Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74338.t1 | XP_013443643.1 | 97.2 | 494 | 13 | 1 | 1 | 494 | 1 | 493 | 4.10E-285 | 989.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74338.t1 | Q0WRX3 | 58.8 | 500 | 191 | 7 | 1 | 488 | 1 | 497 | 1.2e-171 | 604.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74338.t1 | A0A072TLC8 | 97.2 | 494 | 13 | 1 | 1 | 494 | 1 | 493 | 3.0e-285 | 989.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74338.t1 | MTR_0003s0560 | 97.166 | 494 | 13 | 1 | 1 | 494 | 1 | 493 | 0.0 | 994 |
MS.gene74338.t1 | MTR_3g034290 | 70.816 | 490 | 141 | 2 | 1 | 488 | 1 | 490 | 0.0 | 741 |
MS.gene74338.t1 | MTR_0003s0560 | 96.154 | 338 | 12 | 1 | 1 | 338 | 1 | 337 | 0.0 | 671 |
MS.gene74338.t1 | MTR_3g034290 | 69.363 | 408 | 123 | 2 | 1 | 406 | 1 | 408 | 0.0 | 603 |
MS.gene74338.t1 | MTR_3g079600 | 51.303 | 499 | 225 | 10 | 1 | 489 | 1 | 491 | 6.94e-166 | 478 |
MS.gene74338.t1 | MTR_3g079560 | 56.351 | 433 | 180 | 6 | 61 | 489 | 64 | 491 | 7.15e-166 | 478 |
MS.gene74338.t1 | MTR_3g079590 | 55.504 | 427 | 181 | 5 | 62 | 484 | 65 | 486 | 7.07e-164 | 473 |
MS.gene74338.t1 | MTR_1g021010 | 51.400 | 500 | 222 | 13 | 5 | 494 | 2 | 490 | 1.02e-161 | 467 |
MS.gene74338.t1 | MTR_1g020090 | 50.996 | 502 | 219 | 12 | 5 | 494 | 15 | 501 | 8.35e-160 | 463 |
MS.gene74338.t1 | MTR_3g079570 | 54.292 | 431 | 189 | 5 | 62 | 489 | 66 | 491 | 2.72e-159 | 461 |
MS.gene74338.t1 | MTR_3g079620 | 50.628 | 478 | 215 | 8 | 28 | 489 | 27 | 499 | 6.26e-159 | 461 |
MS.gene74338.t1 | MTR_7g013790 | 49.886 | 437 | 202 | 4 | 68 | 488 | 29 | 464 | 2.75e-156 | 452 |
MS.gene74338.t1 | MTR_1g021020 | 48.503 | 501 | 237 | 12 | 2 | 494 | 4 | 491 | 1.58e-155 | 451 |
MS.gene74338.t1 | MTR_4g075150 | 48.961 | 433 | 206 | 5 | 70 | 488 | 30 | 461 | 6.73e-152 | 441 |
MS.gene74338.t1 | MTR_4g075150 | 48.736 | 435 | 206 | 5 | 70 | 488 | 30 | 463 | 7.70e-151 | 439 |
MS.gene74338.t1 | MTR_1g095560 | 49.541 | 436 | 198 | 9 | 70 | 489 | 28 | 457 | 4.48e-148 | 431 |
MS.gene74338.t1 | MTR_3g079630 | 52.715 | 442 | 187 | 9 | 62 | 489 | 65 | 498 | 4.58e-148 | 433 |
MS.gene74338.t1 | MTR_1g095560 | 46.154 | 468 | 198 | 10 | 70 | 489 | 28 | 489 | 4.28e-141 | 415 |
MS.gene74338.t1 | MTR_2g062990 | 48.843 | 432 | 207 | 10 | 70 | 489 | 34 | 463 | 1.43e-139 | 410 |
MS.gene74338.t1 | MTR_1g095540 | 47.332 | 431 | 215 | 7 | 70 | 489 | 28 | 457 | 6.93e-139 | 408 |
MS.gene74338.t1 | MTR_2g062980 | 48.028 | 431 | 212 | 9 | 70 | 489 | 34 | 463 | 3.39e-138 | 407 |
MS.gene74338.t1 | MTR_4g089155 | 47.717 | 438 | 209 | 7 | 73 | 491 | 52 | 488 | 1.04e-134 | 398 |
MS.gene74338.t1 | MTR_2g012860 | 46.789 | 436 | 212 | 5 | 73 | 489 | 40 | 474 | 8.28e-134 | 395 |
MS.gene74338.t1 | MTR_2g063000 | 46.948 | 426 | 213 | 9 | 76 | 489 | 40 | 464 | 4.00e-133 | 394 |
MS.gene74338.t1 | MTR_2g081620 | 47.608 | 439 | 215 | 10 | 70 | 494 | 35 | 472 | 5.29e-133 | 394 |
MS.gene74338.t1 | MTR_4g122950 | 45.843 | 445 | 214 | 7 | 71 | 489 | 35 | 478 | 1.01e-131 | 390 |
MS.gene74338.t1 | MTR_2g012850 | 44.639 | 457 | 231 | 6 | 56 | 491 | 13 | 468 | 3.29e-130 | 386 |
MS.gene74338.t1 | MTR_4g122960 | 44.921 | 443 | 219 | 7 | 71 | 489 | 35 | 476 | 5.41e-127 | 379 |
MS.gene74338.t1 | MTR_7g021130 | 43.151 | 438 | 228 | 8 | 68 | 488 | 24 | 457 | 9.81e-120 | 359 |
MS.gene74338.t1 | MTR_3g090150 | 43.607 | 438 | 231 | 6 | 67 | 488 | 26 | 463 | 5.80e-119 | 358 |
MS.gene74338.t1 | MTR_5g072570 | 44.444 | 441 | 225 | 7 | 67 | 488 | 22 | 461 | 6.73e-119 | 357 |
