Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74919.t1 | XP_024637580.1 | 99.7 | 342 | 1 | 0 | 1 | 342 | 1 | 342 | 2.30E-202 | 714.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74919.t1 | P48489 | 90.4 | 301 | 28 | 1 | 1 | 300 | 15 | 315 | 5.6e-165 | 581.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74919.t1 | A0A072VMY9 | 99.7 | 342 | 1 | 0 | 1 | 342 | 1 | 342 | 1.7e-202 | 714.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene74919 | 0.810346 | 1.21E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene74919 | 0.861471 | 1.00E-63 | -1.69E-46 |
| MS.gene049861 | MS.gene74919 | 0.822768 | 1.98E-53 | -1.69E-46 |
| MS.gene04998 | MS.gene74919 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene74919 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene74919 | 0.83775 | 4.32E-57 | -1.69E-46 |
| MS.gene050359 | MS.gene74919 | 0.824703 | 6.99E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene74919 | 0.821124 | 4.77E-53 | -1.69E-46 |
| MS.gene050752 | MS.gene74919 | 0.82449 | 7.85E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene74919 | 0.820592 | 6.32E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene74919 | 0.840811 | 6.94E-58 | -1.69E-46 |
| MS.gene051184 | MS.gene74919 | 0.82686 | 2.15E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene74919 | 0.816796 | 4.60E-52 | -1.69E-46 |
| MS.gene051597 | MS.gene74919 | 0.813974 | 1.95E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene74919 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene051987 | MS.gene74919 | 0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene74919 | -0.80705 | 6.11E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene74919 | 0.812232 | 4.70E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene74919 | 0.853247 | 2.71E-61 | -1.69E-46 |
| MS.gene053298 | MS.gene74919 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene74919 | 0.812816 | 3.51E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene74919 | 0.809646 | 1.71E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene74919 | 0.803696 | 3.08E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene74919 | 0.826238 | 3.03E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene74919 | 0.806763 | 7.02E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene74919 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene054957 | MS.gene74919 | 0.827371 | 1.62E-54 | -1.69E-46 |
| MS.gene056097 | MS.gene74919 | 0.848308 | 6.66E-60 | -1.69E-46 |
| MS.gene056181 | MS.gene74919 | 0.810063 | 1.39E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene74919 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene74919 | 0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene056849 | MS.gene74919 | 0.847345 | 1.23E-59 | -1.69E-46 |
| MS.gene056986 | MS.gene74919 | 0.822978 | 1.77E-53 | -1.69E-46 |
| MS.gene056992 | MS.gene74919 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene74919 | -0.80961 | 1.74E-50 | -1.69E-46 |
| MS.gene057622 | MS.gene74919 | 0.839484 | 1.54E-57 | -1.69E-46 |
| MS.gene05781 | MS.gene74919 | 0.822472 | 2.33E-53 | -1.69E-46 |
| MS.gene057999 | MS.gene74919 | 0.852844 | 3.53E-61 | -1.69E-46 |
| MS.gene058054 | MS.gene74919 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene058074 | MS.gene74919 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene74919 | 0.801949 | 7.07E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene74919 | 0.814773 | 1.30E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene74919 | 0.800377 | 1.48E-48 | -1.69E-46 |
| MS.gene059007 | MS.gene74919 | 0.822955 | 1.80E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene74919 | 0.834612 | 2.71E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene74919 | 0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene74919 | 0.813399 | 2.61E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74919.t1 | MTR_1g079950 | 99.708 | 342 | 1 | 0 | 1 | 342 | 1 | 342 | 0.0 | 714 |
| MS.gene74919.t1 | MTR_1g079950 | 100.000 | 320 | 0 | 0 | 1 | 320 | 30 | 349 | 0.0 | 670 |
| MS.gene74919.t1 | MTR_1g079950 | 100.000 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 0.0 | 668 |
| MS.gene74919.t1 | MTR_1g079950 | 100.000 | 319 | 0 | 0 | 1 | 319 | 1 | 319 | 0.0 | 666 |
| MS.gene74919.t1 | MTR_7g116380 | 92.812 | 320 | 23 | 0 | 1 | 320 | 1 | 320 | 0.0 | 635 |
| MS.gene74919.t1 | MTR_7g116380 | 92.790 | 319 | 23 | 0 | 1 | 319 | 1 | 319 | 0.0 | 633 |
| MS.gene74919.t1 | MTR_1g079950 | 99.647 | 283 | 1 | 0 | 60 | 342 | 34 | 316 | 0.0 | 598 |
| MS.gene74919.t1 | MTR_5g081230 | 89.073 | 302 | 32 | 1 | 1 | 301 | 17 | 318 | 0.0 | 569 |
| MS.gene74919.t1 | MTR_1g074880 | 80.734 | 327 | 60 | 2 | 1 | 327 | 1 | 324 | 0.0 | 566 |
| MS.gene74919.t1 | MTR_1g074880 | 82.748 | 313 | 54 | 0 | 1 | 313 | 1 | 313 | 0.0 | 565 |
| MS.gene74919.t1 | MTR_1g043240 | 82.555 | 321 | 55 | 1 | 1 | 320 | 1 | 321 | 0.0 | 565 |
| MS.gene74919.t1 | MTR_8g098980 | 79.114 | 316 | 64 | 2 | 1 | 315 | 1 | 315 | 0.0 | 541 |
| MS.gene74919.t1 | MTR_8g005010 | 80.623 | 289 | 56 | 0 | 6 | 294 | 4 | 292 | 0.0 | 505 |
| MS.gene74919.t1 | MTR_7g112870 | 74.843 | 318 | 74 | 2 | 1 | 318 | 5 | 316 | 1.18e-180 | 502 |
| MS.gene74919.t1 | MTR_1g074880 | 82.156 | 269 | 45 | 2 | 59 | 327 | 4 | 269 | 8.43e-171 | 476 |
| MS.gene74919.t1 | MTR_1g074880 | 84.706 | 255 | 39 | 0 | 59 | 313 | 4 | 258 | 1.68e-170 | 474 |
| MS.gene74919.t1 | MTR_7g107310 | 45.608 | 296 | 159 | 2 | 4 | 298 | 5 | 299 | 8.71e-98 | 292 |
| MS.gene74919.t1 | MTR_8g062430 | 46.488 | 299 | 151 | 3 | 3 | 300 | 4 | 294 | 3.43e-97 | 290 |
| MS.gene74919.t1 | MTR_5g093990 | 47.464 | 276 | 144 | 1 | 26 | 300 | 17 | 292 | 1.49e-96 | 288 |
| MS.gene74919.t1 | MTR_8g085610 | 45.918 | 294 | 150 | 3 | 6 | 298 | 9 | 294 | 2.57e-96 | 288 |
| MS.gene74919.t1 | MTR_5g037200 | 45.819 | 299 | 153 | 3 | 3 | 300 | 4 | 294 | 3.27e-95 | 285 |
| MS.gene74919.t1 | MTR_8g085610 | 47.037 | 270 | 141 | 2 | 30 | 298 | 2 | 270 | 1.83e-93 | 280 |
| MS.gene74919.t1 | MTR_1g039380 | 42.652 | 279 | 157 | 3 | 25 | 301 | 15 | 292 | 3.60e-90 | 272 |
| MS.gene74919.t1 | MTR_1g039380 | 42.857 | 266 | 149 | 3 | 38 | 301 | 4 | 268 | 2.65e-87 | 264 |
| MS.gene74919.t1 | MTR_1g089370 | 46.774 | 310 | 146 | 7 | 3 | 294 | 522 | 830 | 4.94e-84 | 272 |
