AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26819

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26819.t1 MTR_4g122950 94.179 481 23 3 1 479 1 478 0.0 936
MS.gene26819.t1 MTR_4g122960 86.279 481 59 4 1 479 1 476 0.0 844
MS.gene26819.t1 MTR_4g089155 52.318 453 201 8 33 481 47 488 1.19e-167 482
MS.gene26819.t1 MTR_2g012860 48.548 482 228 7 6 481 9 476 1.73e-165 476
MS.gene26819.t1 MTR_2g012850 51.116 448 202 7 38 481 34 468 1.65e-163 471
MS.gene26819.t1 MTR_4g075150 50.993 453 204 8 30 478 25 463 2.73e-159 460
MS.gene26819.t1 MTR_4g075150 50.552 453 204 8 30 478 25 461 2.13e-158 457
MS.gene26819.t1 MTR_7g013790 46.502 486 228 8 2 480 6 466 1.75e-149 435
MS.gene26819.t1 MTR_2g062990 47.333 450 216 8 36 482 35 466 3.04e-142 417
MS.gene26819.t1 MTR_2g063000 43.595 484 244 7 3 482 9 467 3.32e-141 414
MS.gene26819.t1 MTR_1g095560 45.032 473 236 7 10 479 6 457 9.29e-140 410
MS.gene26819.t1 MTR_1g095540 44.191 482 241 6 1 479 1 457 6.36e-139 407
MS.gene26819.t1 MTR_2g062980 45.556 450 224 7 36 482 35 466 1.50e-138 407
MS.gene26819.t1 MTR_3g079620 46.460 452 206 7 37 479 75 499 2.80e-137 405
MS.gene26819.t1 MTR_3g079590 47.640 445 206 6 38 482 76 493 3.76e-137 404
MS.gene26819.t1 MTR_3g079560 46.429 448 212 7 33 479 71 491 8.04e-137 404
MS.gene26819.t1 MTR_2g081620 45.111 450 226 7 36 482 36 467 2.53e-136 402
MS.gene26819.t1 MTR_1g020090 44.270 445 217 4 36 480 86 499 3.73e-135 399
MS.gene26819.t1 MTR_3g079600 46.476 454 212 7 33 482 69 495 5.47e-135 399
MS.gene26819.t1 MTR_1g021020 43.640 456 222 4 29 481 67 490 2.40e-134 397
MS.gene26819.t1 MTR_1g021010 44.273 454 223 5 29 481 65 489 5.77e-134 396
MS.gene26819.t1 MTR_1g095560 41.980 505 237 8 10 479 6 489 8.91e-134 395
MS.gene26819.t1 MTR_3g079570 46.742 445 209 7 38 482 77 493 1.26e-133 395
MS.gene26819.t1 MTR_3g034290 45.011 451 221 8 33 481 68 493 2.96e-133 394
MS.gene26819.t1 MTR_0003s0560 45.556 450 218 7 33 481 67 490 1.18e-132 393
MS.gene26819.t1 MTR_3g079630 45.733 457 208 9 37 482 75 502 6.59e-128 381
MS.gene26819.t1 MTR_2g063000 39.627 482 235 7 3 482 9 436 6.45e-121 361
MS.gene26819.t1 MTR_5g072570 38.571 490 255 13 10 482 6 466 5.39e-106 324
MS.gene26819.t1 MTR_3g090130 38.144 485 258 13 13 482 4 461 2.19e-105 322
MS.gene26819.t1 MTR_3g090150 38.509 483 262 11 14 482 7 468 3.94e-105 322
MS.gene26819.t1 MTR_3g498755 39.046 461 243 12 35 480 10 447 1.61e-103 317
MS.gene26819.t1 MTR_3g034290 44.262 366 178 7 33 397 68 408 1.63e-102 313
MS.gene26819.t1 MTR_3g434850 39.348 460 234 14 36 480 27 456 2.47e-101 311
MS.gene26819.t1 MTR_8g099930 40.215 465 238 13 29 478 23 462 3.01e-99 306
MS.gene26819.t1 MTR_7g021130 37.372 487 259 13 8 478 1 457 1.09e-98 305
MS.gene26819.t1 MTR_2g449850 36.947 452 254 8 36 479 35 463 4.17e-98 303
MS.gene26819.t1 MTR_0003s0560 51.685 267 126 2 33 299 67 330 7.68e-92 283
MS.gene26819.t1 MTR_1g040370 35.111 450 228 8 34 478 25 415 4.83e-91 283
MS.gene26819.t1 MTR_8g011350 31.388 497 295 13 12 474 8 492 3.10e-79 255
MS.gene26819.t1 MTR_7g080180 32.885 520 284 17 1 477 1 498 2.81e-78 253
MS.gene26819.t1 MTR_7g051430 32.553 470 275 13 40 474 30 492 6.77e-78 252
MS.gene26819.t1 MTR_8g011350 30.233 473 284 13 12 450 8 468 2.25e-69 229
MS.gene26819.t1 MTR_7g080180 32.008 478 261 16 1 436 1 456 3.14e-67 223
MS.gene26819.t1 MTR_1g102130 29.697 495 277 13 2 478 49 490 1.15e-62 212
MS.gene26819.t1 MTR_7g051430 31.378 392 228 12 40 397 30 414 1.51e-58 199
MS.gene26819.t1 MTR_4g021535 30.193 467 289 16 6 461 10 450 7.38e-56 193
MS.gene26819.t1 MTR_3g100420 28.457 499 309 15 3 477 22 496 1.32e-54 190
MS.gene26819.t1 MTR_2g018600 28.540 452 287 14 43 477 37 469 2.62e-54 189
MS.gene26819.t1 MTR_2g018590 29.176 449 289 14 43 477 36 469 1.13e-53 187
MS.gene26819.t1 MTR_4g021490 28.475 446 290 14 39 473 39 466 1.46e-53 187
MS.gene26819.t1 MTR_4g021520 28.764 445 290 12 39 473 39 466 1.70e-52 184
MS.gene26819.t1 MTR_4g021500 30.248 443 274 15 39 467 39 460 3.06e-52 190
MS.gene26819.t1 MTR_4g021500 26.437 435 271 14 51 473 486 883 7.57e-41 157
MS.gene26819.t1 MTR_4g021500 30.248 443 274 15 39 467 39 460 3.19e-52 190
MS.gene26819.t1 MTR_4g021500 27.356 435 285 15 51 473 486 901 6.56e-43 163
MS.gene26819.t1 MTR_2g018630 28.733 442 284 13 43 473 40 461 5.55e-51 180
MS.gene26819.t1 MTR_4g021510 29.412 442 279 14 39 467 38 459 1.65e-50 179
MS.gene26819.t1 MTR_4g021530 28.700 446 289 15 39 473 39 466 2.40e-50 178
MS.gene26819.t1 MTR_4g057585 28.507 442 270 14 45 475 87 493 1.35e-49 177
MS.gene26819.t1 MTR_3g045770 27.352 457 286 12 35 473 22 450 3.37e-49 175
MS.gene26819.t1 MTR_4g057595 27.955 440 271 14 47 475 90 494 4.34e-48 173
MS.gene26819.t1 MTR_4g021520 29.238 407 262 11 39 436 39 428 6.24e-47 168
MS.gene26819.t1 MTR_2g095730 25.951 447 271 13 48 474 88 494 4.68e-46 167
MS.gene26819.t1 MTR_1g094155 28.140 430 271 12 52 474 88 486 1.32e-45 166
MS.gene26819.t1 MTR_4g122970 87.500 88 9 2 1 87 1 87 3.56e-45 153
MS.gene26819.t1 MTR_2g095750 26.444 450 272 13 48 479 94 502 1.49e-43 160
MS.gene26819.t1 MTR_2g009200 28.511 470 259 16 13 463 9 420 2.26e-43 159
MS.gene26819.t1 MTR_4g057570 25.855 468 275 13 33 474 68 489 2.52e-43 160
MS.gene26819.t1 MTR_4g057600 25.806 434 276 14 52 474 93 491 8.75e-42 155
MS.gene26819.t1 MTR_1g050545 27.293 447 252 14 53 474 82 480 1.01e-41 155
MS.gene26819.t1 MTR_5g097180 26.498 434 258 11 56 472 43 432 1.52e-40 151
