Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61117.t1 | XP_024638628.1 | 100 | 214 | 0 | 0 | 1 | 214 | 1 | 214 | 3.30E-114 | 421 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61117.t1 | P28186 | 94.0 | 215 | 12 | 1 | 1 | 214 | 1 | 215 | 5.5e-110 | 398.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61117.t1 | I3SM57 | 100.0 | 214 | 0 | 0 | 1 | 214 | 1 | 214 | 2.4e-114 | 421.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene61117 | 0.814854 | 1.25E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene61117 | 0.828179 | 1.04E-54 | -1.69E-46 |
| MS.gene049887 | MS.gene61117 | 0.811435 | 7.01E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene61117 | 0.801124 | 1.04E-48 | -1.69E-46 |
| MS.gene050689 | MS.gene61117 | 0.815505 | 8.93E-52 | -1.69E-46 |
| MS.gene050752 | MS.gene61117 | 0.844215 | 8.68E-59 | -1.69E-46 |
| MS.gene050838 | MS.gene61117 | 0.894154 | 3.22E-75 | -1.69E-46 |
| MS.gene050945 | MS.gene61117 | 0.812546 | 4.01E-51 | -1.69E-46 |
| MS.gene050955 | MS.gene61117 | 0.806037 | 9.99E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene61117 | 0.862229 | 5.87E-64 | -1.69E-46 |
| MS.gene051043 | MS.gene61117 | 0.813239 | 2.83E-51 | -1.69E-46 |
| MS.gene051233 | MS.gene61117 | 0.830332 | 3.12E-55 | -1.69E-46 |
| MS.gene051234 | MS.gene61117 | 0.899385 | 2.09E-77 | -1.69E-46 |
| MS.gene051343 | MS.gene61117 | 0.823511 | 1.33E-53 | -1.69E-46 |
| MS.gene051642 | MS.gene61117 | 0.822738 | 2.02E-53 | -1.69E-46 |
| MS.gene051850 | MS.gene61117 | 0.808563 | 2.91E-50 | -1.69E-46 |
| MS.gene051885 | MS.gene61117 | 0.836829 | 7.44E-57 | -1.69E-46 |
| MS.gene052072 | MS.gene61117 | 0.848825 | 4.79E-60 | -1.69E-46 |
| MS.gene052296 | MS.gene61117 | 0.836862 | 7.30E-57 | -1.69E-46 |
| MS.gene052307 | MS.gene61117 | 0.80286 | 4.59E-49 | -1.69E-46 |
| MS.gene052335 | MS.gene61117 | 0.820593 | 6.32E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene61117 | 0.806721 | 7.17E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene61117 | 0.837699 | 4.46E-57 | -1.69E-46 |
| MS.gene054004 | MS.gene61117 | 0.819007 | 1.46E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene61117 | 0.811249 | 7.69E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene61117 | 0.841797 | 3.82E-58 | -1.69E-46 |
| MS.gene055424 | MS.gene61117 | 0.800734 | 1.25E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene61117 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene61117 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene056578 | MS.gene61117 | 0.804272 | 2.34E-49 | -1.69E-46 |
| MS.gene056881 | MS.gene61117 | 0.823675 | 1.22E-53 | -1.69E-46 |
| MS.gene057094 | MS.gene61117 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene61117 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene058074 | MS.gene61117 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene61117 | 0.829642 | 4.59E-55 | -1.69E-46 |
| MS.gene058720 | MS.gene61117 | 0.815189 | 1.05E-51 | -1.69E-46 |
| MS.gene05880 | MS.gene61117 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene61117 | 0.812957 | 3.26E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene61117 | 0.824312 | 8.64E-54 | -1.69E-46 |
| MS.gene059227 | MS.gene61117 | 0.81437 | 1.59E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene61117 | 0.83847 | 2.82E-57 | -1.69E-46 |
| MS.gene060563 | MS.gene61117 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene060574 | MS.gene61117 | 0.804661 | 1.94E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene61117 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene61117 | 0.861229 | 1.19E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61117.t1 | MTR_4g063160 | 96.296 | 216 | 6 | 1 | 1 | 214 | 1 | 216 | 2.99e-153 | 424 |
| MS.gene61117.t1 | MTR_1g068740 | 91.628 | 215 | 17 | 1 | 1 | 214 | 1 | 215 | 3.36e-148 | 410 |
| MS.gene61117.t1 | MTR_1g068730 | 91.163 | 215 | 18 | 1 | 1 | 214 | 1 | 215 | 1.90e-147 | 409 |
| MS.gene61117.t1 | MTR_1g115325 | 94.146 | 205 | 11 | 1 | 11 | 214 | 11 | 215 | 2.23e-141 | 394 |
| MS.gene61117.t1 | MTR_7g100020 | 95.122 | 205 | 9 | 1 | 11 | 214 | 11 | 215 | 3.39e-138 | 385 |
| MS.gene61117.t1 | MTR_2g096550 | 75.349 | 215 | 50 | 2 | 1 | 214 | 1 | 213 | 4.55e-116 | 329 |
| MS.gene61117.t1 | MTR_1g068740 | 96.454 | 141 | 5 | 0 | 1 | 141 | 1 | 141 | 6.14e-99 | 285 |
| MS.gene61117.t1 | MTR_1g068730 | 95.745 | 141 | 6 | 0 | 1 | 141 | 1 | 141 | 1.04e-97 | 281 |
| MS.gene61117.t1 | MTR_7g081700 | 62.439 | 205 | 67 | 4 | 11 | 213 | 4 | 200 | 9.68e-88 | 257 |
| MS.gene61117.t1 | MTR_8g006970 | 60.784 | 204 | 69 | 4 | 13 | 213 | 20 | 215 | 2.42e-83 | 247 |
| MS.gene61117.t1 | MTR_2g005500 | 55.610 | 205 | 84 | 3 | 11 | 214 | 5 | 203 | 6.65e-80 | 238 |
| MS.gene61117.t1 | MTR_8g006970 | 65.882 | 170 | 57 | 1 | 11 | 180 | 4 | 172 | 1.11e-78 | 234 |
| MS.gene61117.t1 | MTR_4g099470 | 55.866 | 179 | 69 | 4 | 37 | 213 | 6 | 176 | 1.79e-67 | 205 |
| MS.gene61117.t1 | MTR_6g021790 | 46.890 | 209 | 103 | 3 | 12 | 213 | 3 | 210 | 1.47e-60 | 189 |
| MS.gene61117.t1 | MTR_2g027660 | 46.890 | 209 | 103 | 3 | 12 | 213 | 3 | 210 | 3.18e-60 | 188 |
| MS.gene61117.t1 | MTR_3g069510 | 45.540 | 213 | 100 | 3 | 11 | 213 | 8 | 214 | 9.89e-60 | 187 |
| MS.gene61117.t1 | MTR_4g064897 | 44.240 | 217 | 104 | 3 | 7 | 213 | 4 | 213 | 1.94e-59 | 186 |
| MS.gene61117.t1 | MTR_2g014990 | 46.262 | 214 | 105 | 4 | 7 | 213 | 5 | 215 | 1.06e-57 | 181 |
| MS.gene61117.t1 | MTR_2g005510 | 44.019 | 209 | 110 | 3 | 11 | 213 | 11 | 218 | 5.16e-57 | 180 |
| MS.gene61117.t1 | MTR_4g088090 | 44.860 | 214 | 108 | 4 | 7 | 213 | 5 | 215 | 1.59e-56 | 179 |
| MS.gene61117.t1 | MTR_8g031660 | 43.627 | 204 | 112 | 2 | 12 | 213 | 3 | 205 | 2.02e-56 | 178 |
| MS.gene61117.t1 | MTR_3g086980 | 42.584 | 209 | 111 | 3 | 13 | 213 | 14 | 221 | 4.72e-56 | 177 |
| MS.gene61117.t1 | MTR_4g079350 | 45.327 | 214 | 107 | 4 | 7 | 213 | 5 | 215 | 5.94e-56 | 177 |
| MS.gene61117.t1 | MTR_1g062760 | 48.039 | 204 | 100 | 5 | 12 | 213 | 11 | 210 | 2.10e-55 | 176 |
| MS.gene61117.t1 | MTR_2g075950 | 44.340 | 212 | 112 | 2 | 7 | 213 | 5 | 215 | 4.25e-55 | 175 |
| MS.gene61117.t1 | MTR_1g078200 | 42.453 | 212 | 110 | 3 | 13 | 213 | 12 | 222 | 9.74e-55 | 174 |
| MS.gene61117.t1 | MTR_7g103070 | 46.569 | 204 | 104 | 4 | 12 | 213 | 13 | 213 | 2.38e-54 | 173 |
| MS.gene61117.t1 | MTR_2g083860 | 49.708 | 171 | 85 | 1 | 7 | 177 | 5 | 174 | 2.41e-53 | 171 |
| MS.gene61117.t1 | MTR_8g089985 | 41.935 | 217 | 102 | 4 | 13 | 213 | 15 | 223 | 4.07e-53 | 170 |