| MS.gene74919.t1 | MTR_2g087530 | 46.926 | 309 | 147 | 7 | 3 | 294 | 525 | 833 | 2.26e-82 | 268 |
| MS.gene74919.t1 | MTR_2g087530 | 46.926 | 309 | 147 | 7 | 3 | 294 | 638 | 946 | 4.22e-82 | 268 |
| MS.gene74919.t1 | MTR_4g050540 | 46.926 | 309 | 147 | 7 | 3 | 294 | 643 | 951 | 4.70e-82 | 268 |
| MS.gene74919.t1 | MTR_3g452710 | 43.182 | 264 | 143 | 4 | 22 | 279 | 184 | 446 | 1.86e-70 | 227 |
| MS.gene74919.t1 | MTR_3g452710 | 43.182 | 264 | 143 | 4 | 22 | 279 | 251 | 513 | 7.50e-70 | 228 |
| MS.gene74919.t1 | MTR_2g100130 | 42.570 | 249 | 135 | 5 | 38 | 279 | 118 | 365 | 2.43e-66 | 214 |
| MS.gene74919.t1 | MTR_2g100130 | 42.570 | 249 | 135 | 5 | 38 | 279 | 217 | 464 | 1.89e-65 | 215 |
| MS.gene74919.t1 | MTR_2g100130 | 42.570 | 249 | 135 | 5 | 38 | 279 | 227 | 474 | 2.32e-65 | 215 |
| MS.gene74919.t1 | MTR_2g100130 | 42.570 | 249 | 135 | 5 | 38 | 279 | 227 | 474 | 2.68e-65 | 215 |
| MS.gene74919.t1 | MTR_2g100130 | 42.570 | 249 | 135 | 5 | 38 | 279 | 188 | 435 | 2.74e-65 | 214 |
| MS.gene74919.t1 | MTR_2g100130 | 42.570 | 249 | 134 | 6 | 38 | 279 | 227 | 473 | 4.92e-64 | 211 |
| MS.gene74919.t1 | MTR_2g100130 | 42.570 | 249 | 134 | 6 | 38 | 279 | 188 | 434 | 6.31e-64 | 210 |
| MS.gene74919.t1 | MTR_2g100130 | 43.096 | 239 | 128 | 5 | 38 | 269 | 227 | 464 | 1.06e-63 | 210 |
| MS.gene74919.t1 | MTR_2g100160 | 42.742 | 248 | 134 | 5 | 39 | 279 | 138 | 384 | 1.40e-60 | 200 |
| MS.gene74919.t1 | MTR_5g037200 | 47.644 | 191 | 92 | 2 | 2 | 191 | 3 | 186 | 1.98e-59 | 191 |
| MS.gene74919.t1 | MTR_8g072600 | 30.746 | 335 | 162 | 11 | 33 | 297 | 100 | 434 | 4.41e-37 | 139 |
| MS.gene74919.t1 | MTR_8g072600 | 31.873 | 251 | 127 | 7 | 33 | 239 | 100 | 350 | 3.52e-30 | 118 |
| MS.gene74919.t1 | MTR_2g099710 | 29.670 | 273 | 146 | 11 | 31 | 268 | 211 | 472 | 5.41e-22 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74919.t1 | AT2G39840 | 89.073 | 302 | 32 | 1 | 1 | 301 | 14 | 315 | 0.0 | 570 |
| MS.gene74919.t1 | AT5G59160 | 85.479 | 303 | 42 | 2 | 1 | 301 | 9 | 311 | 0.0 | 548 |
| MS.gene74919.t1 | AT5G59160 | 85.479 | 303 | 42 | 2 | 1 | 301 | 9 | 311 | 0.0 | 548 |
| MS.gene74919.t1 | AT5G59160 | 85.479 | 303 | 42 | 2 | 1 | 301 | 9 | 311 | 0.0 | 548 |
| MS.gene74919.t1 | AT2G29400 | 85.099 | 302 | 41 | 3 | 1 | 299 | 15 | 315 | 0.0 | 548 |
| MS.gene74919.t1 | AT3G46820 | 82.508 | 303 | 51 | 1 | 1 | 301 | 9 | 311 | 0.0 | 537 |
| MS.gene74919.t1 | AT1G64040 | 79.114 | 316 | 64 | 2 | 1 | 315 | 1 | 315 | 0.0 | 536 |
| MS.gene74919.t1 | AT5G43380 | 77.812 | 320 | 71 | 0 | 1 | 320 | 1 | 320 | 0.0 | 530 |
| MS.gene74919.t1 | AT5G43380 | 77.570 | 321 | 72 | 0 | 1 | 321 | 1 | 321 | 0.0 | 530 |
| MS.gene74919.t1 | AT5G43380 | 77.570 | 321 | 72 | 0 | 1 | 321 | 1 | 321 | 0.0 | 530 |
| MS.gene74919.t1 | AT4G11240 | 76.266 | 316 | 73 | 2 | 1 | 315 | 1 | 315 | 0.0 | 521 |
| MS.gene74919.t1 | AT5G27840 | 80.000 | 295 | 57 | 1 | 1 | 295 | 9 | 301 | 0.0 | 505 |
| MS.gene74919.t1 | AT5G27840 | 80.000 | 295 | 57 | 1 | 1 | 295 | 9 | 301 | 0.0 | 504 |
| MS.gene74919.t1 | AT5G27840 | 80.000 | 295 | 57 | 1 | 1 | 295 | 9 | 301 | 0.0 | 504 |
| MS.gene74919.t1 | AT5G27840 | 80.000 | 295 | 57 | 1 | 1 | 295 | 9 | 301 | 0.0 | 504 |
| MS.gene74919.t1 | AT3G05580 | 80.000 | 295 | 57 | 1 | 1 | 295 | 9 | 301 | 1.54e-179 | 499 |
| MS.gene74919.t1 | AT3G05580 | 79.675 | 246 | 48 | 1 | 1 | 246 | 9 | 252 | 5.80e-146 | 412 |
| MS.gene74919.t1 | AT2G42500 | 46.939 | 294 | 147 | 3 | 6 | 298 | 14 | 299 | 6.82e-100 | 297 |
| MS.gene74919.t1 | AT5G55260 | 47.826 | 276 | 143 | 1 | 26 | 300 | 17 | 292 | 4.28e-99 | 295 |
| MS.gene74919.t1 | AT3G58500 | 46.259 | 294 | 149 | 3 | 6 | 298 | 14 | 299 | 3.18e-98 | 293 |
| MS.gene74919.t1 | AT1G10430 | 45.946 | 296 | 151 | 3 | 6 | 300 | 7 | 294 | 4.34e-96 | 288 |
| MS.gene74919.t1 | AT1G10430 | 45.946 | 296 | 151 | 3 | 6 | 300 | 7 | 294 | 4.34e-96 | 288 |
| MS.gene74919.t1 | AT1G69960 | 45.608 | 296 | 152 | 3 | 6 | 300 | 8 | 295 | 5.05e-96 | 287 |
| MS.gene74919.t1 | AT4G26720 | 45.290 | 276 | 150 | 1 | 26 | 300 | 17 | 292 | 5.51e-96 | 287 |
| MS.gene74919.t1 | AT1G59830 | 45.270 | 296 | 153 | 3 | 6 | 300 | 7 | 294 | 1.83e-94 | 283 |
| MS.gene74919.t1 | AT5G55260 | 41.640 | 317 | 143 | 2 | 26 | 300 | 17 | 333 | 1.67e-90 | 275 |
| MS.gene74919.t1 | AT1G50370 | 41.935 | 279 | 159 | 3 | 25 | 301 | 15 | 292 | 2.81e-89 | 270 |
| MS.gene74919.t1 | AT3G19980 | 42.294 | 279 | 158 | 3 | 25 | 301 | 15 | 292 | 3.07e-89 | 270 |
| MS.gene74919.t1 | AT4G03080 | 46.452 | 310 | 147 | 8 | 3 | 294 | 524 | 832 | 6.13e-83 | 269 |
| MS.gene74919.t1 | AT1G59830 | 47.791 | 249 | 121 | 3 | 6 | 253 | 7 | 247 | 1.97e-82 | 251 |
| MS.gene74919.t1 | AT2G27210 | 46.452 | 310 | 147 | 8 | 3 | 294 | 644 | 952 | 6.74e-81 | 265 |
| MS.gene74919.t1 | AT2G27210 | 46.452 | 310 | 147 | 8 | 3 | 294 | 649 | 957 | 7.42e-81 | 265 |
| MS.gene74919.t1 | AT1G08420 | 46.602 | 309 | 146 | 8 | 4 | 294 | 656 | 963 | 3.20e-80 | 264 |
| MS.gene74919.t1 | AT1G08420 | 46.602 | 309 | 146 | 8 | 4 | 294 | 661 | 968 | 3.65e-80 | 264 |
| MS.gene74919.t1 | AT2G42500 | 49.321 | 221 | 110 | 2 | 79 | 298 | 33 | 252 | 1.18e-77 | 239 |
| MS.gene74919.t1 | AT1G03445 | 45.775 | 284 | 137 | 7 | 26 | 294 | 476 | 757 | 2.83e-77 | 252 |
| MS.gene74919.t1 | AT1G03445 | 45.775 | 284 | 137 | 7 | 26 | 294 | 476 | 757 | 3.11e-77 | 252 |
| MS.gene74919.t1 | AT2G42810 | 42.966 | 263 | 143 | 4 | 23 | 279 | 187 | 448 | 7.43e-69 | 223 |
| MS.gene74919.t1 | AT2G42810 | 42.966 | 263 | 143 | 4 | 23 | 279 | 187 | 448 | 7.43e-69 | 223 |
| MS.gene74919.t1 | AT2G42810 | 42.966 | 263 | 143 | 4 | 23 | 279 | 187 | 448 | 7.43e-69 | 223 |
| MS.gene74919.t1 | AT2G42810 | 42.966 | 263 | 143 | 4 | 23 | 279 | 240 | 501 | 2.65e-68 | 223 |
| MS.gene74919.t1 | AT2G42810 | 42.966 | 263 | 143 | 4 | 23 | 279 | 241 | 502 | 3.05e-68 | 223 |
| MS.gene74919.t1 | AT2G42500 | 44.910 | 167 | 81 | 4 | 6 | 168 | 14 | 173 | 4.66e-46 | 155 |
| MS.gene74919.t1 | AT2G42500 | 45.087 | 173 | 82 | 5 | 6 | 174 | 14 | 177 | 5.49e-46 | 155 |
| MS.gene74919.t1 | AT2G42500 | 46.541 | 159 | 74 | 4 | 6 | 160 | 14 | 165 | 1.83e-45 | 153 |
| MS.gene74919.t1 | AT5G63870 | 31.325 | 332 | 160 | 12 | 33 | 297 | 52 | 382 | 2.02e-35 | 133 |
| MS.gene74919.t1 | AT5G63870 | 31.325 | 332 | 160 | 12 | 33 | 297 | 52 | 382 | 2.02e-35 | 133 |
| MS.gene74919.t1 | AT5G63870 | 32.661 | 248 | 125 | 8 | 33 | 239 | 52 | 298 | 4.64e-29 | 114 |