MS.gene26819.t1 MTR_4g021535 26.981 467 257 19 6 461 10 403 6.33e-38 144
MS.gene26819.t1 MTR_4g084710 27.230 426 265 13 56 472 45 434 7.66e-37 141
MS.gene26819.t1 MTR_0075s0010 27.000 400 186 14 38 421 6 315 1.61e-34 132
MS.gene26819.t1 MTR_2g018630 25.967 362 243 10 118 473 14 356 1.65e-31 124
MS.gene26819.t1 MTR_2g095710 23.756 442 284 17 42 474 83 480 7.38e-27 113
MS.gene26819.t1 MTR_4g056520 24.887 442 282 18 57 472 36 453 1.36e-18 88.6
MS.gene26819.t1 MTR_1g051175 40.000 110 57 4 36 138 2 109 2.27e-17 82.8
MS.gene26819.t1 MTR_5g021570 43.137 102 42 4 193 292 271 358 2.56e-16 81.3
MS.gene26819.t1 MTR_2g084530 26.185 443 269 20 57 470 36 449 2.61e-15 78.6
MS.gene26819.t1 MTR_7g100560 27.962 211 84 6 51 261 69 211 2.56e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26819.t1 AT3G17180 66.887 453 144 4 29 479 28 476 0.0 626
MS.gene26819.t1 AT3G17180 65.848 407 134 3 29 434 28 430 0.0 558
MS.gene26819.t1 AT1G11080 50.620 484 225 7 5 481 16 492 1.52e-168 484
MS.gene26819.t1 AT1G11080 50.620 484 225 7 5 481 16 492 1.92e-168 484
MS.gene26819.t1 AT4G15100 50.993 453 206 8 36 481 41 484 1.27e-167 482
MS.gene26819.t1 AT5G23210 52.298 457 205 7 32 479 44 496 7.76e-167 480
MS.gene26819.t1 AT1G61130 51.225 449 199 7 38 481 30 463 5.95e-164 471
MS.gene26819.t1 AT4G30610 49.469 471 220 8 10 478 8 462 1.04e-155 451
MS.gene26819.t1 AT2G24000 49.890 453 213 8 28 477 19 460 2.11e-149 434
MS.gene26819.t1 AT5G08260 45.303 479 249 8 10 481 7 479 9.10e-147 428
MS.gene26819.t1 AT2G24010 47.748 444 212 4 36 478 27 451 1.26e-146 427
MS.gene26819.t1 AT3G02110 45.895 475 247 7 5 478 6 471 4.30e-145 424
MS.gene26819.t1 AT5G23210 50.728 412 190 7 32 434 44 451 7.85e-145 423
MS.gene26819.t1 AT2G35780 47.758 446 210 6 36 478 26 451 2.93e-142 416
MS.gene26819.t1 AT2G24010 45.969 459 213 5 36 478 27 466 2.11e-141 414
MS.gene26819.t1 AT3G07990 48.198 444 209 8 38 478 32 457 6.23e-140 410
MS.gene26819.t1 AT5G23210 51.250 400 183 6 89 479 5 401 2.39e-138 404
MS.gene26819.t1 AT5G23210 51.263 396 181 6 93 479 8 400 2.26e-137 402
MS.gene26819.t1 AT4G30810 43.460 474 247 5 7 479 10 463 4.66e-137 404
MS.gene26819.t1 AT2G24010 43.542 480 211 6 40 478 2 462 1.85e-134 396
MS.gene26819.t1 AT2G35770 43.867 481 243 9 4 479 1 459 2.39e-132 391
MS.gene26819.t1 AT3G63470 43.043 460 227 8 25 478 67 497 2.97e-126 377
MS.gene26819.t1 AT5G23210 49.288 351 166 6 93 434 8 355 3.54e-115 343
MS.gene26819.t1 AT2G05850 40.638 470 246 9 17 478 40 484 7.87e-115 347
MS.gene26819.t1 AT3G52020 40.940 447 236 9 36 478 76 498 1.35e-112 342
MS.gene26819.t1 AT1G43780 39.479 461 241 10 38 482 36 474 1.06e-107 328
MS.gene26819.t1 AT3G52000 39.597 447 239 9 36 478 60 479 4.70e-107 327
MS.gene26819.t1 AT2G24010 44.385 374 173 5 40 397 2 356 8.72e-106 319
MS.gene26819.t1 AT3G52010 38.976 449 243 7 36 478 61 484 8.90e-106 324
MS.gene26819.t1 AT5G42240 39.783 460 242 11 33 478 26 464 5.21e-102 313
MS.gene26819.t1 AT2G33530 39.130 460 236 11 36 478 30 462 7.51e-102 313
MS.gene26819.t1 AT2G12480 39.693 456 242 12 33 478 25 457 1.44e-100 310
MS.gene26819.t1 AT1G28110 39.168 457 236 10 37 478 29 458 1.20e-98 305
MS.gene26819.t1 AT1G28110 39.168 457 236 10 37 478 29 458 1.20e-98 305
MS.gene26819.t1 AT2G12480 38.767 454 225 12 33 478 25 433 3.37e-96 298
MS.gene26819.t1 AT5G42230 38.147 464 244 13 33 478 22 460 1.14e-95 297
MS.gene26819.t1 AT5G42230 38.147 464 244 13 33 478 22 460 1.14e-95 297
MS.gene26819.t1 AT2G12480 38.326 454 225 12 33 478 25 431 2.08e-94 293
MS.gene26819.t1 AT2G12480 38.242 455 225 13 33 478 25 432 1.14e-92 288
MS.gene26819.t1 AT4G12910 34.252 508 286 17 5 477 3 497 9.95e-87 275
MS.gene26819.t1 AT3G25420 34.672 473 266 13 40 477 30 494 5.44e-84 268
MS.gene26819.t1 AT4G12910 33.476 466 263 16 5 436 3 455 6.54e-76 245
MS.gene26819.t1 AT2G24000 44.637 289 148 6 191 477 119 397 2.51e-74 239
MS.gene26819.t1 AT2G24000 58.000 100 40 2 28 126 19 117 8.61e-29 117
MS.gene26819.t1 AT2G22990 29.505 444 268 12 43 477 26 433 1.20e-58 199
MS.gene26819.t1 AT3G56540 57.233 159 66 2 36 194 76 232 2.00e-57 191
MS.gene26819.t1 AT3G45010 29.006 493 303 14 6 481 44 506 2.75e-56 195
MS.gene26819.t1 AT1G73280 29.263 475 286 14 15 477 5 441 2.39e-55 191
MS.gene26819.t1 AT1G73270 30.067 449 263 14 40 477 33 441 5.93e-55 190
MS.gene26819.t1 AT1G73270 30.067 449 263 14 40 477 33 441 8.51e-55 190
MS.gene26819.t1 AT2G22990 29.665 418 250 11 43 451 26 408 1.39e-54 188
MS.gene26819.t1 AT2G22990 29.594 419 251 11 43 452 26 409 1.67e-54 189
MS.gene26819.t1 AT2G22920 29.438 445 267 11 43 477 28 435 3.91e-54 187
MS.gene26819.t1 AT2G22970 29.213 445 266 13 43 477 28 433 3.65e-53 185
MS.gene26819.t1 AT3G10450 30.735 449 260 13 40 477 29 437 3.87e-53 185
MS.gene26819.t1 AT2G22990 28.604 444 263 13 43 477 26 424 3.50e-52 182
MS.gene26819.t1 AT1G73290 30.317 442 263 14 43 477 35 438 4.54e-52 182
MS.gene26819.t1 AT3G12203 30.405 444 261 14 43 477 12 416 5.68e-52 181
MS.gene26819.t1 AT1G73300 29.176 449 261 14 43 477 36 441 6.97e-52 182
MS.gene26819.t1 AT1G73300 29.176 449 261 14 43 477 36 441 6.97e-52 182
MS.gene26819.t1 AT1G33540 29.386 456 284 13 40 477 29 464 7.83e-52 182
MS.gene26819.t1 AT3G12203 30.180 444 262 13 43 477 33 437 9.67e-52 181
MS.gene26819.t1 AT2G23000 28.285 449 275 12 40 477 25 437 1.29e-51 181
MS.gene26819.t1 AT2G23000 28.285 449 275 12 40 477 25 437 1.29e-51 181