| MS.gene61117.t1 | MTR_8g031870 | 49.091 | 165 | 83 | 1 | 14 | 178 | 5 | 168 | 5.81e-53 | 169 |
| MS.gene61117.t1 | MTR_8g031680 | 42.857 | 210 | 108 | 4 | 12 | 212 | 3 | 209 | 1.15e-52 | 169 |
| MS.gene61117.t1 | MTR_7g051940 | 42.927 | 205 | 110 | 4 | 14 | 213 | 12 | 214 | 1.38e-52 | 168 |
| MS.gene61117.t1 | MTR_1g029450 | 45.894 | 207 | 102 | 7 | 11 | 213 | 13 | 213 | 2.92e-52 | 167 |
| MS.gene61117.t1 | MTR_8g093740 | 49.701 | 167 | 80 | 4 | 6 | 170 | 4 | 168 | 4.30e-52 | 167 |
| MS.gene61117.t1 | MTR_2g090865 | 43.602 | 211 | 106 | 4 | 11 | 213 | 7 | 212 | 4.86e-52 | 167 |
| MS.gene61117.t1 | MTR_1g090717 | 42.130 | 216 | 117 | 5 | 1 | 213 | 1 | 211 | 1.57e-51 | 166 |
| MS.gene61117.t1 | MTR_1g052475 | 41.204 | 216 | 108 | 4 | 13 | 214 | 13 | 223 | 4.30e-51 | 165 |
| MS.gene61117.t1 | MTR_3g096350 | 51.235 | 162 | 75 | 4 | 11 | 170 | 8 | 167 | 9.53e-51 | 164 |
| MS.gene61117.t1 | MTR_8g027220 | 46.667 | 165 | 87 | 1 | 13 | 177 | 24 | 187 | 1.35e-50 | 164 |
| MS.gene61117.t1 | MTR_8g036220 | 48.485 | 165 | 84 | 1 | 13 | 177 | 14 | 177 | 1.19e-49 | 161 |
| MS.gene61117.t1 | MTR_7g405790 | 40.000 | 210 | 112 | 5 | 14 | 213 | 14 | 219 | 3.40e-49 | 160 |
| MS.gene61117.t1 | MTR_8g031830 | 49.359 | 156 | 78 | 1 | 14 | 169 | 5 | 159 | 3.83e-49 | 159 |
| MS.gene61117.t1 | MTR_6g079550 | 47.879 | 165 | 85 | 1 | 13 | 177 | 10 | 173 | 1.95e-48 | 158 |
| MS.gene61117.t1 | MTR_0262s0050 | 39.904 | 208 | 117 | 3 | 13 | 213 | 13 | 219 | 2.63e-47 | 155 |
| MS.gene61117.t1 | MTR_2g005500 | 40.976 | 205 | 74 | 4 | 11 | 214 | 5 | 163 | 5.34e-46 | 150 |
| MS.gene61117.t1 | MTR_8g103550 | 40.704 | 199 | 106 | 5 | 17 | 214 | 11 | 198 | 4.17e-45 | 149 |
| MS.gene61117.t1 | MTR_1g094220 | 44.242 | 165 | 90 | 2 | 16 | 179 | 32 | 195 | 1.72e-44 | 147 |
| MS.gene61117.t1 | MTR_8g107070 | 49.689 | 161 | 80 | 1 | 13 | 173 | 12 | 171 | 1.77e-44 | 149 |
| MS.gene61117.t1 | MTR_3g064390 | 38.071 | 197 | 113 | 3 | 17 | 213 | 12 | 199 | 1.10e-43 | 145 |
| MS.gene61117.t1 | MTR_1g094220 | 45.283 | 159 | 85 | 2 | 16 | 173 | 32 | 189 | 2.12e-43 | 145 |
| MS.gene61117.t1 | MTR_1g094220 | 45.513 | 156 | 83 | 2 | 16 | 170 | 32 | 186 | 8.54e-43 | 143 |
| MS.gene61117.t1 | MTR_1g094220 | 45.513 | 156 | 83 | 2 | 16 | 170 | 32 | 186 | 1.23e-42 | 144 |
| MS.gene61117.t1 | MTR_5g076590 | 37.056 | 197 | 115 | 3 | 17 | 213 | 12 | 199 | 2.14e-42 | 142 |
| MS.gene61117.t1 | MTR_7g117910 | 43.312 | 157 | 87 | 2 | 7 | 163 | 12 | 166 | 2.37e-41 | 140 |
| MS.gene61117.t1 | MTR_8g090215 | 38.191 | 199 | 117 | 4 | 17 | 213 | 11 | 205 | 2.88e-41 | 139 |
| MS.gene61117.t1 | MTR_5g013900 | 36.842 | 209 | 126 | 3 | 5 | 213 | 3 | 205 | 7.12e-41 | 138 |
| MS.gene61117.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 11 | 131 | 8 | 129 | 1.37e-40 | 135 |
| MS.gene61117.t1 | MTR_3g096350 | 51.938 | 129 | 59 | 3 | 11 | 137 | 8 | 135 | 2.46e-40 | 135 |
| MS.gene61117.t1 | MTR_4g069850 | 39.130 | 207 | 112 | 7 | 5 | 202 | 2 | 203 | 3.04e-40 | 137 |
| MS.gene61117.t1 | MTR_2g102060 | 36.548 | 197 | 115 | 3 | 17 | 213 | 12 | 198 | 3.09e-40 | 136 |
| MS.gene61117.t1 | MTR_3g087160 | 36.548 | 197 | 122 | 2 | 17 | 213 | 11 | 204 | 1.89e-39 | 134 |
| MS.gene61117.t1 | MTR_4g098950 | 36.058 | 208 | 127 | 3 | 5 | 212 | 3 | 204 | 1.97e-39 | 134 |
| MS.gene61117.t1 | MTR_8g093740 | 48.062 | 129 | 64 | 3 | 44 | 170 | 8 | 135 | 1.58e-38 | 131 |
| MS.gene61117.t1 | MTR_4g012940 | 37.073 | 205 | 116 | 5 | 15 | 213 | 8 | 205 | 7.13e-37 | 128 |
| MS.gene61117.t1 | MTR_2g101890 | 36.585 | 205 | 117 | 5 | 15 | 213 | 10 | 207 | 1.67e-36 | 127 |
| MS.gene61117.t1 | MTR_7g103070 | 44.304 | 158 | 77 | 5 | 61 | 213 | 6 | 157 | 3.21e-36 | 125 |
| MS.gene61117.t1 | MTR_8g092020 | 36.765 | 204 | 115 | 4 | 15 | 212 | 12 | 207 | 6.98e-36 | 125 |
| MS.gene61117.t1 | MTR_1g097420 | 35.204 | 196 | 119 | 3 | 15 | 202 | 8 | 203 | 2.97e-34 | 121 |
| MS.gene61117.t1 | MTR_6g039490 | 36.813 | 182 | 109 | 3 | 15 | 190 | 8 | 189 | 1.59e-32 | 117 |
| MS.gene61117.t1 | MTR_3g064390 | 39.669 | 121 | 73 | 0 | 17 | 137 | 12 | 132 | 9.84e-31 | 110 |
| MS.gene61117.t1 | MTR_1g097420 | 30.942 | 223 | 119 | 4 | 15 | 202 | 8 | 230 | 4.13e-28 | 106 |
| MS.gene61117.t1 | MTR_4g088055 | 34.132 | 167 | 97 | 5 | 15 | 170 | 6 | 170 | 4.46e-27 | 102 |
| MS.gene61117.t1 | MTR_2g090875 | 33.533 | 167 | 98 | 5 | 15 | 170 | 6 | 170 | 5.94e-26 | 99.8 |
| MS.gene61117.t1 | MTR_4g073250 | 34.659 | 176 | 102 | 6 | 15 | 179 | 6 | 179 | 1.35e-25 | 99.0 |
| MS.gene61117.t1 | MTR_1g059590 | 41.358 | 162 | 87 | 3 | 18 | 179 | 398 | 551 | 2.17e-25 | 103 |
| MS.gene61117.t1 | MTR_1g059590 | 41.358 | 162 | 87 | 3 | 18 | 179 | 431 | 584 | 2.70e-25 | 103 |
| MS.gene61117.t1 | MTR_3g078260 | 32.934 | 167 | 99 | 5 | 15 | 170 | 8 | 172 | 5.70e-25 | 97.4 |
| MS.gene61117.t1 | MTR_3g107717 | 30.058 | 173 | 116 | 4 | 5 | 177 | 4 | 171 | 2.90e-24 | 95.9 |
| MS.gene61117.t1 | MTR_3g107707 | 30.058 | 173 | 116 | 4 | 5 | 177 | 4 | 171 | 3.09e-24 | 95.9 |
| MS.gene61117.t1 | MTR_3g107713 | 30.058 | 173 | 116 | 4 | 5 | 177 | 4 | 171 | 3.40e-24 | 95.9 |
| MS.gene61117.t1 | MTR_8g075240 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 1.21e-23 | 93.6 |
| MS.gene61117.t1 | MTR_5g022600 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 2.00e-23 | 93.2 |
| MS.gene61117.t1 | MTR_6g087980 | 31.737 | 167 | 101 | 5 | 15 | 170 | 6 | 170 | 2.38e-23 | 93.2 |
| MS.gene61117.t1 | MTR_8g031810 | 40.952 | 105 | 48 | 1 | 14 | 118 | 5 | 95 | 9.10e-22 | 85.9 |
| MS.gene61117.t1 | MTR_3g078260 | 34.483 | 116 | 73 | 3 | 15 | 129 | 8 | 121 | 1.13e-18 | 79.3 |
| MS.gene61117.t1 | MTR_4g113620 | 28.395 | 162 | 103 | 4 | 16 | 177 | 14 | 162 | 3.58e-18 | 79.7 |
| MS.gene61117.t1 | MTR_1452s0010 | 47.143 | 70 | 37 | 0 | 40 | 109 | 6 | 75 | 2.07e-17 | 74.7 |
| MS.gene61117.t1 | MTR_1686s0010 | 38.571 | 70 | 43 | 0 | 40 | 109 | 6 | 75 | 1.58e-13 | 64.3 |
| MS.gene61117.t1 | MTR_2g078000 | 52.174 | 46 | 22 | 0 | 76 | 121 | 46 | 91 | 3.09e-12 | 61.2 |
| MS.gene61117.t1 | MTR_5g092060 | 24.845 | 161 | 112 | 3 | 16 | 170 | 105 | 262 | 3.11e-12 | 64.7 |
| MS.gene61117.t1 | MTR_5g078090 | 31.707 | 164 | 93 | 6 | 16 | 170 | 20 | 173 | 1.03e-11 | 61.6 |
| MS.gene61117.t1 | MTR_1g069245 | 38.462 | 78 | 47 | 1 | 44 | 121 | 122 | 198 | 2.25e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61117.t1 | AT5G59840 | 94.146 | 205 | 11 | 1 | 11 | 214 | 11 | 215 | 1.49e-142 | 397 |
| MS.gene61117.t1 | AT3G46060 | 93.659 | 205 | 12 | 1 | 11 | 214 | 11 | 215 | 2.34e-142 | 396 |
| MS.gene61117.t1 | AT3G46060 | 93.659 | 205 | 12 | 1 | 11 | 214 | 11 | 215 | 2.34e-142 | 396 |
