Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73643.t1 | XP_013455749.1 | 84.5 | 375 | 51 | 1 | 2 | 369 | 3 | 377 | 1.40E-96 | 363.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73643.t1 | Q9Y3A4 | 35.8 | 148 | 85 | 4 | 225 | 369 | 140 | 280 | 4.8e-13 | 77.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73643.t1 | A0A072UV85 | 84.5 | 375 | 51 | 1 | 2 | 369 | 3 | 377 | 1.0e-96 | 363.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene73643 | 0.805223 | 1.48E-49 | -1.69E-46 |
| MS.gene049756 | MS.gene73643 | 0.828074 | 1.10E-54 | -1.69E-46 |
| MS.gene04984 | MS.gene73643 | 0.842912 | 1.94E-58 | -1.69E-46 |
| MS.gene050114 | MS.gene73643 | 0.837396 | 5.33E-57 | -1.69E-46 |
| MS.gene050317 | MS.gene73643 | 0.844312 | 8.17E-59 | -1.69E-46 |
| MS.gene050469 | MS.gene73643 | 0.806995 | 6.27E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene73643 | 0.80749 | 4.93E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene73643 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene73643 | 0.803606 | 3.22E-49 | -1.69E-46 |
| MS.gene051245 | MS.gene73643 | 0.82546 | 4.63E-54 | -1.69E-46 |
| MS.gene051746 | MS.gene73643 | 0.819664 | 1.03E-52 | -1.69E-46 |
| MS.gene051748 | MS.gene73643 | 0.815533 | 8.81E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene73643 | 0.826143 | 3.19E-54 | -1.69E-46 |
| MS.gene05188 | MS.gene73643 | 0.824912 | 6.24E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene73643 | 0.802216 | 6.23E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene73643 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene73643 | 0.84645 | 2.16E-59 | -1.69E-46 |
| MS.gene052856 | MS.gene73643 | 0.815579 | 8.60E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene73643 | 0.818533 | 1.87E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene73643 | 0.800349 | 1.50E-48 | -1.69E-46 |
| MS.gene053381 | MS.gene73643 | 0.877316 | 6.93E-69 | -1.69E-46 |
| MS.gene054823 | MS.gene73643 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene73643 | 0.818014 | 2.45E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene73643 | 0.804113 | 2.52E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene73643 | 0.808759 | 2.65E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene73643 | 0.809889 | 1.51E-50 | -1.69E-46 |
| MS.gene056580 | MS.gene73643 | 0.800474 | 1.42E-48 | -1.69E-46 |
| MS.gene056787 | MS.gene73643 | 0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene73643 | 0.803408 | 3.54E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene73643 | 0.809276 | 2.05E-50 | -1.69E-46 |
| MS.gene057140 | MS.gene73643 | 0.807361 | 5.25E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene73643 | 0.831639 | 1.49E-55 | -1.69E-46 |
| MS.gene058084 | MS.gene73643 | 0.819761 | 9.80E-53 | -1.69E-46 |
| MS.gene058238 | MS.gene73643 | 0.806272 | 8.91E-50 | -1.69E-46 |
| MS.gene058646 | MS.gene73643 | 0.829072 | 6.32E-55 | -1.69E-46 |
| MS.gene058654 | MS.gene73643 | 0.844654 | 6.61E-59 | -1.69E-46 |
| MS.gene058906 | MS.gene73643 | 0.832881 | 7.34E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene73643 | 0.803864 | 2.84E-49 | -1.69E-46 |
| MS.gene05961 | MS.gene73643 | 0.818785 | 1.64E-52 | -1.69E-46 |
| MS.gene06001 | MS.gene73643 | 0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene06010 | MS.gene73643 | 0.845719 | 3.41E-59 | -1.69E-46 |
| MS.gene06011 | MS.gene73643 | 0.850312 | 1.84E-60 | -1.69E-46 |
| MS.gene060586 | MS.gene73643 | 0.83143 | 1.68E-55 | -1.69E-46 |
| MS.gene060702 | MS.gene73643 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene73643 | 0.808652 | 2.79E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene73643 | 0.837673 | 4.53E-57 | -1.69E-46 |
| MS.gene060870 | MS.gene73643 | 0.824695 | 7.02E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73643.t1 | MTR_4g051625 | 90.400 | 375 | 29 | 1 | 2 | 369 | 3 | 377 | 0.0 | 647 |
| MS.gene73643.t1 | MTR_4g051625 | 78.533 | 368 | 41 | 3 | 2 | 369 | 3 | 332 | 0.0 | 539 |
| MS.gene73643.t1 | MTR_8g085800 | 76.011 | 371 | 49 | 5 | 1 | 369 | 2 | 334 | 0.0 | 531 |
| MS.gene73643.t1 | MTR_1g090650 | 82.803 | 157 | 27 | 0 | 213 | 369 | 32 | 188 | 8.77e-92 | 273 |
| MS.gene73643.t1 | MTR_8g085830 | 63.636 | 99 | 9 | 2 | 271 | 369 | 2 | 73 | 4.49e-32 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73643.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 165 | 313 | 6.20e-71 | 224 |
| MS.gene73643.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 158 | 306 | 6.65e-71 | 224 |
| MS.gene73643.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 177 | 325 | 4.36e-70 | 223 |
Find 63 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTATAATCTCCATTTC+AGG | 0.167824 | 4.1:-46629583 | None:intergenic |