MS.gene26819.t1 AT2G22980 28.153 444 268 12 43 477 29 430 3.69e-51 179
MS.gene26819.t1 AT3G10450 30.858 431 247 13 58 477 4 394 9.15e-51 177
MS.gene26819.t1 AT5G36180 29.204 452 263 14 40 477 33 441 2.41e-50 177
MS.gene26819.t1 AT1G33540 28.995 438 273 13 58 477 4 421 1.34e-49 175
MS.gene26819.t1 AT3G10410 27.891 441 267 13 45 472 90 492 3.32e-49 176
MS.gene26819.t1 AT2G22920 29.557 406 241 9 43 439 28 397 6.78e-49 173
MS.gene26819.t1 AT2G22970 28.979 421 251 12 43 453 28 410 1.43e-48 173
MS.gene26819.t1 AT1G73310 28.859 447 265 15 43 477 36 441 2.02e-48 172
MS.gene26819.t1 AT2G22980 28.162 419 251 11 43 452 29 406 2.93e-48 171
MS.gene26819.t1 AT2G22970 28.810 420 251 12 43 452 28 409 3.29e-48 171
MS.gene26819.t1 AT3G12203 30.144 418 244 14 69 477 1 379 3.35e-48 170
MS.gene26819.t1 AT3G10450 30.425 424 245 12 40 452 29 413 5.58e-48 171
MS.gene26819.t1 AT2G22980 27.869 427 258 11 43 460 29 414 9.34e-48 171
MS.gene26819.t1 AT2G23010 26.763 482 291 14 11 477 3 437 1.07e-47 171
MS.gene26819.t1 AT2G23010 26.556 482 292 14 11 477 3 437 4.37e-47 169
MS.gene26819.t1 AT5G09640 26.800 500 308 16 1 477 1 465 4.79e-47 169
MS.gene26819.t1 AT1G73290 30.025 403 239 12 43 439 35 400 2.02e-46 166
MS.gene26819.t1 AT3G12220 28.795 448 270 11 40 477 27 435 3.28e-46 166
MS.gene26819.t1 AT3G10450 30.542 406 232 12 58 452 4 370 1.07e-45 164
MS.gene26819.t1 AT5G22980 27.563 439 271 15 47 474 91 493 1.93e-45 166
MS.gene26819.t1 AT3G12230 29.018 448 269 14 40 477 27 435 1.09e-44 162
MS.gene26819.t1 AT3G12220 28.605 430 258 11 58 477 15 405 3.67e-44 160
MS.gene26819.t1 AT1G73310 28.993 407 238 12 43 438 36 402 5.45e-44 160
MS.gene26819.t1 AT3G12240 28.444 450 269 14 40 477 28 436 7.50e-44 160
MS.gene26819.t1 AT2G22920 34.733 262 160 5 43 296 28 286 4.65e-42 152
MS.gene26819.t1 AT1G73280 32.423 293 184 7 15 296 5 294 2.47e-41 152
MS.gene26819.t1 AT2G22970 33.206 262 163 6 43 296 28 285 2.48e-39 145
MS.gene26819.t1 AT1G73290 36.818 220 131 4 43 257 35 251 3.44e-39 144
MS.gene26819.t1 AT2G22980 33.077 260 156 6 43 292 29 280 5.90e-38 142
MS.gene26819.t1 AT2G22990 27.195 353 218 10 129 477 2 319 1.12e-36 138
MS.gene26819.t1 AT1G15000 27.315 432 262 14 56 477 37 426 2.33e-36 140
MS.gene26819.t1 AT2G22990 26.912 353 219 10 129 477 2 319 4.88e-36 136
MS.gene26819.t1 AT1G73280 27.473 364 223 11 118 477 13 339 4.92e-35 134
MS.gene26819.t1 AT3G12220 34.978 223 135 5 40 256 27 245 1.54e-32 128
MS.gene26819.t1 AT1G73280 27.350 351 214 11 131 477 1 314 4.11e-32 125
MS.gene26819.t1 AT5G36180 27.100 369 218 12 118 477 13 339 1.22e-31 124
MS.gene26819.t1 AT5G36180 27.100 369 218 12 118 477 13 339 1.22e-31 124
MS.gene26819.t1 AT5G22960 35.196 179 93 4 39 217 19 174 1.40e-27 109
MS.gene26819.t1 AT2G22980 25.305 328 201 9 129 452 2 289 3.68e-27 111
MS.gene26819.t1 AT5G36180 26.453 344 203 11 118 452 13 315 4.46e-27 111
MS.gene26819.t1 AT5G36180 26.171 363 212 11 118 467 13 332 2.74e-26 109
MS.gene26819.t1 AT1G73310 26.606 327 195 11 118 438 13 300 1.12e-25 107
MS.gene26819.t1 AT2G27920 23.583 441 283 16 57 468 37 452 3.77e-19 90.5
MS.gene26819.t1 AT2G22960 30.469 128 85 3 351 477 60 184 3.39e-13 68.6

Find 100 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACCTTTATTAATCTTAA+AGG 0.112312 8.2:+10738432 MS.gene26819:CDS
TCATAGTAATCTTCAGTTTC+TGG 0.116767 8.2:-10738832 None:intergenic
CCAGAGAAGGAGAGGTTTAT+TGG 0.191451 8.2:-10737231 None:intergenic
AAACCTTGATTCCAAGAGTA+TGG 0.242904 8.2:-10737658 None:intergenic
ATGTTAGTCCTTCACCATTT+TGG 0.253170 8.2:-10737630 None:intergenic
TCTACCTTGGAAAATGATTC+AGG 0.260931 8.2:-10739081 None:intergenic
CTTATTCATTCTTTCCTAAC+TGG 0.264101 8.2:+10740781 MS.gene26819:CDS
CCTACAATTTCTTGGTGAAT+TGG 0.271062 8.2:+10738050 MS.gene26819:CDS
CGATATTGTGTTGAGGCTTT+AGG 0.279075 8.2:+10740072 MS.gene26819:CDS
GCCTTAAGATATGGATTTAC+AGG 0.283869 8.2:+10739610 MS.gene26819:CDS
TTTGATGAGTTTGGTGTAGA+TGG 0.323218 8.2:-10739583 None:intergenic
TAACCTGAAAAGTGTGAAAT+TGG 0.324453 8.2:-10737140 None:intergenic
AAAACCTTTAAGATTAATAA+AGG 0.334038 8.2:-10738436 None:intergenic
AAGGCCACCTTTGATGAGTT+TGG 0.339294 8.2:-10739592 None:intergenic
TGAGGATGCCTACAATTTCT+TGG 0.340044 8.2:+10738042 MS.gene26819:CDS
GATCTCCAAGTAGACTTTAG+AGG 0.351455 8.2:-10740099 None:intergenic
CCAATAAACCTCTCCTTCTC+TGG 0.363351 8.2:+10737231 MS.gene26819:CDS
AATAGAGGACCTGATTATTA+TGG 0.363598 8.2:-10740128 None:intergenic
GGATGCTCCTCAATTGGATA+TGG 0.380521 8.2:+10737574 MS.gene26819:CDS
TCAAAGGTGGCCTTAAGATA+TGG 0.384822 8.2:+10739601 MS.gene26819:CDS
AGAAGCAAATTTGTTATTTG+TGG 0.388540 8.2:+10737844 MS.gene26819:intron
GATGATCATGGACGTATAGT+AGG 0.395363 8.2:-10740814 None:intergenic
AACCCATACTCTTGGAATCA+AGG 0.399186 8.2:+10737655 MS.gene26819:CDS
GAAGTTGTAAGTCCTCAATA+TGG 0.403385 8.2:-10739541 None:intergenic
TTAAAACAAAGAAACATATT+AGG 0.406269 8.2:-10737019 None:intergenic
CCAATTCACCAAGAAATTGT+AGG 0.412556 8.2:-10738050 None:intergenic
GCAGGTTGGAGGAAGGATAG+TGG 0.413209 8.2:+10740678 MS.gene26819:intron
TAAAGTCTACTTGGAGATCT+TGG 0.417999 8.2:+10740103 MS.gene26819:CDS
ACCTGTAAATCCATATCTTA+AGG 0.420489 8.2:-10739611 None:intergenic
GGACCTGGATGCTCCTCAAT+TGG 0.424061 8.2:+10737568 MS.gene26819:intron
CCTCTCCTTCTCTGGCTCAA+TGG 0.426524 8.2:+10737239 MS.gene26819:CDS
GATGGCAGACTACCTGTGAT+AGG 0.427462 8.2:+10740045 MS.gene26819:CDS
GACTCCATGCATATTCTAGA+AGG 0.432732 8.2:-10738864 None:intergenic