MS.gene74338.t1 | MTR_3g090130 | 43.936 | 437 | 229 | 7 | 67 | 488 | 21 | 456 | 8.77e-119 | 357 |
MS.gene74338.t1 | MTR_3g498755 | 42.105 | 437 | 228 | 10 | 73 | 488 | 13 | 445 | 1.14e-113 | 343 |
MS.gene74338.t1 | MTR_3g434850 | 41.497 | 441 | 228 | 9 | 69 | 489 | 25 | 455 | 4.00e-110 | 334 |
MS.gene74338.t1 | MTR_2g063000 | 42.019 | 426 | 203 | 10 | 76 | 489 | 40 | 433 | 1.30e-108 | 330 |
MS.gene74338.t1 | MTR_8g099930 | 41.190 | 437 | 230 | 11 | 73 | 488 | 32 | 462 | 4.25e-107 | 327 |
MS.gene74338.t1 | MTR_2g449850 | 40.868 | 438 | 235 | 11 | 69 | 489 | 33 | 463 | 5.01e-104 | 319 |
MS.gene74338.t1 | MTR_1g040370 | 40.281 | 427 | 208 | 7 | 71 | 488 | 27 | 415 | 5.05e-102 | 312 |
MS.gene74338.t1 | MTR_8g011350 | 34.672 | 473 | 249 | 10 | 71 | 487 | 27 | 495 | 2.80e-84 | 269 |
MS.gene74338.t1 | MTR_7g051430 | 33.615 | 473 | 255 | 11 | 71 | 487 | 26 | 495 | 6.13e-78 | 252 |
MS.gene74338.t1 | MTR_1g102130 | 32.965 | 452 | 240 | 12 | 60 | 488 | 79 | 490 | 2.18e-75 | 246 |
MS.gene74338.t1 | MTR_8g011350 | 33.632 | 446 | 236 | 10 | 71 | 460 | 27 | 468 | 3.01e-73 | 239 |
MS.gene74338.t1 | MTR_7g080180 | 33.610 | 482 | 250 | 17 | 67 | 484 | 20 | 495 | 9.43e-72 | 236 |
MS.gene74338.t1 | MTR_7g080180 | 32.506 | 443 | 229 | 17 | 67 | 445 | 20 | 456 | 6.55e-58 | 199 |
MS.gene74338.t1 | MTR_4g021520 | 31.011 | 445 | 263 | 16 | 74 | 487 | 39 | 470 | 1.61e-54 | 190 |
MS.gene74338.t1 | MTR_7g051430 | 32.398 | 392 | 206 | 11 | 71 | 406 | 26 | 414 | 1.88e-53 | 186 |
MS.gene74338.t1 | MTR_4g021535 | 30.769 | 442 | 268 | 14 | 74 | 487 | 35 | 466 | 3.38e-53 | 186 |
MS.gene74338.t1 | MTR_4g021510 | 30.700 | 443 | 267 | 15 | 74 | 487 | 38 | 469 | 9.31e-53 | 185 |
MS.gene74338.t1 | MTR_4g021530 | 29.505 | 444 | 275 | 12 | 72 | 487 | 37 | 470 | 2.19e-51 | 181 |
MS.gene74338.t1 | MTR_4g021490 | 29.345 | 443 | 273 | 15 | 74 | 487 | 39 | 470 | 3.05e-51 | 181 |
MS.gene74338.t1 | MTR_2g018600 | 29.186 | 442 | 268 | 14 | 75 | 482 | 34 | 464 | 4.15e-51 | 181 |
MS.gene74338.t1 | MTR_4g021500 | 30.088 | 452 | 272 | 15 | 74 | 494 | 39 | 477 | 1.98e-50 | 185 |
MS.gene74338.t1 | MTR_4g021500 | 29.540 | 413 | 258 | 14 | 91 | 487 | 492 | 887 | 1.55e-44 | 168 |
MS.gene74338.t1 | MTR_4g021500 | 30.088 | 452 | 272 | 15 | 74 | 494 | 39 | 477 | 2.89e-50 | 184 |
MS.gene74338.t1 | MTR_4g021500 | 29.647 | 425 | 260 | 14 | 91 | 487 | 492 | 905 | 3.67e-46 | 172 |
MS.gene74338.t1 | MTR_2g018590 | 27.865 | 445 | 281 | 12 | 75 | 487 | 33 | 469 | 1.58e-48 | 174 |
MS.gene74338.t1 | MTR_2g018630 | 30.115 | 435 | 276 | 15 | 75 | 487 | 37 | 465 | 5.15e-47 | 169 |
MS.gene74338.t1 | MTR_4g057600 | 30.144 | 418 | 266 | 13 | 80 | 484 | 87 | 491 | 5.35e-47 | 170 |
MS.gene74338.t1 | MTR_2g095730 | 28.008 | 507 | 322 | 19 | 1 | 484 | 8 | 494 | 7.58e-46 | 167 |
MS.gene74338.t1 | MTR_2g095750 | 28.571 | 434 | 253 | 15 | 80 | 484 | 92 | 497 | 1.24e-45 | 167 |
MS.gene74338.t1 | MTR_3g100420 | 28.731 | 449 | 278 | 12 | 75 | 487 | 54 | 496 | 2.66e-45 | 166 |
MS.gene74338.t1 | MTR_1g050545 | 28.404 | 426 | 254 | 14 | 86 | 485 | 81 | 481 | 1.40e-43 | 161 |
MS.gene74338.t1 | MTR_4g057585 | 28.348 | 448 | 256 | 18 | 78 | 485 | 71 | 493 | 7.58e-43 | 159 |
MS.gene74338.t1 | MTR_4g057595 | 27.650 | 434 | 256 | 16 | 80 | 484 | 89 | 493 | 1.47e-42 | 158 |
MS.gene74338.t1 | MTR_4g057570 | 30.266 | 413 | 259 | 12 | 88 | 484 | 90 | 489 | 4.46e-42 | 157 |