| ATTAGAATCTCTGTGCTTCT+TGG | 0.245269 | 4.1:-46629851 | None:intergenic |
| GAAAGTAAGTAAGGGGAAAA+AGG | 0.255499 | 4.1:+46628747 | MS.gene73643:CDS |
| TCTAAATCAACTTCATCTTC+TGG | 0.321764 | 4.1:-46629676 | None:intergenic |
| TGTCCTTGTTCTTCCTTCTT+CGG | 0.356153 | 4.1:-46628885 | None:intergenic |
| GCAGCTTGTAAAGGGGAAAA+AGG | 0.361208 | 4.1:+46628846 | MS.gene73643:CDS |
| TCCTGAAATGGAGATTATAA+AGG | 0.363253 | 4.1:+46629582 | MS.gene73643:CDS |
| CGTTATGATGAAAGTAAGTA+AGG | 0.364022 | 4.1:+46628738 | None:intergenic |
| GACATTCATATTATTTCCTC+TGG | 0.367904 | 4.1:+46630059 | MS.gene73643:CDS |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4.1:+46629406 | MS.gene73643:CDS |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4.1:+46629688 | MS.gene73643:CDS |
| AGCTGCTCTAGAGAATAAAT+TGG | 0.384415 | 4.1:+46632356 | MS.gene73643:CDS |
| AATAGAATGCAGCTTGTAAA+GGG | 0.394152 | 4.1:+46628838 | MS.gene73643:CDS |
| AGTAGCAACATCATTTAATA+AGG | 0.401324 | 4.1:-46633137 | None:intergenic |
| AAGCTACTACTAGTCGAAAA+AGG | 0.402492 | 4.1:+46629617 | MS.gene73643:CDS |
| CCAACCCAGGTCTACTTTGA+TGG | 0.402517 | 4.1:-46630585 | None:intergenic |
| TGTTTCAGTGGATCCTGAAA+TGG | 0.428608 | 4.1:+46629570 | MS.gene73643:intron |
| AAAAGAGAAGCTCAGAGAAA+TGG | 0.446445 | 4.1:+46632426 | MS.gene73643:CDS |
| CCTGAAATGGAGATTATAAA+GGG | 0.465886 | 4.1:+46629583 | MS.gene73643:CDS |
| AGTTCTAAAATCACCAGAAA+AGG | 0.474585 | 4.1:+46630016 | MS.gene73643:CDS |
| AAGTGGGATTGCTGTGGGCT+CGG | 0.474663 | 4.1:+46632326 | MS.gene73643:CDS |
| AAAGGCAGAACAAAATCATC+AGG | 0.476614 | 4.1:+46630034 | MS.gene73643:CDS |
| GGAGATTATAAAGGGAAGAA+AGG | 0.484365 | 4.1:+46629591 | MS.gene73643:CDS |
| TAATAGAATGCAGCTTGTAA+AGG | 0.488478 | 4.1:+46628837 | MS.gene73643:CDS |
| GGAATTGCAGAGCAAATTTG+AGG | 0.494356 | 4.1:+46633067 | MS.gene73643:CDS |
| AGATAAGAAGAAAAGAAGAA+AGG | 0.498367 | 4.1:+46629992 | MS.gene73643:CDS |
| TCAAACTGCAGAGTGGATCA+TGG | 0.512454 | 4.1:+46630558 | MS.gene73643:intron |
| TGATCACGGGATGCAAGTTA+CGG | 0.516984 | 4.1:+46629294 | MS.gene73643:CDS |
| TGGTTGTTTCAGTTGATCAC+GGG | 0.517139 | 4.1:+46629281 | MS.gene73643:intron |
| CCATCAAAGTAGACCTGGGT+TGG | 0.520897 | 4.1:+46630585 | MS.gene73643:CDS |
| AAAACTACCGACTCTGAAAG+TGG | 0.527900 | 4.1:+46632309 | MS.gene73643:CDS |
| AATGATGTCAGATGGAATAG+TGG | 0.531547 | 4.1:+46629792 | MS.gene73643:intron |
| CTCTGAAAGTGGGATTGCTG+TGG | 0.532604 | 4.1:+46632320 | MS.gene73643:CDS |
| CGAGAAGAAGAAGAAAAGTA+AGG | 0.533573 | 4.1:+46628783 | MS.gene73643:CDS |
| TCAAAGTAGACCTGGGTTGG+AGG | 0.539427 | 4.1:+46630588 | MS.gene73643:CDS |
| AAAGAAGCCCTTGCTGCAGA+AGG | 0.540425 | 4.1:+46632249 | MS.gene73643:CDS |
| TTGGTTGTTTCAGTTGATCA+CGG | 0.550128 | 4.1:+46629280 | MS.gene73643:intron |
| GTTATGATGAAAGTAAGTAA+GGG | 0.558300 | 4.1:+46628739 | None:intergenic |
| GGAGATGATGACTGCTCACA+TGG | 0.561999 | 4.1:+46630080 | MS.gene73643:CDS |
| GAATACCATCAAAGTAGACC+TGG | 0.568338 | 4.1:+46630580 | MS.gene73643:CDS |
| TCTGAAAGTGGGATTGCTGT+GGG | 0.573818 | 4.1:+46632321 | MS.gene73643:CDS |
| AAGAAGCCCTTGCTGCAGAA+GGG | 0.579858 | 4.1:+46632250 | MS.gene73643:CDS |
| ACATAGTGATTCTAAAGAAG+AGG | 0.580245 | 4.1:+46629816 | MS.gene73643:CDS |
| AGAAGCCCTTGCTGCAGAAG+GGG | 0.584522 | 4.1:+46632251 | MS.gene73643:CDS |
| GTTGTTGTAGAAGAGCAAAA+TGG | 0.586388 | 4.1:+46628946 | MS.gene73643:CDS |
| GAAGAAGAAGAAAAGTAAGG+TGG | 0.599273 | 4.1:+46628786 | MS.gene73643:CDS |
| AAGTTATTACTATCCGAAGA+AGG | 0.599313 | 4.1:+46628872 | MS.gene73643:CDS |
| GACGGTGGTTCAACACCACA+AGG | 0.613486 | 4.1:+46632278 | MS.gene73643:CDS |
| AAACTACCGACTCTGAAAGT+GGG | 0.614607 | 4.1:+46632310 | MS.gene73643:CDS |
| CACGGGATGCAAGTTACGGA+GGG | 0.615938 | 4.1:+46629298 | MS.gene73643:CDS |
| TTATGATGAAAGTAAGTAAG+GGG | 0.616703 | 4.1:+46628740 | None:intergenic |
| AGCAATCCCACTTTCAGAGT+CGG | 0.619196 | 4.1:-46632316 | None:intergenic |
| TGGTTCAACACCACAAGGGT+AGG | 0.619462 | 4.1:+46632283 | MS.gene73643:CDS |
| GAAGCCCTTGCTGCAGAAGG+GGG | 0.628790 | 4.1:+46632252 | MS.gene73643:CDS |
| AAATGCTGAAGTTGAGACAG+TGG | 0.639592 | 4.1:+46628813 | MS.gene73643:CDS |
| TGCAGCAGTTGAGAGCTGCT+AGG | 0.640397 | 4.1:+46633105 | MS.gene73643:CDS |
| ATAGAATGCAGCTTGTAAAG+GGG | 0.647805 | 4.1:+46628839 | MS.gene73643:CDS |
| TCACGGGATGCAAGTTACGG+AGG | 0.659404 | 4.1:+46629297 | MS.gene73643:CDS |
| AATACCATCAAAGTAGACCT+GGG | 0.679517 | 4.1:+46630581 | MS.gene73643:CDS |
| TGAGCAGTCATCATCTCCAG+AGG | 0.681253 | 4.1:-46630075 | None:intergenic |
| TATCCGAAGAAGGAAGAACA+AGG | 0.684569 | 4.1:+46628882 | MS.gene73643:CDS |
| AGACTATTTAACTACATACG+AGG | 0.724184 | 4.1:+46630630 | MS.gene73643:CDS |