| MS.gene61117.t1 | AT3G46060 | 93.659 | 205 | 12 | 1 | 11 | 214 | 11 | 215 | 2.34e-142 | 396 |
| MS.gene61117.t1 | AT3G53610 | 92.683 | 205 | 14 | 1 | 11 | 214 | 11 | 215 | 2.21e-140 | 391 |
| MS.gene61117.t1 | AT3G53610 | 92.683 | 205 | 14 | 1 | 11 | 214 | 11 | 215 | 2.21e-140 | 391 |
| MS.gene61117.t1 | AT3G53610 | 92.683 | 205 | 14 | 1 | 11 | 214 | 11 | 215 | 2.21e-140 | 391 |
| MS.gene61117.t1 | AT5G03520 | 86.385 | 213 | 29 | 0 | 1 | 213 | 1 | 213 | 3.26e-130 | 365 |
| MS.gene61117.t1 | AT3G09900 | 84.651 | 215 | 31 | 1 | 1 | 213 | 1 | 215 | 1.18e-126 | 356 |
| MS.gene61117.t1 | AT5G03520 | 81.143 | 175 | 33 | 0 | 39 | 213 | 29 | 203 | 5.29e-103 | 296 |
| MS.gene61117.t1 | AT1G02130 | 62.136 | 206 | 67 | 4 | 11 | 213 | 4 | 201 | 1.17e-89 | 262 |
| MS.gene61117.t1 | AT5G47200 | 59.512 | 205 | 73 | 4 | 11 | 213 | 4 | 200 | 7.58e-83 | 245 |
| MS.gene61117.t1 | AT4G17530 | 59.024 | 205 | 74 | 4 | 11 | 213 | 4 | 200 | 1.38e-82 | 244 |
| MS.gene61117.t1 | AT3G11730 | 56.938 | 209 | 77 | 4 | 11 | 214 | 4 | 204 | 1.03e-80 | 239 |
| MS.gene61117.t1 | AT4G35860 | 49.048 | 210 | 99 | 4 | 12 | 214 | 3 | 211 | 1.07e-64 | 199 |
| MS.gene61117.t1 | AT4G17160 | 47.317 | 205 | 104 | 3 | 12 | 214 | 3 | 205 | 1.80e-62 | 193 |
| MS.gene61117.t1 | AT4G17170 | 47.143 | 210 | 103 | 3 | 12 | 214 | 3 | 211 | 2.92e-62 | 193 |
| MS.gene61117.t1 | AT1G09630 | 45.755 | 212 | 108 | 3 | 7 | 212 | 4 | 214 | 6.23e-59 | 185 |
| MS.gene61117.t1 | AT1G16920 | 46.262 | 214 | 104 | 4 | 7 | 213 | 5 | 214 | 1.78e-57 | 181 |
| MS.gene61117.t1 | AT4G18430 | 44.340 | 212 | 112 | 3 | 7 | 213 | 5 | 215 | 2.41e-57 | 181 |
| MS.gene61117.t1 | AT5G59150 | 42.009 | 219 | 108 | 3 | 7 | 213 | 4 | 215 | 3.89e-57 | 180 |
| MS.gene61117.t1 | AT1G07410 | 43.056 | 216 | 107 | 4 | 7 | 213 | 4 | 212 | 1.57e-56 | 179 |
| MS.gene61117.t1 | AT3G46830 | 42.922 | 219 | 106 | 4 | 7 | 213 | 4 | 215 | 2.21e-56 | 178 |
| MS.gene61117.t1 | AT3G46830 | 42.922 | 219 | 106 | 4 | 7 | 213 | 4 | 215 | 2.21e-56 | 178 |
| MS.gene61117.t1 | AT5G60860 | 44.860 | 214 | 108 | 4 | 7 | 213 | 5 | 215 | 7.32e-56 | 177 |
| MS.gene61117.t1 | AT4G39990 | 44.231 | 208 | 108 | 3 | 13 | 213 | 15 | 221 | 7.36e-56 | 177 |
| MS.gene61117.t1 | AT3G07410 | 44.762 | 210 | 103 | 5 | 13 | 213 | 10 | 215 | 4.12e-55 | 175 |
| MS.gene61117.t1 | AT3G15060 | 46.009 | 213 | 107 | 4 | 7 | 213 | 5 | 215 | 4.35e-55 | 175 |
| MS.gene61117.t1 | AT1G06400 | 43.519 | 216 | 107 | 4 | 7 | 213 | 5 | 214 | 1.41e-54 | 174 |
| MS.gene61117.t1 | AT2G33870 | 44.907 | 216 | 108 | 5 | 7 | 214 | 5 | 217 | 4.25e-54 | 172 |
| MS.gene61117.t1 | AT4G18800 | 44.393 | 214 | 106 | 4 | 7 | 213 | 5 | 212 | 9.91e-54 | 171 |
| MS.gene61117.t1 | AT1G28550 | 43.662 | 213 | 113 | 3 | 7 | 213 | 5 | 216 | 1.01e-53 | 171 |
| MS.gene61117.t1 | AT5G45750 | 43.056 | 216 | 108 | 4 | 7 | 213 | 5 | 214 | 2.33e-53 | 171 |
| MS.gene61117.t1 | AT5G47520 | 43.541 | 209 | 109 | 4 | 13 | 213 | 12 | 219 | 3.11e-53 | 170 |
| MS.gene61117.t1 | AT1G01200 | 47.337 | 169 | 89 | 0 | 13 | 181 | 26 | 194 | 7.88e-53 | 170 |
| MS.gene61117.t1 | AT1G05810 | 43.269 | 208 | 108 | 4 | 13 | 212 | 10 | 215 | 2.14e-52 | 168 |
| MS.gene61117.t1 | AT2G43130 | 41.748 | 206 | 112 | 4 | 13 | 213 | 10 | 212 | 2.44e-52 | 168 |
| MS.gene61117.t1 | AT1G05810 | 42.029 | 207 | 112 | 3 | 13 | 212 | 56 | 261 | 5.69e-52 | 169 |
| MS.gene61117.t1 | AT5G47960 | 40.952 | 210 | 115 | 3 | 13 | 214 | 13 | 221 | 6.46e-52 | 167 |
| MS.gene61117.t1 | AT1G43890 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 1.22e-51 | 166 |
| MS.gene61117.t1 | AT1G43890 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 1.22e-51 | 166 |
| MS.gene61117.t1 | AT1G43890 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 1.22e-51 | 166 |
| MS.gene61117.t1 | AT2G31680 | 47.273 | 165 | 86 | 1 | 13 | 177 | 10 | 173 | 1.23e-51 | 166 |
| MS.gene61117.t1 | AT3G12160 | 41.148 | 209 | 115 | 3 | 13 | 214 | 13 | 220 | 1.51e-51 | 166 |
| MS.gene61117.t1 | AT5G65270 | 40.758 | 211 | 114 | 5 | 13 | 213 | 15 | 224 | 2.30e-51 | 166 |
| MS.gene61117.t1 | AT1G73640 | 46.809 | 188 | 95 | 2 | 13 | 196 | 11 | 197 | 8.09e-51 | 164 |
| MS.gene61117.t1 | AT1G18200 | 50.296 | 169 | 83 | 1 | 13 | 181 | 11 | 178 | 9.65e-51 | 164 |
| MS.gene61117.t1 | AT5G03530 | 44.712 | 208 | 109 | 5 | 8 | 213 | 6 | 209 | 1.53e-50 | 163 |
| MS.gene61117.t1 | AT5G03530 | 44.712 | 208 | 109 | 5 | 8 | 213 | 6 | 209 | 1.53e-50 | 163 |
| MS.gene61117.t1 | AT3G54840 | 44.382 | 178 | 94 | 3 | 3 | 179 | 24 | 197 | 2.37e-47 | 155 |
| MS.gene61117.t1 | AT3G54840 | 46.154 | 169 | 86 | 3 | 3 | 170 | 24 | 188 | 7.28e-47 | 153 |
| MS.gene61117.t1 | AT3G54840 | 45.399 | 163 | 87 | 2 | 18 | 179 | 2 | 163 | 2.73e-46 | 151 |
| MS.gene61117.t1 | AT4G35860 | 47.273 | 165 | 79 | 4 | 57 | 214 | 2 | 165 | 7.46e-45 | 147 |
| MS.gene61117.t1 | AT3G09910 | 44.271 | 192 | 103 | 4 | 8 | 197 | 6 | 195 | 8.86e-44 | 145 |
| MS.gene61117.t1 | AT3G09910 | 44.271 | 192 | 103 | 4 | 8 | 197 | 6 | 195 | 8.86e-44 | 145 |
| MS.gene61117.t1 | AT4G19640 | 39.394 | 198 | 111 | 5 | 17 | 214 | 12 | 200 | 2.83e-43 | 144 |
| MS.gene61117.t1 | AT5G45130 | 36.869 | 198 | 116 | 3 | 17 | 214 | 12 | 200 | 5.67e-43 | 143 |
| MS.gene61117.t1 | AT2G22290 | 37.563 | 197 | 121 | 2 | 17 | 213 | 11 | 205 | 4.26e-42 | 141 |
| MS.gene61117.t1 | AT3G09910 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 6.34e-42 | 141 |
| MS.gene61117.t1 | AT3G09910 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 6.34e-42 | 141 |
| MS.gene61117.t1 | AT3G09910 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 6.34e-42 | 141 |
| MS.gene61117.t1 | AT3G18820 | 39.614 | 207 | 111 | 6 | 5 | 202 | 2 | 203 | 1.32e-41 | 140 |
| MS.gene61117.t1 | AT5G45130 | 36.224 | 196 | 116 | 3 | 19 | 214 | 22 | 208 | 4.15e-41 | 139 |
| MS.gene61117.t1 | AT4G39890 | 43.396 | 159 | 88 | 2 | 17 | 174 | 11 | 168 | 6.49e-41 | 139 |
| MS.gene61117.t1 | AT5G10260 | 36.869 | 198 | 123 | 2 | 17 | 214 | 11 | 206 | 9.88e-41 | 138 |
| MS.gene61117.t1 | AT1G52280 | 38.049 | 205 | 113 | 4 | 15 | 213 | 8 | 204 | 5.02e-38 | 131 |
| MS.gene61117.t1 | AT2G44610 | 35.749 | 207 | 127 | 3 | 5 | 211 | 3 | 203 | 1.01e-37 | 130 |
| MS.gene61117.t1 | AT5G59150 | 39.645 | 169 | 83 | 3 | 57 | 213 | 3 | 164 | 1.25e-37 | 129 |
| MS.gene61117.t1 | AT1G49300 | 36.715 | 207 | 117 | 6 | 5 | 202 | 2 | 203 | 2.45e-37 | 129 |
| MS.gene61117.t1 | AT1G49300 | 36.715 | 207 | 117 | 6 | 5 | 202 | 2 | 203 | 2.45e-37 | 129 |