MS.gene74338.t1 | MTR_4g021520 | 30.521 | 403 | 236 | 16 | 74 | 445 | 39 | 428 | 6.67e-42 | 155 |
MS.gene74338.t1 | MTR_3g045770 | 26.959 | 434 | 280 | 14 | 75 | 482 | 27 | 449 | 3.57e-41 | 153 |
MS.gene74338.t1 | MTR_5g097180 | 29.782 | 413 | 245 | 15 | 91 | 482 | 44 | 432 | 6.13e-41 | 153 |
MS.gene74338.t1 | MTR_1g094155 | 26.964 | 471 | 274 | 18 | 58 | 485 | 44 | 487 | 4.39e-39 | 149 |
MS.gene74338.t1 | MTR_0075s0010 | 28.455 | 369 | 188 | 11 | 72 | 426 | 5 | 311 | 3.98e-37 | 139 |
MS.gene74338.t1 | MTR_4g084710 | 29.782 | 413 | 245 | 17 | 91 | 482 | 46 | 434 | 3.67e-36 | 139 |
MS.gene74338.t1 | MTR_4g021535 | 26.077 | 441 | 243 | 14 | 74 | 487 | 35 | 419 | 4.44e-35 | 136 |
MS.gene74338.t1 | MTR_2g095710 | 26.130 | 509 | 315 | 21 | 1 | 484 | 8 | 480 | 6.06e-35 | 137 |
MS.gene74338.t1 | MTR_2g009200 | 28.000 | 450 | 253 | 15 | 73 | 487 | 26 | 439 | 6.35e-35 | 135 |
MS.gene74338.t1 | MTR_2g018630 | 28.613 | 346 | 226 | 12 | 158 | 487 | 20 | 360 | 7.11e-32 | 125 |
MS.gene74338.t1 | MTR_7g100560 | 26.271 | 236 | 108 | 4 | 81 | 316 | 65 | 234 | 1.58e-16 | 80.9 |
MS.gene74338.t1 | MTR_4g056520 | 21.154 | 416 | 266 | 13 | 110 | 482 | 57 | 453 | 8.54e-15 | 77.0 |
MS.gene74338.t1 | MTR_1g051175 | 39.450 | 109 | 60 | 3 | 82 | 189 | 20 | 123 | 9.33e-15 | 75.1 |
MS.gene74338.t1 | MTR_2g084530 | 24.286 | 420 | 240 | 15 | 109 | 478 | 56 | 447 | 2.99e-13 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74338.t1 | AT3G63470 | 59.664 | 476 | 180 | 5 | 22 | 488 | 25 | 497 | 0.0 | 602 |
MS.gene74338.t1 | AT3G52020 | 48.431 | 510 | 229 | 11 | 1 | 488 | 1 | 498 | 5.50e-166 | 479 |
MS.gene74338.t1 | AT4G30610 | 54.587 | 436 | 180 | 9 | 70 | 488 | 28 | 462 | 5.10e-164 | 472 |
MS.gene74338.t1 | AT5G08260 | 49.891 | 457 | 206 | 4 | 59 | 492 | 24 | 480 | 3.50e-156 | 453 |
MS.gene74338.t1 | AT3G02110 | 49.433 | 441 | 197 | 6 | 71 | 488 | 34 | 471 | 2.48e-154 | 448 |
MS.gene74338.t1 | AT2G24010 | 50.351 | 427 | 203 | 4 | 70 | 488 | 26 | 451 | 5.40e-153 | 444 |
MS.gene74338.t1 | AT2G24000 | 49.541 | 436 | 201 | 5 | 70 | 487 | 26 | 460 | 1.30e-152 | 443 |
MS.gene74338.t1 | AT2G35780 | 49.537 | 432 | 200 | 8 | 70 | 488 | 25 | 451 | 1.22e-150 | 438 |
MS.gene74338.t1 | AT5G23210 | 49.224 | 451 | 197 | 6 | 70 | 489 | 47 | 496 | 2.19e-150 | 439 |
MS.gene74338.t1 | AT2G24010 | 48.416 | 442 | 204 | 5 | 70 | 488 | 26 | 466 | 1.90e-147 | 430 |
MS.gene74338.t1 | AT3G52000 | 50.824 | 425 | 199 | 7 | 70 | 488 | 59 | 479 | 2.74e-147 | 430 |
MS.gene74338.t1 | AT3G07990 | 49.533 | 428 | 204 | 7 | 72 | 488 | 31 | 457 | 1.17e-146 | 428 |
MS.gene74338.t1 | AT2G05850 | 44.378 | 498 | 253 | 10 | 1 | 488 | 1 | 484 | 3.24e-146 | 428 |
MS.gene74338.t1 | AT3G52010 | 45.070 | 497 | 251 | 9 | 1 | 488 | 1 | 484 | 2.07e-143 | 421 |
MS.gene74338.t1 | AT2G35770 | 51.049 | 429 | 199 | 9 | 70 | 489 | 33 | 459 | 5.19e-141 | 414 |
MS.gene74338.t1 | AT4G30810 | 48.140 | 430 | 210 | 7 | 70 | 487 | 33 | 461 | 1.88e-140 | 413 |
MS.gene74338.t1 | AT2G24010 | 45.887 | 462 | 201 | 6 | 75 | 488 | 2 | 462 | 5.67e-140 | 411 |
MS.gene74338.t1 | AT1G61130 | 47.191 | 445 | 216 | 8 | 61 | 488 | 18 | 460 | 9.63e-137 | 403 |
MS.gene74338.t1 | AT1G11080 | 46.309 | 447 | 213 | 5 | 71 | 491 | 47 | 492 | 6.89e-135 | 399 |
MS.gene74338.t1 | AT1G11080 | 46.309 | 447 | 213 | 5 | 71 | 491 | 47 | 492 | 8.83e-135 | 399 |
MS.gene74338.t1 | AT4G15100 | 45.657 | 449 | 219 | 5 | 70 | 494 | 40 | 487 | 1.87e-134 | 398 |
MS.gene74338.t1 | AT5G23210 | 48.872 | 399 | 173 | 5 | 70 | 437 | 47 | 445 | 1.68e-132 | 392 |