| MS.gene74919.t1 | AT1G48120 | 29.897 | 291 | 144 | 7 | 38 | 268 | 635 | 925 | 9.79e-27 | 112 |
| MS.gene74919.t1 | AT5G10900 | 32.068 | 237 | 134 | 7 | 34 | 245 | 199 | 433 | 7.63e-24 | 102 |
| MS.gene74919.t1 | AT5G10900 | 32.068 | 237 | 134 | 7 | 34 | 245 | 199 | 433 | 8.12e-24 | 102 |
| MS.gene74919.t1 | AT5G10900 | 32.068 | 237 | 134 | 7 | 34 | 245 | 199 | 433 | 1.01e-23 | 102 |
Find 72 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCTGACTTACATAATT+TGG | 0.116324 | 1.1:+59432294 | MS.gene74919:CDS |
| TATCAGCTGGCTTTAATATT+TGG | 0.125928 | 1.1:-59432968 | None:intergenic |
| CTTGCAGCAACCTAATTTAT+TGG | 0.157351 | 1.1:+59427691 | MS.gene74919:CDS |
| GTCAATATTCTGATCTTCTA+AGG | 0.254833 | 1.1:+59431966 | MS.gene74919:CDS |
| GCTTCAAGCTCCAATAAATT+AGG | 0.261678 | 1.1:-59427701 | None:intergenic |
| GCTTCTATTAACCGTATATA+TGG | 0.271123 | 1.1:+59432148 | MS.gene74919:CDS |
| GTTTCTTCAGAAGCATGATT+TGG | 0.317593 | 1.1:+59432468 | MS.gene74919:CDS |
| GAAGGTTCAATGTAAGGATA+TGG | 0.319884 | 1.1:+59432191 | MS.gene74919:CDS |
| AAATTACCACAAATCTTAAT+AGG | 0.331310 | 1.1:-59427725 | None:intergenic |
| AGAGATGGAACAAGCAGTTT+TGG | 0.343273 | 1.1:+59427562 | None:intergenic |
| TCTTATTTGCCGTGCTCATC+AGG | 0.350335 | 1.1:+59432492 | MS.gene74919:CDS |
| TCGCAAAGCAAACCTGTATC+AGG | 0.371447 | 1.1:-59432352 | None:intergenic |
| CAACCTTGAACTTCTTTGCT+AGG | 0.376807 | 1.1:-59432391 | None:intergenic |
| TAGTCGTGCAAGAAAGCATT+TGG | 0.386899 | 1.1:+59433437 | MS.gene74919:intron |
| GACAGCTGAACCTGCTTCCC+TGG | 0.395189 | 1.1:-59427623 | None:intergenic |
| GTTTGCTTTGCGATCTCCTC+TGG | 0.402187 | 1.1:+59432362 | MS.gene74919:CDS |
| CCGACTGATGTGCCTGATAC+AGG | 0.405760 | 1.1:+59432340 | MS.gene74919:CDS |
| CATCATAAAATCCATATATA+CGG | 0.411444 | 1.1:-59432159 | None:intergenic |
| GAAGCACCTATTAAGATTTG+TGG | 0.413609 | 1.1:+59427719 | MS.gene74919:CDS |
| ATATACATTTGGTGCTGATA+AGG | 0.419606 | 1.1:+59432438 | MS.gene74919:CDS |
| GGTTAATAGAAGCACATTCA+TGG | 0.425951 | 1.1:-59432138 | None:intergenic |
| TCAAACTCCCCACAGTAATT+AGG | 0.429403 | 1.1:-59432897 | None:intergenic |
| TAGCAAAGAAGTTCAAGGTT+GGG | 0.430512 | 1.1:+59432393 | MS.gene74919:CDS |
| CTTCCTACCTTTACACCTGC+TGG | 0.435417 | 1.1:-59433044 | None:intergenic |
| ACACCTGCTGGAGAGTTCCC+TGG | 0.438032 | 1.1:-59433032 | None:intergenic |
| AACCTTGAACTTCTTTGCTA+GGG | 0.443540 | 1.1:-59432390 | None:intergenic |
| AGTCGTGCAAGAAAGCATTT+GGG | 0.444539 | 1.1:+59433438 | MS.gene74919:intron |
| GATATGAGTTCTTTGCTAAC+CGG | 0.448265 | 1.1:+59432850 | MS.gene74919:CDS |
| GTAAAAGAAGGTTCAATGTA+AGG | 0.466323 | 1.1:+59432185 | MS.gene74919:CDS |
| TGATCCAAATTATGTAAGTC+AGG | 0.467364 | 1.1:-59432298 | None:intergenic |
| AGGGGAGTGTCATATACATT+TGG | 0.476024 | 1.1:+59432427 | MS.gene74919:CDS |
| CTTGAAGTTCGTAGCCGTCC+AGG | 0.490260 | 1.1:+59427605 | MS.gene74919:CDS |
| CTGGACGGCTACGAACTTCA+AGG | 0.496906 | 1.1:-59427604 | None:intergenic |
| TCGTAGCCGTCCAGGGAAGC+AGG | 0.501536 | 1.1:+59427613 | MS.gene74919:CDS |
| TTTGACCAGGTGGTGGAGGA+TGG | 0.504276 | 1.1:+59432828 | MS.gene74919:intron |
| GACCCTAGCAAAGAAGTTCA+AGG | 0.508316 | 1.1:+59432388 | MS.gene74919:CDS |
| AGCAAAGAAGTTCAAGGTTG+GGG | 0.509636 | 1.1:+59432394 | MS.gene74919:CDS |
| GCAGGTTCAGCTGTCGGAGA+CGG | 0.516990 | 1.1:+59427631 | MS.gene74919:CDS |
| TTGGGTGATTATGTGGATCG+AGG | 0.524951 | 1.1:+59432034 | MS.gene74919:CDS |
| AAGGTTGGGGAATGAATGAC+AGG | 0.526085 | 1.1:+59432407 | MS.gene74919:CDS |
| TTTATGATGAGTGTAAAAGA+AGG | 0.531875 | 1.1:+59432173 | MS.gene74919:CDS |
| AAAATATTGTTACAAGCTGC+CGG | 0.536379 | 1.1:-59432869 | None:intergenic |
| GAACTCTCCAGCAGGTGTAA+AGG | 0.539592 | 1.1:+59433037 | MS.gene74919:CDS |
| TGGGTGATTATGTGGATCGA+GGG | 0.542417 | 1.1:+59432035 | MS.gene74919:CDS |
| TTTCGGCGCCTAATTACTGT+GGG | 0.546628 | 1.1:+59432889 | MS.gene74919:CDS |
| TGGGGCATTGAATTTAGCAA+TGG | 0.556455 | 1.1:+59433457 | MS.gene74919:CDS |
| GCACATCAGTCGGCCTCTGT+AGG | 0.567167 | 1.1:-59432330 | None:intergenic |
| CCTGTATCAGGCACATCAGT+CGG | 0.573201 | 1.1:-59432340 | None:intergenic |
| TCATCAATGAGGGCTGCCAC+AGG | 0.577241 | 1.1:-59432244 | None:intergenic |
| GTATGGTGGATTACCTCCTC+AGG | 0.580103 | 1.1:+59431997 | MS.gene74919:CDS |
| CTAGCAAAGAAGTTCAAGGT+TGG | 0.581376 | 1.1:+59432392 | MS.gene74919:CDS |
| AGTACGACCACTACTAAACC+AGG | 0.581513 | 1.1:+59433014 | MS.gene74919:CDS |
| TTGAAGTTCGTAGCCGTCCA+GGG | 0.585517 | 1.1:+59427606 | MS.gene74919:CDS |
| AGGGAAGCAGGTTCAGCTGT+CGG | 0.588957 | 1.1:+59427625 | MS.gene74919:CDS |
| AACAAGTAGTTGGCCTGAGG+AGG | 0.589163 | 1.1:-59432010 | None:intergenic |
| TTGCTTCAATTGCCTACCTG+TGG | 0.593940 | 1.1:+59432228 | MS.gene74919:CDS |
| AGAGTTCCCTGGTTTAGTAG+TGG | 0.600863 | 1.1:-59433021 | None:intergenic |
| AAACCAGGGAACTCTCCAGC+AGG | 0.604331 | 1.1:+59433029 | MS.gene74919:CDS |
| GTTCAATGTAAGGATATGGA+AGG | 0.613524 | 1.1:+59432195 | MS.gene74919:CDS |
| CTTTGCTAGGGTCTGACCAG+AGG | 0.615007 | 1.1:-59432378 | None:intergenic |
| GCTGAACCTGCTTCCCTGGA+CGG | 0.632476 | 1.1:-59427619 | None:intergenic |
| CAATGAGGGCTGCCACAGGT+AGG | 0.639222 | 1.1:-59432240 | None:intergenic |
| AATGGAACAAGCTACATACA+TGG | 0.640138 | 1.1:+59433475 | MS.gene74919:CDS |
| AAAGTTTAACCTGATGAGCA+CGG | 0.643579 | 1.1:-59432501 | None:intergenic |
| TAGCAGTAGAACATAGCTGA+CGG | 0.659481 | 1.1:-59427658 | None:intergenic |
| GTCGTGCAAGAAAGCATTTG+GGG | 0.664855 | 1.1:+59433439 | MS.gene74919:intron |
| TGTGGGGAGTTTGACAACGC+TGG | 0.676964 | 1.1:+59432906 | MS.gene74919:CDS |
| TTCGGCGCCTAATTACTGTG+GGG | 0.690124 | 1.1:+59432890 | MS.gene74919:CDS |
| AGGTTGGGGAATGAATGACA+GGG | 0.722361 | 1.1:+59432408 | MS.gene74919:CDS |
| GTACGACCACTACTAAACCA+GGG | 0.740638 | 1.1:+59433015 | MS.gene74919:CDS |
| GGTTGGGGAATGAATGACAG+GGG | 0.740649 | 1.1:+59432409 | MS.gene74919:CDS |
| ATCAGATTAGAAACCTACAG+AGG | 0.757889 | 1.1:+59432317 | MS.gene74919:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCCTTTAATTAAATTA+TGG | + | chr1.1:59429724-59429743 | MS.gene74919:intron | 10.0% |
| !! | AGAAAGTAATTATTAAAATA+GGG | + | chr1.1:59433238-59433257 | MS.gene74919:intron | 10.0% |
| !! | TAGAAAGTAATTATTAAAAT+AGG | + | chr1.1:59433237-59433256 | MS.gene74919:intron | 10.0% |
| !!! | AAGAATTTTAAAAAAAGATA+AGG | - | chr1.1:59431023-59431042 | None:intergenic | 10.0% |