AGTGAGATCAGAAGAGGTAT+TGG 0.440147 8.2:-10737897 None:intergenic
TATCAATTTCTGAGTAATCA+TGG 0.448420 8.2:-10738990 None:intergenic
CAAAGAAACATATTAGGAAC+TGG 0.455768 8.2:-10737013 None:intergenic
CTTCAAAGAACCAATAGAAA+AGG 0.464372 8.2:-10737193 None:intergenic
ATCTTGGTACCATAATAATC+AGG 0.468032 8.2:+10740119 MS.gene26819:CDS
GACTACCTCTAAAGTCTACT+TGG 0.468519 8.2:+10740094 MS.gene26819:CDS
TAACATTCAACCCATACTCT+TGG 0.474372 8.2:+10737647 MS.gene26819:CDS
TATGGTGCTGTTGTTGAGAT+AGG 0.477166 8.2:+10737592 MS.gene26819:CDS
ATCACTGTCAATGAAGATCA+TGG 0.479403 8.2:+10737164 MS.gene26819:CDS
GTGGAGTCACCCATTGGAGT+TGG 0.482769 8.2:+10737863 MS.gene26819:CDS
ATGGTCTAATGAGTGCAATC+AGG 0.483081 8.2:+10738951 MS.gene26819:CDS
TAGGGAGATGATCTCCAGTT+AGG 0.484012 8.2:-10740795 None:intergenic
TTATTTGTGGAGTCACCCAT+TGG 0.489508 8.2:+10737857 MS.gene26819:CDS
GGAAGGATAGTGGAGTATGA+AGG 0.491007 8.2:+10740688 MS.gene26819:CDS
GATTTCCACAGTTTAAATCC+AGG 0.503025 8.2:+10738080 MS.gene26819:CDS
TATCCAATTGAGGAGCATCC+AGG 0.510961 8.2:-10737571 None:intergenic
GCCTCAGTTGGTTTGTTGAG+AGG 0.512490 8.2:-10740751 None:intergenic
CTGCAAGCTGAGGGATATAG+TGG 0.516994 8.2:-10738374 None:intergenic
TTCAAAGAACCAATAGAAAA+GGG 0.520725 8.2:-10737192 None:intergenic
CTACCTTGGAAAATGATTCA+GGG 0.521127 8.2:-10739080 None:intergenic
ATAGCAGGAGAAAGCTATGC+TGG 0.522630 8.2:+10738112 MS.gene26819:CDS
AAAGCATCTGAAATAAATGT+TGG 0.522670 8.2:+10737065 MS.gene26819:CDS
AGAAGGAGAGGTTTATTGGA+GGG 0.531052 8.2:-10737227 None:intergenic
AACCTTGATTCCAAGAGTAT+GGG 0.534967 8.2:-10737657 None:intergenic
ATGAATGGAATGCAGGTTGG+AGG 0.537003 8.2:+10740667 MS.gene26819:intron
AAGAAAACAATAACATAGCA+TGG 0.541066 8.2:+10739406 MS.gene26819:CDS
ATTTCCACAGTTTAAATCCA+GGG 0.543200 8.2:+10738081 MS.gene26819:CDS
AAACAATAACATAGCATGGA+AGG 0.547773 8.2:+10739410 MS.gene26819:CDS
CTCCTTCTCTGGCTCAATGG+AGG 0.548120 8.2:+10737242 MS.gene26819:CDS
ATGGAATGCAGGTTGGAGGA+AGG 0.549335 8.2:+10740671 MS.gene26819:intron
TATGTGACAGTGAGAGGAGC+TGG 0.554988 8.2:+10740718 MS.gene26819:CDS
TGAGTTTGGTGTAGATGGGC+AGG 0.558897 8.2:-10739578 None:intergenic
ATGATCATGGACGTATAGTA+GGG 0.561185 8.2:-10740813 None:intergenic
TTAGTCAACCAAAATGGTGA+AGG 0.569534 8.2:+10737622 MS.gene26819:CDS
AAGATTAACTCTGCAAGCTG+AGG 0.573791 8.2:-10738384 None:intergenic
AAGGCCTTCTAGAATATGCA+TGG 0.576001 8.2:+10738860 MS.gene26819:CDS
GGTGGTGTCGAAGGTTGTCC+TGG 0.577699 8.2:-10737119 None:intergenic
CCTGAAAAGTGTGAAATTGG+TGG 0.577902 8.2:-10737137 None:intergenic
TTGATGAGTTTGGTGTAGAT+GGG 0.579382 8.2:-10739582 None:intergenic
GAGAAGGAGAGGTTTATTGG+AGG 0.580591 8.2:-10737228 None:intergenic
CCATTGAGCCAGAGAAGGAG+AGG 0.585851 8.2:-10737239 None:intergenic
TTGACATATGTGACAGTGAG+AGG 0.587941 8.2:+10740712 MS.gene26819:CDS
TGTGAAATTGGTGGTGTCGA+AGG 0.589267 8.2:-10737128 None:intergenic
TAAAATAGTGAGATCAGAAG+AGG 0.589307 8.2:-10737903 None:intergenic
AACAGCACCATATCCAATTG+AGG 0.590506 8.2:-10737581 None:intergenic
AGATTAACTCTGCAAGCTGA+GGG 0.592878 8.2:-10738383 None:intergenic
CAATATCGTGTCCCTATCAC+AGG 0.593552 8.2:-10740057 None:intergenic
TCACTGTCAATGAAGATCAT+GGG 0.594629 8.2:+10737165 MS.gene26819:CDS
CACCTCCATTGAGCCAGAGA+AGG 0.598697 8.2:-10737244 None:intergenic
TGCTTTAATGAACAATGAAG+TGG 0.601083 8.2:-10737048 None:intergenic
ATGGCAGACTACCTGTGATA+GGG 0.603092 8.2:+10740046 MS.gene26819:CDS
AGTGAGAGGAGCTGGTCACT+TGG 0.603748 8.2:+10740726 MS.gene26819:CDS
GTACTGTTTGAATGACATGC+TGG 0.606307 8.2:-10739030 None:intergenic
AAGTCCCTGGATTTAAACTG+TGG 0.613586 8.2:-10738085 None:intergenic
ATAAGAGAGAGAGCCTCAGT+TGG 0.632043 8.2:-10740763 None:intergenic
GAAGATTACTATGACAACAA+AGG 0.634842 8.2:+10738841 MS.gene26819:CDS
CTGTCAATGAAGATCATGGG+AGG 0.639911 8.2:+10737168 MS.gene26819:CDS
AAAATGATTATAGAATGAAG+AGG 0.640286 8.2:+10739283 MS.gene26819:CDS
ATTAATAGTGGAGATGCAGA+TGG 0.641384 8.2:+10740027 MS.gene26819:intron
GCCTCTCAACAAACCAACTG+AGG 0.642126 8.2:+10740750 MS.gene26819:CDS
ATCTACACCAAACTCATCAA+AGG 0.646779 8.2:+10739585 MS.gene26819:CDS
TCTGCATATGTGGAATAACA+AGG 0.650025 8.2:-10739330 None:intergenic
TGTCAATGAAGATCATGGGA+GGG 0.660889 8.2:+10737169 MS.gene26819:CDS
TACACCAAACTCATCAAAGG+TGG 0.666201 8.2:+10739588 MS.gene26819:CDS
ATTATTTGTTACTGTCACTG+AGG 0.669384 8.2:-10739055 None:intergenic
AGGGACACGATATTGTGTTG+AGG 0.672514 8.2:+10740065 MS.gene26819:CDS
GATAGAATAAGTGATCTACC+AGG 0.720379 8.2:+10737101 MS.gene26819:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATAATTAATTTTTTTAA+AGG + chr8.2:10740392-10740411 MS.gene26819:intron 0.0%
!! AAAAAATAAAAATCATTTAG+GGG - chr8.2:10738800-10738819 None:intergenic 10.0%
!! GAAAAAATAAAAATCATTTA+GGG - chr8.2:10738801-10738820 None:intergenic 10.0%
!! TGAAAAAATAAAAATCATTT+AGG - chr8.2:10738802-10738821 None:intergenic 10.0%
!! TTAATTAAGAATTTATACAA+TGG - chr8.2:10740165-10740184 None:intergenic 10.0%
!!! TAAATGATTTTTATTTTTTC+AGG + chr8.2:10738801-10738820 MS.gene26819:intron 10.0%
!!! TAGTTTGTAATTAAATATTA+CGG - chr8.2:10738011-10738030 None:intergenic 10.0%
!!! TATCTTTTTTTTTTTTTTGA+GGG + chr8.2:10739755-10739774 MS.gene26819:intron 10.0%
!!! TTAAATTCTAAAATTAATAG+AGG + chr8.2:10739877-10739896 MS.gene26819:intron 10.0%
!! AAATAAAGAATGGAAAATTA+AGG + chr8.2:10738484-10738503 MS.gene26819:intron 15.0%
!! AATAATTAATTTCAACTAAG+AGG + chr8.2:10740419-10740438 MS.gene26819:intron 15.0%
!! ATACTTCATAGTAAAAAATT+GGG - chr8.2:10737694-10737713 None:intergenic 15.0%