MS.gene74338.t1 | AT5G23210 | 48.744 | 398 | 172 | 6 | 123 | 489 | 5 | 401 | 6.66e-127 | 375 |
MS.gene74338.t1 | AT5G23210 | 48.731 | 394 | 170 | 6 | 127 | 489 | 8 | 400 | 1.17e-125 | 372 |
MS.gene74338.t1 | AT1G43780 | 44.118 | 442 | 226 | 7 | 67 | 488 | 30 | 470 | 2.15e-123 | 369 |
MS.gene74338.t1 | AT2G12480 | 45.023 | 442 | 228 | 7 | 67 | 494 | 24 | 464 | 1.07e-122 | 367 |
MS.gene74338.t1 | AT3G17180 | 42.763 | 456 | 232 | 8 | 58 | 489 | 26 | 476 | 4.87e-121 | 363 |
MS.gene74338.t1 | AT2G12480 | 44.851 | 437 | 212 | 9 | 67 | 494 | 24 | 440 | 6.62e-119 | 356 |
MS.gene74338.t1 | AT2G33530 | 43.508 | 439 | 225 | 8 | 69 | 488 | 28 | 462 | 3.33e-118 | 355 |
MS.gene74338.t1 | AT2G12480 | 44.495 | 436 | 213 | 9 | 67 | 494 | 24 | 438 | 2.49e-117 | 352 |
MS.gene74338.t1 | AT5G42240 | 43.537 | 441 | 229 | 7 | 67 | 488 | 25 | 464 | 2.57e-117 | 353 |
MS.gene74338.t1 | AT1G28110 | 43.649 | 433 | 223 | 8 | 73 | 488 | 30 | 458 | 5.45e-116 | 350 |
MS.gene74338.t1 | AT1G28110 | 43.649 | 433 | 223 | 8 | 73 | 488 | 30 | 458 | 5.45e-116 | 350 |
MS.gene74338.t1 | AT2G12480 | 44.671 | 441 | 206 | 11 | 67 | 494 | 24 | 439 | 1.06e-115 | 348 |
MS.gene74338.t1 | AT5G42230 | 42.404 | 441 | 234 | 7 | 67 | 488 | 21 | 460 | 1.88e-111 | 338 |
MS.gene74338.t1 | AT5G42230 | 42.404 | 441 | 234 | 7 | 67 | 488 | 21 | 460 | 1.88e-111 | 338 |
MS.gene74338.t1 | AT5G23210 | 48.246 | 342 | 146 | 5 | 127 | 437 | 8 | 349 | 1.91e-107 | 324 |
MS.gene74338.t1 | AT2G24010 | 45.915 | 355 | 169 | 4 | 75 | 406 | 2 | 356 | 8.24e-107 | 322 |
MS.gene74338.t1 | AT3G17180 | 41.106 | 416 | 216 | 8 | 58 | 449 | 26 | 436 | 6.37e-104 | 318 |
MS.gene74338.t1 | AT3G25420 | 35.837 | 466 | 239 | 11 | 75 | 484 | 30 | 491 | 1.40e-83 | 267 |
MS.gene74338.t1 | AT4G12910 | 34.737 | 475 | 252 | 11 | 67 | 487 | 27 | 497 | 1.23e-80 | 259 |
MS.gene74338.t1 | AT3G56540 | 55.844 | 231 | 90 | 4 | 4 | 228 | 8 | 232 | 3.75e-78 | 245 |
MS.gene74338.t1 | AT2G24000 | 42.268 | 291 | 149 | 5 | 215 | 487 | 108 | 397 | 1.40e-72 | 236 |
MS.gene74338.t1 | AT2G24000 | 58.696 | 92 | 37 | 1 | 70 | 160 | 26 | 117 | 7.25e-30 | 121 |
MS.gene74338.t1 | AT4G12910 | 33.487 | 433 | 230 | 11 | 67 | 445 | 27 | 455 | 5.21e-65 | 217 |
MS.gene74338.t1 | AT2G22990 | 32.388 | 423 | 264 | 11 | 75 | 487 | 23 | 433 | 3.24e-63 | 212 |
MS.gene74338.t1 | AT1G73270 | 31.442 | 423 | 266 | 10 | 75 | 487 | 33 | 441 | 7.35e-60 | 203 |
MS.gene74338.t1 | AT1G73270 | 31.442 | 423 | 266 | 10 | 75 | 487 | 33 | 441 | 8.59e-60 | 203 |
MS.gene74338.t1 | AT2G23010 | 31.567 | 434 | 275 | 11 | 65 | 487 | 15 | 437 | 1.38e-59 | 202 |
MS.gene74338.t1 | AT2G23010 | 31.567 | 434 | 275 | 11 | 65 | 487 | 15 | 437 | 2.78e-59 | 202 |
MS.gene74338.t1 | AT2G22990 | 32.289 | 415 | 260 | 10 | 75 | 479 | 23 | 426 | 5.52e-58 | 199 |
MS.gene74338.t1 | AT2G22920 | 31.754 | 422 | 262 | 12 | 75 | 484 | 25 | 432 | 5.86e-58 | 198 |
MS.gene74338.t1 | AT2G22990 | 32.828 | 396 | 245 | 10 | 75 | 460 | 23 | 407 | 6.89e-58 | 197 |
MS.gene74338.t1 | AT2G22970 | 32.000 | 425 | 261 | 13 | 75 | 487 | 25 | 433 | 7.11e-58 | 198 |
MS.gene74338.t1 | AT1G73290 | 30.233 | 430 | 278 | 10 | 66 | 487 | 23 | 438 | 8.70e-58 | 198 |
MS.gene74338.t1 | AT2G23000 | 32.000 | 425 | 265 | 12 | 75 | 487 | 25 | 437 | 3.31e-57 | 196 |
MS.gene74338.t1 | AT2G23000 | 32.000 | 425 | 265 | 12 | 75 | 487 | 25 | 437 | 3.31e-57 | 196 |
MS.gene74338.t1 | AT2G22990 | 31.442 | 423 | 259 | 12 | 75 | 487 | 23 | 424 | 5.44e-57 | 195 |