| !!! | AATTTTATCATTTCAAATAA+TGG | - | chr1.1:59431180-59431199 | None:intergenic | 10.0% |
| !!! | TGATTATAAAATTTTAGTTT+CGG | + | chr1.1:59431407-59431426 | MS.gene74919:intron | 10.0% |
| !!! | TTTTTCTTATTGTATTATTT+CGG | + | chr1.1:59427847-59427866 | MS.gene74919:intron | 10.0% |
| !! | CTCTTAATTTACATAATAAA+AGG | - | chr1.1:59429696-59429715 | None:intergenic | 15.0% |
| !! | CTTCAAAAAAAAAATATGAA+AGG | + | chr1.1:59431730-59431749 | MS.gene74919:intron | 15.0% |
| !! | GAAAGTAATTATTAAAATAG+GGG | + | chr1.1:59433239-59433258 | MS.gene74919:intron | 15.0% |
| !! | GATAAAAATAAGTGTAAAAT+AGG | + | chr1.1:59431682-59431701 | MS.gene74919:intron | 15.0% |
| !! | TAAGAACGAAAATTAATTAT+GGG | + | chr1.1:59430981-59431000 | MS.gene74919:intron | 15.0% |
| !! | TTAAGAACGAAAATTAATTA+TGG | + | chr1.1:59430980-59430999 | MS.gene74919:intron | 15.0% |
| !!! | CTTTCATATTTTTTTTTTGA+AGG | - | chr1.1:59431732-59431751 | None:intergenic | 15.0% |
| !!! | CTTTTATTATGTAAATTAAG+AGG | + | chr1.1:59429694-59429713 | MS.gene74919:intron | 15.0% |
| !!! | GATTATAAAATTTTAGTTTC+GGG | + | chr1.1:59431408-59431427 | MS.gene74919:intron | 15.0% |
| !!! | TCTTTTTGAAATATCTTTTT+CGG | + | chr1.1:59431078-59431097 | MS.gene74919:intron | 15.0% |
| !! | AAATTACCACAAATCTTAAT+AGG | - | chr1.1:59427728-59427747 | None:intergenic | 20.0% |
| !! | AAGAACGAAAATTAATTATG+GGG | + | chr1.1:59430982-59431001 | MS.gene74919:intron | 20.0% |
| !! | AAGTGCCATAATTTAATTAA+AGG | - | chr1.1:59429732-59429751 | None:intergenic | 20.0% |
| !! | AATAGTAAAAAATAGGCAAT+AGG | - | chr1.1:59431522-59431541 | None:intergenic | 20.0% |
| !! | ATGATGTTAGATTATCTAAA+TGG | + | chr1.1:59429789-59429808 | MS.gene74919:intron | 20.0% |
| !! | CATCATAAAATCCATATATA+CGG | - | chr1.1:59432162-59432181 | None:intergenic | 20.0% |
| !! | GCTATTATTAGAAGAATAAA+AGG | + | chr1.1:59429485-59429504 | MS.gene74919:intron | 20.0% |
| !! | TATAAAATAGATTTGATCTG+AGG | + | chr1.1:59430574-59430593 | MS.gene74919:intron | 20.0% |
| !! | TCTAATTAACTTCAATTCAA+TGG | - | chr1.1:59430003-59430022 | None:intergenic | 20.0% |
| !! | TCTTGTCAATAGTAAAAAAT+AGG | - | chr1.1:59431529-59431548 | None:intergenic | 20.0% |
| !! | TGATGTTAGATTATCTAAAT+GGG | + | chr1.1:59429790-59429809 | MS.gene74919:intron | 20.0% |
| !! | TGGATTATGTTCATATAAAT+GGG | - | chr1.1:59431825-59431844 | None:intergenic | 20.0% |
| !! | TTTAATTACATGTTACCATT+TGG | + | chr1.1:59431310-59431329 | MS.gene74919:intron | 20.0% |
| !! | TTTATGTGATGAAAAAGATA+TGG | + | chr1.1:59429759-59429778 | MS.gene74919:intron | 20.0% |
| !!! | AAAAAAACAAAGCTCAATTT+TGG | + | chr1.1:59432990-59433009 | MS.gene74919:CDS | 20.0% |
| !!! | AATTTGCTAGTAAAATATGT+CGG | - | chr1.1:59430879-59430898 | None:intergenic | 20.0% |
| !!! | ATGGATTATGTTCATATAAA+TGG | - | chr1.1:59431826-59431845 | None:intergenic | 20.0% |
| !!! | TTATTTTATATGCTAAGAGA+AGG | - | chr1.1:59432084-59432103 | None:intergenic | 20.0% |
| !!! | TTTATACTATGTTTTTGTAG+AGG | + | chr1.1:59430759-59430778 | MS.gene74919:intron | 20.0% |
| ! | AACTCAAAATGATATCCAAA+TGG | - | chr1.1:59431328-59431347 | None:intergenic | 25.0% |
| ! | AGAAGTAAGTAAAATAGTAC+AGG | + | chr1.1:59429383-59429402 | MS.gene74919:intron | 25.0% |
| ! | AGACGATATTAAAGAAGAAT+TGG | - | chr1.1:59430608-59430627 | None:intergenic | 25.0% |
| ! | AGGTATTAACGATATTTACT+TGG | + | chr1.1:59429505-59429524 | MS.gene74919:intron | 25.0% |
| ! | ATGAACAAGTCAAATAACAT+AGG | - | chr1.1:59428910-59428929 | None:intergenic | 25.0% |
| ! | CATACACAAAACTTAAATCA+CGG | - | chr1.1:59427900-59427919 | None:intergenic | 25.0% |
| ! | GAAAATTAATTATGGGGTAT+TGG | + | chr1.1:59430988-59431007 | MS.gene74919:intron | 25.0% |
| ! | GAAGTAAGTAAAATAGTACA+GGG | + | chr1.1:59429384-59429403 | MS.gene74919:intron | 25.0% |
| ! | GACGATATTAAAGAAGAATT+GGG | - | chr1.1:59430607-59430626 | None:intergenic | 25.0% |
| ! | TATGTGAGAAATGGTTAATA+TGG | - | chr1.1:59433380-59433399 | None:intergenic | 25.0% |
| ! | TCTTAAATCCAAATATGATG+TGG | - | chr1.1:59431876-59431895 | None:intergenic | 25.0% |
| ! | TGAACAAGTCAAATAACATA+GGG | - | chr1.1:59428909-59428928 | None:intergenic | 25.0% |
| ! | TGTTCATATAAATGGGTAAA+TGG | - | chr1.1:59431818-59431837 | None:intergenic | 25.0% |
| ! | TTGAGTTTAAACTAGCAAAT+AGG | + | chr1.1:59431341-59431360 | MS.gene74919:intron | 25.0% |
| ! | TTTATGATGAGTGTAAAAGA+AGG | + | chr1.1:59432173-59432192 | MS.gene74919:CDS | 25.0% |
| !! | ACAAAATCTTTTCATCAATG+AGG | - | chr1.1:59432258-59432277 | None:intergenic | 25.0% |
| !! | ATTTTCATATCACAGAAATG+GGG | - | chr1.1:59432576-59432595 | None:intergenic | 25.0% |
| !! | CAAAATCTTTTCATCAATGA+GGG | - | chr1.1:59432257-59432276 | None:intergenic | 25.0% |
| !! | CATTCATAAGTAACTTTTCA+AGG | + | chr1.1:59431377-59431396 | MS.gene74919:intron | 25.0% |
| !! | CATTTTCATATCACAGAAAT+GGG | - | chr1.1:59432577-59432596 | None:intergenic | 25.0% |
| !! | GGAAAAGCATAAAAAGAAAA+AGG | - | chr1.1:59429982-59430001 | None:intergenic | 25.0% |
| !! | TAGAGAATTTTTCCTTGAAA+TGG | + | chr1.1:59430291-59430310 | MS.gene74919:intron | 25.0% |
| !! | TCATTTTCATATCACAGAAA+TGG | - | chr1.1:59432578-59432597 | None:intergenic | 25.0% |
| !! | TTATCATATGACATTTTGCT+TGG | + | chr1.1:59427822-59427841 | MS.gene74919:intron | 25.0% |
| !!! | CTGAGAATTTTTTTCTTTTG+CGG | + | chr1.1:59432110-59432129 | MS.gene74919:CDS | 25.0% |
| !!! | TAAAATTTTAGTTTCGGGAA+TGG | + | chr1.1:59431413-59431432 | MS.gene74919:intron | 25.0% |
| !!! | TATCCTTTTGTTGATTTTTC+AGG | + | chr1.1:59431932-59431951 | MS.gene74919:intron | 25.0% |
| !!! | TGAGAATTTTTTTCTTTTGC+GGG | + | chr1.1:59432111-59432130 | MS.gene74919:CDS | 25.0% |
| !!! | TTTCAATGAGTTTTGATTGT+GGG | + | chr1.1:59428471-59428490 | MS.gene74919:intron | 25.0% |
| !!! | TTTGAAGTATTGCTAATAGA+AGG | + | chr1.1:59431436-59431455 | MS.gene74919:intron | 25.0% |
| !!! | TTTTCAATGAGTTTTGATTG+TGG | + | chr1.1:59428470-59428489 | MS.gene74919:intron | 25.0% |
| AAAATATTGTTACAAGCTGC+CGG | - | chr1.1:59432872-59432891 | None:intergenic | 30.0% | |
| AACAAATATGACCCATTTCA+AGG | - | chr1.1:59430396-59430415 | None:intergenic | 30.0% | |
| AACCATTTCTCACATAACTT+CGG | + | chr1.1:59433384-59433403 | MS.gene74919:intron | 30.0% | |
| AACCGGAACTTAAAAGATAA+AGG | - | chr1.1:59430102-59430121 | None:intergenic | 30.0% | |
| AAGCAACCTTTCATATTGTT+GGG | - | chr1.1:59431709-59431728 | None:intergenic | 30.0% | |