!! TAAAAATAAGTATTAAGTCT+CGG - chr8.2:10737447-10737466 None:intergenic 15.0%
!! TATACTTCATAGTAAAAAAT+TGG - chr8.2:10737695-10737714 None:intergenic 15.0%
!! TTAAAACAAAGAAACATATT+AGG - chr8.2:10737022-10737041 None:intergenic 15.0%
!! TTATTATTAGTAAATGTTAG+TGG + chr8.2:10737314-10737333 MS.gene26819:intron 15.0%
!!! AAAACCTTTAAGATTAATAA+AGG - chr8.2:10738439-10738458 None:intergenic 15.0%
!!! AACATATAGTTTTTTATGTA+TGG + chr8.2:10737468-10737487 MS.gene26819:intron 15.0%
!!! ATAGAATAAAGTATCAATTA+AGG - chr8.2:10739467-10739486 None:intergenic 15.0%
!!! CTATCTTTTTTTTTTTTTTG+AGG + chr8.2:10739754-10739773 MS.gene26819:intron 15.0%
!!! TAATTTTCCATTCTTTATTT+TGG - chr8.2:10738484-10738503 None:intergenic 15.0%
!!! TAGAATAAAGTATCAATTAA+GGG - chr8.2:10739466-10739485 None:intergenic 15.0%
!! AAAATGATTATAGAATGAAG+AGG + chr8.2:10739283-10739302 MS.gene26819:CDS 20.0%
!! AAAATGCATTTATGACTTTA+TGG + chr8.2:10739844-10739863 MS.gene26819:intron 20.0%
!! AAATAGTTGCAATAAAAATG+TGG - chr8.2:10738348-10738367 None:intergenic 20.0%
!! AACACCTTTATTAATCTTAA+AGG + chr8.2:10738432-10738451 MS.gene26819:CDS 20.0%
!! GTAAAAATACACAATCTATA+TGG - chr8.2:10739735-10739754 None:intergenic 20.0%
!! TAAATAAATATGACTAGAGT+TGG - chr8.2:10737504-10737523 None:intergenic 20.0%
!! TATATATCTATTCAGTCTTA+AGG - chr8.2:10739680-10739699 None:intergenic 20.0%
!!! ACAATATTTGTTTAAGTTAG+AGG + chr8.2:10739237-10739256 MS.gene26819:intron 20.0%
!!! AGCTTTCTTAAATAGTTTTT+AGG - chr8.2:10738594-10738613 None:intergenic 20.0%
!!! CAATATTTGTTTAAGTTAGA+GGG + chr8.2:10739238-10739257 MS.gene26819:intron 20.0%
!!! GATTTTTATTTTTTCAGGTA+GGG + chr8.2:10738806-10738825 MS.gene26819:intron 20.0%
!!! TGATTTTTATTTTTTCAGGT+AGG + chr8.2:10738805-10738824 MS.gene26819:intron 20.0%
!!! TTGAAAAAGTATTATGAAAG+AGG - chr8.2:10737392-10737411 None:intergenic 20.0%
!!! TTTTATTGCAACTATTTTTC+AGG + chr8.2:10738351-10738370 MS.gene26819:intron 20.0%
! AAGAAAACAATAACATAGCA+TGG + chr8.2:10739406-10739425 MS.gene26819:CDS 25.0%
! AATACACAATCTATATGGTT+AGG - chr8.2:10739730-10739749 None:intergenic 25.0%
! ACTGAAAAATTAGACATAGA+TGG - chr8.2:10739517-10739536 None:intergenic 25.0%
! ATAAGGATCCATATTGTTTA+TGG + chr8.2:10739805-10739824 MS.gene26819:intron 25.0%
! ATAGAATTGTTAGTAGCTTT+CGG + chr8.2:10739911-10739930 MS.gene26819:intron 25.0%
! ATGGAAAATTAAGGAGATTA+AGG + chr8.2:10738493-10738512 MS.gene26819:intron 25.0%
! ATGGCAAAAAAGATAAATAG+AGG - chr8.2:10740146-10740165 None:intergenic 25.0%
! CAACTAAGAGGTAAAATTAA+GGG + chr8.2:10740431-10740450 MS.gene26819:intron 25.0%
! CTATCTCATCTTTATAGATA+AGG + chr8.2:10739788-10739807 MS.gene26819:intron 25.0%
! GTATGAATTTATTAGCAACA+TGG + chr8.2:10737353-10737372 MS.gene26819:intron 25.0%
! GTGTTATAAAAAAGTGATTC+TGG - chr8.2:10738755-10738774 None:intergenic 25.0%
! TACTCTAAATTAATGTCGTT+AGG + chr8.2:10739650-10739669 MS.gene26819:intron 25.0%
! TATCAATTTCTGAGTAATCA+TGG - chr8.2:10738993-10739012 None:intergenic 25.0%
! TCAACTAAGAGGTAAAATTA+AGG + chr8.2:10740430-10740449 MS.gene26819:intron 25.0%
! TCCTTAACCAAAATAAAGAA+TGG + chr8.2:10738474-10738493 MS.gene26819:intron 25.0%
! TTCAAAGAACCAATAGAAAA+GGG - chr8.2:10737195-10737214 None:intergenic 25.0%
!! AAAGCATCTGAAATAAATGT+TGG + chr8.2:10737065-10737084 MS.gene26819:CDS 25.0%
!! ATTCTTTTTGCAGCATTTAT+TGG - chr8.2:10737782-10737801 None:intergenic 25.0%
!! GTGATTTTAAACAATCTCAA+TGG + chr8.2:10738932-10738951 MS.gene26819:CDS 25.0%
!! TAAGACTTAATGGATATGAA+TGG + chr8.2:10740652-10740671 MS.gene26819:intron 25.0%
!! TTTAAGTTAGAGGGAAAATT+TGG + chr8.2:10739247-10739266 MS.gene26819:intron 25.0%
!!! AGAAAATTTTGAGTTTACAG+CGG - chr8.2:10740626-10740645 None:intergenic 25.0%
!!! AGAAGCAAATTTGTTATTTG+TGG + chr8.2:10737844-10737863 MS.gene26819:intron 25.0%
!!! ATTTTAGAGGATCATTTTGT+AGG + chr8.2:10737920-10737939 MS.gene26819:CDS 25.0%
!!! TCCATTCTTTATTTTGGTTA+AGG - chr8.2:10738478-10738497 None:intergenic 25.0%
AAACAATAACATAGCATGGA+AGG + chr8.2:10739410-10739429 MS.gene26819:CDS 30.0%
AATAGAGGACCTGATTATTA+TGG - chr8.2:10740131-10740150 None:intergenic 30.0%
ACCTGTAAATCCATATCTTA+AGG - chr8.2:10739614-10739633 None:intergenic 30.0%
AGTATTATGAAAGAGGTTCA+AGG - chr8.2:10737385-10737404 None:intergenic 30.0%
ATAAGTATTAAGTCTCGGAA+AGG - chr8.2:10737442-10737461 None:intergenic 30.0%
ATCTTGGTACCATAATAATC+AGG + chr8.2:10740119-10740138 MS.gene26819:CDS 30.0%
ATTTCCACAGTTTAAATCCA+GGG + chr8.2:10738081-10738100 MS.gene26819:CDS 30.0%
CAAAGAAACATATTAGGAAC+TGG - chr8.2:10737016-10737035 None:intergenic 30.0%
CACTATTAATTCATTCCACA+AGG - chr8.2:10740017-10740036 None:intergenic 30.0%
CCATAATCAAGCTAGTAAAA+AGG + chr8.2:10740529-10740548 MS.gene26819:intron 30.0%
CTTATTCATTCTTTCCTAAC+TGG + chr8.2:10740781-10740800 MS.gene26819:CDS 30.0%
CTTCAAAGAACCAATAGAAA+AGG - chr8.2:10737196-10737215 None:intergenic 30.0%
CTTGTGGAATGAATTAATAG+TGG + chr8.2:10740015-10740034 MS.gene26819:intron 30.0%
GAAAAATTCTTCTGCATATG+TGG - chr8.2:10739343-10739362 None:intergenic 30.0%
GAAGATTACTATGACAACAA+AGG + chr8.2:10738841-10738860 MS.gene26819:CDS 30.0%
TAAAATAGTGAGATCAGAAG+AGG - chr8.2:10737906-10737925 None:intergenic 30.0%
TAAGAAAAACCAACTCCAAT+GGG - chr8.2:10737875-10737894 None:intergenic 30.0%
TCATAGTAATCTTCAGTTTC+TGG - chr8.2:10738835-10738854 None:intergenic 30.0%
TCATATCCATTAAGTCTTAG+AGG - chr8.2:10740651-10740670 None:intergenic 30.0%
