Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68063.t1 | XP_003612170.2 | 86.4 | 435 | 49 | 4 | 1 | 431 | 11 | 439 | 1.70E-133 | 486.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68063.t1 | Q05753 | 43.6 | 280 | 145 | 4 | 13 | 283 | 7 | 282 | 3.9e-54 | 213.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68063.t1 | G7JW80 | 86.4 | 435 | 49 | 4 | 1 | 431 | 1 | 429 | 1.2e-133 | 486.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene68063 | 0.811601 | 6.45E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene68063 | 0.815437 | 9.25E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene68063 | 0.804992 | 1.66E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene68063 | 0.849611 | 2.89E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene68063 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene05079 | MS.gene68063 | -0.814078 | 1.85E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene68063 | 0.807839 | 4.15E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene68063 | 0.822436 | 2.37E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene68063 | 0.807581 | 4.71E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene68063 | 0.81565 | 8.29E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene68063 | 0.850879 | 1.28E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene68063 | 0.828323 | 9.58E-55 | -1.69E-46 |
| MS.gene051949 | MS.gene68063 | 0.845147 | 4.87E-59 | -1.69E-46 |
| MS.gene052290 | MS.gene68063 | 0.805227 | 1.48E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene68063 | 0.81048 | 1.13E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene68063 | 0.856071 | 4.12E-62 | -1.69E-46 |
| MS.gene052872 | MS.gene68063 | 0.854075 | 1.57E-61 | -1.69E-46 |
| MS.gene053009 | MS.gene68063 | 0.825566 | 4.37E-54 | -1.69E-46 |
| MS.gene053384 | MS.gene68063 | 0.81167 | 6.23E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene68063 | 0.812249 | 4.66E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene68063 | 0.825506 | 4.52E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene68063 | 0.811616 | 6.40E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene68063 | 0.835987 | 1.22E-56 | -1.69E-46 |
| MS.gene054290 | MS.gene68063 | -0.81502 | 1.14E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene68063 | 0.819804 | 9.58E-53 | -1.69E-46 |
| MS.gene054955 | MS.gene68063 | 0.830807 | 2.39E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene68063 | 0.824509 | 7.77E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene68063 | 0.819837 | 9.42E-53 | -1.69E-46 |
| MS.gene055397 | MS.gene68063 | 0.804906 | 1.72E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene68063 | 0.807297 | 5.41E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene68063 | 0.817152 | 3.82E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene68063 | 0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene68063 | 0.816719 | 4.78E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene68063 | 0.80656 | 7.75E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene68063 | -0.807799 | 4.24E-50 | -1.69E-46 |
| MS.gene056903 | MS.gene68063 | 0.868845 | 4.82E-66 | -1.69E-46 |
| MS.gene056947 | MS.gene68063 | 0.814794 | 1.29E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene68063 | 0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene68063 | 0.81574 | 7.92E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene68063 | 0.815567 | 8.65E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene68063 | 0.813551 | 2.42E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene68063 | 0.840025 | 1.11E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene68063 | 0.803825 | 2.90E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene68063 | 0.802247 | 6.14E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene68063 | 0.810413 | 1.17E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene68063 | 0.818237 | 2.18E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene68063 | 0.801366 | 9.32E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene68063 | 0.805174 | 1.52E-49 | -1.69E-46 |
| MS.gene05986 | MS.gene68063 | 0.806619 | 7.53E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene68063 | 0.842504 | 2.48E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene68063 | 0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene68063 | 0.820438 | 6.86E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene68063 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene060818 | MS.gene68063 | 0.842558 | 2.40E-58 | -1.69E-46 |
| MS.gene060832 | MS.gene68063 | 0.823357 | 1.45E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene68063 | 0.853394 | 2.46E-61 | -1.69E-46 |
| MS.gene06111 | MS.gene68063 | 0.801073 | 1.07E-48 | -1.69E-46 |
| MS.gene061200 | MS.gene68063 | 0.811754 | 5.98E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68063.t1 | MTR_5g022050 | 91.954 | 435 | 25 | 4 | 1 | 431 | 1 | 429 | 0.0 | 762 |
| MS.gene68063.t1 | MTR_5g023090 | 74.783 | 460 | 69 | 8 | 1 | 420 | 1 | 453 | 0.0 | 627 |
| MS.gene68063.t1 | MTR_5g022050 | 91.160 | 362 | 22 | 4 | 1 | 358 | 11 | 366 | 0.0 | 618 |