| AAGTTATCTCATCCAATGTT+AGG | - | chr1.1:59430825-59430844 | None:intergenic | 30.0% | |
| AATAGATCACAGAACAGAAA+AGG | - | chr1.1:59433319-59433338 | None:intergenic | 30.0% | |
| ACCAATTTACTGTCACATTT+GGG | - | chr1.1:59430139-59430158 | None:intergenic | 30.0% | |
| AGAGAGAAAAAGAATCAAGA+CGG | - | chr1.1:59433127-59433146 | None:intergenic | 30.0% | |
| AGTTGTTAAAAGCCTAACAT+TGG | + | chr1.1:59430810-59430829 | MS.gene74919:intron | 30.0% | |
| AGTTTAAACTAGCAAATAGG+AGG | + | chr1.1:59431344-59431363 | MS.gene74919:intron | 30.0% | |
| ATAACAAGGACTTCAATAGA+TGG | - | chr1.1:59431845-59431864 | None:intergenic | 30.0% | |
| ATGATTTCGTGTTTCAACAT+GGG | + | chr1.1:59427784-59427803 | MS.gene74919:intron | 30.0% | |
| ATTCCTTTATCTTGAGTTTG+TGG | + | chr1.1:59429445-59429464 | MS.gene74919:intron | 30.0% | |
| ATTGTTACTCTTAGATTCCA+AGG | + | chr1.1:59430684-59430703 | MS.gene74919:intron | 30.0% | |
| ATTTCAAGCATTCCATTTCA+AGG | - | chr1.1:59430306-59430325 | None:intergenic | 30.0% | |
| CAAATTAGCAATGACCAAAT+AGG | + | chr1.1:59430893-59430912 | MS.gene74919:intron | 30.0% | |
| CATAATAAAAGGTCACATCA+AGG | - | chr1.1:59429685-59429704 | None:intergenic | 30.0% | |
| CATCATAAACAGCTGATAAA+TGG | - | chr1.1:59432722-59432741 | None:intergenic | 30.0% | |
| CGCAAAAGAAAAAAATTCTC+AGG | - | chr1.1:59432112-59432131 | None:intergenic | 30.0% | |
| CTGGAATCAGTTGTATAAAA+AGG | + | chr1.1:59429357-59429376 | MS.gene74919:intron | 30.0% | |
| GAACAAGTCAAATAACATAG+GGG | - | chr1.1:59428908-59428927 | None:intergenic | 30.0% | |
| GCTTCTATTAACCGTATATA+TGG | + | chr1.1:59432148-59432167 | MS.gene74919:CDS | 30.0% | |
| GTAAAAGAAGGTTCAATGTA+AGG | + | chr1.1:59432185-59432204 | MS.gene74919:CDS | 30.0% | |
| GTCAATATTCTGATCTTCTA+AGG | + | chr1.1:59431966-59431985 | MS.gene74919:CDS | 30.0% | |
| GTTTAAACTAGCAAATAGGA+GGG | + | chr1.1:59431345-59431364 | MS.gene74919:intron | 30.0% | |
| TAAACACTTGTGTTGTAGTA+AGG | - | chr1.1:59428562-59428581 | None:intergenic | 30.0% | |
| TACCAATTTACTGTCACATT+TGG | - | chr1.1:59430140-59430159 | None:intergenic | 30.0% | |
| TATAAAAACCTAGTTGACCA+TGG | - | chr1.1:59430745-59430764 | None:intergenic | 30.0% | |
| TGACATAGGAAGTAAGAAAT+AGG | - | chr1.1:59428639-59428658 | None:intergenic | 30.0% | |
| TGATCCAAATTATGTAAGTC+AGG | - | chr1.1:59432301-59432320 | None:intergenic | 30.0% | |
| TTACAAGTTAGTTAGAGAAG+TGG | + | chr1.1:59429528-59429547 | MS.gene74919:intron | 30.0% | |
| TTCCTTTATCTTGAGTTTGT+GGG | + | chr1.1:59429446-59429465 | MS.gene74919:intron | 30.0% | |
| TTCTCCTGACTTACATAATT+TGG | + | chr1.1:59432294-59432313 | MS.gene74919:CDS | 30.0% | |
| ! | ATAATTATCTTTTGACCAGG+TGG | + | chr1.1:59432818-59432837 | MS.gene74919:intron | 30.0% |
| ! | ATGGGTCATATTTGTTAAAC+TGG | + | chr1.1:59430400-59430419 | MS.gene74919:intron | 30.0% |
| ! | CATGTTTGAAGTTTAAACCT+TGG | - | chr1.1:59430704-59430723 | None:intergenic | 30.0% |
| ! | GACAACACCTTACAATTTTA+GGG | - | chr1.1:59431227-59431246 | None:intergenic | 30.0% |
| ! | GCAGCTTGTAACAATATTTT+CGG | + | chr1.1:59432872-59432891 | MS.gene74919:CDS | 30.0% |
| ! | TCTTTTCTTTTCTCTGTATC+AGG | + | chr1.1:59427981-59428000 | MS.gene74919:intron | 30.0% |
| ! | TGACAACACCTTACAATTTT+AGG | - | chr1.1:59431228-59431247 | None:intergenic | 30.0% |
| ! | TGCATAATTATCTTTTGACC+AGG | + | chr1.1:59432815-59432834 | MS.gene74919:intron | 30.0% |
| ! | TGTCAAAACAATTTTGCTCA+AGG | - | chr1.1:59430537-59430556 | None:intergenic | 30.0% |
| !! | AGGTTCTGTTTCTGAATATT+GGG | + | chr1.1:59430180-59430199 | MS.gene74919:intron | 30.0% |
| !! | ATATACATTTGGTGCTGATA+AGG | + | chr1.1:59432438-59432457 | MS.gene74919:CDS | 30.0% |
| !! | ATGATCATGCTTCTAGAATT+TGG | + | chr1.1:59433207-59433226 | MS.gene74919:intron | 30.0% |
| !! | TAGTGTTTTGTTGAGATTGA+AGG | + | chr1.1:59430344-59430363 | MS.gene74919:intron | 30.0% |
| !! | TATCAGCTGGCTTTAATATT+TGG | - | chr1.1:59432971-59432990 | None:intergenic | 30.0% |
| !!! | AGCTTTGTTTTTTTATCAGC+TGG | - | chr1.1:59432984-59433003 | None:intergenic | 30.0% |
| !!! | ATTTTGACTGAAGATAGAGA+AGG | - | chr1.1:59429943-59429962 | None:intergenic | 30.0% |
| !!! | CTCCTTTATCTTTTAAGTTC+CGG | + | chr1.1:59430097-59430116 | MS.gene74919:intron | 30.0% |
| !!! | GAGAATTTTTTTCTTTTGCG+GGG | + | chr1.1:59432112-59432131 | MS.gene74919:CDS | 30.0% |
| !!! | TGTTATTTTTCAGCTACAGA+GGG | + | chr1.1:59430046-59430065 | MS.gene74919:intron | 30.0% |
| !!! | TTACAATTTTAGGGCCAAAA+CGG | - | chr1.1:59431218-59431237 | None:intergenic | 30.0% |
| AAAGTTTAACCTGATGAGCA+CGG | - | chr1.1:59432504-59432523 | None:intergenic | 35.0% | |
| AACCTTGAACTTCTTTGCTA+GGG | - | chr1.1:59432393-59432412 | None:intergenic | 35.0% | |
| AATGGAACAAGCTACATACA+TGG | + | chr1.1:59433475-59433494 | MS.gene74919:CDS | 35.0% | |
| ACAACACAAGTGTTTATCGA+TGG | + | chr1.1:59428566-59428585 | MS.gene74919:intron | 35.0% | |
| AGCAACATATTGAGAACCAA+AGG | - | chr1.1:59432529-59432548 | None:intergenic | 35.0% | |
| AGGAAGGATCAAATTCTGTA+AGG | + | chr1.1:59428853-59428872 | MS.gene74919:intron | 35.0% | |
| AGTGTCTTAGTGAAGTTTGT+GGG | + | chr1.1:59427930-59427949 | MS.gene74919:intron | 35.0% | |
| AGTTTCACTATACGCCTATT+TGG | - | chr1.1:59430910-59430929 | None:intergenic | 35.0% | |
| ATAGGACCCAACAATATGAA+AGG | + | chr1.1:59431700-59431719 | MS.gene74919:intron | 35.0% | |
| ATCACCCAAAAACAAGTAGT+TGG | - | chr1.1:59432023-59432042 | None:intergenic | 35.0% | |
| ATCAGATTAGAAACCTACAG+AGG | + | chr1.1:59432317-59432336 | MS.gene74919:CDS | 35.0% | |
| ATCCGAAGTTATGTGAGAAA+TGG | - | chr1.1:59433389-59433408 | None:intergenic | 35.0% | |
| ATCTGATATATCCTTGTGCA+CGG | + | chr1.1:59431761-59431780 | MS.gene74919:intron | 35.0% | |
| ATGTGACAGTAAATTGGTAC+AGG | + | chr1.1:59430141-59430160 | MS.gene74919:intron | 35.0% | |
| CAAAGTTGAATCAGTCTAGA+TGG | + | chr1.1:59430945-59430964 | MS.gene74919:intron | 35.0% | |
| CAAGAGAAGTTGTGTGAAAT+TGG | + | chr1.1:59430264-59430283 | MS.gene74919:intron | 35.0% | |
| CAATCCTAATCTTTCTCTCA+GGG | + | chr1.1:59432611-59432630 | MS.gene74919:intron | 35.0% | |
| CATAGGGGAGTTATTCTAAA+CGG | - | chr1.1:59428893-59428912 | None:intergenic | 35.0% | |
| CATGATTTCGTGTTTCAACA+TGG | + | chr1.1:59427783-59427802 | MS.gene74919:intron | 35.0% | |
| CTCACATAACTTCGGATTAT+TGG | + | chr1.1:59433392-59433411 | MS.gene74919:intron | 35.0% | |