MS.gene74338.t1 | AT2G22980 | 31.059 | 425 | 261 | 13 | 75 | 487 | 26 | 430 | 1.22e-55 | 192 |
MS.gene74338.t1 | AT3G10450 | 31.235 | 429 | 259 | 13 | 75 | 487 | 29 | 437 | 1.71e-55 | 192 |
MS.gene74338.t1 | AT3G12230 | 33.099 | 426 | 255 | 15 | 75 | 487 | 27 | 435 | 8.81e-55 | 190 |
MS.gene74338.t1 | AT2G22970 | 32.754 | 403 | 244 | 12 | 75 | 465 | 25 | 412 | 2.12e-54 | 189 |
MS.gene74338.t1 | AT1G33540 | 29.333 | 450 | 287 | 11 | 65 | 487 | 19 | 464 | 2.22e-54 | 189 |
MS.gene74338.t1 | AT3G10450 | 31.328 | 399 | 241 | 11 | 103 | 487 | 15 | 394 | 8.50e-54 | 186 |
MS.gene74338.t1 | AT1G73280 | 30.607 | 428 | 263 | 13 | 75 | 487 | 33 | 441 | 9.84e-54 | 187 |
MS.gene74338.t1 | AT1G73300 | 29.787 | 423 | 273 | 10 | 75 | 487 | 33 | 441 | 1.26e-53 | 187 |
MS.gene74338.t1 | AT1G73300 | 29.787 | 423 | 273 | 10 | 75 | 487 | 33 | 441 | 1.26e-53 | 187 |
MS.gene74338.t1 | AT3G12203 | 31.529 | 425 | 262 | 13 | 75 | 487 | 9 | 416 | 1.96e-53 | 186 |
MS.gene74338.t1 | AT2G22970 | 32.500 | 400 | 243 | 12 | 75 | 462 | 25 | 409 | 1.99e-53 | 186 |
MS.gene74338.t1 | AT3G12203 | 31.529 | 425 | 262 | 13 | 75 | 487 | 30 | 437 | 4.10e-53 | 185 |
MS.gene74338.t1 | AT3G12220 | 32.706 | 425 | 258 | 14 | 75 | 487 | 27 | 435 | 2.15e-52 | 183 |
MS.gene74338.t1 | AT1G33540 | 29.684 | 411 | 259 | 10 | 103 | 487 | 15 | 421 | 5.18e-52 | 182 |
MS.gene74338.t1 | AT3G12240 | 32.629 | 426 | 257 | 15 | 75 | 487 | 28 | 436 | 6.52e-52 | 182 |
MS.gene74338.t1 | AT5G36180 | 29.551 | 423 | 274 | 10 | 75 | 487 | 33 | 441 | 6.91e-52 | 182 |
MS.gene74338.t1 | AT5G09640 | 29.955 | 444 | 275 | 13 | 75 | 487 | 27 | 465 | 9.08e-52 | 182 |
MS.gene74338.t1 | AT2G22980 | 31.266 | 403 | 246 | 12 | 75 | 465 | 26 | 409 | 1.97e-51 | 181 |
MS.gene74338.t1 | AT2G22980 | 31.250 | 400 | 244 | 12 | 75 | 462 | 26 | 406 | 2.12e-51 | 180 |
MS.gene74338.t1 | AT3G12203 | 31.818 | 396 | 242 | 12 | 103 | 487 | 1 | 379 | 3.21e-51 | 179 |
MS.gene74338.t1 | AT3G12220 | 33.081 | 396 | 238 | 13 | 103 | 487 | 26 | 405 | 8.34e-51 | 178 |
MS.gene74338.t1 | AT3G10450 | 31.188 | 404 | 243 | 12 | 75 | 462 | 29 | 413 | 1.98e-49 | 175 |
MS.gene74338.t1 | AT1G73310 | 28.605 | 423 | 278 | 10 | 75 | 487 | 33 | 441 | 2.57e-49 | 175 |
MS.gene74338.t1 | AT2G22920 | 31.771 | 384 | 237 | 11 | 75 | 446 | 25 | 395 | 1.92e-48 | 172 |
MS.gene74338.t1 | AT3G10450 | 31.283 | 374 | 225 | 10 | 103 | 462 | 15 | 370 | 7.59e-48 | 169 |
MS.gene74338.t1 | AT1G73290 | 29.563 | 389 | 253 | 9 | 66 | 446 | 23 | 398 | 2.27e-47 | 169 |
MS.gene74338.t1 | AT5G22980 | 29.108 | 426 | 275 | 14 | 80 | 492 | 90 | 501 | 2.34e-47 | 171 |
MS.gene74338.t1 | AT3G10410 | 28.205 | 429 | 262 | 14 | 80 | 485 | 90 | 495 | 8.28e-46 | 167 |
MS.gene74338.t1 | AT3G45010 | 30.024 | 423 | 262 | 14 | 80 | 484 | 92 | 498 | 9.20e-45 | 164 |
MS.gene74338.t1 | AT2G22990 | 31.003 | 329 | 212 | 7 | 163 | 487 | 2 | 319 | 1.78e-44 | 159 |
MS.gene74338.t1 | AT2G22990 | 31.003 | 329 | 212 | 7 | 163 | 487 | 2 | 319 | 3.72e-44 | 158 |
MS.gene74338.t1 | AT1G73310 | 28.238 | 386 | 254 | 9 | 75 | 450 | 33 | 405 | 3.26e-41 | 153 |
MS.gene74338.t1 | AT2G22920 | 32.558 | 301 | 180 | 9 | 75 | 364 | 25 | 313 | 1.32e-38 | 143 |
MS.gene74338.t1 | AT1G73280 | 29.480 | 346 | 217 | 10 | 151 | 487 | 12 | 339 | 1.89e-38 | 143 |
MS.gene74338.t1 | AT1G15000 | 29.684 | 411 | 253 | 13 | 91 | 487 | 38 | 426 | 4.10e-38 | 145 |
MS.gene74338.t1 | AT5G36180 | 29.032 | 341 | 225 | 7 | 151 | 487 | 12 | 339 | 2.65e-37 | 140 |