| MS.gene68063.t1 | MTR_2g048680 | 46.703 | 182 | 96 | 1 | 237 | 417 | 123 | 304 | 7.46e-53 | 179 |
| MS.gene68063.t1 | MTR_2g048680 | 48.466 | 163 | 84 | 0 | 255 | 417 | 62 | 224 | 1.95e-50 | 170 |
| MS.gene68063.t1 | MTR_5g043640 | 33.088 | 136 | 91 | 0 | 262 | 397 | 91 | 226 | 1.62e-16 | 79.3 |
| MS.gene68063.t1 | MTR_5g043640 | 32.353 | 136 | 89 | 1 | 265 | 397 | 58 | 193 | 2.71e-15 | 75.9 |
| MS.gene68063.t1 | MTR_5g026800 | 32.117 | 137 | 92 | 1 | 265 | 400 | 15 | 151 | 8.07e-15 | 74.7 |
| MS.gene68063.t1 | MTR_4g092760 | 29.825 | 171 | 112 | 3 | 237 | 406 | 40 | 203 | 1.06e-12 | 70.1 |
| MS.gene68063.t1 | MTR_5g077770 | 36.364 | 154 | 92 | 2 | 264 | 417 | 591 | 738 | 4.85e-12 | 68.6 |
| MS.gene68063.t1 | MTR_7g020860 | 38.095 | 84 | 52 | 0 | 326 | 409 | 739 | 822 | 9.62e-12 | 67.4 |
| MS.gene68063.t1 | MTR_6g027840 | 28.649 | 185 | 130 | 2 | 246 | 429 | 195 | 378 | 1.10e-11 | 67.0 |
| MS.gene68063.t1 | MTR_4g113530 | 33.088 | 136 | 88 | 2 | 265 | 399 | 555 | 688 | 1.32e-11 | 67.0 |
| MS.gene68063.t1 | MTR_7g115280 | 27.632 | 152 | 108 | 2 | 253 | 404 | 114 | 263 | 5.92e-11 | 64.7 |
| MS.gene68063.t1 | MTR_3g014090 | 27.011 | 174 | 113 | 4 | 244 | 403 | 485 | 658 | 7.77e-11 | 65.1 |
| MS.gene68063.t1 | MTR_3g491870 | 33.000 | 100 | 65 | 1 | 303 | 400 | 244 | 343 | 8.41e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68063.t1 | AT5G66055 | 52.482 | 423 | 187 | 6 | 13 | 425 | 7 | 425 | 1.87e-148 | 429 |
| MS.gene68063.t1 | AT5G66055 | 49.300 | 357 | 168 | 5 | 13 | 360 | 7 | 359 | 7.21e-112 | 333 |
| MS.gene68063.t1 | AT5G40160 | 48.352 | 182 | 93 | 1 | 237 | 417 | 127 | 308 | 9.26e-54 | 182 |
| MS.gene68063.t1 | AT5G40160 | 48.077 | 156 | 80 | 1 | 237 | 391 | 127 | 282 | 1.15e-44 | 157 |
| MS.gene68063.t1 | AT4G27780 | 40.506 | 79 | 47 | 0 | 322 | 400 | 261 | 339 | 9.20e-13 | 69.7 |
| MS.gene68063.t1 | AT2G25600 | 32.857 | 140 | 92 | 1 | 265 | 404 | 581 | 718 | 1.27e-12 | 70.5 |
| MS.gene68063.t1 | AT4G19150 | 26.708 | 161 | 113 | 2 | 265 | 424 | 20 | 176 | 3.26e-12 | 66.6 |
| MS.gene68063.t1 | AT2G03430 | 30.435 | 138 | 96 | 0 | 260 | 397 | 82 | 219 | 3.47e-12 | 66.6 |
| MS.gene68063.t1 | AT2G14255 | 31.333 | 150 | 100 | 2 | 253 | 399 | 83 | 232 | 8.65e-12 | 67.4 |
| MS.gene68063.t1 | AT5G53470 | 36.709 | 79 | 50 | 0 | 322 | 400 | 246 | 324 | 1.32e-11 | 65.9 |
| MS.gene68063.t1 | AT5G13300 | 33.663 | 101 | 65 | 1 | 316 | 416 | 718 | 816 | 2.24e-11 | 66.6 |
Find 83 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTATTTGTAGGATAAA+TGG | 0.153410 | 5.3:+12891968 | MS.gene68063:intron |
| TTCTTCTTTGAAATTGAAAT+TGG | 0.200442 | 5.3:-12890085 | None:intergenic |
| AATCCTAGATGGGCTGTTTA+TGG | 0.219355 | 5.3:+12890412 | MS.gene68063:CDS |
| CAGTTGAAGCCTTTGGTTCT+TGG | 0.229120 | 5.3:+12890316 | MS.gene68063:CDS |
| AGAATCTTGTTCCTGATAAA+TGG | 0.230329 | 5.3:+12890131 | MS.gene68063:CDS |
| TGAACTTCTTTCCATTTATC+AGG | 0.246691 | 5.3:-12890142 | None:intergenic |
| GCTCTTTACAAAGCGGTAAT+TGG | 0.259504 | 5.3:+12892179 | MS.gene68063:CDS |
| GTTGATTCCTTCGAGGGATA+TGG | 0.264643 | 5.3:+12890252 | MS.gene68063:CDS |
| TTTGAAATTGAAATTGGTTT+TGG | 0.269853 | 5.3:-12890079 | None:intergenic |
| GTGAAGCTTCTGCTGATTAA+AGG | 0.274738 | 5.3:+12892992 | MS.gene68063:CDS |
| GGCTTATAAAGAAGCTAAAT+TGG | 0.277637 | 5.3:+12890291 | MS.gene68063:CDS |
| TATGGATTTGAATGAGTATA+AGG | 0.293852 | 5.3:+12890270 | MS.gene68063:CDS |
| GTCTGTCGGGAGCGTCTATA+AGG | 0.356780 | 5.3:-12894258 | None:intergenic |
| GACTCTGCTGCTATGAAAAC+TGG | 0.356814 | 5.3:+12890481 | MS.gene68063:CDS |
| ATTGGCTCAGTTGAAGCCTT+TGG | 0.368198 | 5.3:+12890309 | MS.gene68063:CDS |
| TGATGTTGATATTAATGTTA+TGG | 0.368619 | 5.3:+12892053 | MS.gene68063:CDS |
| CAATGTGGATATAAATCTTC+AGG | 0.373575 | 5.3:+12892822 | MS.gene68063:CDS |
| AAGAAGAGTGTGTGGGGTTG+TGG | 0.374765 | 5.3:-12889836 | None:intergenic |
| TCTCAAGAGACTGTTGGTTA+TGG | 0.380991 | 5.3:-12892213 | None:intergenic |
| TGATATTAATGTTATGGATA+AGG | 0.387981 | 5.3:+12892059 | MS.gene68063:CDS |
| ATCCTAGATGGGCTGTTTAT+GGG | 0.393025 | 5.3:+12890413 | MS.gene68063:CDS |
| TAGTGCCTAGGAATCCTAGA+TGG | 0.397952 | 5.3:+12890401 | MS.gene68063:CDS |
| ACAAGAGTACTTTAATTGTT+CGG | 0.397986 | 5.3:-12892795 | None:intergenic |
| CTCACATTATCTTGCACAAA+CGG | 0.408366 | 5.3:-12892248 | None:intergenic |
| GAAGCCTTTGGTTCTTGGTA+AGG | 0.419470 | 5.3:+12890321 | MS.gene68063:CDS |
| AGATGGGCTGTTTATGGGAG+AGG | 0.423749 | 5.3:+12890418 | MS.gene68063:CDS |
| TTCTTCTTATCCCCGTCTGT+CGG | 0.435105 | 5.3:-12894272 | None:intergenic |
| TTGCTGTGTCTTAGGATGGC+TGG | 0.440960 | 5.3:+12892927 | MS.gene68063:intron |
| CGGAGACTGTCTTGTCTTCG+AGG | 0.443191 | 5.3:+12889994 | MS.gene68063:CDS |
| TCTTCTTATCCCCGTCTGTC+GGG | 0.451834 | 5.3:-12894271 | None:intergenic |
| GTCGTCCTAGGTTGTTTACC+AGG | 0.463875 | 5.3:+12891615 | MS.gene68063:CDS |
| ACGAGGTTGTTGTCGGAAGT+TGG | 0.464298 | 5.3:-12890043 | None:intergenic |
| AAAGTTATGAAGAAGAAAAG+AGG | 0.482187 | 5.3:+12890229 | MS.gene68063:CDS |
| ACAGCCCATCTAGGATTCCT+AGG | 0.499470 | 5.3:-12890406 | None:intergenic |
| TTTATCAGGAACAAGATTCT+CGG | 0.500203 | 5.3:-12890128 | None:intergenic |
| GTTGTTTACGAGGTTGTTGT+CGG | 0.500244 | 5.3:-12890050 | None:intergenic |
| CTCGACCTTTGCCTTTACTC+TGG | 0.500612 | 5.3:+12894192 | MS.gene68063:CDS |
| CTCCCATAAACAGCCCATCT+AGG | 0.507590 | 5.3:-12890415 | None:intergenic |
| GAAGATGATGAAGAAGAAGA+AGG | 0.510543 | 5.3:+12890358 | MS.gene68063:CDS |
| GTTGTTTACCAGGGAGGAGA+GGG | 0.513400 | 5.3:+12891625 | MS.gene68063:CDS |
| CTTCGTAGTTGTTGTCATGT+TGG | 0.515970 | 5.3:-12889961 | None:intergenic |
| AAGTTATGAAGAAGAAAAGA+GGG | 0.517219 | 5.3:+12890230 | MS.gene68063:CDS |
| AGGTGGGTTGAGTGATGAGA+GGG | 0.518172 | 5.3:+12890378 | MS.gene68063:CDS |
| GAAGTAGCAACTGACAAGTC+TGG | 0.525281 | 5.3:-12891668 | None:intergenic |
| GATGATGAAGAAGAAGAAGG+TGG | 0.525802 | 5.3:+12890361 | MS.gene68063:CDS |
| CGAGTTTCTCAAGAGACTGT+TGG | 0.526379 | 5.3:-12892219 | None:intergenic |
| ATGGAGAGAAGAAGAGTGTG+TGG | 0.526930 | 5.3:-12889844 | None:intergenic |
| TGGAGAGAAGAAGAGTGTGT+GGG | 0.527588 | 5.3:-12889843 | None:intergenic |
| GACTGTCTTGTCTTCGAGGA+AGG | 0.528284 | 5.3:+12889998 | MS.gene68063:CDS |
| TGTTTATGGGAGAGGTTTCG+AGG | 0.529560 | 5.3:+12890426 | MS.gene68063:CDS |
| TATAGACGCTCCCGACAGAC+GGG | 0.545707 | 5.3:+12894261 | MS.gene68063:CDS |
| AAAGAGGGTTGATTCCTTCG+AGG | 0.548485 | 5.3:+12890245 | MS.gene68063:CDS |
| CAACAAATCCCTCTCCTCCC+TGG | 0.550164 | 5.3:-12891633 | None:intergenic |
| GTCTGAACAGCAAGATGTAA+TGG | 0.552014 | 5.3:-12892953 | None:intergenic |
| AAGAGGGTTGATTCCTTCGA+GGG | 0.552504 | 5.3:+12890246 | MS.gene68063:CDS |
| ATGATGAAGAAGAAGAAGGT+GGG | 0.553208 | 5.3:+12890362 | MS.gene68063:CDS |
| AAGGTGGGTTGAGTGATGAG+AGG | 0.562680 | 5.3:+12890377 | MS.gene68063:CDS |
| GAGTAAAGGCAAAGGTCGAG+TGG | 0.584489 | 5.3:-12894189 | None:intergenic |
| TTGTACAGCATAGTGAATCA+AGG | 0.589301 | 5.3:-12892761 | None:intergenic |
| AGTGCCTAGGAATCCTAGAT+GGG | 0.592539 | 5.3:+12890402 | MS.gene68063:CDS |
| AGATTGAAACTTGCGAGGTG+TGG | 0.593440 | 5.3:-12889888 | None:intergenic |
| CAACAGTCTCTTGAGAAACT+CGG | 0.594452 | 5.3:+12892220 | MS.gene68063:CDS |
| TTATAGACGCTCCCGACAGA+CGG | 0.598131 | 5.3:+12894260 | MS.gene68063:CDS |
| GGTTGTTTACCAGGGAGGAG+AGG | 0.600499 | 5.3:+12891624 | MS.gene68063:CDS |
| TCGTCCTAGGTTGTTTACCA+GGG | 0.600545 | 5.3:+12891616 | MS.gene68063:CDS |
| AGTACTCTTGTTGTACAATG+TGG | 0.602365 | 5.3:+12892807 | MS.gene68063:CDS |
| TTCAAATCCATATCCCTCGA+AGG | 0.611215 | 5.3:-12890259 | None:intergenic |
| AATTACCGCTTTGTAAAGAG+CGG | 0.611856 | 5.3:-12892177 | None:intergenic |
| TAAACATAACGAAGAAAGAA+CGG | 0.615305 | 5.3:+12890173 | MS.gene68063:CDS |
| GTGATGAGAGGGTAGTGCCT+AGG | 0.618143 | 5.3:+12890389 | MS.gene68063:CDS |
| TGAAAAGATTGAAACTTGCG+AGG | 0.619228 | 5.3:-12889893 | None:intergenic |
| CTTGCAGCAAAAGTGTGCAA+AGG | 0.619949 | 5.3:-12891994 | None:intergenic |
| TTGTGGATTACGAACAAGTG+TGG | 0.636734 | 5.3:-12889819 | None:intergenic |
| TCCTAGGTTGTTTACCAGGG+AGG | 0.641807 | 5.3:+12891619 | MS.gene68063:CDS |
| GGAGAGAAGAAGAGTGTGTG+GGG | 0.642297 | 5.3:-12889842 | None:intergenic |
| AACTACGAAGAACACATCAT+CGG | 0.651971 | 5.3:+12889974 | MS.gene68063:CDS |
| TCCTCCCTGGTAAACAACCT+AGG | 0.653160 | 5.3:-12891620 | None:intergenic |
| AAAACCTTACCAAGAACCAA+AGG | 0.660134 | 5.3:-12890325 | None:intergenic |
| TTTGACCAGAGTAAAGGCAA+AGG | 0.667685 | 5.3:-12894197 | None:intergenic |
| ATAGACGCTCCCGACAGACG+GGG | 0.691778 | 5.3:+12894262 | MS.gene68063:CDS |
| TTTGACCGCTCTTTACAAAG+CGG | 0.710243 | 5.3:+12892172 | MS.gene68063:CDS |
| TCTGCTGCTATGAAAACTGG+AGG | 0.737144 | 5.3:+12890484 | MS.gene68063:CDS |
| TACAGCATAGTGAATCAAGG+TGG | 0.739803 | 5.3:-12892758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTTATAAAATAGAAG+CGG | + | chr5.3:12893359-12893378 | MS.gene68063:intron | 10.0% |
| !! | AACTATATGTTAATAGATTA+AGG | - | chr5.3:12892658-12892677 | None:intergenic | 15.0% |
| !! | ACTATATGTTAATAGATTAA+GGG | - | chr5.3:12892657-12892676 | None:intergenic | 15.0% |
| !! | ATAATTTATAAAATAGAAGC+GGG | + | chr5.3:12893360-12893379 | MS.gene68063:intron | 15.0% |
| !! | TTACATTGATAGATTAATAT+AGG | - | chr5.3:12893061-12893080 | None:intergenic | 15.0% |
| !! | AAAAAAGGGAAAAAATACAA+TGG | - | chr5.3:12893184-12893203 | None:intergenic | 20.0% |
| !! | AAAAAGGGAAAAAATACAAT+GGG | - | chr5.3:12893183-12893202 | None:intergenic | 20.0% |
| !! | AAAACTAAAAGTTGTTACAT+AGG | - | chr5.3:12890572-12890591 | None:intergenic | 20.0% |
| !! | AAACACAATAGTTTAAATAG+AGG | - | chr5.3:12892130-12892149 | None:intergenic | 20.0% |
| !! | AAATATCACTGTAAAAGAAA+TGG | - | chr5.3:12894128-12894147 | None:intergenic | 20.0% |
| !! | AACTAAATATTCATCAATCA+CGG | - | chr5.3:12893940-12893959 | None:intergenic | 20.0% |
| !! | ATGAAAAAGTTGAGATATAA+AGG | + | chr5.3:12891197-12891216 | MS.gene68063:intron | 20.0% |
| !! | CATGAATACTAATTTATACA+CGG | + | chr5.3:12892084-12892103 | MS.gene68063:intron | 20.0% |
| !! | TAACAGTACAAAATATAATG+AGG | - | chr5.3:12891745-12891764 | None:intergenic | 20.0% |
| !! | TGATATTAATGTTATGGATA+AGG | + | chr5.3:12892059-12892078 | MS.gene68063:CDS | 20.0% |
| !! | TGATCAGAAATTAAAAAACA+AGG | + | chr5.3:12893018-12893037 | MS.gene68063:CDS | 20.0% |
| !! | TGATGTTGATATTAATGTTA+TGG | + | chr5.3:12892053-12892072 | MS.gene68063:CDS | 20.0% |
| !!! | AAAACTTTCAACTGTTATTT+AGG | + | chr5.3:12893721-12893740 | MS.gene68063:intron | 20.0% |
| !!! | AATTCTTTAGAAAATAGAAG+TGG | + | chr5.3:12893492-12893511 | MS.gene68063:intron | 20.0% |
| !!! | ATATCATAATATTTTGTCTG+TGG | + | chr5.3:12894023-12894042 | MS.gene68063:intron | 20.0% |
| !!! | ATGGACATTTTGAAAAATAA+GGG | + | chr5.3:12891064-12891083 | MS.gene68063:intron | 20.0% |
| !!! | ATTATATTTTGTACTGTTAC+CGG | + | chr5.3:12891746-12891765 | MS.gene68063:intron | 20.0% |
| !!! | CTCTATATTTATGTTTTCAA+TGG | + | chr5.3:12891939-12891958 | MS.gene68063:intron | 20.0% |
| !!! | TATGGACATTTTGAAAAATA+AGG | + | chr5.3:12891063-12891082 | MS.gene68063:intron | 20.0% |
| !!! | TGTTGGTTAAAACAAATTTA+TGG | + | chr5.3:12891119-12891138 | MS.gene68063:intron | 20.0% |
| !!! | TGTTTTGTTTTACTTTTTCA+AGG | + | chr5.3:12892145-12892164 | MS.gene68063:intron | 20.0% |
| !!! | TTATATCTCAACTTTTTCAT+AGG | - | chr5.3:12891197-12891216 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTGAAATTGAAAT+TGG | - | chr5.3:12890088-12890107 | None:intergenic | 20.0% |
| !!! | TTTGAAATTGAAATTGGTTT+TGG | - | chr5.3:12890082-12890101 | None:intergenic | 20.0% |
| !!! | TTTGTATTTACAATCTGTTT+TGG | + | chr5.3:12890510-12890529 | MS.gene68063:intron | 20.0% |
| ! | AAAGTTATGAAGAAGAAAAG+AGG | + | chr5.3:12890229-12890248 | MS.gene68063:CDS | 25.0% |
| ! | AAGTTATGAAGAAGAAAAGA+GGG | + | chr5.3:12890230-12890249 | MS.gene68063:CDS | 25.0% |
| ! | AATATGCTGAAAACAACTTA+TGG | + | chr5.3:12892539-12892558 | MS.gene68063:intron | 25.0% |
| ! | CAGCCTTTCAAAAAAAAAAA+GGG | + | chr5.3:12893252-12893271 | MS.gene68063:intron | 25.0% |
| ! | CTAAGTCATTAAAAACCTAT+CGG | + | chr5.3:12893688-12893707 | MS.gene68063:intron | 25.0% |
| ! | CTCATTATTTGTAGGATAAA+TGG | + | chr5.3:12891968-12891987 | MS.gene68063:intron | 25.0% |
| ! | GAAATTTGATTGTGATGAAA+TGG | + | chr5.3:12891462-12891481 | MS.gene68063:intron | 25.0% |
| ! | GTAAGAAAATCAACAGATAA+AGG | - | chr5.3:12892319-12892338 | None:intergenic | 25.0% |
| ! | TAAACATAACGAAGAAAGAA+CGG | + | chr5.3:12890173-12890192 | MS.gene68063:CDS | 25.0% |
| ! | TATGGATTTGAATGAGTATA+AGG | + | chr5.3:12890270-12890289 | MS.gene68063:CDS | 25.0% |
| ! | TCAAAAAAAAAAAGGGTCAT+TGG | + | chr5.3:12893259-12893278 | MS.gene68063:intron | 25.0% |
| ! | TCAGCCTTTCAAAAAAAAAA+AGG | + | chr5.3:12893251-12893270 | MS.gene68063:intron | 25.0% |
| ! | TGTATTGCTCTTATTGTTTA+GGG | + | chr5.3:12890842-12890861 | MS.gene68063:intron | 25.0% |
| ! | TTACTTCAACATCAAAACAA+AGG | - | chr5.3:12891794-12891813 | None:intergenic | 25.0% |
| ! | TTCTCATTGTTTGCAATATA+TGG | + | chr5.3:12891542-12891561 | MS.gene68063:intron | 25.0% |
| ! | TTGTATTGCTCTTATTGTTT+AGG | + | chr5.3:12890841-12890860 | MS.gene68063:intron | 25.0% |
| !! | ACATGTATTCTTTAGAAAAC+AGG | + | chr5.3:12893556-12893575 | MS.gene68063:intron | 25.0% |
| !! | TATTCATTGATGGTTAAATC+CGG | + | chr5.3:12891492-12891511 | MS.gene68063:intron | 25.0% |
| !! | TGAATATAGATGCTTTTAAC+TGG | + | chr5.3:12893110-12893129 | MS.gene68063:intron | 25.0% |
| !! | TGAATATAGGTGCTTTTAAT+GGG | + | chr5.3:12893384-12893403 | MS.gene68063:intron | 25.0% |
| !! | TGGATCATTTTATTCATTGA+TGG | + | chr5.3:12891482-12891501 | MS.gene68063:intron | 25.0% |
| !!! | ACAAGAGTACTTTAATTGTT+CGG | - | chr5.3:12892798-12892817 | None:intergenic | 25.0% |
| !!! | TACTTTTAGAATCTTTGTTG+CGG | + | chr5.3:12892028-12892047 | MS.gene68063:CDS | 25.0% |
| !!! | TATGCTTGTTAGATAACTTT+TGG | + | chr5.3:12890988-12891007 | MS.gene68063:intron | 25.0% |
| !!! | TATTTTTGTTAATGCTGTTG+AGG | + | chr5.3:12890536-12890555 | MS.gene68063:intron | 25.0% |
| !!! | TGACCCTTTTTTTTTTTGAA+AGG | - | chr5.3:12893258-12893277 | None:intergenic | 25.0% |
| !!! | TGGATTTGCTTTTGATTTAT+GGG | + | chr5.3:12891092-12891111 | MS.gene68063:intron | 25.0% |
| !!! | TGTTGCATTTTTTTCAATGT+TGG | + | chr5.3:12891856-12891875 | MS.gene68063:intron | 25.0% |
| !!! | TTGGATTTGCTTTTGATTTA+TGG | + | chr5.3:12891091-12891110 | MS.gene68063:intron | 25.0% |
| !!! | TTGTTTTACTTTTTCAAGGA+TGG | + | chr5.3:12892149-12892168 | MS.gene68063:intron | 25.0% |
| AAAAAACTCGCGGATAAAAA+AGG | - | chr5.3:12893199-12893218 | None:intergenic | 30.0% | |
| AAAAACTCGCGGATAAAAAA+GGG | - | chr5.3:12893198-12893217 | None:intergenic | 30.0% | |
| AAAGAAGAAAAAGAAGACAG+TGG | + | chr5.3:12890099-12890118 | MS.gene68063:CDS | 30.0% | |
| AAGCAAATGCATAGAATATC+AGG | - | chr5.3:12892708-12892727 | None:intergenic | 30.0% | |
| AGAATCTTGTTCCTGATAAA+TGG | + | chr5.3:12890131-12890150 | MS.gene68063:CDS | 30.0% | |
| AGTTAGGTGATTTAGATGAA+AGG | + | chr5.3:12893611-12893630 | MS.gene68063:intron | 30.0% | |
| ATATAGAGATTACTTACCGA+AGG | - | chr5.3:12891927-12891946 | None:intergenic | 30.0% | |
| ATCCAAAATGGCTCTTAAAT+TGG | + | chr5.3:12891322-12891341 | MS.gene68063:intron | 30.0% | |
| CAAACACATGTATTTACGTT+TGG | + | chr5.3:12890637-12890656 | MS.gene68063:intron | 30.0% | |
| CAATGTGGATATAAATCTTC+AGG | + | chr5.3:12892822-12892841 | MS.gene68063:CDS | 30.0% | |
| GAGGTAGAAAAGCTAATTAT+TGG | - | chr5.3:12892868-12892887 | None:intergenic | 30.0% | |
| GCATAAAATGAATATCTTCC+CGG | - | chr5.3:12891514-12891533 | None:intergenic | 30.0% | |
| GGCTAATACTCATTATTTGT+AGG | + | chr5.3:12891960-12891979 | MS.gene68063:intron | 30.0% | |
| GGCTTATAAAGAAGCTAAAT+TGG | + | chr5.3:12890291-12890310 | MS.gene68063:CDS | 30.0% | |
| TGAACTTCTTTCCATTTATC+AGG | - | chr5.3:12890145-12890164 | None:intergenic | 30.0% | |
| TGACACAATAATCTATGAAG+CGG | - | chr5.3:12890712-12890731 | None:intergenic | 30.0% | |
| TGATAACAATGATGAATTCC+CGG | - | chr5.3:12892375-12892394 | None:intergenic | 30.0% | |
| TTATATCCTTAGTTACCTGT+TGG | + | chr5.3:12892679-12892698 | MS.gene68063:intron | 30.0% | |
| TTGGAGAAGTTTATCCAAAA+TGG | + | chr5.3:12891310-12891329 | MS.gene68063:intron | 30.0% | |
| TTTATCAGGAACAAGATTCT+CGG | - | chr5.3:12890131-12890150 | None:intergenic | 30.0% | |
| TTTCATCTAAATCACCTAAC+TGG | - | chr5.3:12893612-12893631 | None:intergenic | 30.0% | |
| TTTGAAAAATAAGGGTGGTT+TGG | + | chr5.3:12891072-12891091 | MS.gene68063:intron | 30.0% | |
| TTTGTTTATATTGCCATCCT+AGG | - | chr5.3:12891442-12891461 | None:intergenic | 30.0% | |
| ! | ATTCACTTGTTTGTTACCTT+CGG | + | chr5.3:12891908-12891927 | MS.gene68063:intron | 30.0% |
| ! | ATTCATTGATGGTTAAATCC+GGG | + | chr5.3:12891493-12891512 | MS.gene68063:intron | 30.0% |
| ! | CGATAGGTTTTTAATGACTT+AGG | - | chr5.3:12893690-12893709 | None:intergenic | 30.0% |
| ! | CTGAATATAGGTGCTTTTAA+TGG | + | chr5.3:12893383-12893402 | MS.gene68063:intron | 30.0% |
| ! | GAATCATAATAGAAGTGTAG+GGG | + | chr5.3:12891878-12891897 | MS.gene68063:intron | 30.0% |
| ! | GGAATCATAATAGAAGTGTA+GGG | + | chr5.3:12891877-12891896 | MS.gene68063:intron | 30.0% |
| ! | TAATAGATTAAGGGCATGTT+TGG | - | chr5.3:12892648-12892667 | None:intergenic | 30.0% |
| ! | TCTCTTCAGATAAGTGTTTT+TGG | + | chr5.3:12891291-12891310 | MS.gene68063:intron | 30.0% |
| ! | TCTTTCATGCTTTTGTGTAT+AGG | + | chr5.3:12891593-12891612 | MS.gene68063:intron | 30.0% |
| ! | TGAATTTTGTTCTCAAACAG+TGG | - | chr5.3:12892906-12892925 | None:intergenic | 30.0% |
| ! | TGGAATCATAATAGAAGTGT+AGG | + | chr5.3:12891876-12891895 | MS.gene68063:intron | 30.0% |
| !! | AAATTCATTTGCTGTGTCTT+AGG | + | chr5.3:12892919-12892938 | MS.gene68063:intron | 30.0% |
| !! | AGGCTTGATTGAATTTGTTT+TGG | + | chr5.3:12893912-12893931 | MS.gene68063:intron | 30.0% |
| !! | ATTTGTCTTTTGTTTGTCTC+AGG | + | chr5.3:12894155-12894174 | MS.gene68063:intron | 30.0% |
| !! | GACATTTTGAAAAATAAGGG+TGG | + | chr5.3:12891067-12891086 | MS.gene68063:intron | 30.0% |
| !! | TATGAAATGTATTGGTGTCA+GGG | + | chr5.3:12890736-12890755 | MS.gene68063:intron | 30.0% |
| !!! | ACTAGAGAGTTCTTATTTTC+CGG | - | chr5.3:12891768-12891787 | None:intergenic | 30.0% |
| !!! | TTGGTTTTTTGTTGTTTACG+AGG | - | chr5.3:12890063-12890082 | None:intergenic | 30.0% |
| AAAACCTTACCAAGAACCAA+AGG | - | chr5.3:12890328-12890347 | None:intergenic | 35.0% | |
| AACTACGAAGAACACATCAT+CGG | + | chr5.3:12889974-12889993 | MS.gene68063:CDS | 35.0% | |
| AATTACCGCTTTGTAAAGAG+CGG | - | chr5.3:12892180-12892199 | None:intergenic | 35.0% | |
| ACAAACATTCATCATGACAC+TGG | + | chr5.3:12893321-12893340 | MS.gene68063:intron | 35.0% | |
| ACACGGAAGATTATAATGTG+TGG | + | chr5.3:12892101-12892120 | MS.gene68063:intron | 35.0% | |
| ACCTTGTGTGTTAGATAATG+TGG | + | chr5.3:12893085-12893104 | MS.gene68063:intron | 35.0% | |
| AGCAGTAAGCAGATTAATAC+TGG | + | chr5.3:12894102-12894121 | MS.gene68063:intron | 35.0% | |
| ATGATGAAGAAGAAGAAGGT+GGG | + | chr5.3:12890362-12890381 | MS.gene68063:CDS | 35.0% | |
| ATTGACTAATCAACGTGTCA+CGG | - | chr5.3:12893862-12893881 | None:intergenic | 35.0% | |
| CAAGCACATGTAGTTATGTT+TGG | + | chr5.3:12890902-12890921 | MS.gene68063:intron | 35.0% | |
| CACATACATGTAGTTACCTT+TGG | + | chr5.3:12890783-12890802 | MS.gene68063:intron | 35.0% | |
| CCTTGTGTGTTAGATAATGT+GGG | + | chr5.3:12893086-12893105 | MS.gene68063:intron | 35.0% | |
| CTCACATTATCTTGCACAAA+CGG | - | chr5.3:12892251-12892270 | None:intergenic | 35.0% | |
| GAAGATGATGAAGAAGAAGA+AGG | + | chr5.3:12890358-12890377 | MS.gene68063:CDS | 35.0% | |
| GCTTCATAGATTATTGTGTC+AGG | + | chr5.3:12890711-12890730 | MS.gene68063:intron | 35.0% | |
| GGTAAATTATCAGTTGTCAC+TGG | + | chr5.3:12893412-12893431 | MS.gene68063:intron | 35.0% | |
| GTAGTGAAAATCAACTTCCT+TGG | + | chr5.3:12891032-12891051 | MS.gene68063:intron | 35.0% | |
| GTCAGGTGTATGAAATGTAT+TGG | + | chr5.3:12890728-12890747 | MS.gene68063:intron | 35.0% | |
| GTTGTATATTGCCATCCATT+AGG | - | chr5.3:12891370-12891389 | None:intergenic | 35.0% | |
| TAGAATATCAGGATACCAAC+AGG | - | chr5.3:12892697-12892716 | None:intergenic | 35.0% | |
| TCAGGGTGTATGAAATGTAT+TGG | + | chr5.3:12890753-12890772 | MS.gene68063:intron | 35.0% | |
| TGAAAAGATTGAAACTTGCG+AGG | - | chr5.3:12889896-12889915 | None:intergenic | 35.0% | |
| TGGAAGAAGAAGAAGAAGAA+GGG | - | chr5.3:12889871-12889890 | None:intergenic | 35.0% | |
| TTAAATGTAACCTCGTGTGT+TGG | + | chr5.3:12893515-12893534 | MS.gene68063:intron | 35.0% | |
| TTCAGTAAGTATTCCATGTC+TGG | + | chr5.3:12891688-12891707 | MS.gene68063:intron | 35.0% | |
| TTGTACAGCATAGTGAATCA+AGG | - | chr5.3:12892764-12892783 | None:intergenic | 35.0% | |
| TTGTCGGAAGTTGGAAAAAT+GGG | - | chr5.3:12890037-12890056 | None:intergenic | 35.0% | |
| ! | AATCACCTAACTGGTTCTTA+AGG | - | chr5.3:12893603-12893622 | None:intergenic | 35.0% |
| ! | AGAGAATTTTGTGGAAGTTG+CGG | - | chr5.3:12889931-12889950 | None:intergenic | 35.0% |
| ! | AGTACTCTTGTTGTACAATG+TGG | + | chr5.3:12892807-12892826 | MS.gene68063:CDS | 35.0% |
| ! | CACCAATTTAAGAGCCATTT+TGG | - | chr5.3:12891327-12891346 | None:intergenic | 35.0% |
| ! | CTGTTTTCATAAGCTATCCT+GGG | + | chr5.3:12892506-12892525 | MS.gene68063:intron | 35.0% |
| ! | GTATGAAATGTATTGGTGTC+AGG | + | chr5.3:12890735-12890754 | MS.gene68063:intron | 35.0% |
| ! | GTGATGAAGAGAGAATTTTG+TGG | - | chr5.3:12889940-12889959 | None:intergenic | 35.0% |
| ! | GTTTTTCTTCAACAACCGAT+AGG | - | chr5.3:12893706-12893725 | None:intergenic | 35.0% |
| ! | TAATAGAAGTGTAGGGGAAA+AGG | + | chr5.3:12891884-12891903 | MS.gene68063:intron | 35.0% |
| ! | TTCTACCTCTTACTCTTTTG+TGG | + | chr5.3:12892879-12892898 | MS.gene68063:intron | 35.0% |
| ! | TTTGATTTATGGGAGCTTGT+TGG | + | chr5.3:12891102-12891121 | MS.gene68063:intron | 35.0% |
| !! | AGATGCTTTTAACTGGTCAT+TGG | + | chr5.3:12893117-12893136 | MS.gene68063:intron | 35.0% |
| !! | GATGCTTTTAACTGGTCATT+GGG | + | chr5.3:12893118-12893137 | MS.gene68063:intron | 35.0% |
| !! | TGACATTTTGACCAGAGTAA+AGG | - | chr5.3:12894206-12894225 | None:intergenic | 35.0% |
| !! | TTGCTTTGTTGTTTATGTGC+TGG | + | chr5.3:12892722-12892741 | MS.gene68063:intron | 35.0% |
| !!! | AGTTTTAGATTGAACGTGTC+AGG | + | chr5.3:12890586-12890605 | MS.gene68063:intron | 35.0% |
| AACCTTTGGTACCTAATGGA+TGG | + | chr5.3:12891356-12891375 | MS.gene68063:intron | 40.0% | |
| AATGGGATGCCGCAATTATA+CGG | - | chr5.3:12893166-12893185 | None:intergenic | 40.0% | |
| AGACTGTTCAGAAGAGCTTA+TGG | - | chr5.3:12892584-12892603 | None:intergenic | 40.0% | |
| AGCAACACAGACACATATAC+CGG | - | chr5.3:12890950-12890969 | None:intergenic | 40.0% | |
| AGGAATCATTAGACTTTGCC+AGG | + | chr5.3:12893741-12893760 | MS.gene68063:intron | 40.0% | |
| AGGATACCAACAGGTAACTA+AGG | - | chr5.3:12892688-12892707 | None:intergenic | 40.0% | |
| ATGTCCATACATCATCACCA+AGG | - | chr5.3:12891052-12891071 | None:intergenic | 40.0% | |
| ATTTACCTACGAAGCAACTC+AGG | + | chr5.3:12893436-12893455 | MS.gene68063:intron | 40.0% | |
| CAACAGTCTCTTGAGAAACT+CGG | + | chr5.3:12892220-12892239 | MS.gene68063:CDS | 40.0% | |
| CAATGACACGTAGATACCAA+AGG | - | chr5.3:12890802-12890821 | None:intergenic | 40.0% | |
| CCCACATTATCTAACACACA+AGG | - | chr5.3:12893089-12893108 | None:intergenic | 40.0% | |
| CTATGTGTCAGTGTCATATC+CGG | + | chr5.3:12890928-12890947 | MS.gene68063:intron | 40.0% | |
| CTCTTCCTTAAGAACCAGTT+AGG | + | chr5.3:12893595-12893614 | MS.gene68063:intron | 40.0% | |
| CTTCGTAGTTGTTGTCATGT+TGG | - | chr5.3:12889964-12889983 | None:intergenic | 40.0% | |
| GAAAGACTTCCCTGGTTAAT+GGG | - | chr5.3:12893668-12893687 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGAAGGGAA+TGG | - | chr5.3:12889866-12889885 | None:intergenic | 40.0% | |
| GATGATGAAGAAGAAGAAGG+TGG | + | chr5.3:12890361-12890380 | MS.gene68063:CDS | 40.0% | |
| GCTACATAAACAACCTAGGA+TGG | + | chr5.3:12891426-12891445 | MS.gene68063:intron | 40.0% | |
| GCTCTTTACAAAGCGGTAAT+TGG | + | chr5.3:12892179-12892198 | MS.gene68063:CDS | 40.0% | |
| GTCTGAACAGCAAGATGTAA+TGG | - | chr5.3:12892956-12892975 | None:intergenic | 40.0% | |
| GTGGAAGAAGAAGAAGAAGA+AGG | - | chr5.3:12889872-12889891 | None:intergenic | 40.0% | |
| GTTGTCGGAAGTTGGAAAAA+TGG | - | chr5.3:12890038-12890057 | None:intergenic | 40.0% | |
| GTTGTTTACGAGGTTGTTGT+CGG | - | chr5.3:12890053-12890072 | None:intergenic | 40.0% | |
| GTTGTTTATGTGCTGGAAAC+AGG | + | chr5.3:12892729-12892748 | MS.gene68063:intron | 40.0% | |
| TACAGCATAGTGAATCAAGG+TGG | - | chr5.3:12892761-12892780 | None:intergenic | 40.0% | |
| TCACAACCTTTGGTACCTAA+TGG | + | chr5.3:12891352-12891371 | MS.gene68063:intron | 40.0% | |
| TGTCGGAAGTTGGAAAAATG+GGG | - | chr5.3:12890036-12890055 | None:intergenic | 40.0% | |
| TGTGGTGTTCCGTATAATTG+CGG | + | chr5.3:12893154-12893173 | MS.gene68063:intron | 40.0% | |
| TTACTACGCAACATCAACGA+TGG | - | chr5.3:12891826-12891845 | None:intergenic | 40.0% | |
| TTATGTGCTGGAAACAGGAT+GGG | + | chr5.3:12892734-12892753 | MS.gene68063:intron | 40.0% | |
| TTCAAATCCATATCCCTCGA+AGG | - | chr5.3:12890262-12890281 | None:intergenic | 40.0% | |
| TTGCAAACAATGAGAAGCAG+CGG | - | chr5.3:12891538-12891557 | None:intergenic | 40.0% | |
| TTTATGTGCTGGAAACAGGA+TGG | + | chr5.3:12892733-12892752 | MS.gene68063:intron | 40.0% | |
| TTTGACCAGAGTAAAGGCAA+AGG | - | chr5.3:12894200-12894219 | None:intergenic | 40.0% | |
| TTTGACCGCTCTTTACAAAG+CGG | + | chr5.3:12892172-12892191 | MS.gene68063:CDS | 40.0% | |
| ! | GTGAAGCTTCTGCTGATTAA+AGG | + | chr5.3:12892992-12893011 | MS.gene68063:CDS | 40.0% |
| ! | TCTCAAGAGACTGTTGGTTA+TGG | - | chr5.3:12892216-12892235 | None:intergenic | 40.0% |
| ! | TTGTGGATTACGAACAAGTG+TGG | - | chr5.3:12889822-12889841 | None:intergenic | 40.0% |
| ! | TTTTGTGTATAGGTCGTCCT+AGG | + | chr5.3:12891603-12891622 | MS.gene68063:intron | 40.0% |
| !! | AATAGAAGCGGGCTGAATAT+AGG | + | chr5.3:12893371-12893390 | MS.gene68063:intron | 40.0% |
| !! | AATCCTAGATGGGCTGTTTA+TGG | + | chr5.3:12890412-12890431 | MS.gene68063:CDS | 40.0% |
| !! | ACTTCCTTGGTGATGATGTA+TGG | + | chr5.3:12891045-12891064 | MS.gene68063:intron | 40.0% |
| !! | ATCCTAGATGGGCTGTTTAT+GGG | + | chr5.3:12890413-12890432 | MS.gene68063:CDS | 40.0% |
| !! | GCTGTTTTCATAAGCTATCC+TGG | + | chr5.3:12892505-12892524 | MS.gene68063:intron | 40.0% |
| !! | GTCTTTTGTTTGTCTCAGGA+TGG | + | chr5.3:12894159-12894178 | MS.gene68063:intron | 40.0% |
| !! | TCATTTGCTGTGTCTTAGGA+TGG | + | chr5.3:12892923-12892942 | MS.gene68063:intron | 40.0% |
| !!! | ACTGGTCATTGGGTTTTTTG+TGG | + | chr5.3:12893128-12893147 | MS.gene68063:intron | 40.0% |
| !!! | CTGGTCATTGGGTTTTTTGT+GGG | + | chr5.3:12893129-12893148 | MS.gene68063:intron | 40.0% |
| !!! | TTGGGTTTTTTGTGGGTTTG+TGG | + | chr5.3:12893136-12893155 | MS.gene68063:intron | 40.0% |
| AAGAGATTCGCCCATTAACC+AGG | + | chr5.3:12893655-12893674 | MS.gene68063:intron | 45.0% | |
| ACAATGATGAATTCCCGGTG+AGG | - | chr5.3:12892370-12892389 | None:intergenic | 45.0% | |
| AGAGATTCGCCCATTAACCA+GGG | + | chr5.3:12893656-12893675 | MS.gene68063:intron | 45.0% | |
| AGATTGAAACTTGCGAGGTG+TGG | - | chr5.3:12889891-12889910 | None:intergenic | 45.0% | |
| AGTGCCTAGGAATCCTAGAT+GGG | + | chr5.3:12890402-12890421 | MS.gene68063:CDS | 45.0% | |
| CAACATAACACCAACACACG+AGG | - | chr5.3:12893528-12893547 | None:intergenic | 45.0% | |
| CAAGACGCACAAAAAACTCG+CGG | - | chr5.3:12893209-12893228 | None:intergenic | 45.0% | |
| CAATGATGAATTCCCGGTGA+GGG | - | chr5.3:12892369-12892388 | None:intergenic | 45.0% | |
| CAGTGATTGTTCACCAGACA+TGG | - | chr5.3:12891704-12891723 | None:intergenic | 45.0% | |
| CGAGTTTCTCAAGAGACTGT+TGG | - | chr5.3:12892222-12892241 | None:intergenic | 45.0% | |
| CTACGTGTCAGTGTCGTATA+TGG | + | chr5.3:12890663-12890682 | MS.gene68063:intron | 45.0% | |
| GAAGTAGCAACTGACAAGTC+TGG | - | chr5.3:12891671-12891690 | None:intergenic | 45.0% | |
| GACTCTGCTGCTATGAAAAC+TGG | + | chr5.3:12890481-12890500 | MS.gene68063:CDS | 45.0% | |
| GCATATTTCCATAAGCTCCC+AGG | - | chr5.3:12892526-12892545 | None:intergenic | 45.0% | |
| GGAAAGACTTCCCTGGTTAA+TGG | - | chr5.3:12893669-12893688 | None:intergenic | 45.0% | |
| GTCGGCTACATAAACAACCT+AGG | + | chr5.3:12891422-12891441 | MS.gene68063:intron | 45.0% | |
| GTGGTCCACAAAAGAGTAAG+AGG | - | chr5.3:12892887-12892906 | None:intergenic | 45.0% | |
| TAAGCTATCCTGGGAGCTTA+TGG | + | chr5.3:12892515-12892534 | MS.gene68063:intron | 45.0% | |
| TAGTGCCTAGGAATCCTAGA+TGG | + | chr5.3:12890401-12890420 | MS.gene68063:CDS | 45.0% | |
| TATGTGCTGGAAACAGGATG+GGG | + | chr5.3:12892735-12892754 | MS.gene68063:intron | 45.0% | |
| TCACTAAAGAAGCAAGTGCC+TGG | - | chr5.3:12893762-12893781 | None:intergenic | 45.0% | |
| TCGTCCTAGGTTGTTTACCA+GGG | + | chr5.3:12891616-12891635 | MS.gene68063:CDS | 45.0% | |
| TCTGCTGCTATGAAAACTGG+AGG | + | chr5.3:12890484-12890503 | MS.gene68063:CDS | 45.0% | |
| TGACTTAGGAAAGACTTCCC+TGG | - | chr5.3:12893676-12893695 | None:intergenic | 45.0% | |
| TGCCATCCATTAGGTACCAA+AGG | - | chr5.3:12891361-12891380 | None:intergenic | 45.0% | |
| TGTTTATGGGAGAGGTTTCG+AGG | + | chr5.3:12890426-12890445 | MS.gene68063:CDS | 45.0% | |
| TTCTTCTTATCCCCGTCTGT+CGG | - | chr5.3:12894275-12894294 | None:intergenic | 45.0% | |
| ! | AAAGAGGGTTGATTCCTTCG+AGG | + | chr5.3:12890245-12890264 | MS.gene68063:CDS | 45.0% |
| ! | AAGAGGGTTGATTCCTTCGA+GGG | + | chr5.3:12890246-12890265 | MS.gene68063:CDS | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5.3:12891400-12891419 | MS.gene68063:intron | 45.0% |
| ! | ATGGAGAGAAGAAGAGTGTG+TGG | - | chr5.3:12889847-12889866 | None:intergenic | 45.0% |
| ! | ATTGGCTCAGTTGAAGCCTT+TGG | + | chr5.3:12890309-12890328 | MS.gene68063:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5.3:12891399-12891418 | MS.gene68063:intron | 45.0% |
| ! | CTACGTGTCATTGTCACATC+TGG | + | chr5.3:12890809-12890828 | MS.gene68063:intron | 45.0% |
| ! | CTTGCAGCAAAAGTGTGCAA+AGG | - | chr5.3:12891997-12892016 | None:intergenic | 45.0% |
| ! | GTTGATTCCTTCGAGGGATA+TGG | + | chr5.3:12890252-12890271 | MS.gene68063:CDS | 45.0% |
| ! | TGGAGAGAAGAAGAGTGTGT+GGG | - | chr5.3:12889846-12889865 | None:intergenic | 45.0% |
| ! | TTGCACACTTTTGCTGCAAG+CGG | + | chr5.3:12891997-12892016 | MS.gene68063:CDS | 45.0% |
| !! | AGGTGCTTTTAATGGGTCGT+TGG | + | chr5.3:12893391-12893410 | MS.gene68063:intron | 45.0% |
| !! | CAGTTGAAGCCTTTGGTTCT+TGG | + | chr5.3:12890316-12890335 | MS.gene68063:CDS | 45.0% |
| !! | CTCGTGTGTTGGTGTTATGT+TGG | + | chr5.3:12893526-12893545 | MS.gene68063:intron | 45.0% |
| !! | GAAGCCTTTGGTTCTTGGTA+AGG | + | chr5.3:12890321-12890340 | MS.gene68063:CDS | 45.0% |
| !! | TATTGTTTAGGGTGCCGTTC+TGG | + | chr5.3:12890853-12890872 | MS.gene68063:intron | 45.0% |
| !! | TGGTGCTACTTCACAACCTT+TGG | + | chr5.3:12891342-12891361 | MS.gene68063:intron | 45.0% |
| ACGAGGTTGTTGTCGGAAGT+TGG | - | chr5.3:12890046-12890065 | None:intergenic | 50.0% | |
| ATACGTGTCAGCCACCAGAA+CGG | - | chr5.3:12890870-12890889 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr5.3:12891401-12891420 | None:intergenic | 50.0% | |
| CTCCCATAAACAGCCCATCT+AGG | - | chr5.3:12890418-12890437 | None:intergenic | 50.0% | |
| CTCGACCTTTGCCTTTACTC+TGG | + | chr5.3:12894192-12894211 | MS.gene68063:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5.3:12891404-12891423 | MS.gene68063:intron | 50.0% | |
| GAATGCCTGAGTTGCTTCGT+AGG | - | chr5.3:12893444-12893463 | None:intergenic | 50.0% | |
| GACTGTCTTGTCTTCGAGGA+AGG | + | chr5.3:12889998-12890017 | MS.gene68063:CDS | 50.0% | |
| GAGTAAAGGCAAAGGTCGAG+TGG | - | chr5.3:12894192-12894211 | None:intergenic | 50.0% | |
| GCCTTATCACTTCTCCTGCA+AGG | - | chr5.3:12893896-12893915 | None:intergenic | 50.0% | |
| GCCTTGCAGGAGAAGTGATA+AGG | + | chr5.3:12893892-12893911 | MS.gene68063:intron | 50.0% | |
| GTCGTCCTAGGTTGTTTACC+AGG | + | chr5.3:12891615-12891634 | MS.gene68063:CDS | 50.0% | |
| GTTGTTTACCAGGGAGGAGA+GGG | + | chr5.3:12891625-12891644 | MS.gene68063:CDS | 50.0% | |
| TCCTAGGTTGTTTACCAGGG+AGG | + | chr5.3:12891619-12891638 | MS.gene68063:CDS | 50.0% | |
| TCCTCCCTGGTAAACAACCT+AGG | - | chr5.3:12891623-12891642 | None:intergenic | 50.0% | |
| TCTTCTTATCCCCGTCTGTC+GGG | - | chr5.3:12894274-12894293 | None:intergenic | 50.0% | |
| TTATAGACGCTCCCGACAGA+CGG | + | chr5.3:12894260-12894279 | MS.gene68063:CDS | 50.0% | |
| TTGCTGTGTCTTAGGATGGC+TGG | + | chr5.3:12892927-12892946 | MS.gene68063:intron | 50.0% | |
| ! | AAGAAGAGTGTGTGGGGTTG+TGG | - | chr5.3:12889839-12889858 | None:intergenic | 50.0% |
| ! | ACAGCCCATCTAGGATTCCT+AGG | - | chr5.3:12890409-12890428 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5.3:12891398-12891417 | MS.gene68063:intron | 50.0% |
| ! | GGAGAGAAGAAGAGTGTGTG+GGG | - | chr5.3:12889845-12889864 | None:intergenic | 50.0% |
| !! | AAGGTGGGTTGAGTGATGAG+AGG | + | chr5.3:12890377-12890396 | MS.gene68063:CDS | 50.0% |
| !! | AGATGGGCTGTTTATGGGAG+AGG | + | chr5.3:12890418-12890437 | MS.gene68063:CDS | 50.0% |
| !! | AGGTGGGTTGAGTGATGAGA+GGG | + | chr5.3:12890378-12890397 | MS.gene68063:CDS | 50.0% |
| AATCTCAGTCCTCGCCTTGC+AGG | + | chr5.3:12893879-12893898 | MS.gene68063:intron | 55.0% | |
| ATCACTTCTCCTGCAAGGCG+AGG | - | chr5.3:12893891-12893910 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr5.3:12891413-12891432 | None:intergenic | 55.0% | |
| CAACAAATCCCTCTCCTCCC+TGG | - | chr5.3:12891636-12891655 | None:intergenic | 55.0% | |
| CAGGTGCGCTTGACACGTAA+TGG | + | chr5.3:12890605-12890624 | MS.gene68063:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr5.3:12891406-12891425 | None:intergenic | 55.0% | |
| CGGAGACTGTCTTGTCTTCG+AGG | + | chr5.3:12889994-12890013 | MS.gene68063:CDS | 55.0% | |
| GGTTGTTTACCAGGGAGGAG+AGG | + | chr5.3:12891624-12891643 | MS.gene68063:CDS | 55.0% | |
| GTGATGAGAGGGTAGTGCCT+AGG | + | chr5.3:12890389-12890408 | MS.gene68063:CDS | 55.0% | |
| TATAGACGCTCCCGACAGAC+GGG | + | chr5.3:12894261-12894280 | MS.gene68063:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5.3:12891412-12891431 | None:intergenic | 55.0% | |
| !! | GTCTGTCGGGAGCGTCTATA+AGG | - | chr5.3:12894261-12894280 | None:intergenic | 55.0% |
| !! | TGTTTAGGGTGCCGTTCTGG+TGG | + | chr5.3:12890856-12890875 | MS.gene68063:intron | 55.0% |
| ATAGACGCTCCCGACAGACG+GGG | + | chr5.3:12894262-12894281 | MS.gene68063:CDS | 60.0% | |
| GATGAATTCCCGGTGAGGGC+AGG | - | chr5.3:12892365-12892384 | None:intergenic | 60.0% | |
| CGTGCTCTTCCTGCCCTCAC+CGG | + | chr5.3:12892353-12892372 | MS.gene68063:intron | 65.0% | |
| GTGCTCTTCCTGCCCTCACC+GGG | + | chr5.3:12892354-12892373 | MS.gene68063:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 12889806 | 12894299 | 12889806 | ID=MS.gene68063 |
| chr5.3 | mRNA | 12889806 | 12894299 | 12889806 | ID=MS.gene68063.t1;Parent=MS.gene68063 |
| chr5.3 | exon | 12889806 | 12890505 | 12889806 | ID=MS.gene68063.t1.exon1;Parent=MS.gene68063.t1 |
| chr5.3 | CDS | 12889806 | 12890505 | 12889806 | ID=cds.MS.gene68063.t1;Parent=MS.gene68063.t1 |
| chr5.3 | exon | 12891615 | 12891691 | 12891615 | ID=MS.gene68063.t1.exon2;Parent=MS.gene68063.t1 |
| chr5.3 | CDS | 12891615 | 12891691 | 12891615 | ID=cds.MS.gene68063.t1;Parent=MS.gene68063.t1 |
| chr5.3 | exon | 12891982 | 12892080 | 12891982 | ID=MS.gene68063.t1.exon3;Parent=MS.gene68063.t1 |
| chr5.3 | CDS | 12891982 | 12892080 | 12891982 | ID=cds.MS.gene68063.t1;Parent=MS.gene68063.t1 |
| chr5.3 | exon | 12892167 | 12892265 | 12892167 | ID=MS.gene68063.t1.exon4;Parent=MS.gene68063.t1 |
| chr5.3 | CDS | 12892167 | 12892265 | 12892167 | ID=cds.MS.gene68063.t1;Parent=MS.gene68063.t1 |
| chr5.3 | exon | 12892751 | 12892849 | 12892751 | ID=MS.gene68063.t1.exon5;Parent=MS.gene68063.t1 |
| chr5.3 | CDS | 12892751 | 12892849 | 12892751 | ID=cds.MS.gene68063.t1;Parent=MS.gene68063.t1 |
| chr5.3 | exon | 12892941 | 12893039 | 12892941 | ID=MS.gene68063.t1.exon6;Parent=MS.gene68063.t1 |
| chr5.3 | CDS | 12892941 | 12893039 | 12892941 | ID=cds.MS.gene68063.t1;Parent=MS.gene68063.t1 |
| chr5.3 | exon | 12894177 | 12894299 | 12894177 | ID=MS.gene68063.t1.exon7;Parent=MS.gene68063.t1 |
| chr5.3 | CDS | 12894177 | 12894299 | 12894177 | ID=cds.MS.gene68063.t1;Parent=MS.gene68063.t1 |
| Gene Sequence |
| Protein sequence |