| MS.gene61117.t1 | AT5G64990 | 37.879 | 198 | 119 | 3 | 17 | 212 | 9 | 204 | 3.69e-37 | 129 |
| MS.gene61117.t1 | AT4G09720 | 41.317 | 167 | 92 | 2 | 15 | 175 | 8 | 174 | 1.08e-36 | 127 |
| MS.gene61117.t1 | AT1G22740 | 39.130 | 184 | 106 | 3 | 15 | 192 | 8 | 191 | 1.57e-36 | 127 |
| MS.gene61117.t1 | AT3G16100 | 37.561 | 205 | 114 | 3 | 15 | 213 | 8 | 204 | 1.96e-36 | 127 |
| MS.gene61117.t1 | AT2G21880 | 38.323 | 167 | 97 | 2 | 15 | 175 | 9 | 175 | 4.62e-35 | 124 |
| MS.gene61117.t1 | AT4G09720 | 40.698 | 172 | 91 | 3 | 15 | 175 | 8 | 179 | 1.12e-34 | 122 |
| MS.gene61117.t1 | AT5G64990 | 36.585 | 205 | 119 | 4 | 17 | 212 | 9 | 211 | 2.02e-34 | 122 |
| MS.gene61117.t1 | AT5G39620 | 38.462 | 169 | 92 | 3 | 16 | 175 | 6 | 171 | 8.52e-34 | 120 |
| MS.gene61117.t1 | AT4G09720 | 37.640 | 178 | 94 | 2 | 15 | 175 | 8 | 185 | 2.25e-33 | 119 |
| MS.gene61117.t1 | AT4G19640 | 39.669 | 121 | 73 | 0 | 17 | 137 | 12 | 132 | 2.14e-30 | 109 |
| MS.gene61117.t1 | AT4G19640 | 39.669 | 121 | 73 | 0 | 17 | 137 | 12 | 132 | 1.18e-29 | 109 |
| MS.gene61117.t1 | AT4G09720 | 42.029 | 138 | 74 | 2 | 44 | 175 | 3 | 140 | 1.45e-27 | 103 |
| MS.gene61117.t1 | AT4G09720 | 42.029 | 138 | 74 | 2 | 44 | 175 | 3 | 140 | 1.45e-27 | 103 |
| MS.gene61117.t1 | AT4G09720 | 42.029 | 138 | 74 | 2 | 44 | 175 | 3 | 140 | 1.45e-27 | 103 |
| MS.gene61117.t1 | AT4G35020 | 36.527 | 167 | 93 | 6 | 15 | 170 | 6 | 170 | 2.46e-27 | 103 |
| MS.gene61117.t1 | AT4G35020 | 36.527 | 167 | 93 | 6 | 15 | 170 | 6 | 170 | 2.46e-27 | 103 |
| MS.gene61117.t1 | AT4G35020 | 36.527 | 167 | 93 | 6 | 15 | 170 | 6 | 170 | 2.46e-27 | 103 |
| MS.gene61117.t1 | AT2G21880 | 38.028 | 142 | 82 | 2 | 40 | 175 | 9 | 150 | 4.78e-27 | 102 |
| MS.gene61117.t1 | AT2G21880 | 38.028 | 142 | 82 | 2 | 40 | 175 | 9 | 150 | 4.78e-27 | 102 |
| MS.gene61117.t1 | AT3G48040 | 33.533 | 167 | 98 | 5 | 15 | 170 | 8 | 172 | 4.10e-26 | 100 |
| MS.gene61117.t1 | AT2G44690 | 32.335 | 167 | 100 | 5 | 15 | 170 | 18 | 182 | 7.45e-26 | 99.8 |
| MS.gene61117.t1 | AT5G62880 | 32.402 | 179 | 108 | 5 | 15 | 182 | 8 | 184 | 9.92e-26 | 99.8 |
| MS.gene61117.t1 | AT5G45970 | 31.737 | 167 | 101 | 5 | 15 | 170 | 6 | 170 | 1.05e-25 | 99.4 |
| MS.gene61117.t1 | AT2G21880 | 33.533 | 167 | 97 | 3 | 15 | 175 | 9 | 167 | 3.19e-25 | 98.2 |
| MS.gene61117.t1 | AT3G51300 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 3.24e-25 | 97.8 |
| MS.gene61117.t1 | AT1G20090 | 34.731 | 167 | 96 | 6 | 15 | 170 | 5 | 169 | 4.07e-25 | 97.4 |
| MS.gene61117.t1 | AT1G75840 | 34.132 | 167 | 97 | 6 | 15 | 170 | 6 | 170 | 4.64e-25 | 97.4 |
| MS.gene61117.t1 | AT5G55080 | 32.716 | 162 | 105 | 3 | 16 | 177 | 14 | 171 | 9.83e-25 | 97.4 |
| MS.gene61117.t1 | AT2G17800 | 33.533 | 167 | 98 | 6 | 15 | 170 | 6 | 170 | 1.61e-24 | 96.3 |
| MS.gene61117.t1 | AT2G17800 | 33.533 | 167 | 98 | 6 | 15 | 170 | 6 | 170 | 1.61e-24 | 96.3 |
| MS.gene61117.t1 | AT5G55190 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.10e-24 | 95.9 |
| MS.gene61117.t1 | AT5G20020 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.49e-24 | 95.9 |
| MS.gene61117.t1 | AT5G20010 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.56e-24 | 95.9 |
| MS.gene61117.t1 | AT4G28950 | 32.121 | 165 | 101 | 5 | 15 | 170 | 6 | 168 | 5.67e-24 | 95.1 |
| MS.gene61117.t1 | AT4G35950 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 1.24e-23 | 94.0 |
| MS.gene61117.t1 | AT3G48040 | 32.500 | 160 | 95 | 5 | 15 | 163 | 8 | 165 | 1.47e-23 | 93.2 |
| MS.gene61117.t1 | AT5G62880 | 32.500 | 160 | 95 | 5 | 15 | 163 | 8 | 165 | 1.99e-22 | 90.5 |
| MS.gene61117.t1 | AT4G35020 | 37.069 | 116 | 70 | 3 | 15 | 129 | 6 | 119 | 2.10e-19 | 81.3 |
| MS.gene61117.t1 | AT4G35020 | 37.069 | 116 | 70 | 3 | 15 | 129 | 6 | 119 | 2.10e-19 | 81.3 |
| MS.gene61117.t1 | AT5G46025 | 35.294 | 102 | 64 | 2 | 77 | 177 | 6 | 106 | 2.54e-15 | 69.7 |
| MS.gene61117.t1 | AT3G51290 | 31.469 | 143 | 85 | 6 | 44 | 175 | 636 | 776 | 1.97e-13 | 68.9 |
| MS.gene61117.t1 | AT5G37680 | 27.215 | 158 | 108 | 3 | 16 | 170 | 20 | 173 | 4.99e-12 | 62.8 |
| MS.gene61117.t1 | AT2G15310 | 28.058 | 139 | 88 | 6 | 16 | 153 | 18 | 145 | 1.60e-11 | 61.6 |
Find 54 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTAATGATTTCAGATATC+AGG | 0.258592 | 4.4:+42679410 | MS.gene61117:intron |
| AACGTATCAAGCTCCAAATT+TGG | 0.259101 | 4.4:+42679031 | MS.gene61117:CDS |
| ACCAGTTTCATCACAACTAT+TGG | 0.260192 | 4.4:+42678886 | MS.gene61117:CDS |
| GTCCTGCAGTATCCCAAATT+TGG | 0.278971 | 4.4:-42679044 | None:intergenic |
| ATCAGCCAGTGCTTGGCCTT+TGG | 0.327266 | 4.4:-42679899 | None:intergenic |
| CAAGACTCTGCAACGGGGTC+TGG | 0.345479 | 4.4:+42681121 | MS.gene61117:CDS |
| ACGTATCAAGCTCCAAATTT+GGG | 0.372566 | 4.4:+42679032 | MS.gene61117:CDS |
| ATAAGAACCATTGAACTTGA+TGG | 0.385351 | 4.4:+42679006 | MS.gene61117:CDS |
| ATCAACCAAGACTCTGCAAC+GGG | 0.391757 | 4.4:+42681115 | MS.gene61117:CDS |
| CCTTACCTGTTGTAATTGTC+CGG | 0.397162 | 4.4:-42679077 | None:intergenic |
| TGATTTCAGATATCAGGAAT+TGG | 0.400162 | 4.4:+42679416 | MS.gene61117:intron |
| CCAGTTTCATCACAACTATT+GGG | 0.400381 | 4.4:+42678887 | MS.gene61117:CDS |
| TGGTGCCATGGGCATATTGC+TGG | 0.408906 | 4.4:+42679249 | MS.gene61117:CDS |
| CAAGCACTGGCTGATGAGTA+TGG | 0.410586 | 4.4:+42679907 | MS.gene61117:CDS |
| CTTAATGAGGTAATCGTAAT+CGG | 0.415779 | 4.4:-42677812 | None:intergenic |
| TAATCGGCACGAGCCCTTGC+CGG | 0.419982 | 4.4:-42677796 | None:intergenic |
| GGTAGGGAACAAAGCAGATA+TGG | 0.426102 | 4.4:+42679486 | MS.gene61117:CDS |
| GGATAATGTTAACAAAATAC+TGG | 0.430059 | 4.4:+42679465 | MS.gene61117:CDS |
| CTCATTAAGCTTCTCTTGAT+CGG | 0.432261 | 4.4:+42677826 | MS.gene61117:CDS |
| CCCAATAGTTGTGATGAAAC+TGG | 0.436614 | 4.4:-42678887 | None:intergenic |
| CAACATTGAGCAACATGCTT+CGG | 0.444470 | 4.4:+42679444 | MS.gene61117:CDS |
| CAGATATGGACGAAAGCAAA+AGG | 0.446902 | 4.4:+42679500 | MS.gene61117:CDS |
| ACGTTTGCCATCAAGTTCAA+TGG | 0.447823 | 4.4:-42679013 | None:intergenic |
| GATGGCTGCTCCACCGGCAA+GGG | 0.449585 | 4.4:+42677783 | None:intergenic |
| CTCTGCAACGGGGTCTGGAC+AGG | 0.453418 | 4.4:+42681126 | MS.gene61117:CDS |
| CTGCAGGACAGGAACGGTTC+CGG | 0.459289 | 4.4:+42679058 | MS.gene61117:CDS |
| AGCTTACTATCGTGGTGCCA+TGG | 0.468786 | 4.4:+42679237 | MS.gene61117:intron |
| TGATGGCTGCTCCACCGGCA+AGG | 0.468923 | 4.4:+42677782 | None:intergenic |
| CAGACCCCGTTGCAGAGTCT+TGG | 0.475391 | 4.4:-42681120 | None:intergenic |
| AAATCTGCTTGCTGTGGTTG+AGG | 0.490381 | 4.4:+42681157 | MS.gene61117:CDS |
| GCTTACTATCGTGGTGCCAT+GGG | 0.506910 | 4.4:+42679238 | MS.gene61117:intron |