TGCTTTAATGAACAATGAAG+TGG - chr8.2:10737051-10737070 None:intergenic 30.0%
TGTAATGTTGCCTTTGAATT+AGG + chr8.2:10737547-10737566 MS.gene26819:intron 30.0%
TTTATTGGCACAGCAATAAT+TGG - chr8.2:10737767-10737786 None:intergenic 30.0%
! ATGAAGAGGATGAGAATTTT+TGG + chr8.2:10739297-10739316 MS.gene26819:CDS 30.0%
! ATTATTTGTTACTGTCACTG+AGG - chr8.2:10739058-10739077 None:intergenic 30.0%
! TAACCTGAAAAGTGTGAAAT+TGG - chr8.2:10737143-10737162 None:intergenic 30.0%
! TGAAGAGGATGAGAATTTTT+GGG + chr8.2:10739298-10739317 MS.gene26819:CDS 30.0%
! TTTTCAGTGATTCCATATTG+AGG + chr8.2:10739529-10739548 MS.gene26819:intron 30.0%
!! ATGCAGAAGAATTTTTCAAC+AGG + chr8.2:10739346-10739365 MS.gene26819:CDS 30.0%
!! ATGTTAGTGGTTAATTTGCT+AGG + chr8.2:10737327-10737346 MS.gene26819:intron 30.0%
!! CAAAATAGCTTCTGCTATTT+TGG + chr8.2:10738692-10738711 MS.gene26819:intron 30.0%
!! CCTTTTTACTAGCTTGATTA+TGG - chr8.2:10740532-10740551 None:intergenic 30.0%
!! TGCAGAAGAATTTTTCAACA+GGG + chr8.2:10739347-10739366 MS.gene26819:CDS 30.0%
!! TGTTAGTGGTTAATTTGCTA+GGG + chr8.2:10737328-10737347 MS.gene26819:intron 30.0%
!! TTCTGATCTCACTATTTTAG+AGG + chr8.2:10737907-10737926 MS.gene26819:CDS 30.0%
AAACCTTGATTCCAAGAGTA+TGG - chr8.2:10737661-10737680 None:intergenic 35.0%
AACTTCTCAATCTATGCCAA+TGG + chr8.2:10737410-10737429 MS.gene26819:intron 35.0%
AATGGATATGAATGGAATGC+AGG + chr8.2:10740660-10740679 MS.gene26819:intron 35.0%
AGGGAAAATTTGGTTATTGC+AGG + chr8.2:10739257-10739276 MS.gene26819:intron 35.0%
ATCACTGTCAATGAAGATCA+TGG + chr8.2:10737164-10737183 MS.gene26819:CDS 35.0%
ATCTACACCAAACTCATCAA+AGG + chr8.2:10739585-10739604 MS.gene26819:CDS 35.0%
CACTTGGTCCATAAACAATA+TGG - chr8.2:10739816-10739835 None:intergenic 35.0%
CCAATTCACCAAGAAATTGT+AGG - chr8.2:10738053-10738072 None:intergenic 35.0%
CCTACAATTTCTTGGTGAAT+TGG + chr8.2:10738050-10738069 MS.gene26819:CDS 35.0%
CTACCTTGGAAAATGATTCA+GGG - chr8.2:10739083-10739102 None:intergenic 35.0%
GAAGTTGTAAGTCCTCAATA+TGG - chr8.2:10739544-10739563 None:intergenic 35.0%
GAGAATGAGGAAAATTACAG+TGG + chr8.2:10740273-10740292 MS.gene26819:intron 35.0%
GAGTTACTTGATTGAGTTTG+TGG + chr8.2:10740305-10740324 MS.gene26819:intron 35.0%
GATAGAATAAGTGATCTACC+AGG + chr8.2:10737101-10737120 MS.gene26819:CDS 35.0%
GATTTCCACAGTTTAAATCC+AGG + chr8.2:10738080-10738099 MS.gene26819:CDS 35.0%
GCCTTAAGATATGGATTTAC+AGG + chr8.2:10739610-10739629 MS.gene26819:CDS 35.0%
GTAAGAAAAACCAACTCCAA+TGG - chr8.2:10737876-10737895 None:intergenic 35.0%
GTATGTTTGTTTGTACCTTG+TGG + chr8.2:10739999-10740018 MS.gene26819:intron 35.0%
GTGACATTAGTTATCTACCT+TGG - chr8.2:10739097-10739116 None:intergenic 35.0%
TAAAGTCTACTTGGAGATCT+TGG + chr8.2:10740103-10740122 MS.gene26819:CDS 35.0%
TAACATTCAACCCATACTCT+TGG + chr8.2:10737647-10737666 MS.gene26819:CDS 35.0%
TAGATACACATTGCACATAC+AGG - chr8.2:10738214-10738233 None:intergenic 35.0%
TCACTGTCAATGAAGATCAT+GGG + chr8.2:10737165-10737184 MS.gene26819:CDS 35.0%
TCTACCTTGGAAAATGATTC+AGG - chr8.2:10739084-10739103 None:intergenic 35.0%
TCTGCATATGTGGAATAACA+AGG - chr8.2:10739333-10739352 None:intergenic 35.0%
TTAGTCAACCAAAATGGTGA+AGG + chr8.2:10737622-10737641 MS.gene26819:CDS 35.0%
! AACCTTGATTCCAAGAGTAT+GGG - chr8.2:10737660-10737679 None:intergenic 35.0%
! ATGTTAGTCCTTCACCATTT+TGG - chr8.2:10737633-10737652 None:intergenic 35.0%
! ATTAATAGTGGAGATGCAGA+TGG + chr8.2:10740027-10740046 MS.gene26819:intron 35.0%
! CATTTAGGGGTGCATATTTA+GGG - chr8.2:10738787-10738806 None:intergenic 35.0%
! CCTCTTTTAGTCAACCAAAA+TGG + chr8.2:10737616-10737635 MS.gene26819:CDS 35.0%
! GAAGAGGATGAGAATTTTTG+GGG + chr8.2:10739299-10739318 MS.gene26819:CDS 35.0%
! GTTTTGCTTTGTCATATTGC+TGG - chr8.2:10738906-10738925 None:intergenic 35.0%
! TCATTTAGGGGTGCATATTT+AGG - chr8.2:10738788-10738807 None:intergenic 35.0%
! TGCATTTTTCACTTTGCACT+TGG - chr8.2:10739832-10739851 None:intergenic 35.0%
!! AAGAGGATGAGAATTTTTGG+GGG + chr8.2:10739300-10739319 MS.gene26819:CDS 35.0%
!! GTTAGTGGTTAATTTGCTAG+GGG + chr8.2:10737329-10737348 MS.gene26819:intron 35.0%
!! TTCTCTCCTCTAAGACTTAA+TGG + chr8.2:10740642-10740661 MS.gene26819:intron 35.0%
!! TTGATGAGTTTGGTGTAGAT+GGG - chr8.2:10739585-10739604 None:intergenic 35.0%
!! TTTGATGAGTTTGGTGTAGA+TGG - chr8.2:10739586-10739605 None:intergenic 35.0%
!!! CCATTTTGGTTGACTAAAAG+AGG - chr8.2:10737619-10737638 None:intergenic 35.0%
!!! CGCATTTTGATTAGAGAATG+AGG + chr8.2:10740260-10740279 MS.gene26819:intron 35.0%
AACAGCACCATATCCAATTG+AGG - chr8.2:10737584-10737603 None:intergenic 40.0%
AACCCATACTCTTGGAATCA+AGG + chr8.2:10737655-10737674 MS.gene26819:CDS 40.0%
AAGATTAACTCTGCAAGCTG+AGG - chr8.2:10738387-10738406 None:intergenic 40.0%
AAGTCCCTGGATTTAAACTG+TGG - chr8.2:10738088-10738107 None:intergenic 40.0%
AGAAGGAGAGGTTTATTGGA+GGG - chr8.2:10737230-10737249 None:intergenic 40.0%
AGATTAACTCTGCAAGCTGA+GGG - chr8.2:10738386-10738405 None:intergenic 40.0%
ATGGTCTAATGAGTGCAATC+AGG + chr8.2:10738951-10738970 MS.gene26819:CDS 40.0%
CAAACTACTTGAATCAGCTG+AGG + chr8.2:10738024-10738043 MS.gene26819:intron 40.0%
CACGCCTCAATATGAAGTAT+CGG - chr8.2:10738190-10738209 None:intergenic 40.0%
CGATATTGTGTTGAGGCTTT+AGG + chr8.2:10740072-10740091 MS.gene26819:CDS 40.0%
GACTCCATGCATATTCTAGA+AGG - chr8.2:10738867-10738886 None:intergenic 40.0%
GATATGAATGGAATGCAGGT+TGG + chr8.2:10740664-10740683 MS.gene26819:intron 40.0%
GATCTCCAAGTAGACTTTAG+AGG - chr8.2:10740102-10740121 None:intergenic 40.0%