MS.gene74338.t1 | AT5G36180 | 29.032 | 341 | 225 | 7 | 151 | 487 | 12 | 339 | 2.65e-37 | 140 |
MS.gene74338.t1 | AT2G22970 | 33.113 | 302 | 176 | 11 | 75 | 364 | 25 | 312 | 3.44e-36 | 137 |
MS.gene74338.t1 | AT1G73280 | 29.217 | 332 | 208 | 10 | 165 | 487 | 1 | 314 | 1.90e-35 | 134 |
MS.gene74338.t1 | AT1G73290 | 30.877 | 285 | 181 | 8 | 66 | 342 | 23 | 299 | 5.37e-35 | 133 |
MS.gene74338.t1 | AT2G22980 | 30.671 | 313 | 190 | 10 | 75 | 376 | 26 | 322 | 1.35e-34 | 133 |
MS.gene74338.t1 | AT2G22980 | 29.085 | 306 | 193 | 8 | 163 | 462 | 2 | 289 | 1.66e-33 | 129 |
MS.gene74338.t1 | AT5G36180 | 28.797 | 316 | 209 | 6 | 151 | 462 | 12 | 315 | 2.52e-32 | 126 |
MS.gene74338.t1 | AT1G73280 | 30.000 | 330 | 199 | 11 | 75 | 389 | 33 | 345 | 2.74e-32 | 127 |
MS.gene74338.t1 | AT3G12220 | 36.916 | 214 | 124 | 7 | 75 | 280 | 27 | 237 | 9.16e-29 | 117 |
MS.gene74338.t1 | AT3G12220 | 30.968 | 155 | 100 | 4 | 337 | 487 | 232 | 383 | 2.50e-13 | 72.0 |
MS.gene74338.t1 | AT1G73310 | 27.184 | 309 | 209 | 6 | 146 | 450 | 7 | 303 | 1.86e-27 | 112 |
MS.gene74338.t1 | AT5G36180 | 28.094 | 299 | 199 | 6 | 151 | 445 | 12 | 298 | 2.07e-26 | 110 |
MS.gene74338.t1 | AT2G22920 | 29.323 | 266 | 170 | 8 | 228 | 487 | 3 | 256 | 4.84e-24 | 101 |
MS.gene74338.t1 | AT5G22960 | 35.795 | 176 | 81 | 8 | 80 | 249 | 25 | 174 | 1.65e-22 | 95.5 |
MS.gene74338.t1 | AT2G27920 | 23.666 | 431 | 279 | 15 | 87 | 478 | 33 | 452 | 4.42e-17 | 84.0 |
MS.gene74338.t1 | AT2G22960 | 30.657 | 137 | 92 | 3 | 351 | 487 | 51 | 184 | 3.65e-16 | 77.0 |
Find 97 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATAGAGATTTCTATATTTC+TGG | 0.085934 | 4.3:-60068210 | MS.gene74338:CDS |
ATTGAGGAATTCATGTAAAA+TGG | 0.163663 | 4.3:+60064228 | None:intergenic |
GTATGTCAAATTGGATAAAT+TGG | 0.187924 | 4.3:-60069862 | MS.gene74338:CDS |
CCCCTTCTTCTTTGGCTCAA+TGG | 0.250355 | 4.3:-60069783 | MS.gene74338:CDS |
AAACACTTCCCCTTCTTCTT+TGG | 0.257787 | 4.3:-60069791 | MS.gene74338:CDS |
TTGGTGAAATTCTCTCAATT+TGG | 0.265987 | 4.3:-60069888 | MS.gene74338:CDS |
TGGTACCCTTGGTTGGCTTA+TGG | 0.279954 | 4.3:-60063717 | MS.gene74338:CDS |
TCAATAGTGGCCTTAGGGTT+TGG | 0.290975 | 4.3:-60064210 | MS.gene74338:CDS |
TTCAACAAAGTAATAGTAAA+AGG | 0.303949 | 4.3:+60069830 | None:intergenic |
TTGATTAAACATTTCTTAGA+TGG | 0.304713 | 4.3:-60063270 | MS.gene74338:CDS |
CATTCTTTATCATAACAAAA+AGG | 0.316257 | 4.3:-60068145 | MS.gene74338:CDS |
ATTTGGAGGGTATGTCAAAT+TGG | 0.322622 | 4.3:-60069871 | MS.gene74338:CDS |
ACTCCATTCATATTTGAGTT+TGG | 0.330123 | 4.3:+60064303 | None:intergenic |
TGTCAAGAGCTTTAACTTGT+TGG | 0.354084 | 4.3:+60070057 | None:intergenic |
CTATGGAGCAATGCAAGAAT+TGG | 0.358566 | 4.3:-60068911 | MS.gene74338:CDS |
AATTCCTCAATAGTGGCCTT+AGG | 0.369956 | 4.3:-60064216 | MS.gene74338:CDS |
GCTCTTCCTGGTTGGTAACT+TGG | 0.372509 | 4.3:+60063300 | None:intergenic |
TTACATGAATTCCTCAATAG+TGG | 0.374769 | 4.3:-60064223 | MS.gene74338:CDS |
TCATCAGATTATAGTACTAA+TGG | 0.376627 | 4.3:-60068303 | MS.gene74338:CDS |
CTTTAACTTGTTGGTTTCCA+TGG | 0.377860 | 4.3:+60070066 | None:intergenic |
GATAGAATTAAGAATCTTCC+AGG | 0.382750 | 4.3:-60069918 | MS.gene74338:CDS |
AATAGATACTCATGGAACTA+TGG | 0.386735 | 4.3:-60068847 | MS.gene74338:intron |
ATCAAAGCAAGAGCTCTTCC+TGG | 0.389221 | 4.3:+60063288 | None:intergenic |
AGTTCCATGAGTATCTATTA+TGG | 0.390689 | 4.3:+60068851 | None:intergenic |
CAGTGAAGTCATTAGACATT+GGG | 0.398024 | 4.3:-60064275 | MS.gene74338:CDS |