| AACGTCCAAAGGCCAAGCAC+TGG | 0.513872 | 4.4:+42679894 | MS.gene61117:CDS |
| CGGTTCCGGACAATTACAAC+AGG | 0.522865 | 4.4:+42679072 | MS.gene61117:CDS |
| AATGTTAACAAAATACTGGT+AGG | 0.531919 | 4.4:+42679469 | MS.gene61117:CDS |
| AGTGCTTGGCCTTTGGACGT+TGG | 0.532422 | 4.4:-42679892 | None:intergenic |
| CATACTCATCAGCCAGTGCT+TGG | 0.535062 | 4.4:-42679906 | None:intergenic |
| CTTCTCTTGATCGGCGATAG+CGG | 0.545946 | 4.4:+42677835 | MS.gene61117:CDS |
| TAGGCTGTGCCAACGTCCAA+AGG | 0.547979 | 4.4:+42679883 | MS.gene61117:intron |
| AATTTGGGATACTGCAGGAC+AGG | 0.565679 | 4.4:+42679047 | MS.gene61117:CDS |
| CTCCAAATTTGGGATACTGC+AGG | 0.565715 | 4.4:+42679042 | MS.gene61117:CDS |
| TCGGCACGAGCCCTTGCCGG+TGG | 0.580971 | 4.4:-42677793 | None:intergenic |
| AGATATGGACGAAAGCAAAA+GGG | 0.588273 | 4.4:+42679501 | MS.gene61117:CDS |
| GCTTGCTGACACTGACAACA+AGG | 0.590249 | 4.4:+42680095 | MS.gene61117:CDS |
| TGCAAAGACAAATCTAAATG+TGG | 0.596571 | 4.4:+42680032 | MS.gene61117:CDS |
| ATGTTAACAAAATACTGGTA+GGG | 0.601571 | 4.4:+42679470 | MS.gene61117:CDS |
| GGGATACTGCAGGACAGGAA+CGG | 0.617575 | 4.4:+42679052 | MS.gene61117:CDS |
| CGATCAAGAGAAGCTTAATG+AGG | 0.624299 | 4.4:-42677825 | None:intergenic |
| AAAGACAAATCTAAATGTGG+AGG | 0.631704 | 4.4:+42680035 | MS.gene61117:CDS |
| AATCAACCAAGACTCTGCAA+CGG | 0.636226 | 4.4:+42681114 | MS.gene61117:CDS |
| TGTGATGAAACTGGTAGTGA+AGG | 0.645460 | 4.4:-42678878 | None:intergenic |
| TAGCTAGAGACATAAAACAA+AGG | 0.656013 | 4.4:+42680073 | MS.gene61117:CDS |
| TGACACTGACAACAAGGCAG+AGG | 0.656933 | 4.4:+42680101 | MS.gene61117:CDS |
| ATAGACCAGCAATATGCCCA+TGG | 0.666814 | 4.4:-42679254 | None:intergenic |
| TCAACCAAGACTCTGCAACG+GGG | 0.752690 | 4.4:+42681116 | MS.gene61117:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATAAGTTTATATTAA+TGG | - | chr4.4:42678801-42678820 | None:intergenic | 10.0% |
| !! | ATTTAAATTATTAATTCCAT+TGG | - | chr4.4:42680697-42680716 | None:intergenic | 10.0% |
| !! | TTAATTTCAAAATCAATTAA+TGG | + | chr4.4:42680363-42680382 | MS.gene61117:intron | 10.0% |
| !!! | AGTATCTTTTATATATATAT+GGG | - | chr4.4:42680977-42680996 | None:intergenic | 10.0% |
| !!! | TAGTATCTTTTATATATATA+TGG | - | chr4.4:42680978-42680997 | None:intergenic | 10.0% |
| !!! | TTAATTGATTTTGAAATTAA+AGG | - | chr4.4:42680363-42680382 | None:intergenic | 10.0% |
| !! | AAAGAAAAGAATGAAATTAT+TGG | - | chr4.4:42680607-42680626 | None:intergenic | 15.0% |
| !! | ATTACACAAAATATATATAG+AGG | + | chr4.4:42680286-42680305 | MS.gene61117:intron | 15.0% |
| !! | ATTGAATAATAGTAATTGTT+AGG | + | chr4.4:42680391-42680410 | MS.gene61117:intron | 15.0% |
| !! | GTATTAAACAAAAAAATTGT+GGG | - | chr4.4:42678292-42678311 | None:intergenic | 15.0% |
| !! | TGTATTAAACAAAAAAATTG+TGG | - | chr4.4:42678293-42678312 | None:intergenic | 15.0% |
| !! | TGTTATTGTAATGTAAATTA+TGG | + | chr4.4:42678065-42678084 | MS.gene61117:intron | 15.0% |
| !! | TTGAATAATAGTAATTGTTA+GGG | + | chr4.4:42680392-42680411 | MS.gene61117:intron | 15.0% |
| !!! | AATAATTTCATTCTTTTCTT+TGG | + | chr4.4:42680606-42680625 | MS.gene61117:intron | 15.0% |
| !!! | GTATCTTTTATATATATATG+GGG | - | chr4.4:42680976-42680995 | None:intergenic | 15.0% |
| !!! | TTTTGTTTAATACACAAATT+AGG | + | chr4.4:42678299-42678318 | MS.gene61117:intron | 15.0% |
| !! | ACAAACAATGATTCAAATAA+TGG | - | chr4.4:42678046-42678065 | None:intergenic | 20.0% |
| !! | ACCGTATAATAATATAAACT+AGG | + | chr4.4:42677895-42677914 | MS.gene61117:intron | 20.0% |
| !! | CAAACAATGATTCAAATAAT+GGG | - | chr4.4:42678045-42678064 | None:intergenic | 20.0% |
| !! | CCCTAGTTTATATTATTATA+CGG | - | chr4.4:42677899-42677918 | None:intergenic | 20.0% |
| !! | CCGTATAATAATATAAACTA+GGG | + | chr4.4:42677896-42677915 | MS.gene61117:intron | 20.0% |
| !! | GTTGGATTAAAAATAATTGA+GGG | + | chr4.4:42680899-42680918 | MS.gene61117:intron | 20.0% |
| !! | TAATAAAAAGAAAACCTATG+AGG | - | chr4.4:42679111-42679130 | None:intergenic | 20.0% |
| !! | TATACTATGATAATAAGATC+TGG | + | chr4.4:42680727-42680746 | MS.gene61117:intron | 20.0% |
| !! | TGAAATTATTGGAATCTAAA+TGG | - | chr4.4:42680596-42680615 | None:intergenic | 20.0% |
| !! | TGTTGGATTAAAAATAATTG+AGG | + | chr4.4:42680898-42680917 | MS.gene61117:intron | 20.0% |
| !! | TTAAAATCAATACTGCATTA+AGG | - | chr4.4:42678985-42679004 | None:intergenic | 20.0% |
| !! | TTCAAAATCAATTAATGGTT+AGG | + | chr4.4:42680368-42680387 | MS.gene61117:intron | 20.0% |
| !! | TTTGTCATTGTCAATAATTT+GGG | - | chr4.4:42678179-42678198 | None:intergenic | 20.0% |
| !!! | AAATTGATTTTGTCATGATA+AGG | - | chr4.4:42680473-42680492 | None:intergenic | 20.0% |
| !!! | ATTTGTTATTTATCAACTGT+TGG | - | chr4.4:42679781-42679800 | None:intergenic | 20.0% |
| !!! | CTGCAAAAAACAAATATTTT+AGG | - | chr4.4:42679219-42679238 | None:intergenic | 20.0% |
| !!! | GATTTGTTTTAAATTGTGAA+AGG | + | chr4.4:42677992-42678011 | MS.gene61117:intron | 20.0% |
| !!! | TAAATAAACTTTAAAGCTGT+TGG | + | chr4.4:42680881-42680900 | MS.gene61117:intron | 20.0% |
| ! | AAACTTATAAGCTAAGAGAA+TGG | - | chr4.4:42678241-42678260 | None:intergenic | 25.0% |
| ! | AATATCGTATCGTGTAAATA+AGG | - | chr4.4:42681002-42681021 | None:intergenic | 25.0% |
| ! | AATGTTAACAAAATACTGGT+AGG | + | chr4.4:42679469-42679488 | MS.gene61117:CDS | 25.0% |
| ! | ACACAAAATATATATAGAGG+AGG | + | chr4.4:42680289-42680308 | MS.gene61117:intron | 25.0% |
| ! | ACGGTAAAAAATACATAGAA+GGG | - | chr4.4:42677880-42677899 | None:intergenic | 25.0% |
| ! | ATACAGAGTCGATATTATAT+AGG | + | chr4.4:42680245-42680264 | MS.gene61117:intron | 25.0% |
| ! | ATACTTCATTATGTAAACCA+AGG | - | chr4.4:42678722-42678741 | None:intergenic | 25.0% |
| ! | ATGTAAATTATGGTATCAAG+AGG | + | chr4.4:42678075-42678094 | MS.gene61117:intron | 25.0% |
| ! | ATGTTAACAAAATACTGGTA+GGG | + | chr4.4:42679470-42679489 | MS.gene61117:CDS | 25.0% |
| ! | ATTACTGCAATTGTAATGAA+CGG | - | chr4.4:42678156-42678175 | None:intergenic | 25.0% |
| ! | CACAAAATATATATAGAGGA+GGG | + | chr4.4:42680290-42680309 | MS.gene61117:intron | 25.0% |
| ! | CTTTGTCATTGTCAATAATT+TGG | - | chr4.4:42678180-42678199 | None:intergenic | 25.0% |
| ! | GGATAATGTTAACAAAATAC+TGG | + | chr4.4:42679465-42679484 | MS.gene61117:CDS | 25.0% |
| ! | TAAGTTTATAGACTTACTCT+TGG | - | chr4.4:42680327-42680346 | None:intergenic | 25.0% |
| ! | TACGGTAAAAAATACATAGA+AGG | - | chr4.4:42677881-42677900 | None:intergenic | 25.0% |
| ! | TGAAATTAAAGGTCATGATT+TGG | - | chr4.4:42680352-42680371 | None:intergenic | 25.0% |
| ! | TTCTAATGATTTCAGATATC+AGG | + | chr4.4:42679410-42679429 | MS.gene61117:intron | 25.0% |
| !! | AACTATTGGGTATGATTTTA+TGG | + | chr4.4:42678900-42678919 | MS.gene61117:intron | 25.0% |
| !! | CTTTTATATATATATGGGGA+GGG | - | chr4.4:42680972-42680991 | None:intergenic | 25.0% |
| !! | GTACTTTTACCTTTCTTTTT+AGG | + | chr4.4:42679864-42679883 | MS.gene61117:intron | 25.0% |
| !! | TAAACATTTTTGTTGACGAA+CGG | + | chr4.4:42679721-42679740 | MS.gene61117:intron | 25.0% |
| !! | TCTTTTATATATATATGGGG+AGG | - | chr4.4:42680973-42680992 | None:intergenic | 25.0% |
| !!! | AAAAGGTATCACAAAACATT+AGG | - | chr4.4:42681073-42681092 | None:intergenic | 25.0% |
| !!! | ATTTTGTTATTGTTCTTCAC+AGG | + | chr4.4:42678814-42678833 | MS.gene61117:intron | 25.0% |
| !!! | TTTGACCTTGTTTTTGATTT+GGG | + | chr4.4:42677970-42677989 | MS.gene61117:intron | 25.0% |
| !!! | TTTTGACCTTGTTTTTGATT+TGG | + | chr4.4:42677969-42677988 | MS.gene61117:intron | 25.0% |
| !!! | TTTTTTTTCTTCCTTTCCAT+GGG | + | chr4.4:42679373-42679392 | MS.gene61117:intron | 25.0% |
| AAAGACAAATCTAAATGTGG+AGG | + | chr4.4:42680035-42680054 | MS.gene61117:CDS | 30.0% | |
| AAATTCTTCGAAACTGTAAG+TGG | + | chr4.4:42679934-42679953 | MS.gene61117:intron | 30.0% | |
| AAGGTTGAATTGCATTGTTA+AGG | + | chr4.4:42679666-42679685 | MS.gene61117:intron | 30.0% | |
| ACCTTCTTGTGTAAAATACA+GGG | + | chr4.4:42678532-42678551 | MS.gene61117:intron | 30.0% | |
| AGCAACACAGTTATTCAAAT+TGG | - | chr4.4:42678753-42678772 | None:intergenic | 30.0% | |
| AGGTAATTGAGATCAACTAA+AGG | - | chr4.4:42678440-42678459 | None:intergenic | 30.0% | |
| AGTACATTTGACAACTGTAA+AGG | - | chr4.4:42679619-42679638 | None:intergenic | 30.0% | |
| ATAAGAACCATTGAACTTGA+TGG | + | chr4.4:42679006-42679025 | MS.gene61117:CDS | 30.0% | |
| CAAATCCCAAATCAAAAACA+AGG | - | chr4.4:42677978-42677997 | None:intergenic | 30.0% | |
| CAAATGTTACATAAGAACGA+AGG | + | chr4.4:42677924-42677943 | MS.gene61117:intron | 30.0% | |
| CGGTAAAAAATACATAGAAG+GGG | - | chr4.4:42677879-42677898 | None:intergenic | 30.0% | |
| CTTAATGAGGTAATCGTAAT+CGG | - | chr4.4:42677815-42677834 | None:intergenic | 30.0% | |
| GATCTCAAAATGTACTTCTT+TGG | + | chr4.4:42680562-42680581 | MS.gene61117:intron | 30.0% | |
| GGTAAAAAATACATAGAAGG+GGG | - | chr4.4:42677878-42677897 | None:intergenic | 30.0% | |
| GGTAATTGAGATCAACTAAA+GGG | - | chr4.4:42678439-42678458 | None:intergenic | 30.0% | |
| GTAAATTTGCATGACGATTA+TGG | - | chr4.4:42679643-42679662 | None:intergenic | 30.0% | |
| GTAATTGAGATCAACTAAAG+GGG | - | chr4.4:42678438-42678457 | None:intergenic | 30.0% | |
| TAATAGTAATTGTTAGGGTG+AGG | + | chr4.4:42680397-42680416 | MS.gene61117:intron | 30.0% | |
| TAATCGTCATGCAAATTTAC+TGG | + | chr4.4:42679643-42679662 | MS.gene61117:intron | 30.0% | |
| TAATGAACGGATCACATAAA+AGG | - | chr4.4:42678143-42678162 | None:intergenic | 30.0% | |
| TAGCTAGAGACATAAAACAA+AGG | + | chr4.4:42680073-42680092 | MS.gene61117:CDS | 30.0% | |
| TGATTTCAGATATCAGGAAT+TGG | + | chr4.4:42679416-42679435 | MS.gene61117:intron | 30.0% | |
| TGCAAAGACAAATCTAAATG+TGG | + | chr4.4:42680032-42680051 | MS.gene61117:CDS | 30.0% | |
| TGTACAATACACTAATTGGT+GGG | + | chr4.4:42678563-42678582 | MS.gene61117:intron | 30.0% | |
| TGTGATATTAGAGAAATCTC+AGG | - | chr4.4:42678956-42678975 | None:intergenic | 30.0% | |
| TTAGAGACATGAAACTATGA+CGG | - | chr4.4:42680163-42680182 | None:intergenic | 30.0% | |
| TTAGGTAATCCCAATTTAAG+AGG | + | chr4.4:42680644-42680663 | MS.gene61117:intron | 30.0% | |
| ! | AAACATTTTTGTTGACGAAC+GGG | + | chr4.4:42679722-42679741 | MS.gene61117:intron | 30.0% |
| ! | ATCTGAAATCATTAGAAGCT+AGG | - | chr4.4:42679407-42679426 | None:intergenic | 30.0% |
| ! | ATTTTGTTGAGTGTGTTTAG+AGG | + | chr4.4:42680833-42680852 | MS.gene61117:intron | 30.0% |
| ! | GTGTATTTTACCTGAAAATG+TGG | + | chr4.4:42679956-42679975 | MS.gene61117:intron | 30.0% |
| ! | TGAAAGGTTTGATCTTTTCA+TGG | + | chr4.4:42678008-42678027 | MS.gene61117:intron | 30.0% |
| !! | TTGTTTTATGTCTCTAGCTA+TGG | - | chr4.4:42680073-42680092 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTCTTCCTTTCCA+TGG | + | chr4.4:42679372-42679391 | MS.gene61117:intron | 30.0% |
| !!! | TGATTTGTTTTTGTCGTTTG+CGG | + | chr4.4:42680798-42680817 | MS.gene61117:intron | 30.0% |
| AACAGTAATGTTCCTTTCTG+TGG | + | chr4.4:42679301-42679320 | MS.gene61117:intron | 35.0% | |
| AACGTATCAAGCTCCAAATT+TGG | + | chr4.4:42679031-42679050 | MS.gene61117:CDS | 35.0% | |
| AAGCATCTCACCTCTTAAAT+TGG | - | chr4.4:42680657-42680676 | None:intergenic | 35.0% | |
| AATAATTGAGGGCTGAGATT+TGG | + | chr4.4:42680910-42680929 | MS.gene61117:intron | 35.0% | |
| AATTTAAGAGGTGAGATGCT+TGG | + | chr4.4:42680656-42680675 | MS.gene61117:intron | 35.0% | |
| ACCAGTTTCATCACAACTAT+TGG | + | chr4.4:42678886-42678905 | MS.gene61117:CDS | 35.0% | |
| ACGTATCAAGCTCCAAATTT+GGG | + | chr4.4:42679032-42679051 | MS.gene61117:CDS | 35.0% | |
| ACTAGTAGTCTAGTACGTAT+AGG | + | chr4.4:42678386-42678405 | MS.gene61117:intron | 35.0% | |
| AGATATGGACGAAAGCAAAA+GGG | + | chr4.4:42679501-42679520 | MS.gene61117:CDS | 35.0% | |
| AGCATCTCACCTCTTAAATT+GGG | - | chr4.4:42680656-42680675 | None:intergenic | 35.0% | |
| AGGTAATTGAGATCACCTAA+AGG | - | chr4.4:42678652-42678671 | None:intergenic | 35.0% | |
| ATTTAAGAGGTGAGATGCTT+GGG | + | chr4.4:42680657-42680676 | MS.gene61117:intron | 35.0% | |
| CACCTTCTTGTGTAAAATAC+AGG | + | chr4.4:42678531-42678550 | MS.gene61117:intron | 35.0% | |
| CATTTGACAACTGTAAAGGT+TGG | - | chr4.4:42679615-42679634 | None:intergenic | 35.0% | |
| CCAGTTTCATCACAACTATT+GGG | + | chr4.4:42678887-42678906 | MS.gene61117:CDS | 35.0% | |
| CTCATTAAGCTTCTCTTGAT+CGG | + | chr4.4:42677826-42677845 | MS.gene61117:CDS | 35.0% | |
| CTTGTGTAAAATACAGGGTA+AGG | + | chr4.4:42678537-42678556 | MS.gene61117:intron | 35.0% | |
| GACTCTGTATTTCGAAAACA+CGG | - | chr4.4:42680235-42680254 | None:intergenic | 35.0% | |
| GAGAGAAAAGTAGAAAGACA+TGG | + | chr4.4:42680204-42680223 | MS.gene61117:intron | 35.0% | |
| GCTGTGTACAATACACTAAT+TGG | + | chr4.4:42678559-42678578 | MS.gene61117:intron | 35.0% | |
| GGGATAATTATTGTAGCCAA+TGG | + | chr4.4:42680678-42680697 | MS.gene61117:intron | 35.0% | |
| GGTAATTGAGATCACCTAAA+GGG | - | chr4.4:42678651-42678670 | None:intergenic | 35.0% | |
| GTAAGGTTTATGATCCTCAT+AGG | + | chr4.4:42679094-42679113 | MS.gene61117:intron | 35.0% | |
| GTAATTGAGATCACCTAAAG+GGG | - | chr4.4:42678650-42678669 | None:intergenic | 35.0% | |
| GTGTACAATACACTAATTGG+TGG | + | chr4.4:42678562-42678581 | MS.gene61117:intron | 35.0% | |
| TAAGTTTAGAGACCTACTCT+TGG | + | chr4.4:42680935-42680954 | MS.gene61117:intron | 35.0% | |
| TACACAAATTAGGCCTTAAG+CGG | + | chr4.4:42678309-42678328 | MS.gene61117:intron | 35.0% | |
| TAGAGACATGAAACTATGAC+GGG | - | chr4.4:42680162-42680181 | None:intergenic | 35.0% | |
| TGGATCGAATTCTTACCAAA+TGG | - | chr4.4:42678364-42678383 | None:intergenic | 35.0% | |
| TTATTGTTCTTCACAGGTGT+TGG | + | chr4.4:42678820-42678839 | MS.gene61117:intron | 35.0% | |
| TTCAAACTAAAGCCACAGAA+AGG | - | chr4.4:42679316-42679335 | None:intergenic | 35.0% | |
| ! | AAAGGGTATGCAAACTTTGT+TGG | + | chr4.4:42679518-42679537 | MS.gene61117:intron | 35.0% |
| ! | AACATTTTTGTTGACGAACG+GGG | + | chr4.4:42679723-42679742 | MS.gene61117:intron | 35.0% |
| ! | ACCCTGTATTTTACACAAGA+AGG | - | chr4.4:42678536-42678555 | None:intergenic | 35.0% |
| ! | CTTCTTTTGCGTTTTTCTGA+TGG | + | chr4.4:42678853-42678872 | MS.gene61117:CDS | 35.0% |
| ! | GCTTTTGTGTGAAACATACT+TGG | + | chr4.4:42678770-42678789 | MS.gene61117:intron | 35.0% |
| ! | GGTTTAATTGTTTTCTCCAC+TGG | + | chr4.4:42680418-42680437 | MS.gene61117:intron | 35.0% |
| !! | AGAGTCTTGGTTGATTTTGA+TGG | - | chr4.4:42681110-42681129 | None:intergenic | 35.0% |
| !! | TGGTTGATTTTGATGGTTGT+TGG | - | chr4.4:42681103-42681122 | None:intergenic | 35.0% |
| !! | TGTAAAGGTTGGTTTACAGA+GGG | - | chr4.4:42679604-42679623 | None:intergenic | 35.0% |
| !!! | GATATTTTGACTCCAAGAGT+AGG | - | chr4.4:42680331-42680312 | None:intergenic | 35.0% |
| !!! | TTTTTTGCAGCTTACTATCG+TGG | + | chr4.4:42679229-42679248 | MS.gene61117:intron | 35.0% |
| AAACATTAGGCTCGTGAGAA+AGG | - | chr4.4:42681060-42681079 | None:intergenic | 40.0% | |
| AACATTAGGCTCGTGAGAAA+GGG | - | chr4.4:42681059-42681078 | None:intergenic | 40.0% | |
| AATCAACCAAGACTCTGCAA+CGG | + | chr4.4:42681114-42681133 | MS.gene61117:CDS | 40.0% | |
| ACGTACTAGACTACTAGTCA+TGG | - | chr4.4:42678384-42678403 | None:intergenic | 40.0% | |
| ACGTTTGCCATCAAGTTCAA+TGG | - | chr4.4:42679016-42679035 | None:intergenic | 40.0% | |
| CAACATTGAGCAACATGCTT+CGG | + | chr4.4:42679444-42679463 | MS.gene61117:CDS | 40.0% | |
| CAGATATGGACGAAAGCAAA+AGG | + | chr4.4:42679500-42679519 | MS.gene61117:CDS | 40.0% | |
| CCCAATAGTTGTGATGAAAC+TGG | - | chr4.4:42678890-42678909 | None:intergenic | 40.0% | |
| CCTTACCTGTTGTAATTGTC+CGG | - | chr4.4:42679080-42679099 | None:intergenic | 40.0% | |
| CGATCAAGAGAAGCTTAATG+AGG | - | chr4.4:42677828-42677847 | None:intergenic | 40.0% | |
| CGTCATGCAAATTTACTGGA+AGG | + | chr4.4:42679647-42679666 | MS.gene61117:intron | 40.0% | |
| CTCATTCAACATGAGAGAAG+AGG | - | chr4.4:42680187-42680206 | None:intergenic | 40.0% | |
| GTTTCGGTCTCTTAACCATT+TGG | + | chr4.4:42678346-42678365 | MS.gene61117:intron | 40.0% | |
| TGGATGAACGCAGAATTCTT+AGG | + | chr4.4:42680626-42680645 | MS.gene61117:intron | 40.0% | |
| TGTTGAGTGTGTTTAGAGGA+AGG | + | chr4.4:42680837-42680856 | MS.gene61117:intron | 40.0% | |
| TTAGTTCACTCACAGCAACA+TGG | - | chr4.4:42679704-42679723 | None:intergenic | 40.0% | |
| TTGATCTCAATTACCTCGAG+TGG | + | chr4.4:42678444-42678463 | MS.gene61117:intron | 40.0% | |
| TTGGCACAGCCTAAAAAGAA+AGG | - | chr4.4:42679876-42679895 | None:intergenic | 40.0% | |
| TTTAAGAGGTGAGATGCTTG+GGG | + | chr4.4:42680658-42680677 | MS.gene61117:intron | 40.0% | |
| ! | AACGTTTTGTGGTATTCCAG+TGG | - | chr4.4:42680437-42680456 | None:intergenic | 40.0% |
| ! | AAGAGGGTTGAGTTCTGATT+TGG | + | chr4.4:42679753-42679772 | MS.gene61117:intron | 40.0% |
| ! | CAGAGAGTTTCCACATTTTC+AGG | - | chr4.4:42679969-42679988 | None:intergenic | 40.0% |
| ! | TGGTTGTTGGCTGCAATAAA+AGG | - | chr4.4:42681090-42681109 | None:intergenic | 40.0% |
| ! | TGTGATGAAACTGGTAGTGA+AGG | - | chr4.4:42678881-42678900 | None:intergenic | 40.0% |
| ! | TTGCAGCAACAAACGTTTTG+TGG | - | chr4.4:42680448-42680467 | None:intergenic | 40.0% |
| !! | CTGTAAAGGTTGGTTTACAG+AGG | - | chr4.4:42679605-42679624 | None:intergenic | 40.0% |
| !! | GTAAAGGTTGGTTTACAGAG+GGG | - | chr4.4:42679603-42679622 | None:intergenic | 40.0% |
| !! | TAAAGGTTGGTTTACAGAGG+GGG | - | chr4.4:42679602-42679621 | None:intergenic | 40.0% |
| !! | TTACACAAGAAGGTGTTTCC+AGG | - | chr4.4:42678526-42678545 | None:intergenic | 40.0% |
| AAGCTAGGTGAATACTCCCA+TGG | - | chr4.4:42679392-42679411 | None:intergenic | 45.0% | |
| ACCTAAAGGGGCTGACATAA+AGG | - | chr4.4:42678638-42678657 | None:intergenic | 45.0% | |
| AGACCGAAACATCTACCACT+TGG | - | chr4.4:42678336-42678355 | None:intergenic | 45.0% | |
| AGGTGAATACTCCCATGGAA+AGG | - | chr4.4:42679387-42679406 | None:intergenic | 45.0% | |
| ATAGACCAGCAATATGCCCA+TGG | - | chr4.4:42679257-42679276 | None:intergenic | 45.0% | |
| ATCAACCAAGACTCTGCAAC+GGG | + | chr4.4:42681115-42681134 | MS.gene61117:CDS | 45.0% | |
| CCGGACAATTACAACAGGTA+AGG | + | chr4.4:42679077-42679096 | MS.gene61117:intron | 45.0% | |
| CCTAAAGGGGCTGACATAAA+GGG | - | chr4.4:42678637-42678656 | None:intergenic | 45.0% | |
| GAAACACGCTGTTTGACTGT+TGG | + | chr4.4:42679164-42679183 | MS.gene61117:intron | 45.0% | |
| GGTAGGGAACAAAGCAGATA+TGG | + | chr4.4:42679486-42679505 | MS.gene61117:CDS | 45.0% | |
| GGTCCAAGTGGTAGATGTTT+CGG | + | chr4.4:42678330-42678349 | MS.gene61117:intron | 45.0% | |
| GTCCTGCAGTATCCCAAATT+TGG | - | chr4.4:42679047-42679066 | None:intergenic | 45.0% | |
| GTGATCTCAATTACCTCGAG+TGG | + | chr4.4:42678656-42678675 | MS.gene61117:intron | 45.0% | |
| GTGTGTTTAGAGGAAGGAAG+CGG | + | chr4.4:42680843-42680862 | MS.gene61117:intron | 45.0% | |
| TCACTTGTCACGTGACTGAA+AGG | + | chr4.4:42678486-42678505 | MS.gene61117:intron | 45.0% | |
| ! | AATTTGGGATACTGCAGGAC+AGG | + | chr4.4:42679047-42679066 | MS.gene61117:CDS | 45.0% |
| ! | ATTTTTGTTGACGAACGGGG+AGG | + | chr4.4:42679726-42679745 | MS.gene61117:intron | 45.0% |
| ! | CTCCAAATTTGGGATACTGC+AGG | + | chr4.4:42679042-42679061 | MS.gene61117:CDS | 45.0% |
| ! | GCACAAAAATCTGCTTGCTG+TGG | + | chr4.4:42681151-42681170 | MS.gene61117:CDS | 45.0% |
| !! | AAAGGTTGGTTTACAGAGGG+GGG | - | chr4.4:42679601-42679620 | None:intergenic | 45.0% |
| !! | GTTTTTGTCGTTTGCGGCAA+GGG | + | chr4.4:42680804-42680823 | MS.gene61117:intron | 45.0% |
| !! | TGTTTTTGTCGTTTGCGGCA+AGG | + | chr4.4:42680803-42680822 | MS.gene61117:intron | 45.0% |
| AAGGTCACGAGTTCAAGTCC+TGG | + | chr4.4:42678505-42678524 | MS.gene61117:intron | 50.0% | |
| ACACACACATACGAGAGAGG+AGG | - | chr4.4:42679809-42679828 | None:intergenic | 50.0% | |
| AGAGGAAGGAAGCGGAAAAG+TGG | + | chr4.4:42680851-42680870 | MS.gene61117:intron | 50.0% | |
| CACTAAAGCTCCCGCATACA+CGG | - | chr4.4:42678604-42678623 | None:intergenic | 50.0% | |
| CATACTCATCAGCCAGTGCT+TGG | - | chr4.4:42679909-42679928 | None:intergenic | 50.0% | |
| CCCTTTATGTCAGCCCCTTT+AGG | + | chr4.4:42678634-42678653 | MS.gene61117:intron | 50.0% | |
| CGGTTCCGGACAATTACAAC+AGG | + | chr4.4:42679072-42679091 | MS.gene61117:CDS | 50.0% | |
| CTTCTCTTGATCGGCGATAG+CGG | + | chr4.4:42677835-42677854 | MS.gene61117:CDS | 50.0% | |
| CTTTACTGTTGCACCACTCG+AGG | - | chr4.4:42678460-42678479 | None:intergenic | 50.0% | |
| GACACACACACATACGAGAG+AGG | - | chr4.4:42679812-42679831 | None:intergenic | 50.0% | |
| GCTGTTTGACTGTTGGCATC+TGG | + | chr4.4:42679171-42679190 | MS.gene61117:intron | 50.0% | |
| TCAACCAAGACTCTGCAACG+GGG | + | chr4.4:42681116-42681135 | MS.gene61117:CDS | 50.0% | |
| TCTACCACTTGGACCGCTTA+AGG | - | chr4.4:42678325-42678344 | None:intergenic | 50.0% | |
| TGACACTGACAACAAGGCAG+AGG | + | chr4.4:42680101-42680120 | MS.gene61117:CDS | 50.0% | |
| ! | AGCTTACTATCGTGGTGCCA+TGG | + | chr4.4:42679237-42679256 | MS.gene61117:intron | 50.0% |
| ! | ATGCGGGAGCTTTAGTGCAT+CGG | + | chr4.4:42678607-42678626 | MS.gene61117:intron | 50.0% |
| ! | GCTTGCTGACACTGACAACA+AGG | + | chr4.4:42680095-42680114 | MS.gene61117:CDS | 50.0% |
| !! | AAGGTTGGTTTACAGAGGGG+GGG | - | chr4.4:42679600-42679619 | None:intergenic | 50.0% |
| !! | CAAGCACTGGCTGATGAGTA+TGG | + | chr4.4:42679907-42679926 | MS.gene61117:CDS | 50.0% |
| !! | GCTTACTATCGTGGTGCCAT+GGG | + | chr4.4:42679238-42679257 | MS.gene61117:intron | 50.0% |
| AACGTCCAAAGGCCAAGCAC+TGG | + | chr4.4:42679894-42679913 | MS.gene61117:CDS | 55.0% | |
| CGTTGCACGCTGAGATACCT+TGG | + | chr4.4:42678702-42678721 | MS.gene61117:intron | 55.0% | |
| GCAGACACACTAACCACTCG+AGG | - | chr4.4:42678672-42678691 | None:intergenic | 55.0% | |
| GGGATACTGCAGGACAGGAA+CGG | + | chr4.4:42679052-42679071 | MS.gene61117:CDS | 55.0% | |
| TAGGCCTTAAGCGGTCCAAG+TGG | + | chr4.4:42678318-42678337 | MS.gene61117:intron | 55.0% | |
| TAGGCTGTGCCAACGTCCAA+AGG | + | chr4.4:42679883-42679902 | MS.gene61117:intron | 55.0% | |
| ! | AGTGCTTGGCCTTTGGACGT+TGG | - | chr4.4:42679895-42679914 | None:intergenic | 55.0% |
| ! | ATCAGCCAGTGCTTGGCCTT+TGG | - | chr4.4:42679902-42679921 | None:intergenic | 55.0% |
| ! | TGCGGGAGCTTTAGTGCATC+GGG | + | chr4.4:42678608-42678627 | MS.gene61117:intron | 55.0% |
| !! | AGGTTGGTTTACAGAGGGGG+GGG | - | chr4.4:42679599-42679618 | None:intergenic | 55.0% |
| !! | TGGTGCCATGGGCATATTGC+TGG | + | chr4.4:42679249-42679268 | MS.gene61117:CDS | 55.0% |
| ACGAACGGGGAGGTTCGAAG+AGG | + | chr4.4:42679736-42679755 | MS.gene61117:intron | 60.0% | |
| CAAGACTCTGCAACGGGGTC+TGG | + | chr4.4:42681121-42681140 | MS.gene61117:CDS | 60.0% | |
| CAGACCCCGTTGCAGAGTCT+TGG | - | chr4.4:42681123-42681142 | None:intergenic | 60.0% | |
| CATACACGGCGTCTGGGAAG+GGG | - | chr4.4:42678590-42678609 | None:intergenic | 60.0% | |
| CGAACGGGGAGGTTCGAAGA+GGG | + | chr4.4:42679737-42679756 | MS.gene61117:intron | 60.0% | |
| CTGCAGGACAGGAACGGTTC+CGG | + | chr4.4:42679058-42679077 | MS.gene61117:CDS | 60.0% | |
| CTTCCCAGACGCCGTGTATG+CGG | + | chr4.4:42678590-42678609 | MS.gene61117:intron | 60.0% | |
| GCATACACGGCGTCTGGGAA+GGG | - | chr4.4:42678591-42678610 | None:intergenic | 60.0% | |
| GGGGGAACGAAAAAGGCAGG+AGG | - | chr4.4:42679575-42679594 | None:intergenic | 60.0% | |
| TAATCGGCACGAGCCCTTGC+CGG | - | chr4.4:42677799-42677818 | None:intergenic | 60.0% | |
| TTCCCAGACGCCGTGTATGC+GGG | + | chr4.4:42678591-42678610 | MS.gene61117:intron | 60.0% | |
| TTGGTTTACAGAGGGGGGGG+GGG | - | chr4.4:42679596-42679615 | None:intergenic | 60.0% | |
| ! | GTTGGTTTACAGAGGGGGGG+GGG | - | chr4.4:42679597-42679616 | None:intergenic | 60.0% |
| !! | GGTTGGTTTACAGAGGGGGG+GGG | - | chr4.4:42679598-42679617 | None:intergenic | 60.0% |
| CGCATACACGGCGTCTGGGA+AGG | - | chr4.4:42678592-42678611 | None:intergenic | 65.0% | |
| CTCCCGCATACACGGCGTCT+GGG | - | chr4.4:42678596-42678615 | None:intergenic | 65.0% | |
| CTCTGCAACGGGGTCTGGAC+AGG | + | chr4.4:42681126-42681145 | MS.gene61117:CDS | 65.0% | |
| GGGGGGGGAACGAAAAAGGC+AGG | - | chr4.4:42679578-42679597 | None:intergenic | 65.0% | |
| TGGTTTACAGAGGGGGGGGG+GGG | - | chr4.4:42679595-42679614 | None:intergenic | 65.0% | |
| GCTCCCGCATACACGGCGTC+TGG | - | chr4.4:42678597-42678616 | None:intergenic | 70.0% | |
| GGGGGGGGGGGGAACGAAAA+AGG | - | chr4.4:42679582-42679601 | None:intergenic | 70.0% | |
| GGTTTACAGAGGGGGGGGGG+GGG | - | chr4.4:42679594-42679613 | None:intergenic | 70.0% | |
| GTTTACAGAGGGGGGGGGGG+GGG | - | chr4.4:42679593-42679612 | None:intergenic | 70.0% | |
| TCGGCACGAGCCCTTGCCGG+TGG | - | chr4.4:42677796-42677815 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 42677784 | 42681177 | 42677784 | ID=MS.gene61117 |
| chr4.4 | mRNA | 42677784 | 42681177 | 42677784 | ID=MS.gene61117.t1;Parent=MS.gene61117 |
| chr4.4 | exon | 42677784 | 42677856 | 42677784 | ID=MS.gene61117.t1.exon1;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42677784 | 42677856 | 42677784 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| chr4.4 | exon | 42678836 | 42678908 | 42678836 | ID=MS.gene61117.t1.exon2;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42678836 | 42678908 | 42678836 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| chr4.4 | exon | 42678993 | 42679093 | 42678993 | ID=MS.gene61117.t1.exon3;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42678993 | 42679093 | 42678993 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| chr4.4 | exon | 42679239 | 42679304 | 42679239 | ID=MS.gene61117.t1.exon4;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42679239 | 42679304 | 42679239 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| chr4.4 | exon | 42679425 | 42679522 | 42679425 | ID=MS.gene61117.t1.exon5;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42679425 | 42679522 | 42679425 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| chr4.4 | exon | 42679886 | 42679948 | 42679886 | ID=MS.gene61117.t1.exon6;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42679886 | 42679948 | 42679886 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| chr4.4 | exon | 42680030 | 42680122 | 42680030 | ID=MS.gene61117.t1.exon7;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42680030 | 42680122 | 42680030 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| chr4.4 | exon | 42681100 | 42681177 | 42681100 | ID=MS.gene61117.t1.exon8;Parent=MS.gene61117.t1 |
| chr4.4 | CDS | 42681100 | 42681177 | 42681100 | ID=cds.MS.gene61117.t1;Parent=MS.gene61117.t1 |
| Gene Sequence |
| Protein sequence |