| ACGGTGGTTCAACACCACAA+GGG | 0.755501 | 4.1:+46632279 | MS.gene73643:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGTTTATGAAATATTA+GGG | + | chr4.1:46632692-46632711 | MS.gene73643:intron | 10.0% |
| !! | AAAAAGAAAAATAAAGAAGT+TGG | + | chr4.1:46632381-46632400 | MS.gene73643:CDS | 15.0% |
| !! | AAATCATAAACATGTTAATT+AGG | + | chr4.1:46632599-46632618 | MS.gene73643:intron | 15.0% |
| !! | AATCATAAACATGTTAATTA+GGG | + | chr4.1:46632600-46632619 | MS.gene73643:intron | 15.0% |
| !! | TGTATATTTATTGTTATACA+TGG | + | chr4.1:46630463-46630482 | MS.gene73643:intron | 15.0% |
| !!! | AACTTCTTTATTTTTCTTTT+TGG | - | chr4.1:46632382-46632401 | None:intergenic | 15.0% |
| !!! | CTTTTAGTTTATGAAATATT+AGG | + | chr4.1:46632691-46632710 | MS.gene73643:intron | 15.0% |
| !!! | GTTGGAAAATATTTTATTTA+GGG | + | chr4.1:46630845-46630864 | MS.gene73643:intron | 15.0% |
| !!! | TGTTGGAAAATATTTTATTT+AGG | + | chr4.1:46630844-46630863 | MS.gene73643:intron | 15.0% |
| !! | AAGAATAATGGTAAACAATA+TGG | - | chr4.1:46630393-46630412 | None:intergenic | 20.0% |
| !! | AATGAATCCTTTATACTATT+AGG | - | chr4.1:46632757-46632776 | None:intergenic | 20.0% |
| !! | ATCAAAATAAGGAACAAATA+TGG | - | chr4.1:46632185-46632204 | None:intergenic | 20.0% |
| !! | ATCATAAACATGTTAATTAG+GGG | + | chr4.1:46632601-46632620 | MS.gene73643:intron | 20.0% |
| !! | ATCATAGAAACAAAGATATT+AGG | - | chr4.1:46632807-46632826 | None:intergenic | 20.0% |
| !! | TATACATATACATACAGTAA+TGG | + | chr4.1:46630280-46630299 | MS.gene73643:intron | 20.0% |
| !! | TATTGTGAATAATAATTTCG+TGG | - | chr4.1:46629017-46629036 | None:intergenic | 20.0% |
| !! | TCAAAATAAGGAACAAATAT+GGG | - | chr4.1:46632184-46632203 | None:intergenic | 20.0% |
| !! | TCATAGAAACAAAGATATTA+GGG | - | chr4.1:46632806-46632825 | None:intergenic | 20.0% |
| !! | TTACCTAGGATATAAAAATA+TGG | - | chr4.1:46632478-46632497 | None:intergenic | 20.0% |
| !!! | AATTATATAGCTTTTGACTT+GGG | + | chr4.1:46630530-46630549 | MS.gene73643:intron | 20.0% |
| !!! | AATTTTAATTTAATGGCAGA+AGG | - | chr4.1:46632837-46632856 | None:intergenic | 20.0% |
| !!! | ATTTTAATTTAATGGCAGAA+GGG | - | chr4.1:46632836-46632855 | None:intergenic | 20.0% |
| !!! | CTTTTACAAGTTATTTTTCA+AGG | - | chr4.1:46630901-46630920 | None:intergenic | 20.0% |
| !!! | GAATTTTCTCTGAAATAAAT+CGG | + | chr4.1:46629546-46629565 | MS.gene73643:intron | 20.0% |
| !!! | TAATTATATAGCTTTTGACT+TGG | + | chr4.1:46630529-46630548 | MS.gene73643:intron | 20.0% |
| !!! | TGCGTAGAATTTTAATTTAA+TGG | - | chr4.1:46632844-46632863 | None:intergenic | 20.0% |
| !!! | TTCCATGCAAAATTATTTTT+TGG | + | chr4.1:46632205-46632224 | MS.gene73643:intron | 20.0% |
| ! | AAACAGAGAAAAATTCTATG+AGG | - | chr4.1:46629954-46629973 | None:intergenic | 25.0% |
| ! | AACCTTATACAACTATAACT+TGG | - | chr4.1:46630959-46630978 | None:intergenic | 25.0% |
| ! | AATTCTGCGAAGAAAAAAAA+AGG | - | chr4.1:46630123-46630142 | None:intergenic | 25.0% |
| ! | AGATAAGAAGAAAAGAAGAA+AGG | + | chr4.1:46629992-46630011 | MS.gene73643:CDS | 25.0% |
| ! | ATCCAAGTTATAGTTGTATA+AGG | + | chr4.1:46630954-46630973 | MS.gene73643:intron | 25.0% |
| ! | GAAAAATTCTATGAGGAAAA+TGG | - | chr4.1:46629947-46629966 | None:intergenic | 25.0% |
| ! | GAGAGTAATTGATAGAAATA+TGG | + | chr4.1:46631311-46631330 | MS.gene73643:intron | 25.0% |
| ! | TACATTGGAACAATTTACAA+TGG | + | chr4.1:46630250-46630269 | MS.gene73643:intron | 25.0% |
| ! | TATTCACAATATCTTGAAGT+CGG | + | chr4.1:46629026-46629045 | MS.gene73643:intron | 25.0% |
| ! | TCATAAACATGTTAATTAGG+GGG | + | chr4.1:46632602-46632621 | MS.gene73643:intron | 25.0% |
| ! | TCGCAGAATTACTTTATATT+TGG | + | chr4.1:46630133-46630152 | MS.gene73643:intron | 25.0% |
| ! | TCGCTGTATAATAAAATTCA+TGG | - | chr4.1:46630813-46630832 | None:intergenic | 25.0% |
| ! | TGAAACAACCAATTCATATA+GGG | - | chr4.1:46629272-46629291 | None:intergenic | 25.0% |
| ! | TTTGCATGGAAATCAAAATA+AGG | - | chr4.1:46632196-46632215 | None:intergenic | 25.0% |
| !! | AGAATTTTTCTCTGTTTTGT+AGG | + | chr4.1:46629957-46629976 | MS.gene73643:intron | 25.0% |
| !! | GACCAAAAAATAATTTTGCA+TGG | - | chr4.1:46632210-46632229 | None:intergenic | 25.0% |
| !! | TATTTCTCTGTATTTTCTCT+TGG | + | chr4.1:46631729-46631748 | MS.gene73643:intron | 25.0% |
| !! | TCGTGACATTTAGTATTTTT+CGG | + | chr4.1:46629159-46629178 | MS.gene73643:intron | 25.0% |
| !!! | AAAGTCATTTTTCATACATC+TGG | + | chr4.1:46630917-46630936 | MS.gene73643:intron | 25.0% |
| !!! | AAGTCATTTTTCATACATCT+GGG | + | chr4.1:46630918-46630937 | MS.gene73643:intron | 25.0% |
| !!! | AATGTGTTATGTTTTTGTAC+TGG | + | chr4.1:46629511-46629530 | MS.gene73643:intron | 25.0% |
| !!! | AATTATTTTTTGGTCAATGC+AGG | + | chr4.1:46632215-46632234 | MS.gene73643:intron | 25.0% |
| !!! | TGTCCTTGTTTTTCTTTTTT+CGG | - | chr4.1:46629348-46629367 | None:intergenic | 25.0% |