CAATTCTTGCATTGCTCCAT+AGG | 0.399239 | 4.3:+60068912 | None:intergenic |
GAATTCTTAGTTGATGTAAC+AGG | 0.400113 | 4.3:+60063774 | None:intergenic |
CATCAACCTCAAAGGAATCT+TGG | 0.410283 | 4.3:-60068112 | MS.gene74338:intron |
TATGTCAAATTGGATAAATT+GGG | 0.413758 | 4.3:-60069861 | MS.gene74338:CDS |
GCAAGATAATCATACATTGC+TGG | 0.414935 | 4.3:+60064981 | None:intergenic |
TTTAATTTGGGAGCAGGAAG+TGG | 0.419151 | 4.3:+60063243 | None:intergenic |
GAGGAAATTCACAAATTGAT+AGG | 0.423178 | 4.3:-60070013 | MS.gene74338:CDS |
TTGAGGAATTCATGTAAAAT+GGG | 0.435402 | 4.3:+60064229 | None:intergenic |
TAAGAAAATCCTACTCCAAC+AGG | 0.441399 | 4.3:+60068336 | None:intergenic |
ATTCCTCAATAGTGGCCTTA+GGG | 0.452463 | 4.3:-60064215 | MS.gene74338:CDS |
CCGTCACTGTTTACTCTGAA+AGG | 0.453141 | 4.3:+60068886 | None:intergenic |
GTGAAATTCTCTCAATTTGG+AGG | 0.453674 | 4.3:-60069885 | MS.gene74338:CDS |
AATTTCACCAAGGGTTGCCC+TGG | 0.457946 | 4.3:+60069900 | None:intergenic |
ATTTCTGGAGAAAGTTATGC+TGG | 0.482114 | 4.3:-60068195 | MS.gene74338:CDS |
CTCCATTGAGCCAAAGAAGA+AGG | 0.482580 | 4.3:+60069781 | None:intergenic |
TTGGAGTCACCTGTTGGAGT+AGG | 0.486306 | 4.3:-60068345 | MS.gene74338:CDS |
TCACCAAACTCAAATATGAA+TGG | 0.486938 | 4.3:-60064306 | MS.gene74338:CDS |
TTTGCTACAGTGAGAGAAGC+AGG | 0.490778 | 4.3:-60063333 | MS.gene74338:CDS |
CACATACCAAGATTCCTTTG+AGG | 0.492999 | 4.3:+60068106 | None:intergenic |
AATTGATAGGAGTGAATTTG+AGG | 0.493301 | 4.3:-60070000 | MS.gene74338:CDS |
GGATGTTCATCTCTAGCCTA+TGG | 0.502614 | 4.3:-60068928 | MS.gene74338:CDS |
ATAGGCTAGAGATGAACATC+CGG | 0.503195 | 4.3:+60068930 | None:intergenic |
CTGGAAAGTCTGTCTGATCA+TGG | 0.506101 | 4.3:+60065000 | None:intergenic |
AAAATATGAAAGAATTAGAA+AGG | 0.508378 | 4.3:+60070100 | None:intergenic |
TATGGAGCAATGCAAGAATT+GGG | 0.509752 | 4.3:-60068910 | MS.gene74338:CDS |
TCCATTGAGCCAAAGAAGAA+GGG | 0.511798 | 4.3:+60069782 | None:intergenic |
CTTTGTTTGAAACAGGTTGG+TGG | 0.518959 | 4.3:-60063387 | MS.gene74338:intron |
AAACCCTAAGGCCACTATTG+AGG | 0.531060 | 4.3:+60064212 | None:intergenic |
CTTCTTCTTTGGCTCAATGG+AGG | 0.537092 | 4.3:-60069780 | MS.gene74338:intron |
GTTTGGTGACATTAGCATGA+AGG | 0.538016 | 4.3:+60064320 | None:intergenic |
GAATCTTCCAGGGCAACCCT+TGG | 0.540123 | 4.3:-60069907 | MS.gene74338:CDS |
AACTAGGTGGTACCCTTGGT+TGG | 0.540983 | 4.3:-60063724 | MS.gene74338:CDS |
GCAGTGAAGTCATTAGACAT+TGG | 0.545453 | 4.3:-60064276 | MS.gene74338:CDS |
TTAAAACTAGGTGGTACCCT+TGG | 0.547595 | 4.3:-60063728 | MS.gene74338:CDS |
TTTGGTGACATTAGCATGAA+GGG | 0.548269 | 4.3:+60064321 | None:intergenic |
TTGTTCTTGGAGTCACCTGT+TGG | 0.554482 | 4.3:-60068351 | MS.gene74338:CDS |
TGAACCTTCCCATTAAAACT+AGG | 0.563296 | 4.3:-60063740 | MS.gene74338:CDS |
TGAAATTCTCTCAATTTGGA+GGG | 0.573327 | 4.3:-60069884 | MS.gene74338:CDS |
AATTGAGAGAATTTCACCAA+GGG | 0.579487 | 4.3:+60069891 | None:intergenic |
TGGATATACACAAGTATACA+AGG | 0.581314 | 4.3:-60063367 | MS.gene74338:CDS |
ACCTGAAAATCCAAACCCTA+AGG | 0.581358 | 4.3:+60064200 | None:intergenic |
GGAATTCATGTAAAATGGGA+AGG | 0.582570 | 4.3:+60064233 | None:intergenic |
GTCAAATTGGATAAATTGGG+TGG | 0.586976 | 4.3:-60069858 | MS.gene74338:CDS |
TGCCATTGTTCATTCTCAAG+AGG | 0.587651 | 4.3:-60069955 | MS.gene74338:CDS |
TAGGCTAGAGATGAACATCC+GGG | 0.588073 | 4.3:+60068931 | None:intergenic |
TACACCATAATAGATACTCA+TGG | 0.590056 | 4.3:-60068855 | MS.gene74338:CDS |
GCCATTGTTCATTCTCAAGA+GGG | 0.592023 | 4.3:-60069954 | MS.gene74338:CDS |