| CTTGCAGCAACCTAATTTAT+TGG | + | chr1.1:59427691-59427710 | MS.gene74919:CDS | 35.0% | |
| GAAGCAACCTTTCATATTGT+TGG | - | chr1.1:59431710-59431729 | None:intergenic | 35.0% | |
| GAAGGTTCAATGTAAGGATA+TGG | + | chr1.1:59432191-59432210 | MS.gene74919:CDS | 35.0% | |
| GAATATGGAGATGAGAGAAA+TGG | + | chr1.1:59428830-59428849 | MS.gene74919:intron | 35.0% | |
| GATATGAGTTCTTTGCTAAC+CGG | + | chr1.1:59432850-59432869 | MS.gene74919:CDS | 35.0% | |
| GATGAAGTTCCAGATTTCAA+AGG | + | chr1.1:59429332-59429351 | MS.gene74919:intron | 35.0% | |
| GCTTCAAGCTCCAATAAATT+AGG | - | chr1.1:59427704-59427723 | None:intergenic | 35.0% | |
| GCTTTCCAACCATGAAAAAT+CGG | - | chr1.1:59428617-59428636 | None:intergenic | 35.0% | |
| GTTCAATGTAAGGATATGGA+AGG | + | chr1.1:59432195-59432214 | MS.gene74919:CDS | 35.0% | |
| TAAACCTCAGTTGTCAATAG+CGG | + | chr1.1:59428208-59428227 | MS.gene74919:intron | 35.0% | |
| TAGCAAAGAAGTTCAAGGTT+GGG | + | chr1.1:59432393-59432412 | MS.gene74919:CDS | 35.0% | |
| TAGTAAAATATGTCGGCAGA+TGG | - | chr1.1:59430872-59430891 | None:intergenic | 35.0% | |
| TATCACAACAACGCAGAATT+TGG | + | chr1.1:59433264-59433283 | MS.gene74919:intron | 35.0% | |
| TCAAGATAAAGGAATCCTTC+AGG | - | chr1.1:59429440-59429459 | None:intergenic | 35.0% | |
| TCATCTCCATATTCTTGGAA+AGG | - | chr1.1:59428824-59428843 | None:intergenic | 35.0% | |
| TCGCCTGAAAAATCAACAAA+AGG | - | chr1.1:59431938-59431957 | None:intergenic | 35.0% | |
| TCTTACTTCCTATGTCAAGT+AGG | + | chr1.1:59428642-59428661 | MS.gene74919:intron | 35.0% | |
| TGAACAACTGGGAAAAATGA+TGG | + | chr1.1:59430660-59430679 | MS.gene74919:intron | 35.0% | |
| TGCAAAGCTAAAATCTGTGT+TGG | - | chr1.1:59429019-59429038 | None:intergenic | 35.0% | |
| TGCTTTGATAAGTTGCTAGT+TGG | + | chr1.1:59428028-59428047 | MS.gene74919:intron | 35.0% | |
| TTAGATTATCTAAATGGGCG+AGG | + | chr1.1:59429795-59429814 | MS.gene74919:intron | 35.0% | |
| TTCTCTCATCTCCATATTCT+TGG | - | chr1.1:59428829-59428848 | None:intergenic | 35.0% | |
| ! | AAATCTGAAACTTGCTCAAG+GGG | + | chr1.1:59431552-59431571 | MS.gene74919:intron | 35.0% |
| ! | AAGATAGAGAAGGCATGAAA+AGG | - | chr1.1:59429933-59429952 | None:intergenic | 35.0% |
| ! | AGATAGAGAAGGCATGAAAA+GGG | - | chr1.1:59429932-59429951 | None:intergenic | 35.0% |
| ! | AGCTGATAAATGGACTTGAA+CGG | - | chr1.1:59432712-59432731 | None:intergenic | 35.0% |
| ! | AGTGTAGACTGTTTGTTTCT+AGG | + | chr1.1:59430206-59430225 | MS.gene74919:intron | 35.0% |
| ! | CAAATCTGAAACTTGCTCAA+GGG | + | chr1.1:59431551-59431570 | MS.gene74919:intron | 35.0% |
| ! | CAACCATGAAAAATCGGTTT+AGG | - | chr1.1:59428611-59428630 | None:intergenic | 35.0% |
| ! | CATCTAGACTGATTCAACTT+TGG | - | chr1.1:59430947-59430966 | None:intergenic | 35.0% |
| ! | GAAAAGATTTTGTGCATGCA+TGG | + | chr1.1:59432265-59432284 | MS.gene74919:CDS | 35.0% |
| ! | GAAGCACCTATTAAGATTTG+TGG | + | chr1.1:59427719-59427738 | MS.gene74919:CDS | 35.0% |
| ! | GGTTAATAGAAGCACATTCA+TGG | - | chr1.1:59432141-59432160 | None:intergenic | 35.0% |
| ! | GTTTCAAGTGTCCTTGAAAT+GGG | + | chr1.1:59430382-59430401 | MS.gene74919:intron | 35.0% |
| ! | GTTTCTTCAGAAGCATGATT+TGG | + | chr1.1:59432468-59432487 | MS.gene74919:CDS | 35.0% |
| ! | TCAAATCTGAAACTTGCTCA+AGG | + | chr1.1:59431550-59431569 | MS.gene74919:intron | 35.0% |
| ! | TCAGGTTAAACTTTTGCCTT+TGG | + | chr1.1:59432510-59432529 | MS.gene74919:intron | 35.0% |
| ! | TGATTCTTTTTCTCTCTGTC+TGG | + | chr1.1:59433130-59433149 | MS.gene74919:intron | 35.0% |
| ! | TGGTCAATTGATTTCACCTT+GGG | - | chr1.1:59429844-59429863 | None:intergenic | 35.0% |
| ! | TGTTTCAAGTGTCCTTGAAA+TGG | + | chr1.1:59430381-59430400 | MS.gene74919:intron | 35.0% |
| ! | TTCGGTATTTTGTACATGTC+TGG | + | chr1.1:59427865-59427884 | MS.gene74919:intron | 35.0% |
| ! | TTGGTTCTCAATATGTTGCT+GGG | + | chr1.1:59432529-59432548 | MS.gene74919:intron | 35.0% |
| !! | AAGGTGAAAGTATTTGTGGT+TGG | - | chr1.1:59429666-59429685 | None:intergenic | 35.0% |
| !! | ATTCCAGATCCTTTGAAATC+TGG | - | chr1.1:59429344-59429363 | None:intergenic | 35.0% |
| !! | CATCAAGGTGAAAGTATTTG+TGG | - | chr1.1:59429670-59429689 | None:intergenic | 35.0% |
| !! | CTAAACCGATTTTTCATGGT+TGG | + | chr1.1:59428609-59428628 | MS.gene74919:intron | 35.0% |
| !! | GAGGTTCTGTTTCTGAATAT+TGG | + | chr1.1:59430179-59430198 | MS.gene74919:intron | 35.0% |
| !! | GTTTTGGCCCTAAAATTGTA+AGG | + | chr1.1:59431217-59431236 | MS.gene74919:intron | 35.0% |
| !! | TTTGGTTCTCAATATGTTGC+TGG | + | chr1.1:59432528-59432547 | MS.gene74919:intron | 35.0% |
| !!! | CTTCTAAGGCTTTTTGAGTA+TGG | + | chr1.1:59431980-59431999 | MS.gene74919:CDS | 35.0% |
| !!! | CTTGTTTTTGGGTGATTATG+TGG | + | chr1.1:59432027-59432046 | MS.gene74919:CDS | 35.0% |
| !!! | GTGTTATTTTTCAGCTACAG+AGG | + | chr1.1:59430045-59430064 | MS.gene74919:intron | 35.0% |
| AACAAAGTTGGGTGATGACT+TGG | + | chr1.1:59431107-59431126 | MS.gene74919:intron | 40.0% | |
| ACAACGCAGAATTTGGAGAT+AGG | + | chr1.1:59433271-59433290 | MS.gene74919:intron | 40.0% | |
| ACCTGGGTGAACCTATTTAA+AGG | + | chr1.1:59431485-59431504 | MS.gene74919:intron | 40.0% | |
| ACTATCAGAGAAAAGGTGAG+AGG | - | chr1.1:59429111-59429130 | None:intergenic | 40.0% | |
| AGAGAGCTGTCCCTTTAAAT+AGG | - | chr1.1:59431499-59431518 | None:intergenic | 40.0% | |
| AGCAAAGAAGTTCAAGGTTG+GGG | + | chr1.1:59432394-59432413 | MS.gene74919:CDS | 40.0% | |
| AGGAAGGTTTCAGCTTTCAA+TGG | - | chr1.1:59429900-59429919 | None:intergenic | 40.0% | |
| AGTTAGTTAGAGAAGTGGCT+AGG | + | chr1.1:59429533-59429552 | MS.gene74919:intron | 40.0% | |
| ATAATCCAAACTCAGCCTGA+AGG | + | chr1.1:59429422-59429441 | MS.gene74919:intron | 40.0% | |
| ATCACGGGGATAAACATGTT+GGG | + | chr1.1:59428304-59428323 | MS.gene74919:intron | 40.0% | |
| ATGACCCTGAGAGAAAGATT+AGG | - | chr1.1:59432618-59432637 | None:intergenic | 40.0% | |
| CAAACCTCTGATGTCAATAG+TGG | + | chr1.1:59428071-59428090 | MS.gene74919:intron | 40.0% | |
| CAACCTTGAACTTCTTTGCT+AGG | - | chr1.1:59432394-59432413 | None:intergenic | 40.0% | |
| CAACGCAGAATTTGGAGATA+GGG | + | chr1.1:59433272-59433291 | MS.gene74919:intron | 40.0% | |
| CAATTCTTCGATCGCAATAC+AGG | - | chr1.1:59432761-59432780 | None:intergenic | 40.0% | |
| CAATTGACCAGATACTGTTG+TGG | + | chr1.1:59429854-59429873 | MS.gene74919:intron | 40.0% | |
| CCAATCTTTGTGCCTCAAAT+CGG | + | chr1.1:59429136-59429155 | MS.gene74919:intron | 40.0% | |