GTACTGTTTGAATGACATGC+TGG - chr8.2:10739033-10739052 None:intergenic 40.0%
GTTAGTAGCTTTCGGTGAAA+GGG + chr8.2:10739919-10739938 MS.gene26819:intron 40.0%
TACACCAAACTCATCAAAGG+TGG + chr8.2:10739588-10739607 MS.gene26819:CDS 40.0%
TGAGGATGCCTACAATTTCT+TGG + chr8.2:10738042-10738061 MS.gene26819:CDS 40.0%
TGTCAATGAAGATCATGGGA+GGG + chr8.2:10737169-10737188 MS.gene26819:CDS 40.0%
TGTTAGTAGCTTTCGGTGAA+AGG + chr8.2:10739918-10739937 MS.gene26819:intron 40.0%
TTATTTGTGGAGTCACCCAT+TGG + chr8.2:10737857-10737876 MS.gene26819:CDS 40.0%
TTGACATATGTGACAGTGAG+AGG + chr8.2:10740712-10740731 MS.gene26819:CDS 40.0%
! AGTGAGATCAGAAGAGGTAT+TGG - chr8.2:10737900-10737919 None:intergenic 40.0%
! CCACCAATTTCACACTTTTC+AGG + chr8.2:10737137-10737156 MS.gene26819:CDS 40.0%
! CCTGAAAAGTGTGAAATTGG+TGG - chr8.2:10737140-10737159 None:intergenic 40.0%
! GTGAAGCACTAAGACATACA+CGG - chr8.2:10738292-10738311 None:intergenic 40.0%
! TCAAAGGTGGCCTTAAGATA+TGG + chr8.2:10739601-10739620 MS.gene26819:CDS 40.0%
! TGTCCCTGAATCATTTTCCA+AGG + chr8.2:10739077-10739096 MS.gene26819:CDS 40.0%
!! AAGGCCTTCTAGAATATGCA+TGG + chr8.2:10738860-10738879 MS.gene26819:CDS 40.0%
!! AGCACCGATACTTCATATTG+AGG + chr8.2:10738183-10738202 MS.gene26819:intron 40.0%
!! GACTACCTCTAAAGTCTACT+TGG + chr8.2:10740094-10740113 MS.gene26819:CDS 40.0%
!! TATGGTGCTGTTGTTGAGAT+AGG + chr8.2:10737592-10737611 MS.gene26819:CDS 40.0%
AAGGCCACCTTTGATGAGTT+TGG - chr8.2:10739595-10739614 None:intergenic 45.0%
AGGGACACGATATTGTGTTG+AGG + chr8.2:10740065-10740084 MS.gene26819:CDS 45.0%
ATAAGAGAGAGAGCCTCAGT+TGG - chr8.2:10740766-10740785 None:intergenic 45.0%
ATAGCAGGAGAAAGCTATGC+TGG + chr8.2:10738112-10738131 MS.gene26819:CDS 45.0%
ATGGCAGACTACCTGTGATA+GGG + chr8.2:10740046-10740065 MS.gene26819:CDS 45.0%
CAATATCGTGTCCCTATCAC+AGG - chr8.2:10740060-10740079 None:intergenic 45.0%
CCAATAAACCTCTCCTTCTC+TGG + chr8.2:10737231-10737250 MS.gene26819:CDS 45.0%
CCAGAGAAGGAGAGGTTTAT+TGG - chr8.2:10737234-10737253 None:intergenic 45.0%
CTGTCAATGAAGATCATGGG+AGG + chr8.2:10737168-10737187 MS.gene26819:CDS 45.0%
GAGAAGGAGAGGTTTATTGG+AGG - chr8.2:10737231-10737250 None:intergenic 45.0%
GCATCCAGGTCCTAATTCAA+AGG - chr8.2:10737560-10737579 None:intergenic 45.0%
GGATGCTCCTCAATTGGATA+TGG + chr8.2:10737574-10737593 MS.gene26819:CDS 45.0%
GTTGCCTTTGAATTAGGACC+TGG + chr8.2:10737553-10737572 MS.gene26819:intron 45.0%
TAGGGAGATGATCTCCAGTT+AGG - chr8.2:10740798-10740817 None:intergenic 45.0%
TCCTGCTATGAAAAAGTCCC+TGG - chr8.2:10738101-10738120 None:intergenic 45.0%
! ATGAATGGAATGCAGGTTGG+AGG + chr8.2:10740667-10740686 MS.gene26819:intron 45.0%
! CTCGGAAAGGTATAGTCCAT+TGG - chr8.2:10737429-10737448 None:intergenic 45.0%
!! GGAAGGATAGTGGAGTATGA+AGG + chr8.2:10740688-10740707 MS.gene26819:CDS 45.0%
!! TATCCAATTGAGGAGCATCC+AGG - chr8.2:10737574-10737593 None:intergenic 45.0%
!! TGTGAAATTGGTGGTGTCGA+AGG - chr8.2:10737131-10737150 None:intergenic 45.0%
!!! TCCAGGGACTTTTTCATAGC+AGG + chr8.2:10738097-10738116 MS.gene26819:CDS 45.0%
CTGCAAGCTGAGGGATATAG+TGG - chr8.2:10738377-10738396 None:intergenic 50.0%
GATGGCAGACTACCTGTGAT+AGG + chr8.2:10740045-10740064 MS.gene26819:CDS 50.0%
GCCTCTCAACAAACCAACTG+AGG + chr8.2:10740750-10740769 MS.gene26819:CDS 50.0%
TATGTGACAGTGAGAGGAGC+TGG + chr8.2:10740718-10740737 MS.gene26819:CDS 50.0%
! ATGGAATGCAGGTTGGAGGA+AGG + chr8.2:10740671-10740690 MS.gene26819:intron 50.0%
! ATGGGAGGGCCCTTTTCTAT+TGG + chr8.2:10737183-10737202 MS.gene26819:CDS 50.0%
!! GCCTCAGTTGGTTTGTTGAG+AGG - chr8.2:10740754-10740773 None:intergenic 50.0%
!! TGAGTTTGGTGTAGATGGGC+AGG - chr8.2:10739581-10739600 None:intergenic 50.0%
AGTGAGAGGAGCTGGTCACT+TGG + chr8.2:10740726-10740745 MS.gene26819:CDS 55.0%
CACCTCCATTGAGCCAGAGA+AGG - chr8.2:10737247-10737266 None:intergenic 55.0%
CCATTGAGCCAGAGAAGGAG+AGG - chr8.2:10737242-10737261 None:intergenic 55.0%
GGACCTGGATGCTCCTCAAT+TGG + chr8.2:10737568-10737587 MS.gene26819:intron 55.0%
GTGGAGTCACCCATTGGAGT+TGG + chr8.2:10737863-10737882 MS.gene26819:CDS 55.0%
! CCTCTCCTTCTCTGGCTCAA+TGG + chr8.2:10737239-10737258 MS.gene26819:CDS 55.0%
! CTCCTTCTCTGGCTCAATGG+AGG + chr8.2:10737242-10737261 MS.gene26819:CDS 55.0%
! GCAGGTTGGAGGAAGGATAG+TGG + chr8.2:10740678-10740697 MS.gene26819:intron 55.0%
! GGTGGTGTCGAAGGTTGTCC+TGG - chr8.2:10737122-10737141 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 10736990 10740831 10736990 ID=MS.gene26819
chr8.2 mRNA 10736990 10740831 10736990 ID=MS.gene26819.t1;Parent=MS.gene26819
chr8.2 exon 10736990 10737263 10736990 ID=MS.gene26819.t1.exon1;Parent=MS.gene26819.t1
chr8.2 CDS 10736990 10737263 10736990 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10737569 10737676 10737569 ID=MS.gene26819.t1.exon2;Parent=MS.gene26819.t1
chr8.2 CDS 10737569 10737676 10737569 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10737846 10737941 10737846 ID=MS.gene26819.t1.exon3;Parent=MS.gene26819.t1
chr8.2 CDS 10737846 10737941 10737846 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10738041 10738133 10738041 ID=MS.gene26819.t1.exon4;Parent=MS.gene26819.t1
chr8.2 CDS 10738041 10738133 10738041 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10738373 10738461 10738373 ID=MS.gene26819.t1.exon5;Parent=MS.gene26819.t1
chr8.2 CDS 10738373 10738461 10738373 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10738823 10739098 10738823 ID=MS.gene26819.t1.exon6;Parent=MS.gene26819.t1