| !!! | TTGCCATATTTTTATATCCT+AGG | + | chr4.1:46632472-46632491 | MS.gene73643:intron | 25.0% |
| AAAGTAAGTAAGGGGAAAAA+GGG | + | chr4.1:46628748-46628767 | MS.gene73643:CDS | 30.0% | |
| AAATAGAAGAAGAACGTTTC+GGG | - | chr4.1:46631518-46631537 | None:intergenic | 30.0% | |
| AAATGGTGAGTTAATGATAG+TGG | + | chr4.1:46628963-46628982 | MS.gene73643:intron | 30.0% | |
| AACAAGGACAAAAATCTAGT+TGG | + | chr4.1:46629358-46629377 | MS.gene73643:CDS | 30.0% | |
| AACAGTAATGCATAATCATG+AGG | + | chr4.1:46631375-46631394 | MS.gene73643:intron | 30.0% | |
| AACTACATACGAGGAAAAAT+TGG | + | chr4.1:46630639-46630658 | MS.gene73643:CDS | 30.0% | |
| AAGCGAGAAATATCACAAAT+AGG | - | chr4.1:46632783-46632802 | None:intergenic | 30.0% | |
| AAGTTATTACTATCCGAAGA+AGG | + | chr4.1:46628872-46628891 | MS.gene73643:CDS | 30.0% | |
| AATAGAATGCAGCTTGTAAA+GGG | + | chr4.1:46628838-46628857 | MS.gene73643:CDS | 30.0% | |
| ACAGTAATGCATAATCATGA+GGG | + | chr4.1:46631376-46631395 | MS.gene73643:intron | 30.0% | |
| ACATTCCACAATGATAGATA+AGG | + | chr4.1:46631545-46631564 | MS.gene73643:intron | 30.0% | |
| AGACTATTTAACTACATACG+AGG | + | chr4.1:46630630-46630649 | MS.gene73643:CDS | 30.0% | |
| AGCGAGAAATATCACAAATA+GGG | - | chr4.1:46632782-46632801 | None:intergenic | 30.0% | |
| AGGGTTATCTGACTATAATT+AGG | - | chr4.1:46630765-46630784 | None:intergenic | 30.0% | |
| CAAATAGAAGAAGAACGTTT+CGG | - | chr4.1:46631519-46631538 | None:intergenic | 30.0% | |
| CAGCGAAATTAAATTGATGT+TGG | + | chr4.1:46630827-46630846 | MS.gene73643:intron | 30.0% | |
| CATAAACATGTTAATTAGGG+GGG | + | chr4.1:46632603-46632622 | MS.gene73643:intron | 30.0% | |
| CATTACTGTTCTGTAATCAA+GGG | - | chr4.1:46631365-46631384 | None:intergenic | 30.0% | |
| CCTGAAATGGAGATTATAAA+GGG | + | chr4.1:46629583-46629602 | MS.gene73643:CDS | 30.0% | |
| CTGAAACAACCAATTCATAT+AGG | - | chr4.1:46629273-46629292 | None:intergenic | 30.0% | |
| GAACATTTCCCTATATGAAT+TGG | + | chr4.1:46629261-46629280 | MS.gene73643:intron | 30.0% | |
| GACATTCATATTATTTCCTC+TGG | + | chr4.1:46630059-46630078 | MS.gene73643:CDS | 30.0% | |
| GAGTGAATTCATAGATAACT+TGG | + | chr4.1:46631796-46631815 | MS.gene73643:intron | 30.0% | |
| GTGAGATGAGAGATTATAAA+GGG | - | chr4.1:46632090-46632109 | None:intergenic | 30.0% | |
| TAAACAATATGGTCACTCTT+AGG | - | chr4.1:46630382-46630401 | None:intergenic | 30.0% | |
| TAAATTTAAACCAACGACGT+TGG | + | chr4.1:46632560-46632579 | MS.gene73643:intron | 30.0% | |
| TAATAGAATGCAGCTTGTAA+AGG | + | chr4.1:46628837-46628856 | MS.gene73643:CDS | 30.0% | |
| TATTAAAATGATATGCACGC+AGG | - | chr4.1:46631181-46631200 | None:intergenic | 30.0% | |
| TCATAGCTGTAAATTGAACA+TGG | - | chr4.1:46632156-46632175 | None:intergenic | 30.0% | |
| TCCTGAAATGGAGATTATAA+AGG | + | chr4.1:46629582-46629601 | MS.gene73643:CDS | 30.0% | |
| TCTAAATCAACTTCATCTTC+TGG | - | chr4.1:46629679-46629698 | None:intergenic | 30.0% | |
| TCTTAAAGCAAAACAGAAGT+CGG | + | chr4.1:46630687-46630706 | MS.gene73643:intron | 30.0% | |
| TGAGAAAGTTAGAAGAAACA+AGG | - | chr4.1:46631426-46631445 | None:intergenic | 30.0% | |
| TGCTAGACCTAATAGTATAA+AGG | + | chr4.1:46632747-46632766 | MS.gene73643:intron | 30.0% | |
| TGGTAATCATGTATCAAGAT+TGG | - | chr4.1:46631573-46631592 | None:intergenic | 30.0% | |
| TGTGAGATGAGAGATTATAA+AGG | - | chr4.1:46632091-46632110 | None:intergenic | 30.0% | |
| TTGTAATAAACTGCACTTTC+TGG | + | chr4.1:46629894-46629913 | MS.gene73643:intron | 30.0% | |
| ! | AAATAAATCGGTTGTTTCAG+TGG | + | chr4.1:46629558-46629577 | MS.gene73643:intron | 30.0% |
| ! | ACATAGTGATTCTAAAGAAG+AGG | + | chr4.1:46629816-46629835 | MS.gene73643:CDS | 30.0% |
| ! | AGAAACTCAAAAAGCACATA+AGG | - | chr4.1:46631212-46631231 | None:intergenic | 30.0% |
| ! | AGAAAGTGCAGTTTATTACA+AGG | - | chr4.1:46629895-46629914 | None:intergenic | 30.0% |
| ! | ATCTGTCATTTCAGTTACAA+TGG | - | chr4.1:46631858-46631877 | None:intergenic | 30.0% |
| ! | GATTTCTTTAGAGACATCAA+TGG | - | chr4.1:46631705-46631724 | None:intergenic | 30.0% |
| ! | GTTGATTTAGAAGAGCAAAA+TGG | + | chr4.1:46629406-46629425 | MS.gene73643:CDS | 30.0% |
| ! | TTTTTCTCTGTTTTGTAGGT+AGG | + | chr4.1:46629961-46629980 | MS.gene73643:intron | 30.0% |
| !! | AGTTCTAAAATCACCAGAAA+AGG | + | chr4.1:46630016-46630035 | MS.gene73643:CDS | 30.0% |
| !! | GGTTTTGATGAGTAAGAATA+AGG | + | chr4.1:46631332-46631351 | MS.gene73643:intron | 30.0% |
| !! | TTAAATTTGGTGTTAGGATG+TGG | + | chr4.1:46631066-46631085 | MS.gene73643:intron | 30.0% |
| !!! | ATGTGCTTTTTGAGTTTCTT+TGG | + | chr4.1:46631213-46631232 | MS.gene73643:intron | 30.0% |
| !!! | GGTTAGTTTTACATGTACAT+TGG | + | chr4.1:46630235-46630254 | MS.gene73643:intron | 30.0% |
| AAAAGAGAAGCTCAGAGAAA+TGG | + | chr4.1:46632426-46632445 | MS.gene73643:CDS | 35.0% | |
| AAAGGCAGAACAAAATCATC+AGG | + | chr4.1:46630034-46630053 | MS.gene73643:CDS | 35.0% | |
| AACAAGGACAAAAATCTAGC+TGG | + | chr4.1:46628898-46628917 | MS.gene73643:CDS | 35.0% | |
| AACACTAGCAGTAATGTTTC+TGG | + | chr4.1:46632868-46632887 | MS.gene73643:intron | 35.0% | |
| AAGCTACTACTAGTCGAAAA+AGG | + | chr4.1:46629617-46629636 | MS.gene73643:CDS | 35.0% | |
| AATACCATCAAAGTAGACCT+GGG | + | chr4.1:46630581-46630600 | MS.gene73643:CDS | 35.0% | |
| AATGATGTCAGATGGAATAG+TGG | + | chr4.1:46629792-46629811 | MS.gene73643:intron | 35.0% | |
| ACAAATATGCACAAAGCACA+CGG | - | chr4.1:46630446-46630465 | None:intergenic | 35.0% | |
| ACCTTTCTCTTCCTTAAGTT+GGG | + | chr4.1:46631992-46632011 | MS.gene73643:intron | 35.0% | |
| ATACAGATGAGAGCCAATAA+TGG | + | chr4.1:46631595-46631614 | MS.gene73643:intron | 35.0% | |
| ATACGAGGAAAAATTGGAAG+AGG | + | chr4.1:46630645-46630664 | MS.gene73643:CDS | 35.0% | |
| ATAGAATGCAGCTTGTAAAG+GGG | + | chr4.1:46628839-46628858 | MS.gene73643:CDS | 35.0% | |
| ATGCCAAACCAATTGCATTA+AGG | + | chr4.1:46629101-46629120 | MS.gene73643:intron | 35.0% | |
| ATGCCTTAATGCAATTGGTT+TGG | - | chr4.1:46629107-46629126 | None:intergenic | 35.0% | |
| ATTAGAATCTCTGTGCTTCT+TGG | - | chr4.1:46629854-46629873 | None:intergenic | 35.0% | |
| CAGCATAGTTACATATTGTG+AGG | + | chr4.1:46630214-46630233 | MS.gene73643:intron | 35.0% | |
| CAGCCGAAAAAAGAAAAACA+AGG | + | chr4.1:46629342-46629361 | MS.gene73643:CDS | 35.0% | |
| CATCTATATTTGCACCAACA+TGG | + | chr4.1:46632636-46632655 | MS.gene73643:intron | 35.0% | |
| CATGTTGGTGCAAATATAGA+TGG | - | chr4.1:46632638-46632657 | None:intergenic | 35.0% | |
| CATTTCAGTTACAATGGTCA+AGG | - | chr4.1:46631852-46631871 | None:intergenic | 35.0% | |
| CCCTTTATAATCTCCATTTC+AGG | - | chr4.1:46629586-46629605 | None:intergenic | 35.0% | |
| CGAGAAGAAGAAGAAAAGTA+AGG | + | chr4.1:46628783-46628802 | MS.gene73643:CDS | 35.0% | |
| CTGACATCATTGAGGAAAAA+AGG | - | chr4.1:46629783-46629802 | None:intergenic | 35.0% | |
| GAAACAGCTAGAAATTACCT+AGG | - | chr4.1:46632492-46632511 | None:intergenic | 35.0% | |
| GAAAGTAAGTAAGGGGAAAA+AGG | + | chr4.1:46628747-46628766 | MS.gene73643:CDS | 35.0% | |
| GAAATGACAAACCCAACTTA+AGG | - | chr4.1:46632006-46632025 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAAAGTAAGG+TGG | + | chr4.1:46628786-46628805 | MS.gene73643:CDS | 35.0% | |
| GCATTACTGTTCTGTAATCA+AGG | - | chr4.1:46631366-46631385 | None:intergenic | 35.0% | |
| GGAGATTATAAAGGGAAGAA+AGG | + | chr4.1:46629591-46629610 | MS.gene73643:CDS | 35.0% | |
| GTTGTTGTAGAAGAGCAAAA+TGG | + | chr4.1:46628946-46628965 | MS.gene73643:CDS | 35.0% | |
| TAGAAGAAACAAGGCATGTT+GGG | - | chr4.1:46631417-46631436 | None:intergenic | 35.0% | |
| TAGTCGAAAAAGGAAGAACA+AGG | + | chr4.1:46629627-46629646 | MS.gene73643:CDS | 35.0% | |
| TATGGCAAAGTGAGTTAGTT+TGG | - | chr4.1:46632116-46632135 | None:intergenic | 35.0% | |
| TATTATCCCCCCTGATAAAA+GGG | - | chr4.1:46630784-46630803 | None:intergenic | 35.0% | |
| TATTCCATCTGACATCATTG+AGG | - | chr4.1:46629791-46629810 | None:intergenic | 35.0% | |
| TGCTGTCTTAAACTAGTACA+TGG | + | chr4.1:46632974-46632993 | MS.gene73643:intron | 35.0% | |
| TGGAACCTTATCTATCATTG+TGG | - | chr4.1:46631553-46631572 | None:intergenic | 35.0% | |
| TTAGAAGAAACAAGGCATGT+TGG | - | chr4.1:46631418-46631437 | None:intergenic | 35.0% | |
| TTATTATCCCCCCTGATAAA+AGG | - | chr4.1:46630785-46630804 | None:intergenic | 35.0% | |
| ! | ACAGAGCTTTTCTGTTTATG+GGG | + | chr4.1:46631028-46631047 | MS.gene73643:intron | 35.0% |
| ! | AGTCAGATAACCCTTTTATC+AGG | + | chr4.1:46630771-46630790 | MS.gene73643:intron | 35.0% |
| ! | ATGGCAAAGTGAGTTAGTTT+GGG | - | chr4.1:46632115-46632134 | None:intergenic | 35.0% |
| ! | GACAGAGCTTTTCTGTTTAT+GGG | + | chr4.1:46631027-46631046 | MS.gene73643:intron | 35.0% |
| ! | GTCAGATAACCCTTTTATCA+GGG | + | chr4.1:46630772-46630791 | MS.gene73643:intron | 35.0% |
| ! | TCAGATAACCCTTTTATCAG+GGG | + | chr4.1:46630773-46630792 | MS.gene73643:intron | 35.0% |
| ! | TGACAGAGCTTTTCTGTTTA+TGG | + | chr4.1:46631026-46631045 | MS.gene73643:intron | 35.0% |
| ! | TGATTTTGTTCTGCCTTTTC+TGG | - | chr4.1:46630032-46630051 | None:intergenic | 35.0% |
| ! | TGGTAGTTGGTGCTTAAATT+TGG | + | chr4.1:46631053-46631072 | MS.gene73643:intron | 35.0% |
| ! | TTGGTTGTTTCAGTTGATCA+CGG | + | chr4.1:46629280-46629299 | MS.gene73643:intron | 35.0% |
| ! | TTTTCCTCAATGATGTCAGA+TGG | + | chr4.1:46629784-46629803 | MS.gene73643:intron | 35.0% |
| !! | AGAAAGGTGTTAGAACTTTG+AGG | - | chr4.1:46631980-46631999 | None:intergenic | 35.0% |
| !! | AGCTGCTCTAGAGAATAAAT+TGG | + | chr4.1:46632356-46632375 | MS.gene73643:CDS | 35.0% |
| !! | GAAAGGTGTTAGAACTTTGA+GGG | - | chr4.1:46631979-46631998 | None:intergenic | 35.0% |
| !! | GACGTTGGTGGTTTAATTAA+AGG | + | chr4.1:46632575-46632594 | MS.gene73643:intron | 35.0% |
| !! | TGGTGCTTAAATTTGGTGTT+AGG | + | chr4.1:46631060-46631079 | MS.gene73643:intron | 35.0% |
| !! | TTTTGACTCGTGAACATTGA+AGG | - | chr4.1:46631641-46631660 | None:intergenic | 35.0% |
| !!! | CTTGTTTTTCTTTTTTCGGC+TGG | - | chr4.1:46629344-46629363 | None:intergenic | 35.0% |
| !!! | GAGCTTCTCTTTTTTGAAAG+CGG | - | chr4.1:46632419-46632438 | None:intergenic | 35.0% |
| !!! | TTTTTGAGTTTCTTTGGCCT+AGG | + | chr4.1:46631219-46631238 | MS.gene73643:intron | 35.0% |
| AAACATGTTAATTAGGGGGG+TGG | + | chr4.1:46632606-46632625 | MS.gene73643:intron | 40.0% | |
| AAATGCTGAAGTTGAGACAG+TGG | + | chr4.1:46628813-46628832 | MS.gene73643:CDS | 40.0% | |
| AAGGAGGAATAGGTCTCTAT+TGG | - | chr4.1:46631930-46631949 | None:intergenic | 40.0% | |
| AATTAAACCACCAACGTCGT+TGG | - | chr4.1:46632573-46632592 | None:intergenic | 40.0% | |
| ACCCAACTTAAGGAAGAGAA+AGG | - | chr4.1:46631996-46632015 | None:intergenic | 40.0% | |
| AGGAGGAATAGGTCTCTATT+GGG | - | chr4.1:46631929-46631948 | None:intergenic | 40.0% | |
| ATCACAGAACTCACAAAAGC+CGG | - | chr4.1:46629130-46629149 | None:intergenic | 40.0% | |
| ATTTAAACCAACGACGTTGG+TGG | + | chr4.1:46632563-46632582 | MS.gene73643:intron | 40.0% | |
| CAAAACGACAGATAGCTGAA+TGG | + | chr4.1:46631656-46631675 | MS.gene73643:intron | 40.0% | |
| CACCACAATCCAATAGTCAA+CGG | - | chr4.1:46630420-46630439 | None:intergenic | 40.0% | |
| CACCTTTCTCTTCCTTAAGT+TGG | + | chr4.1:46631991-46632010 | MS.gene73643:intron | 40.0% | |
| CTAAAAGATCTGCTCCATGT+TGG | - | chr4.1:46632653-46632672 | None:intergenic | 40.0% | |
| CTCTGCAAGCAAAACATGAA+TGG | - | chr4.1:46633042-46633061 | None:intergenic | 40.0% | |
| CTGAAATGACAGATCCAAAG+TGG | + | chr4.1:46631864-46631883 | MS.gene73643:intron | 40.0% | |
| GAACATGGAACGTTAAACAC+TGG | - | chr4.1:46632141-46632160 | None:intergenic | 40.0% | |
| GAACGTTAAACACTGGAGTA+TGG | - | chr4.1:46632134-46632153 | None:intergenic | 40.0% | |
| GAATACCATCAAAGTAGACC+TGG | + | chr4.1:46630580-46630599 | MS.gene73643:CDS | 40.0% | |
| GGAATTGCAGAGCAAATTTG+AGG | + | chr4.1:46633067-46633086 | MS.gene73643:CDS | 40.0% | |
| GGTGTTTCACAATACGACAA+TGG | - | chr4.1:46629926-46629945 | None:intergenic | 40.0% | |
| GTATGAGAAGTGAAGCTTGA+AGG | - | chr4.1:46631949-46631968 | None:intergenic | 40.0% | |
| GTCAACGGTCGAAAGAATAA+TGG | - | chr4.1:46630405-46630424 | None:intergenic | 40.0% | |
| TATCCGAAGAAGGAAGAACA+AGG | + | chr4.1:46628882-46628901 | MS.gene73643:CDS | 40.0% | |
| TCGTGAACATTGAAGGTCTT+TGG | - | chr4.1:46631634-46631653 | None:intergenic | 40.0% | |
| TGTCCTTGTTCTTCCTTCTT+CGG | - | chr4.1:46628888-46628907 | None:intergenic | 40.0% | |
| TGTTTATGGGGTATGGTAGT+TGG | + | chr4.1:46631040-46631059 | MS.gene73643:intron | 40.0% | |
| TGTTTCAGTGGATCCTGAAA+TGG | + | chr4.1:46629570-46629589 | MS.gene73643:intron | 40.0% | |
| TTGGTATCCATCAGAACTGT+TGG | - | chr4.1:46631485-46631504 | None:intergenic | 40.0% | |
| ! | ACCAATTGCATTAAGGCATC+CGG | + | chr4.1:46629108-46629127 | MS.gene73643:intron | 40.0% |
| ! | AGAGCAAAATGGTGAGTTGA+TGG | + | chr4.1:46629417-46629436 | MS.gene73643:intron | 40.0% |
| ! | AGATAACCCTTTTATCAGGG+GGG | + | chr4.1:46630775-46630794 | MS.gene73643:intron | 40.0% |
| ! | ATTGGCTCTCATCTGTATCT+TGG | - | chr4.1:46631593-46631612 | None:intergenic | 40.0% |
| ! | CAGATAACCCTTTTATCAGG+GGG | + | chr4.1:46630774-46630793 | MS.gene73643:intron | 40.0% |
| ! | GCTTTTCTGTTTATGGGGTA+TGG | + | chr4.1:46631033-46631052 | MS.gene73643:intron | 40.0% |
| ! | TAGTTTTCTTCCTACCCTTG+TGG | - | chr4.1:46632296-46632315 | None:intergenic | 40.0% |
| ! | TGGCAAAGTGAGTTAGTTTG+GGG | - | chr4.1:46632114-46632133 | None:intergenic | 40.0% |
| ! | TGGTTGTTTCAGTTGATCAC+GGG | + | chr4.1:46629281-46629300 | MS.gene73643:intron | 40.0% |
| ! | TGTTTTGCTTGCAGAGCTAA+TGG | + | chr4.1:46633046-46633065 | MS.gene73643:intron | 40.0% |
| ! | TTCTTTCGACCGTTGACTAT+TGG | + | chr4.1:46630408-46630427 | MS.gene73643:intron | 40.0% |
| ! | TTGTATACCGACTAGTTCGA+TGG | + | chr4.1:46630875-46630894 | MS.gene73643:intron | 40.0% |
| !! | AAAACTACCGACTCTGAAAG+TGG | + | chr4.1:46632309-46632328 | MS.gene73643:CDS | 40.0% |
| !! | AAACTACCGACTCTGAAAGT+GGG | + | chr4.1:46632310-46632329 | MS.gene73643:CDS | 40.0% |
| !! | AAATGGTGAGTTGATGACAG+TGG | + | chr4.1:46629423-46629442 | MS.gene73643:intron | 40.0% |
| !! | AATTTGGTGTTAGGATGTGG+AGG | + | chr4.1:46631069-46631088 | MS.gene73643:intron | 40.0% |
| !! | ATTATAAAGGGCGTTGTCGT+GGG | - | chr4.1:46632078-46632097 | None:intergenic | 40.0% |
| !! | GTGAGTTAATGATAGTGGTG+TGG | + | chr4.1:46628968-46628987 | MS.gene73643:intron | 40.0% |
| !! | GTGAGTTGATGGTTATGATG+TGG | + | chr4.1:46629710-46629729 | MS.gene73643:intron | 40.0% |