| CCTGGGTGAACCTATTTAAA+GGG | + | chr1.1:59431486-59431505 | MS.gene74919:intron | 40.0% | |
| CTAGCAAAGAAGTTCAAGGT+TGG | + | chr1.1:59432392-59432411 | MS.gene74919:CDS | 40.0% | |
| CTCCCACAAACTCAAGATAA+AGG | - | chr1.1:59429451-59429470 | None:intergenic | 40.0% | |
| CTTCCTCCTTTCCAAGAATA+TGG | + | chr1.1:59428815-59428834 | MS.gene74919:intron | 40.0% | |
| GAGTGTCTTAGTGAAGTTTG+TGG | + | chr1.1:59427929-59427948 | MS.gene74919:intron | 40.0% | |
| GATAAACATGTTGGGTTTCG+TGG | + | chr1.1:59428312-59428331 | MS.gene74919:intron | 40.0% | |
| GCAATCCTAATCTTTCTCTC+AGG | + | chr1.1:59432610-59432629 | MS.gene74919:intron | 40.0% | |
| GCCCAAATGTGACAGTAAAT+TGG | + | chr1.1:59430135-59430154 | MS.gene74919:intron | 40.0% | |
| GCTTCTACAATGAACAAGCT+GGG | + | chr1.1:59428667-59428686 | MS.gene74919:intron | 40.0% | |
| GGAGGTTACTATCAGAGAAA+AGG | - | chr1.1:59429118-59429137 | None:intergenic | 40.0% | |
| GTCACTATGATCAAGACCAA+CGG | + | chr1.1:59431588-59431607 | MS.gene74919:intron | 40.0% | |
| GTTAAAATGAGGGAAGGTCA+TGG | - | chr1.1:59428946-59428965 | None:intergenic | 40.0% | |
| GTTCCAGATTTCAAAGGATC+TGG | + | chr1.1:59429338-59429357 | MS.gene74919:intron | 40.0% | |
| TAAGACAGCAACACCAACAT+GGG | - | chr1.1:59429051-59429070 | None:intergenic | 40.0% | |
| TACTTCCTATGTCAAGTAGG+TGG | + | chr1.1:59428645-59428664 | MS.gene74919:intron | 40.0% | |
| TAGCAGTAGAACATAGCTGA+CGG | - | chr1.1:59427661-59427680 | None:intergenic | 40.0% | |
| TATGGAGATGAGAGAAATGG+AGG | + | chr1.1:59428833-59428852 | MS.gene74919:intron | 40.0% | |
| TCAAACTCCCCACAGTAATT+AGG | - | chr1.1:59432900-59432919 | None:intergenic | 40.0% | |
| TCACTATGATCAAGACCAAC+GGG | + | chr1.1:59431589-59431608 | MS.gene74919:intron | 40.0% | |
| TCTCCATATTCTTGGAAAGG+AGG | - | chr1.1:59428821-59428840 | None:intergenic | 40.0% | |
| TGACACACATTTATGCACTG+AGG | + | chr1.1:59432676-59432695 | MS.gene74919:intron | 40.0% | |
| TTCGGTTGCACAACAAAGTT+GGG | + | chr1.1:59431096-59431115 | MS.gene74919:intron | 40.0% | |
| TTGCTGAGATGGATAAGTAG+AGG | - | chr1.1:59429221-59429240 | None:intergenic | 40.0% | |
| TTTCACCTTGGGTCATTAGT+TGG | - | chr1.1:59429833-59429852 | None:intergenic | 40.0% | |
| TTTCAGCTACAGAGGGATAA+GGG | + | chr1.1:59430053-59430072 | MS.gene74919:intron | 40.0% | |
| TTTCGGTTGCACAACAAAGT+TGG | + | chr1.1:59431095-59431114 | MS.gene74919:intron | 40.0% | |
| ! | AAAAACAAGTAGTTGGCCTG+AGG | - | chr1.1:59432016-59432035 | None:intergenic | 40.0% |
| ! | AAGATTTTGTGCATGCATGG+CGG | + | chr1.1:59432268-59432287 | MS.gene74919:CDS | 40.0% |
| ! | ATTATCTTTTGACCAGGTGG+TGG | + | chr1.1:59432821-59432840 | MS.gene74919:intron | 40.0% |
| ! | ATTTGAGGCACAAAGATTGG+AGG | - | chr1.1:59429136-59429155 | None:intergenic | 40.0% |
| ! | CATGAAAAATCGGTTTAGGC+AGG | - | chr1.1:59428607-59428626 | None:intergenic | 40.0% |
| ! | CCATGTTTTGCGTATGTGTT+CGG | + | chr1.1:59430023-59430042 | MS.gene74919:intron | 40.0% |
| ! | CTGGTCAATTGATTTCACCT+TGG | - | chr1.1:59429845-59429864 | None:intergenic | 40.0% |
| ! | GATGTCAGAGTGGATTCATT+CGG | - | chr1.1:59428698-59428717 | None:intergenic | 40.0% |
| ! | TGGTCTTGATCATAGTGACA+AGG | - | chr1.1:59431587-59431606 | None:intergenic | 40.0% |
| ! | TTTTCAGCTACAGAGGGATA+AGG | + | chr1.1:59430052-59430071 | MS.gene74919:intron | 40.0% |
| !! | AAAGGAGGAAGCTCTAAAGA+CGG | - | chr1.1:59428806-59428825 | None:intergenic | 40.0% |
| !! | AGGGGAGTGTCATATACATT+TGG | + | chr1.1:59432427-59432446 | MS.gene74919:CDS | 40.0% |
| !! | AGTCGTGCAAGAAAGCATTT+GGG | + | chr1.1:59433438-59433457 | MS.gene74919:intron | 40.0% |
| !! | CAGGCCAACTACTTGTTTTT+GGG | + | chr1.1:59432016-59432035 | MS.gene74919:CDS | 40.0% |
| !! | CTGCCTAAACCGATTTTTCA+TGG | + | chr1.1:59428605-59428624 | MS.gene74919:intron | 40.0% |
| !! | TAGTCGTGCAAGAAAGCATT+TGG | + | chr1.1:59433437-59433456 | MS.gene74919:intron | 40.0% |
| !! | TCAGGCCAACTACTTGTTTT+TGG | + | chr1.1:59432015-59432034 | MS.gene74919:CDS | 40.0% |
| !! | TGGGGCATTGAATTTAGCAA+TGG | + | chr1.1:59433457-59433476 | MS.gene74919:CDS | 40.0% |
| !!! | CTAAGGCTTTTTGAGTATGG+TGG | + | chr1.1:59431983-59432002 | MS.gene74919:CDS | 40.0% |
| !!! | GATTTTTCAGGCGACATACA+TGG | + | chr1.1:59431944-59431963 | MS.gene74919:intron | 40.0% |
| AAAAGGGCAAAAGGCTAGGA+AGG | - | chr1.1:59429916-59429935 | None:intergenic | 45.0% | |
| AAACATGTTGGGTTTCGTGG+TGG | + | chr1.1:59428315-59428334 | MS.gene74919:intron | 45.0% | |
| AAATTGGTACAGGCCCTGTA+TGG | + | chr1.1:59430151-59430170 | MS.gene74919:intron | 45.0% | |
| AAGGTTGGGGAATGAATGAC+AGG | + | chr1.1:59432407-59432426 | MS.gene74919:CDS | 45.0% | |
| AATGCATCCTTCTGCATCCA+TGG | + | chr1.1:59430725-59430744 | MS.gene74919:intron | 45.0% | |
| ACAAGTGTTTATCGATGGCC+AGG | + | chr1.1:59428571-59428590 | MS.gene74919:intron | 45.0% | |
| ACAGCCACTATTGACATCAG+AGG | - | chr1.1:59428078-59428097 | None:intergenic | 45.0% | |
| AGAACCTCCATGTCCATACA+GGG | - | chr1.1:59430167-59430186 | None:intergenic | 45.0% | |
| AGAAGCCACCTACTTGACAT+AGG | - | chr1.1:59428653-59428672 | None:intergenic | 45.0% | |
| AGAGGACAGAGAGTAGTCTT+AGG | - | chr1.1:59429203-59429222 | None:intergenic | 45.0% | |
| AGAGTTCCCTGGTTTAGTAG+TGG | - | chr1.1:59433024-59433043 | None:intergenic | 45.0% | |
| AGGTTGGGGAATGAATGACA+GGG | + | chr1.1:59432408-59432427 | MS.gene74919:CDS | 45.0% | |
| AGTACGACCACTACTAAACC+AGG | + | chr1.1:59433014-59433033 | MS.gene74919:CDS | 45.0% | |
| ATCAACATGAGCTTGCGGTT+TGG | - | chr1.1:59429085-59429104 | None:intergenic | 45.0% | |
| ATCTTTGTGCCTCAAATCGG+TGG | + | chr1.1:59429139-59429158 | MS.gene74919:intron | 45.0% | |
| ATGCTTTAGCCAGTTAAGCC+AGG | + | chr1.1:59430629-59430648 | MS.gene74919:intron | 45.0% | |
| ATGTCAATAGTGGCTGTGAG+CGG | + | chr1.1:59428081-59428100 | MS.gene74919:intron | 45.0% | |
| CAACATGTTTATCCCCGTGA+TGG | - | chr1.1:59428305-59428324 | None:intergenic | 45.0% | |
| CACTATGATCAAGACCAACG+GGG | + | chr1.1:59431590-59431609 | MS.gene74919:intron | 45.0% | |
| CATCACGGGGATAAACATGT+TGG | + | chr1.1:59428303-59428322 | MS.gene74919:intron | 45.0% | |
| CATGAAAAGGGCAAAAGGCT+AGG | - | chr1.1:59429920-59429939 | None:intergenic | 45.0% | |
| CCCTTTAAATAGGTTCACCC+AGG | - | chr1.1:59431489-59431508 | None:intergenic | 45.0% | |
| CCGAACACATACGCAAAACA+TGG | - | chr1.1:59430026-59430045 | None:intergenic | 45.0% | |