TAATAGAAAAGATGTTCAAG+AGG | 0.592744 | 4.3:-60064344 | MS.gene74338:CDS |
CCCTTGGTTGGCTTATGGAG+AGG | 0.593818 | 4.3:-60063712 | MS.gene74338:intron |
GCAGTGGTGACACAGATGGA+AGG | 0.596615 | 4.3:-60063800 | MS.gene74338:intron |
TTATGCAGTGGTGACACAGA+TGG | 0.597589 | 4.3:-60063804 | MS.gene74338:intron |
AAGACAATCATCAACCTCAA+AGG | 0.599554 | 4.3:-60068120 | MS.gene74338:CDS |
AAGCAAGAGCTCTTCCTGGT+TGG | 0.601702 | 4.3:+60063292 | None:intergenic |
AGCTCTTGACAATCTTCACA+AGG | 0.607520 | 4.3:-60070045 | MS.gene74338:CDS |
AGAATGGTATGTGCAAGTTG+AGG | 0.612606 | 4.3:+60068162 | None:intergenic |
CCATTGAGCCAAAGAAGAAG+GGG | 0.621843 | 4.3:+60069783 | None:intergenic |
CAGTGGTGACACAGATGGAA+GGG | 0.623848 | 4.3:-60063799 | MS.gene74338:CDS |
GACACATAAGACTCACCACA+TGG | 0.626935 | 4.3:+60064376 | None:intergenic |
CAAGTGCCAAGTTACCAACC+AGG | 0.627517 | 4.3:-60063306 | MS.gene74338:CDS |
ACCTCTCCATAAGCCAACCA+AGG | 0.632930 | 4.3:+60063711 | None:intergenic |
ATAGAATTAAGAATCTTCCA+GGG | 0.656358 | 4.3:-60069917 | MS.gene74338:CDS |
CCTTTCAGAGTAAACAGTGA+CGG | 0.666534 | 4.3:-60068886 | MS.gene74338:CDS |
TGTCTAATGACTTCACTGCA+AGG | 0.667184 | 4.3:+60064280 | None:intergenic |
GGTACAAGAAATTGTGCATG+AGG | 0.672079 | 4.3:-60069979 | MS.gene74338:CDS |
CCTCTCCATAAGCCAACCAA+GGG | 0.680452 | 4.3:+60063712 | None:intergenic |
AAAATGACAATCTCACAACC+AGG | 0.680833 | 4.3:-60064800 | MS.gene74338:CDS |
TTGCTACAGTGAGAGAAGCA+GGG | 0.682513 | 4.3:-60063332 | MS.gene74338:CDS |
ACCCTCTTGAGAATGAACAA+TGG | 0.701703 | 4.3:+60069953 | None:intergenic |
ACCTTCCCATTAAAACTAGG+TGG | 0.704705 | 4.3:-60063737 | MS.gene74338:CDS |
AAATTGAGAGAATTTCACCA+AGG | 0.707997 | 4.3:+60069890 | None:intergenic |
GGATATACACAAGTATACAA+GGG | 0.717037 | 4.3:-60063366 | MS.gene74338:CDS |
CAGATTGTGAATGATCCATG+TGG | 0.776904 | 4.3:-60064391 | MS.gene74338:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 60063236 | 60070156 | 60063236 | ID=MS.gene74338 |
chr4.3 | mRNA | 60063236 | 60070156 | 60063236 | ID=MS.gene74338.t1;Parent=MS.gene74338 |
chr4.3 | exon | 60069781 | 60070156 | 60069781 | ID=MS.gene74338.t1.exon1;Parent=MS.gene74338.t1 |
chr4.3 | CDS | 60069781 | 60070156 | 60069781 | ID=cds.MS.gene74338.t1;Parent=MS.gene74338.t1 |
chr4.3 | exon | 60068848 | 60068955 | 60068848 | ID=MS.gene74338.t1.exon2;Parent=MS.gene74338.t1 |
chr4.3 | CDS | 60068848 | 60068955 | 60068848 | ID=cds.MS.gene74338.t1;Parent=MS.gene74338.t1 |
chr4.3 | exon | 60068113 | 60068384 | 60068113 | ID=MS.gene74338.t1.exon3;Parent=MS.gene74338.t1 |
chr4.3 | CDS | 60068113 | 60068384 | 60068113 | ID=cds.MS.gene74338.t1;Parent=MS.gene74338.t1 |
chr4.3 | exon | 60064785 | 60065039 | 60064785 | ID=MS.gene74338.t1.exon4;Parent=MS.gene74338.t1 |
chr4.3 | CDS | 60064785 | 60065039 | 60064785 | ID=cds.MS.gene74338.t1;Parent=MS.gene74338.t1 |
chr4.3 | exon | 60064202 | 60064410 | 60064202 | ID=MS.gene74338.t1.exon5;Parent=MS.gene74338.t1 |
chr4.3 | CDS | 60064202 | 60064410 | 60064202 | ID=cds.MS.gene74338.t1;Parent=MS.gene74338.t1 |
chr4.3 | exon | 60063713 | 60063818 | 60063713 | ID=MS.gene74338.t1.exon6;Parent=MS.gene74338.t1 |
chr4.3 | CDS | 60063713 | 60063818 | 60063713 | ID=cds.MS.gene74338.t1;Parent=MS.gene74338.t1 |
chr4.3 | exon | 60063236 | 60063394 | 60063236 | ID=MS.gene74338.t1.exon7;Parent=MS.gene74338.t1 |
chr4.3 | CDS | 60063236 | 60063394 | 60063236 | ID=cds.MS.gene74338.t1;Parent=MS.gene74338.t1 |
Gene Sequence |
Protein sequence |