| AAGTCACTTCTATGCTGCCT+AGG | - | chr4.1:46631239-46631258 | None:intergenic | 45.0% | |
| AATGATCGCCATCTTGTTGC+TGG | + | chr4.1:46632901-46632920 | MS.gene73643:intron | 45.0% | |
| ACATCGTGTGTATGGCTATG+CGG | - | chr4.1:46629071-46629090 | None:intergenic | 45.0% | |
| AGCAATCCCACTTTCAGAGT+CGG | - | chr4.1:46632319-46632338 | None:intergenic | 45.0% | |
| AGCCACGGAACAAACATCAA+GGG | + | chr4.1:46631897-46631916 | MS.gene73643:intron | 45.0% | |
| AGTAGGGTGGATGTTGGAAA+AGG | - | chr4.1:46630358-46630377 | None:intergenic | 45.0% | |
| AGTGGTTACCTAATGAGCCA+CGG | + | chr4.1:46631882-46631901 | MS.gene73643:intron | 45.0% | |
| ATATTCTTCAGCACCCTAGC+AGG | + | chr4.1:46632033-46632052 | MS.gene73643:intron | 45.0% | |
| ATCCATCAGAACTGTTGGTC+AGG | - | chr4.1:46631480-46631499 | None:intergenic | 45.0% | |
| ATGGTCACTCTTAGGCAGTA+GGG | - | chr4.1:46630374-46630393 | None:intergenic | 45.0% | |
| CGTTTCGGGAGACTATTGAT+TGG | - | chr4.1:46631504-46631523 | None:intergenic | 45.0% | |
| GAAACAAGGCATGTTGGGTA+AGG | - | chr4.1:46631412-46631431 | None:intergenic | 45.0% | |
| GCAAGTTACGGAGGGAAAAA+AGG | + | chr4.1:46629306-46629325 | MS.gene73643:CDS | 45.0% | |
| GCAGCTTGTAAAGGGGAAAA+AGG | + | chr4.1:46628846-46628865 | MS.gene73643:CDS | 45.0% | |
| GGAATACTCAAACTGCAGAG+TGG | + | chr4.1:46630551-46630570 | MS.gene73643:intron | 45.0% | |
| GGCTCATTAGGTAACCACTT+TGG | - | chr4.1:46631881-46631900 | None:intergenic | 45.0% | |
| GTGAAGCTTGAAGGAGGAAT+AGG | - | chr4.1:46631940-46631959 | None:intergenic | 45.0% | |
| TACAATGGTCAAGGTTCTCG+TGG | - | chr4.1:46631843-46631862 | None:intergenic | 45.0% | |
| TAGCCATACACACGATGTGT+CGG | + | chr4.1:46629073-46629092 | MS.gene73643:intron | 45.0% | |
| TATGGTCACTCTTAGGCAGT+AGG | - | chr4.1:46630375-46630394 | None:intergenic | 45.0% | |
| TCAAACTGCAGAGTGGATCA+TGG | + | chr4.1:46630558-46630577 | MS.gene73643:intron | 45.0% | |
| TCTGAAAGTGGGATTGCTGT+GGG | + | chr4.1:46632321-46632340 | MS.gene73643:CDS | 45.0% | |
| TGAGAAGTGAAGCTTGAAGG+AGG | - | chr4.1:46631946-46631965 | None:intergenic | 45.0% | |
| TGATCACGGGATGCAAGTTA+CGG | + | chr4.1:46629294-46629313 | MS.gene73643:CDS | 45.0% | |
| TGTTTGTTCCGTGGCTCATT+AGG | - | chr4.1:46631893-46631912 | None:intergenic | 45.0% | |
| TTCAAGGCCATCGAACTAGT+CGG | - | chr4.1:46630885-46630904 | None:intergenic | 45.0% | |
| TTCCCTTGATGTTTGTTCCG+TGG | - | chr4.1:46631902-46631921 | None:intergenic | 45.0% | |
| ! | AAGGTGTTCCAGCAACAAGA+TGG | - | chr4.1:46632912-46632931 | None:intergenic | 45.0% |
| ! | GACCGTTGACTATTGGATTG+TGG | + | chr4.1:46630415-46630434 | MS.gene73643:intron | 45.0% |
| !! | GATTATAAAGGGCGTTGTCG+TGG | - | chr4.1:46632079-46632098 | None:intergenic | 45.0% |
| !! | ATAAAATCATATAATTTATA+AGG | - | chr4.1:46632931-46632950 | None:intergenic | 5.0% |
| AAAGAAGCCCTTGCTGCAGA+AGG | + | chr4.1:46632249-46632268 | MS.gene73643:CDS | 50.0% | |
| AACCCACCAGAGGCCATTAT+TGG | - | chr4.1:46631611-46631630 | None:intergenic | 50.0% | |
| AAGAAGCCCTTGCTGCAGAA+GGG | + | chr4.1:46632250-46632269 | MS.gene73643:CDS | 50.0% | |
| ACAAGGCATGTTGGGTAAGG+AGG | - | chr4.1:46631409-46631428 | None:intergenic | 50.0% | |
| ACGGTGGTTCAACACCACAA+GGG | + | chr4.1:46632279-46632298 | MS.gene73643:CDS | 50.0% | |
| AGCCAATAATGGCCTCTGGT+GGG | + | chr4.1:46631606-46631625 | MS.gene73643:intron | 50.0% | |
| ATGTTAATTAGGGGGGTGGC+GGG | + | chr4.1:46632610-46632629 | MS.gene73643:intron | 50.0% | |
| CAACCGACACATCGTGTGTA+TGG | - | chr4.1:46629079-46629098 | None:intergenic | 50.0% | |
| CACGCAGGATACTGAGTCAA+TGG | - | chr4.1:46631166-46631185 | None:intergenic | 50.0% | |
| CATCGTGTGTATGGCTATGC+GGG | - | chr4.1:46629070-46629089 | None:intergenic | 50.0% | |
| CATGTTAATTAGGGGGGTGG+CGG | + | chr4.1:46632609-46632628 | MS.gene73643:intron | 50.0% | |
| CCAACCCAGGTCTACTTTGA+TGG | - | chr4.1:46630588-46630607 | None:intergenic | 50.0% | |
| CCATCAAAGTAGACCTGGGT+TGG | + | chr4.1:46630585-46630604 | MS.gene73643:CDS | 50.0% | |
| GAGCCACGGAACAAACATCA+AGG | + | chr4.1:46631896-46631915 | MS.gene73643:intron | 50.0% | |
| GCCGGATGCCTTAATGCAAT+TGG | - | chr4.1:46629112-46629131 | None:intergenic | 50.0% | |
| GGAGATGATGACTGCTCACA+TGG | + | chr4.1:46630080-46630099 | MS.gene73643:CDS | 50.0% | |
| GTCGGAAACCACCAAGTAGT+CGG | + | chr4.1:46629044-46629063 | MS.gene73643:intron | 50.0% | |
| TGAGAGCCAATAATGGCCTC+TGG | + | chr4.1:46631602-46631621 | MS.gene73643:intron | 50.0% | |
| TGAGCAGTCATCATCTCCAG+AGG | - | chr4.1:46630078-46630097 | None:intergenic | 50.0% | |
| TGGTTCAACACCACAAGGGT+AGG | + | chr4.1:46632283-46632302 | MS.gene73643:CDS | 50.0% | |
| TTAGGCAGTAGGGTGGATGT+TGG | - | chr4.1:46630364-46630383 | None:intergenic | 50.0% | |
| ! | CTCTGAAAGTGGGATTGCTG+TGG | + | chr4.1:46632320-46632339 | MS.gene73643:CDS | 50.0% |
| ! | GGGAAAAAGGGCATACGAAC+AGG | + | chr4.1:46628760-46628779 | MS.gene73643:CDS | 50.0% |
| ! | GTCCTGACCAACAGTTCTGA+TGG | + | chr4.1:46631475-46631494 | MS.gene73643:intron | 50.0% |
| ! | TCAAAGTAGACCTGGGTTGG+AGG | + | chr4.1:46630588-46630607 | MS.gene73643:CDS | 50.0% |
| ! | TTTTGCAACACCTCCAACCC+AGG | - | chr4.1:46630601-46630620 | None:intergenic | 50.0% |
| AAGTGGGATTGCTGTGGGCT+CGG | + | chr4.1:46632326-46632345 | MS.gene73643:CDS | 55.0% | |
| ACTAGGCCTTTCGTCCTGCT+AGG | - | chr4.1:46632050-46632069 | None:intergenic | 55.0% | |
| AGAACTGTTGGTCAGGACGC+AGG | - | chr4.1:46631473-46631492 | None:intergenic | 55.0% | |
| AGAAGCCCTTGCTGCAGAAG+GGG | + | chr4.1:46632251-46632270 | MS.gene73643:CDS | 55.0% | |
| CACGGGATGCAAGTTACGGA+GGG | + | chr4.1:46629298-46629317 | MS.gene73643:CDS | 55.0% | |
| CGCCATTGTTGCTGCAGCAA+TGG | - | chr4.1:46631755-46631774 | None:intergenic | 55.0% | |
| CTAGGCCTTTCGTCCTGCTA+GGG | - | chr4.1:46632049-46632068 | None:intergenic | 55.0% | |
| GACGGTGGTTCAACACCACA+AGG | + | chr4.1:46632278-46632297 | MS.gene73643:CDS | 55.0% | |
| GAGCCAATAATGGCCTCTGG+TGG | + | chr4.1:46631605-46631624 | MS.gene73643:intron | 55.0% | |
| GGCCATTGCTGCAGCAACAA+TGG | + | chr4.1:46631750-46631769 | MS.gene73643:intron | 55.0% | |
| GGCGCACATGTTTCAGCAAG+TGG | + | chr4.1:46631771-46631790 | MS.gene73643:intron | 55.0% | |
| GTCACTCTTAGGCAGTAGGG+TGG | - | chr4.1:46630371-46630390 | None:intergenic | 55.0% | |
| TCACGGGATGCAAGTTACGG+AGG | + | chr4.1:46629297-46629316 | MS.gene73643:CDS | 55.0% | |
| TGCAGCAGTTGAGAGCTGCT+AGG | + | chr4.1:46633105-46633124 | MS.gene73643:CDS | 55.0% | |
| !! | AGGTCTTTGGAACCCACCAG+AGG | - | chr4.1:46631621-46631640 | None:intergenic | 55.0% |
| !! | CGTTGTCGTGGGAGAGTACT+AGG | - | chr4.1:46632067-46632086 | None:intergenic | 55.0% |
| !! | GTGAGTTGATGACAGTGGCG+TGG | + | chr4.1:46629428-46629447 | MS.gene73643:intron | 55.0% |
| CAGCACCCTAGCAGGACGAA+AGG | + | chr4.1:46632041-46632060 | MS.gene73643:intron | 60.0% | |
| CCATCCCCCTTCTGCAGCAA+GGG | - | chr4.1:46632259-46632278 | None:intergenic | 60.0% | |
| GAAGCCCTTGCTGCAGAAGG+GGG | + | chr4.1:46632252-46632271 | MS.gene73643:CDS | 60.0% | |
| TATGCGGGCCGACTACTTGG+TGG | - | chr4.1:46629055-46629074 | None:intergenic | 60.0% | |
| TCCATCCCCCTTCTGCAGCA+AGG | - | chr4.1:46632260-46632279 | None:intergenic | 60.0% | |
| TGCTGCAGAAGGGGGATGGA+CGG | + | chr4.1:46632260-46632279 | MS.gene73643:CDS | 60.0% | |
| CCCTTGCTGCAGAAGGGGGA+TGG | + | chr4.1:46632256-46632275 | MS.gene73643:CDS | 65.0% | |
| GGCTATGCGGGCCGACTACT+TGG | - | chr4.1:46629058-46629077 | None:intergenic | 65.0% | |
| TGCAGAAGGGGGATGGACGG+TGG | + | chr4.1:46632263-46632282 | MS.gene73643:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 46628745 | 46633145 | 46628745 | ID=MS.gene73643 |
| chr4.1 | mRNA | 46628745 | 46633145 | 46628745 | ID=MS.gene73643.t1;Parent=MS.gene73643 |
| chr4.1 | exon | 46628745 | 46628967 | 46628745 | ID=MS.gene73643.t1.exon1;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46628745 | 46628967 | 46628745 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| chr4.1 | exon | 46629293 | 46629427 | 46629293 | ID=MS.gene73643.t1.exon2;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46629293 | 46629427 | 46629293 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| chr4.1 | exon | 46629578 | 46629709 | 46629578 | ID=MS.gene73643.t1.exon3;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46629578 | 46629709 | 46629578 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| chr4.1 | exon | 46629803 | 46629895 | 46629803 | ID=MS.gene73643.t1.exon4;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46629803 | 46629895 | 46629803 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| chr4.1 | exon | 46629979 | 46630110 | 46629979 | ID=MS.gene73643.t1.exon5;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46629979 | 46630110 | 46629979 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| chr4.1 | exon | 46630569 | 46630666 | 46630569 | ID=MS.gene73643.t1.exon6;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46630569 | 46630666 | 46630569 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| chr4.1 | exon | 46632237 | 46632447 | 46632237 | ID=MS.gene73643.t1.exon7;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46632237 | 46632447 | 46632237 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| chr4.1 | exon | 46633060 | 46633145 | 46633060 | ID=MS.gene73643.t1.exon8;Parent=MS.gene73643.t1 |
| chr4.1 | CDS | 46633060 | 46633145 | 46633060 | ID=cds.MS.gene73643.t1;Parent=MS.gene73643.t1 |
| Gene Sequence |
| Protein sequence |