chr8.2 CDS 10738823 10739098 10738823 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10739279 10739439 10739279 ID=MS.gene26819.t1.exon7;Parent=MS.gene26819.t1
chr8.2 CDS 10739279 10739439 10739279 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10739536 10739631 10739536 ID=MS.gene26819.t1.exon8;Parent=MS.gene26819.t1
chr8.2 CDS 10739536 10739631 10739536 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10740035 10740140 10740035 ID=MS.gene26819.t1.exon9;Parent=MS.gene26819.t1
chr8.2 CDS 10740035 10740140 10740035 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
chr8.2 exon 10740682 10740831 10740682 ID=MS.gene26819.t1.exon10;Parent=MS.gene26819.t1
chr8.2 CDS 10740682 10740831 10740682 ID=cds.MS.gene26819.t1;Parent=MS.gene26819.t1
Gene Sequence

>MS.gene26819

ATGAATGTTTTTCTGTTTGTAGTCCAGTTCCTAATATGTTTCTTTGTTTTAACTACTACCACTTCATTGTTCATTAAAGCATCTGAAATAAATGTTGGAAGTTATGAAACTGATAGAATAAGTGATCTACCAGGACAACCTTCGACACCACCAATTTCACACTTTTCAGGTTACATCACTGTCAATGAAGATCATGGGAGGGCCCTTTTCTATTGGTTCTTTGAAGCTCAATCTCAACCCTCCAATAAACCTCTCCTTCTCTGGCTCAATGGAGGTGATCTCTCATCATTTCATTTTTGTAACTAATTATTATTATTATTATTATTATTATTAGTAAATGTTAGTGGTTAATTTGCTAGGGGAGTATGAATTTATTAGCAACATGGATTGAACCTTGAACCTCTTTCATAATACTTTTTCAACTTCTCAATCTATGCCAATGGACTATACCTTTCCGAGACTTAATACTTATTTTTATAACATATAGTTTTTTATGTATGGTTGTAGAGATCCAACTCTAGTCATATTTATTTATTTAGTGATGCTACATTTCATTTTGTAATGTTGCCTTTGAATTAGGACCTGGATGCTCCTCAATTGGATATGGTGCTGTTGTTGAGATAGGACCTCTTTTAGTCAACCAAAATGGTGAAGGACTAACATTCAACCCATACTCTTGGAATCAAGGTTTATATTTTCTTCCCAATTTTTTACTATGAAGTATAGTTTATAGTATATAGTATATGTTTGTCTTGTTTGAGTATCTGTTTGTATCCAATTATTGCTGTGCCAATAAATGCTGCAAAAAGAATAATGATACTAATTTTGCTTACTTGAAAATTGTGAACTTATGCAGAAGCAAATTTGTTATTTGTGGAGTCACCCATTGGAGTTGGTTTTTCTTACACCAATACCTCTTCTGATCTCACTATTTTAGAGGATCATTTTGTAGGTGAGTTTTCATTGTATAAGATAAGATCATCATCTAATCTAATTGTGTTGATTTTGTTAAAAGTCACCGTAATATTTAATTACAAACTACTTGAATCAGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTACAAAGATTTCCACAGTTTAAATCCAGGGACTTTTTCATAGCAGGAGAAAGCTATGCTGGTTAGTTTTATAACTAATTATAACTATGATCTCTTTTCGTCGCAAACTTAGCACCGATACTTCATATTGAGGCGTGTCCTGTATGTGCAATGTGTATCTATATCTCTATTTTCTCAAATTATTTGAGTTATCATGTGTCAGTATCAGTGTTGTGTCCGTGTATGTCTTAGTGCTTCACAGTTCGCTACTAGCATATACTATTGTATAATAACCACATTTTTATTGCAACTATTTTTCAGGCCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGACAGAAACAAAGATAGAAGCAAAAACACCTTTATTAATCTTAAAGGTTTTATTGTAAGTAAATCATCCTTAACCAAAATAAAGAATGGAAAATTAAGGAGATTAAGGACATTTTGTTAGAACTTTTTTTCAAATAAATAATTTTTAGTTCTCATTTATTTGTTATAAATTTTTTGAAATAAACCTAAAAACTATTTAAGAAAGCTATTTTGAACATCTTCTCTTGAAAATTGCATTTGATAGATGATTTTTAAATATTTGACTTTTATCATGACAAACAAACACAAAATAGCTTCTGCTATTTTGGAAAATCTCTAAAAAAATAATCTTTAAATTTTTGAATACCAGAATCACTTTTTTATAACACAACAAACAGCCCTAAATATGCACCCCTAAATGATTTTTATTTTTTCAGGTAGGGAATCCAGAAACTGAAGATTACTATGACAACAAAGGCCTTCTAGAATATGCATGGAGTCATGCAGTTATATCAGACCAGCAATATGACAAAGCAAAACAAGTTTGTGATTTTAAACAATCTCAATGGTCTAATGAGTGCAATCAGGTCATGAGTGAAGTTTTCCATGATTACTCAGAAATTGATATATACAACATTTATGCACCAGCATGTCATTCAAACAGTACATCCTCAGTGACAGTAACAAATAATGTCCCTGAATCATTTTCCAAGGTAGATAACTAATGTCACAAATCTATAGATTCTAAATGATAGCACTGTATTAACTAGTATATATTTGAATTGCATTAAATATTGAAGTTGATATCGAAATTTGATGTTAAATTTGCGTGTCAAAATATCATTTATGAAACAATATTTGTTTAAGTTAGAGGGAAAATTTGGTTATTGCAGGTGAAAAATGATTATAGAATGAAGAGGATGAGAATTTTTGGGGGCTATGATCCTTGTTATTCCACATATGCAGAAGAATTTTTCAACAGGGTAGATGTTCAATCATCTTTTCATGCAAATACTATAAAAGAAAACAATAACATAGCATGGAAGGTTTGCAAGTAAGCACTACAATTTGATAGATCCCTTAATTGATACTTTATTCTATAATCTATATAATATTGAATACTAATTTCCATCTATGTCTAATTTTTCAGTGATTCCATATTGAGGACTTACAACTTCTCTGTTTTTTCTGTCCTGCCCATCTACACCAAACTCATCAAAGGTGGCCTTAAGATATGGATTTACAGGTATATATCTCTTACTTATACTCTAAATTAATGTCGTTAGGATAGCCTTAAGACTGAATAGATATATATTGTGAGTGTAAAAAATGTTTACTTATCCTAACCATATAGATTGTGTATTTTTACTATCTTTTTTTTTTTTTTGAGGGAGTATTTTTACTATCTCATCTTTATAGATAAGGATCCATATTGTTTATGGACCAAGTGCAAAGTGAAAAATGCATTTATGACTTTATGGTCACATGCTTTTAAATTCTAAAATTAATAGAGGTAGTTGCATGCATAGAATTGTTAGTAGCTTTCGGTGAAAGGGTTACGTACTCATGTGATTCAATTTTTGATTGATGAATTGAATTGATGAGATTAATGAGTATGTTTGTTTGTACCTTGTGGAATGAATTAATAGTGGAGATGCAGATGGCAGACTACCTGTGATAGGGACACGATATTGTGTTGAGGCTTTAGGACTACCTCTAAAGTCTACTTGGAGATCTTGGTACCATAATAATCAGGTCCTCTATTTATCTTTTTTGCCATTGTATAAATTCTTAATTAAAATGAAATCGTAGTATTTTTTATTTATTTTCAATCATTAGAATAAAGAAAAAATATCTTGTAGTATATATTATTGCGCATTTTGATTAGAGAATGAGGAAAATTACAGTGGATAATTGATGAGTTACTTGATTGAGTTTGTGGTGTTTGATAAAATTAATTGTTGAACTAGCGAATAACTATGAATTGACATAAAAAAAATATTTAGTTAATAATTAATTTTTTTAAAGGAAATAATAATTAATTTCAACTAAGAGGTAAAATTAAGGGAAAAATAAGTATACTATAAGATGTTTAGAGTAGCTTGTCAAAAAACACTATACATTTTTTTTTTATATGCAAACGCCATAATCAAGCTAGTAAAAAGGAAACACTATAAACGCATTAGAAAAAGTTGTTACTAAATAAATCTATTTTGATCTTATAAGCTATAAACTATCCGCTGTAAACTCAAAATTTTCTCTCCTCTAAGACTTAATGGATATGAATGGAATGCAGGTTGGAGGAAGGATAGTGGAGTATGAAGGATTGACATATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCTCTCAACAAACCAACTGAGGCTCTCTCTCTTATTCATTCTTTCCTAACTGGAGATCATCTCCCTACTATACGTCCATGA
Protein sequence

>MS.gene26819.t1

MNVFLFVVQFLICFFVLTTTTSLFIKASEINVGSYETDRISDLPGQPSTPPISHFSGYITVNEDHGRALFYWFFEAQSQPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNQNGEGLTFNPYSWNQEANLLFVESPIGVGFSYTNTSSDLTILEDHFVAEDAYNFLVNWLQRFPQFKSRDFFIAGESYAGHYIPQLAELIFDRNKDRSKNTFINLKGFIVGNPETEDYYDNKGLLEYAWSHAVISDQQYDKAKQVCDFKQSQWSNECNQVMSEVFHDYSEIDIYNIYAPACHSNSTSSVTVTNNVPESFSKVKNDYRMKRMRIFGGYDPCYSTYAEEFFNRVDVQSSFHANTIKENNNIAWKVCNDSILRTYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRLPVIGTRYCVEALGLPLKSTWRSWYHNNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTEALSLIHSFLTGDHLPTIRP