927:CDS 45.0%
TGCTCATGAGGCTCACATTA+AGG + chr2.4:30985415-30985434 None:intergenic 45.0%
TGGAATAGCCATACAAGCAG+TGG + chr2.4:30985494-30985513 None:intergenic 45.0%
TGTGAGTCCAGCATATTCCT+GGG + chr2.4:30988217-30988236 None:intergenic 45.0%
TTCTCAACAACGGCGATAAG+AGG - chr2.4:30983241-30983260 MS.gene60927:CDS 45.0%
TTTGCGTAGGATTCAACCTC+TGG + chr2.4:30985718-30985737 None:intergenic 45.0%
! AAGATTGGTAGAGCACTTCC+AGG - chr2.4:30982815-30982834 MS.gene60927:CDS 45.0%
! ACTCAGTGGCTACTTGGTTT+TGG + chr2.4:30985514-30985533 None:intergenic 45.0%
! ATTGACTCACCTGTTGGAGT+TGG - chr2.4:30983183-30983202 MS.gene60927:intron 45.0%
! CGGGTATTGTCAAACCTTGA+CGG + chr2.4:30986580-30986599 None:intergenic 45.0%
! CTGCAGGGTATTCAGGATTA+AGG + chr2.4:30986483-30986502 None:intergenic 45.0%
! GACTTTAGGGATTGTAGGCA+CGG - chr2.4:30987679-30987698 MS.gene60927:intron 45.0%
! GCCTTATTCACTGTACCATC+TGG - chr2.4:30986452-30986471 MS.gene60927:intron 45.0%
! GGCTTATTGACTGTTTACGG+TGG + chr2.4:30986348-30986367 None:intergenic 45.0%
! TATCTCTGTTTGCTGCAGGT+AGG - chr2.4:30984596-30984615 MS.gene60927:intron 45.0%
! TCGGCTTGCTTAAAAGTGGA+AGG - chr2.4:30986523-30986542 MS.gene60927:intron 45.0%
! TGAAGTGTCCATGAGTGAAG+TGG - chr2.4:30983811-30983830 MS.gene60927:intron 45.0%
! TGCCGAAAACGTGTCATTAG+GGG - chr2.4:30984564-30984583 MS.gene60927:intron 45.0%
! TTCCTACTGGTCTGCGAATA+TGG - chr2.4:30987849-30987868 MS.gene60927:intron 45.0%
!! AGCATCGGCTTGCTTAAAAG+TGG - chr2.4:30986519-30986538 MS.gene60927:intron 45.0%
!! GCAAGTTTTGGTCTATGCAG+AGG + chr2.4:30988273-30988292 None:intergenic 45.0%
!! TTGTAAATGTAAGGGGTGCC+GGG - chr2.4:30988238-30988257 MS.gene60927:CDS 45.0%
!!! AATAATTTAAAACTTAATTA+TGG + chr2.4:30987124-30987143 None:intergenic 5.0%
!!! ATAATTTAAAACTTAATTAT+GGG + chr2.4:30987123-30987142 None:intergenic 5.0%
AACAACGGCGATAAGAGGAC+AGG - chr2.4:30983246-30983265 MS.gene60927:CDS 50.0%
AACAGTGTCAGGGACATCGT+AGG + chr2.4:30986038-30986057 None:intergenic 50.0%
ACAATACCCGACCCAGAAGA+GGG - chr2.4:30986590-30986609 MS.gene60927:CDS 50.0%
ACGCCTTCAACCAATGGTGT+CGG - chr2.4:30984986-30985005 MS.gene60927:intron 50.0%
ACTTGAAGCTTCCTCCGAGT+TGG + chr2.4:30987516-30987535 None:intergenic 50.0%
AGCATGCTGCATAGGTTCAG+GGG - chr2.4:30986638-30986657 MS.gene60927:CDS 50.0%
AGCGAATCTGGCTGGAGATA+AGG + chr2.4:30985279-30985298 None:intergenic 50.0%
AGTCTCATAGCAGGCCCAAA+GGG - chr2.4:30983429-30983448 MS.gene60927:intron 50.0%
CAGCATGCTGCATAGGTTCA+GGG - chr2.4:30986637-30986656 MS.gene60927:CDS 50.0%
CAGGCTTAACTTCCTGTGAC+TGG + chr2.4:30986216-30986235 None:intergenic 50.0%
CCTCATCAATCAGAACCCTC+TGG + chr2.4:30983783-30983802 None:intergenic 50.0%
CTCCTAATTGGAGAGCTGCA+GGG + chr2.4:30986498-30986517 None:intergenic 50.0%
CTTCCTGTGACTGGAATACG+CGG + chr2.4:30986207-30986226 None:intergenic 50.0%
GAGTGGTTCAAGAGTTGGCA+TGG + chr2.4:30988331-30988350 None:intergenic 50.0%
GCTAAGGCATAAACTGCTGC+TGG + chr2.4:30985747-30985766 None:intergenic 50.0%
GGAGAAGAAGTTGTTTGCGC+AGG - chr2.4:30986611-30986630 MS.gene60927:CDS 50.0%
GGATACATTCAGGCGTCTAC+TGG - chr2.4:30983463-30983482 MS.gene60927:intron 50.0%
GGCTGTGATTACTCGGAAGT+AGG + chr2.4:30986398-30986417 None:intergenic 50.0%
GTAGCCACTGAGTGTACTTC+AGG - chr2.4:30985521-30985540 MS.gene60927:intron 50.0%
TACCCTGCAGCTCTCCAATT+AGG - chr2.4:30986493-30986512 MS.gene60927:intron 50.0%
TAGTCTCATAGCAGGCCCAA+AGG - chr2.4:30983428-30983447 MS.gene60927:intron 50.0%
TCATCATACCATGCACGCCA+GGG + chr2.4:30988074-30988093 None:intergenic 50.0%
TCTCCTAATTGGAGAGCTGC+AGG + chr2.4:30986499-30986518 None:intergenic 50.0%
TGGCGTGCATGGTATGATGA+CGG - chr2.4:30988074-30988093 MS.gene60927:CDS 50.0%
TGGTTCAAGAGTTGGCATGG+AGG + chr2.4:30988328-30988347 None:intergenic 50.0%
TTCCTGTGACTGGAATACGC+GGG + chr2.4:30986206-30986225 None:intergenic 50.0%
TTCTTCTCCCTCTTCTGGGT+CGG + chr2.4:30986600-30986619 None:intergenic 50.0%
TTTGTGTTGGGAGAGTTGGG+AGG - chr2.4:30983354-30983373 MS.gene60927:intron 50.0%
! ACAACTCTGGAGGTTGCGTT+TGG - chr2.4:30986765-30986784 MS.gene60927:CDS 50.0%
! ACGTCATGCCACTTCACTCA+TGG + chr2.4:30983822-30983841 None:intergenic 50.0%
! CCAGAGGGTTCTGATTGATG+AGG - chr2.4:30983780-30983799 MS.gene60927:intron 50.0%
! GGCTGGAGATAAGGCATTTG+AGG + chr2.4:30985270-30985289 None:intergenic 50.0%
! GTGCTGTTGCAGAGCTATCT+TGG - chr2.4:30985915-30985934 MS.gene60927:intron 50.0%
!! CAGAGTGTTGGAAGACTCAG+AGG - chr2.4:30987293-30987312 MS.gene60927:intron 50.0%
!! CTATGTAGCACCGACACCAT+TGG + chr2.4:30984999-30985018 None:intergenic 50.0%
!! GGGAGTTCTGGAAAGAACGT+AGG + chr2.4:30987148-30987167 None:intergenic 50.0%
!! TAAGGCAAGACTTGTTGGCC+AGG + chr2.4:30986438-30986457 None:intergenic 50.0%
AACACCGTGAGGGACAACTC+TGG - chr2.4:30986752-30986771 MS.gene60927:CDS 55.0%
AACCAAGCGTACGCGTCTAG+AGG - chr2.4:30984104-30984123 MS.gene60927:intron 55.0%
AACCTCTAGACGCGTACGCT+TGG + chr2.4:30984109-30984128 None:intergenic 55.0%
ACCTCCAGAGTTGTCCCTCA+CGG + chr2.4:30986759-30986778 None:intergenic 55.0%
AGCCAGATTCGCTTGCAGCT+CGG - chr2.4:30985286-30985305 MS.gene60927:intron 55.0%
AGCTCTGCAACAGCACCTGA+TGG + chr2.4:30985911-30985930 None:intergenic 55.0%
ATCAGCGGTGAGAGCTATGC+AGG - chr2.4:30984304-30984323 MS.gene60927:intron 55.0%
ATGCAGAGGAACTTCGTGCC+CGG + chr2.4:30988259-30988278 None:intergenic 55.0%
CATCATACCATGCACGCCAG+GGG + chr2.4:30988073-30988092 None:intergenic 55.0%
CATGGAGGCTCCTGCTAAGA+AGG + chr2.4:30988313-30988332 None:intergenic 55.0%
CGGCGATAAGAGGACAGGTA+AGG - chr2.4:30983251-30983270 MS.gene60927:CDS 55.0%
GACAATACCCGACCCAGAAG+AGG - chr2.4:30986589-30986608 MS.gene60927:CDS 55.0%
GAGAGGAGACATGGAAGCCA+TGG - chr2.4:30985656-30985675 MS.gene60927:intron 55.0%
GCAGCATGCTGCATAGGTTC+AGG - chr2.4:30986636-30986655 MS.gene60927:CDS 55.0%
GCGGTGAGTGGTTCAAGAGT+TGG + chr2.4:30988336-30988355 None:intergenic 55.0%
GGATGGACCCAGGAATATGC+TGG - chr2.4:30988207-30988226 MS.gene60927:CDS 55.0%
GGCGTGCATGGTATGATGAC+GGG - chr2.4:30988075-30988094 MS.gene60927:CDS 55.0%
GTCATCATACCATGCACGCC+AGG + chr2.4:30988075-30988094 None:intergenic 55.0%
GTGGATGCTTGTGGGAGTTC+TGG + chr2.4:30987160-30987179 None:intergenic 55.0%
GTGTCAGGGACATCGTAGGA+AGG + chr2.4:30986034-30986053 None:intergenic 55.0%
TCTTCTCCCTCTTCTGGGTC+GGG + chr2.4:30986599-30986618 None:intergenic 55.0%
TGCTGCATAGGTTCAGGGGA+AGG - chr2.4:30986642-30986661 MS.gene60927:CDS 55.0%
! ATCCTATGGCTTGGGCCCTT+TGG + chr2.4:30983447-30983466 None:intergenic 55.0%
! CCATTGGTTGAAGGCGTGTC+CGG + chr2.4:30984983-30985002 None:intergenic 55.0%
! GCACCGACACCATTGGTTGA+AGG + chr2.4:30984992-30985011 None:intergenic 55.0%
! GCGAGGTAAGTGAAGTGCCA+AGG - chr2.4:30986873-30986892 MS.gene60927:intron 55.0%
! GCGTGCATGGTATGATGACG+GGG - chr2.4:30988076-30988095 MS.gene60927:CDS 55.0%
! TCCTATGGCTTGGGCCCTTT+GGG + chr2.4:30983446-30983465 None:intergenic 55.0%
! TGGAGAGCTGCAGGGTATTC+AGG + chr2.4:30986490-30986509 None:intergenic 55.0%
!! GTGCTGTGCTTTTCGGTGCA+AGG + chr2.4:30987329-30987348 None:intergenic 55.0%
!! TGCATGGTATGATGACGGGG+AGG - chr2.4:30988079-30988098 MS.gene60927:CDS 55.0%
ACCGTGAGGGACAACTCTGG+AGG - chr2.4:30986755-30986774 MS.gene60927:CDS 60.0%
CAGGCTGCAGCATGCTGCAT+AGG - chr2.4:30986630-30986649 MS.gene60927:CDS 60.0%
CCGGACACGCCTTCAACCAA+TGG - chr2.4:30984980-30984999 MS.gene60927:intron 60.0%
CTGCAGGTCTCCCATTCAGC+AGG + chr2.4:30987410-30987429 None:intergenic 60.0%
CTGCTGAATGGGAGACCTGC+AGG - chr2.4:30987408-30987427 MS.gene60927:intron 60.0%
GAGCTGCAAGCGAATCTGGC+TGG + chr2.4:30985287-30985306 None:intergenic 60.0%
GTCCCGCGTATTCCAGTCAC+AGG - chr2.4:30986201-30986220 MS.gene60927:intron 60.0%
TCAGGTAGGAGGATGGACCC+AGG - chr2.4:30988197-30988216 MS.gene60927:CDS 60.0%
!! CTGCTGGGGAGCATTTGCGT+AGG + chr2.4:30985731-30985750 None:intergenic 60.0%
!! CTGGAGGTTGCGTTTGGTGC+AGG - chr2.4:30986771-30986790 MS.gene60927:CDS 60.0%
!! GAGGTTGCGTTTGGTGCAGG+TGG - chr2.4:30986774-30986793 MS.gene60927:CDS 60.0%
AGCTTCCAACCGTGAGCCCC+TGG - chr2.4:30988054-30988073 MS.gene60927:CDS 65.0%
CACTGACACGTCCCAGACGC+CGG - chr2.4:30984961-30984980 MS.gene60927:intron 65.0%
GCCCAAAGGGCCCAAGCCAT+AGG - chr2.4:30983442-30983461 MS.gene60927:intron 65.0%
GGCCGAGCTGCAAGCGAATC+TGG + chr2.4:30985291-30985310 None:intergenic 65.0%
GTTGGGAGGTAGCCCATCCC+TGG - chr2.4:30983368-30983387 MS.gene60927:intron 65.0%
! TGAAGGCGTGTCCGGCGTCT+GGG + chr2.4:30984975-30984994 None:intergenic 65.0%
! TTGAAGGCGTGTCCGGCGTC+TGG + chr2.4:30984976-30984995 None:intergenic 65.0%
CCATGCACGCCAGGGGCTCA+CGG + chr2.4:30988066-30988085 None:intergenic 70.0%
CCGTGAGCCCCTGGCGTGCA+TGG - chr2.4:30988063-30988082 MS.gene60927:CDS 75.0%
GCACGCCAGGGGCTCACGGT+TGG + chr2.4:30988062-30988081 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 30982707 30988365 30982707 ID=MS.gene60927
chr2.4 mRNA 30982707 30988365 30982707 ID=MS.gene60927.t1;Parent=MS.gene60927
chr2.4 exon 30987984 30988365 30987984 ID=MS.gene60927.t1.exon1;Parent=MS.gene60927.t1
chr2.4 CDS 30987984 30988365 30987984 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
chr2.4 exon 30986747 30986839 30986747 ID=MS.gene60927.t1.exon2;Parent=MS.gene60927.t1
chr2.4 CDS 30986747 30986839 30986747 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
chr2.4 exon 30986579 30986664 30986579 ID=MS.gene60927.t1.exon3;Parent=MS.gene60927.t1
chr2.4 CDS 30986579 30986664 30986579 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
chr2.4 exon 30986204 30986458 30986204 ID=MS.gene60927.t1.exon4;Parent=MS.gene60927.t1
chr2.4 CDS 30986204 30986458 30986204 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
chr2.4 exon 30983643 30983776 30983643 ID=MS.gene60927.t1.exon5;Parent=MS.gene60927.t1
chr2.4 CDS 30983643 30983776 30983643 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
chr2.4 exon 30983193 30983288 30983193 ID=MS.gene60927.t1.exon6;Parent=MS.gene60927.t1
chr2.4 CDS 30983193 30983288 30983193 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
chr2.4 exon 30982972 30983077 30982972 ID=MS.gene60927.t1.exon7;Parent=MS.gene60927.t1
chr2.4 CDS 30982972 30983077 30982972 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
chr2.4 exon 30982707 30982871 30982707 ID=MS.gene60927.t1.exon8;Parent=MS.gene60927.t1
chr2.4 CDS 30982707 30982871 30982707 ID=cds.MS.gene60927.t1;Parent=MS.gene60927.t1
Gene Sequence

>MS.gene60927

ATGGCCAATTCTAAGTGGTCTCAAATTTTGTTCATTGTCATCATAACATTGGCAAACCTTTTCCAATGTAACATTGCAACAGAACCATTTGTCCAACAAGGACAGGACAAGATTGGTAGAGCACTTCCAGGTCAAAACTTCAACATCAGTTTTGAACATTATTCTGGTTATATAACAGTGAATGAGGATGTTGGTAGGAATTTGTTTTACTGGTTCATTCAAGCTGATCATGTAGATCCTACTTCTAAACCACTTCTTTTATGGTTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTATGGTGAAGCTGAGGAAATTGGTCCTTTTCATATTAATTCTGATGGCAAAAACCTTCATTTTAATCCTTATTCTTGGAATCAAGGTGAGTTAGAGTTATTCTGTGTTTAACAATTCAAAAAATATATTTATCTGTTTAATTTGTGTTTTTGTTTTTTGTGGTTGCCAATATTCTTTATATTGACTCACCTGTTGGAGTTGGATTTTCATATTCAACAAAGAATTCATCTGATGACATTCTCAACAACGGCGATAAGAGGACAGGTAAGGTGTCACTTACTTGAATCTAGATTTTTTGTCTTTACTAATACGCGCTTATTTACACAGTAAGTAATCTTGATCATACCAACTTTGTGTTGGGAGAGTTGGGAGGTAGCCCATCCCTGGTAAAAAAAATAAAATCAGACGTCCTGCTGCTGAGAATTAGTCTCATAGCAGGCCCAAAGGGCCCAAGCCATAGGATACATTCAGGCGTCTACTGGGGTCAAAGATCCTAATTATGGTGGGTGACGAAAAATGTCTTGGTCATTGATTTGAGATTAGTCGTATAACATTACACCTTTATTAGATCATCTTTAAATAATCTATACCTTTGATTTGTGGTCAGACGACCAAGATTAAATAAGGTGTCACACATTTGGAGTCTCAGTTATGAAGTTAAACAAAGGATTCTTACTCTTAATAGGCTAGTATTTTATGACGAGTCCTCTGATTTGGCTAATACTCTCGTTATATTGGTGCTTTTGTTGGGAGGTCTACTTCTTTGAAAGAATTGACCAGAGGGTTCTGATTGATGAGGAAGTTGAGTGAAGTGTCCATGAGTGAAGTGGCATGACGTTGTCTCTCGAATAGTAAGATTTTGTAAAATCGATTTTAGTTAAAATTCAGCTGGATGTAAAGTAATATATGCTTGGATACATTCATGTAAAAATAATTGAACAATAAATTTCAAGCATGAAATCACGTTTTCAGGCTAAAACTTTAAATCAAAGTTTCAAGTCAGAATCTATTCTAGAGACACAATCAATTCTACTTGACAATACTCAATATCTAAATCAATCTAATAATCTCATAATGACTTTTGCATCCATCGAAAATGAAACCAAGCGTACGCGTCTAGAGGTTCTCCCTAACAGACTAGTTGTTTTGGATGAGCTCTCTTATTGGAGTTCATAACACTTCATGTATGTTCATTGAATAAAATCAAATTAATAATTCTTTATGTGCAGCTGAGGATAATCTCATATTTCTATTGAAGTGGTTTGAGCGTTTTCCACAATACAAAAAAACAGACTTTTTCATCAGCGGTGAGAGCTATGCAGGTAAACACAAATGGTGAGATAGATAAGGACACTTATCATGTCAAGTGTTTGAGTTCTCTAATTTTGGTTTTCCTTGTTTCAGGACATTATGTTCCTCAACTTAGCCAAGTTATTGTCAAGTACAACTCAGCTACAAAACACAATTCTATAAATTTCAAAGGTTTCATGGTATGAATTTCGTTTTTACACAAAAATAGTACTAATCACATGCAATATTGCAACAACGTGGAGAATAAATTGCCGAAAACGTGTCATTAGGGGAATAATATGTATCTCTGTTTGCTGCAGGTAGGAAATGCTCTAACAGACGATTTCCATGATCAGTTGGGGATTTTCGAGTTTATGTGGACAAATGGTATGATTTCGGATCAGACATTCAAGCTCTTGAACTTGCTATGTGATTTTCAGTCAGTCGAACATCCTTCACAGTCCTGTGAAAGGATCTTGGAAATTGCTGATAAAGAAATGGGTAATATAGACCCATACAGTATCTTCACTCCTCCTTGCCATGCTAATGATAATCAGCAGGTCAAAAGAAAGAATGTAAGTTACTATTCTCGCATCTTTACCTACACAAACATCAATAATTATTTAATAAAATAGAAGTAATTGAATGCAACAACATCATTGTTAGACACTGACACGTCCCAGACGCCGGACACGCCTTCAACCAATGGTGTCGGTGCTACATAGATAGAGTACATGGGTTATATCCTGGTTTTGTTTGTATACAACTAGGCTGAATATTAAGCATAATTAAATTAGTTAATTCTTGTTATGACAGTTCAGTAGTTATATCATTTCTGTTGCAACCAATTACTGAGCTTCCTTTTACTCTAAACTACGAGTTTAAAGAATTAGAATACAGAAACCAATCACTTGCAACTTTTCATTTTCAATCTAAACTCGCAGAATTATCTAAAATCTTCATGGTATCACAACCTCAAATGCCTTATCTCCAGCCAGATTCGCTTGCAGCTCGGCCACAATACATAACTCTTCTTTTTCGGGTGCAAACTCTTTTATTCCAGAATCAACACATCATTCATTCTCCTCCATTTACGAATCCAGTTCCTTTGTTTTCCCCCTTAATGTGAGCCTCATGAGCAACACACAAATAAACAAAATGATGTTGTTGATTTTGCATCCCTGAATCTAACTCAAACCACTGCTTGTATGGCTATTCCAAAACCAAGTAGCCACTGAGTGTACTTCAGGTTCAATATGCTAGTTCATTTGCTCCTCAAATTAATTTTCAATCACAAATTAGTATCGGACCTTGAGGATCCAATACTAATTTCAGAGGATGTAAAGGAGCAAGATCTATTAAGAGAGGAGACATGGAAGCCATGGTAATTTCAATGTCAAATATGTTACTCTTAACTGTTACCAGAGGTTGAATCCTACGCAAATGCTCCCCAGCAGCAGTTTATGCCTTAGCCGTTCATACCTCATGAGAATTCGTTTCAGTATGGTGGCCTTCCATTACTTAAAACCTTGTTAGTGTTAGTCAAATTGCAATAGATAACAATGTTTATTTTGAGTTTACCCTCTTTCGTTGCATTGTTAAATTTCAAGTTAACCATCAGGTGCTGTTGCAGAGCTATCTTGGTCAATAACTCAAGATAGTCACCACTCGTCTAGTGCTGTTTTTGATTCCTTTTTCTGTTTTGCAAATACTTTGGTCCTTTCAGCTTCTTATGTACCTTCCTACGATGTCCCTGACACTGTTATTCCACACACTTCCAATTTTTTCCCTATGGCATACTAGGTTAGACCATCCAATTGAAACTTTCACACGTTCAAAATGTACTCAAATTCTGTAATGTTTCAATTTCCAATAAAAATAAAGAGGAGTCTGTGTAACACGGGAAAGTCCCGCGTATTCCAGTCACAGGAAGTTAAGCCTGTTAGGATGTTACTGTACACAAATAGATGATTTTTTATCAGCCAGATAAATTTATTGAACTAAAGTAGATTTATACGATCACAGTTTAGAGGAAGGGTAGGAGCCTAGATCCACCGTAAACAGTCAATAAGCCTATGCTTAACCACTAATGTGAAGGTTTCCTACTTCCGAGTAATCACAGCCATATCTTTTATGAAACTCCTGGCCAACAAGTCTTGCCTTATTCACTGTACCATCTGGTTTTTCCTTAATCCTGAATACCCTGCAGCTCTCCAATTAGGAGAAGCATCGGCTTGCTTAAAAGTGGAAGGCTCTGAATCTATATAGAGAAGTTTTAGGATTCCGTCAAGGTTTGACAATACCCGACCCAGAAGAGGGAGAAGAAGTTGTTTGCGCAGGCTGCAGCATGCTGCATAGGTTCAGGGGAAGGAGAAACAACTTGTGCAGTAGAAGGTTGACACAAAGACGGACCAGATAGTTAAAAAGTAATAGAAGGAATGGGGTCAGTAGTTAGAATAACACCGTGAGGGACAACTCTGGAGGTTGCGTTTGGTGCAGGTGGAGAGACATTCTTAATGGAAAAAGATAATCTTTTAGTCTTAACCCTTGAAAACTGTCGGATAATCTGATGCTGAGTAGCGAGGTAAGTGAAGTGCCAAGGAAAATCATTCCGAACAACTTAAAAAGGGAATTTAGTTTCGTCACATATGACATCTTTAGAAATGAACATTTTTCCTTCCTTATCTAGATACTTGTACCTTTCATGACAAGATAAGTAACCAAGTAAGGTACATTCGATAGATCTAAATTGAAGTTTATATTTTTCAAATACACGAAATATCTAACTGACATTTAATTTTTTACTTAAGAAAAGTTCTGTCTGCTCCCATAATTAAGTTTTAAATTATTTCCTACGTTCTTTCCAGAACTCCCACAAGCATCCACAATAGTAGAAATTCCAGCTTATGAACAACAGCTATGGCTACTGATGCATATTCTCAACACTGATTTATATGATTTTATAGCATAAACCCTCATTCATATGCTCTTTCATGTAACAGAGTGTTGGAAGACTCAGAGGTGTGTATGATCCTTGCACCGAAAAGCACAGCACTATATACTTCAATCGACCAGAGGTCCAAAAGATTCTACATGTTGATCCAGATCATAAGCCTGCTGAATGGGAGACCTGCAGGTAATGCTCTACTTATTTTCACATCATTACAAATCGCATAACCACCTTTTTAACATTGAAAAATAGAAGTGACAAAACAAAAACCAACTCGGAGGAAGCTTCAAGTATAGAACTGCAATGTTGAAACTGAATGATACTATCTCTGCACCGTTGTTGTACTTTTCTTACAGAGTTCCTTTGCATATGATACTAAGTTACTAACTAACAGTTCAAGAATCATTGCAACTACATCATTTGATATTACGTAGTGACTTTAGGGATTGTAGGCACGGCATAAAGTGCATCACCATATTTCTTTCATGTTTTTAACAAACTCTCAAGATCAGCATCCACTTATTCTCTCATTCATTGCAGCACTGTGGTAAACACAAACTGGAAGGATTCTCCTAGAACAGTACTCGACATATATCGTGAACTTATTCCTACTGGTCTGCGAATATGGATATTCAGGTTACTCATTCAATCACTGTAACTCGTATATCATTTTTTTTCTCGAAAAATAATTTTATGCTCCAAAGAGGCTTACACTGTTTTTGTGTTTCACAATTCATCTATGTCATGCCAGTGGTAATACAGATGCGGTAATCCCGGTAACATCTACTCGCTATACTATAAATGCTCTCAAGCTTCCAACCGTGAGCCCCTGGCGTGCATGGTATGATGACGGGGAGGTAAGTCAGTAATAGATAAATAGATAGATAGATAGATAAATATTGTTCACTTCACATTTACTTCAGTGCATTGATATTGATATCTAAGTGAAACAATCAGGTAGGAGGATGGACCCAGGAATATGCTGGACTCACATTTGTAAATGTAAGGGGTGCCGGGCACGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAACATTGATCAAAGCCTTCTTAGCAGGAGCCTCCATGCCAACTCTTGAACCACTCACCGCCGCCTCTTGA
Protein sequence

>MS.gene60927.t1

MANSKWSQILFIVIITLANLFQCNIATEPFVQQGQDKIGRALPGQNFNISFEHYSGYITVNEDVGRNLFYWFIQADHVDPTSKPLLLWFNGGPGCSSIAYGEAEEIGPFHINSDGKNLHFNPYSWNQAEDNLIFLLKWFERFPQYKKTDFFISGESYAGHYVPQLSQVIVKYNSATKHNSINFKGFMVGNALTDDFHDQLGIFEFMWTNGMISDQTFKLLNLLCDFQSVEHPSQSCERILEIADKEMGNIDPYSIFTPPCHANDNQQVKRKNSVGRLRGVYDPCTEKHSTIYFNRPEVQKILHVDPDHKPAEWETCSTVVNTNWKDSPRTVLDIYRELIPTGLRIWIFSGNTDAVIPVTSTRYTINALKLPTVSPWRAWYDDGEVGGWTQEYAGLTFVNVRGAGHEVPLHRPKLALTLIKAFLAGASMPTLEPLTAAS