| CGACTCTACACTCGGATAAA+AGG | - | chr1.1:59431465-59431484 | None:intergenic | 45.0% | |
| CTAAGACAGCAACACCAACA+TGG | - | chr1.1:59429052-59429071 | None:intergenic | 45.0% | |
| CTCAAATCGGTGGTAAAGAG+AGG | + | chr1.1:59429149-59429168 | MS.gene74919:intron | 45.0% | |
| CTGAGGGGCAGTTAAAATGA+GGG | - | chr1.1:59428956-59428975 | None:intergenic | 45.0% | |
| GACCCTAGCAAAGAAGTTCA+AGG | + | chr1.1:59432388-59432407 | MS.gene74919:CDS | 45.0% | |
| GAGAAATGCATTGGGTTTCG+TGG | + | chr1.1:59428177-59428196 | MS.gene74919:intron | 45.0% | |
| GAGAGGCTTCGTTGTCAATT+CGG | + | chr1.1:59429166-59429185 | MS.gene74919:intron | 45.0% | |
| GAGATGAGAGAAATGGAGGA+AGG | + | chr1.1:59428837-59428856 | MS.gene74919:intron | 45.0% | |
| GCACAAAATCAACCGTGAGT+TGG | + | chr1.1:59433096-59433115 | MS.gene74919:intron | 45.0% | |
| GGAACATCAACATGAGCTTG+CGG | - | chr1.1:59429090-59429109 | None:intergenic | 45.0% | |
| GGCTTCTACAATGAACAAGC+TGG | + | chr1.1:59428666-59428685 | MS.gene74919:intron | 45.0% | |
| GTACGACCACTACTAAACCA+GGG | + | chr1.1:59433015-59433034 | MS.gene74919:CDS | 45.0% | |
| GTGCTAACACTGTGTTTCGT+GGG | + | chr1.1:59429300-59429319 | MS.gene74919:intron | 45.0% | |
| TAACACTGTGTTTCGTGGGA+GGG | + | chr1.1:59429304-59429323 | MS.gene74919:intron | 45.0% | |
| TAGGCAGGAAGATATTGTCC+TGG | - | chr1.1:59428592-59428611 | None:intergenic | 45.0% | |
| TAGTTGACCATGGATGCAGA+AGG | - | chr1.1:59430735-59430754 | None:intergenic | 45.0% | |
| TCAACATGAGCTTGCGGTTT+GGG | - | chr1.1:59429084-59429103 | None:intergenic | 45.0% | |
| TCGCAAAGCAAACCTGTATC+AGG | - | chr1.1:59432355-59432374 | None:intergenic | 45.0% | |
| TGCAGTGATTAAGCCCATGT+TGG | + | chr1.1:59429035-59429054 | MS.gene74919:intron | 45.0% | |
| TGCTGAAGTGAAATAGCCGA+GGG | - | chr1.1:59428752-59428771 | None:intergenic | 45.0% | |
| TGCTTTAGCCAGTTAAGCCA+GGG | + | chr1.1:59430630-59430649 | MS.gene74919:intron | 45.0% | |
| TGGGTGATTATGTGGATCGA+GGG | + | chr1.1:59432035-59432054 | MS.gene74919:CDS | 45.0% | |
| TGTGCTAACACTGTGTTTCG+TGG | + | chr1.1:59429299-59429318 | MS.gene74919:intron | 45.0% | |
| TGTTGCCAACTAATGACCCA+AGG | + | chr1.1:59429825-59429844 | MS.gene74919:intron | 45.0% | |
| TTCTGCATCCATGGTCAACT+AGG | + | chr1.1:59430734-59430753 | MS.gene74919:intron | 45.0% | |
| TTGAGTTTGTGGGAGCTGTA+GGG | + | chr1.1:59429456-59429475 | MS.gene74919:intron | 45.0% | |
| TTGCTTCAATTGCCTACCTG+TGG | + | chr1.1:59432228-59432247 | MS.gene74919:CDS | 45.0% | |
| TTGGGTGATTATGTGGATCG+AGG | + | chr1.1:59432034-59432053 | MS.gene74919:CDS | 45.0% | |
| TTTCGGCGCCTAATTACTGT+GGG | + | chr1.1:59432889-59432908 | MS.gene74919:CDS | 45.0% | |
| ! | AGGGTTGGCATTGAACAACT+GGG | + | chr1.1:59430649-59430668 | MS.gene74919:intron | 45.0% |
| ! | CCGATTTGAGGCACAAAGAT+TGG | - | chr1.1:59429139-59429158 | None:intergenic | 45.0% |
| ! | CTAAAGACGGGGATTAGTGA+GGG | - | chr1.1:59428793-59428812 | None:intergenic | 45.0% |
| ! | CTTTTTCTCTCTGTCTGGCT+TGG | + | chr1.1:59433135-59433154 | MS.gene74919:intron | 45.0% |
| ! | GAAGGCATGAAAAGGGCAAA+AGG | - | chr1.1:59429925-59429944 | None:intergenic | 45.0% |
| ! | TAACGAGTGAAGCTCCGTTT+TGG | + | chr1.1:59431201-59431220 | MS.gene74919:intron | 45.0% |
| ! | TCTAAAGACGGGGATTAGTG+AGG | - | chr1.1:59428794-59428813 | None:intergenic | 45.0% |
| ! | TCTTATTTGCCGTGCTCATC+AGG | + | chr1.1:59432492-59432511 | MS.gene74919:CDS | 45.0% |
| ! | TTTTCGGCGCCTAATTACTG+TGG | + | chr1.1:59432888-59432907 | MS.gene74919:CDS | 45.0% |
| !! | AAGGAGGAAGCTCTAAAGAC+GGG | - | chr1.1:59428805-59428824 | None:intergenic | 45.0% |
| !! | CTCTCTTTACCACCGATTTG+AGG | - | chr1.1:59429151-59429170 | None:intergenic | 45.0% |
| !! | GTCGTGCAAGAAAGCATTTG+GGG | + | chr1.1:59433439-59433458 | MS.gene74919:intron | 45.0% |
| !! | TAGTGGTTCTGATGTCAGAG+TGG | - | chr1.1:59428708-59428727 | None:intergenic | 45.0% |
| AAGACGGCATTGCCAACTCA+CGG | - | chr1.1:59433111-59433130 | None:intergenic | 50.0% | |
| AATGCCAACCCTGGCTTAAC+TGG | - | chr1.1:59430641-59430660 | None:intergenic | 50.0% | |
| ACAGCCGCTATTGACAACTG+AGG | - | chr1.1:59428215-59428234 | None:intergenic | 50.0% | |
| ATAATGCACAGCCCCCAATC+GGG | - | chr1.1:59429263-59429282 | None:intergenic | 50.0% | |
| ATGAGGGAAGGTCATGGAAG+AGG | - | chr1.1:59428940-59428959 | None:intergenic | 50.0% | |
| ATGCATTTCTCCCCGTGTGA+TGG | - | chr1.1:59428168-59428187 | None:intergenic | 50.0% | |
| CACACGGGGAGAAATGCATT+GGG | + | chr1.1:59428169-59428188 | MS.gene74919:intron | 50.0% | |
| CAGAACCTCCATGTCCATAC+AGG | - | chr1.1:59430168-59430187 | None:intergenic | 50.0% | |
| CAGTTGTTCAATGCCAACCC+TGG | - | chr1.1:59430650-59430669 | None:intergenic | 50.0% | |
| CATGTTTATCCCCGTGATGG+TGG | - | chr1.1:59428302-59428321 | None:intergenic | 50.0% | |
| CCAAAACAATGCCGTGCACA+AGG | - | chr1.1:59431775-59431794 | None:intergenic | 50.0% | |
| CCTGTATCAGGCACATCAGT+CGG | - | chr1.1:59432343-59432362 | None:intergenic | 50.0% | |
| CGTGTATCAGCCCTGCTTTA+GGG | - | chr1.1:59428364-59428383 | None:intergenic | 50.0% | |
| CTAACACTGTGTTTCGTGGG+AGG | + | chr1.1:59429303-59429322 | MS.gene74919:intron | 50.0% | |
| CTACAGACGCTATACCCATC+CGG | - | chr1.1:59428276-59428295 | None:intergenic | 50.0% | |
| CTGCTGAAGTGAAATAGCCG+AGG | - | chr1.1:59428753-59428772 | None:intergenic | 50.0% | |
| CTTCCTACCTTTACACCTGC+TGG | - | chr1.1:59433047-59433066 | None:intergenic | 50.0% | |
| CTTGAGTTTGTGGGAGCTGT+AGG | + | chr1.1:59429455-59429474 | MS.gene74919:intron | 50.0% | |
| GAACTCTCCAGCAGGTGTAA+AGG | + | chr1.1:59433037-59433056 | MS.gene74919:CDS | 50.0% | |
| GACCAGATACTGTTGTGGCA+TGG | + | chr1.1:59429859-59429878 | MS.gene74919:intron | 50.0% | |
| GATAATGCACAGCCCCCAAT+CGG | - | chr1.1:59429264-59429283 | None:intergenic | 50.0% | |
| GATGGGTATAGCGTCTGTAG+CGG | + | chr1.1:59428276-59428295 | MS.gene74919:intron | 50.0% | |
| GCTGAGGGGCAGTTAAAATG+AGG | - | chr1.1:59428957-59428976 | None:intergenic | 50.0% | |
| GGAATCCTTCAGGCTGAGTT+TGG | - | chr1.1:59429430-59429449 | None:intergenic | 50.0% | |
| GGGGCAGTTAAAATGAGGGA+AGG | - | chr1.1:59428952-59428971 | None:intergenic | 50.0% | |
| GGTTGGGGAATGAATGACAG+GGG | + | chr1.1:59432409-59432428 | MS.gene74919:CDS | 50.0% | |
| GTTTGCTTTGCGATCTCCTC+TGG | + | chr1.1:59432362-59432381 | MS.gene74919:CDS | 50.0% | |
| TCACACGGGGAGAAATGCAT+TGG | + | chr1.1:59428168-59428187 | MS.gene74919:intron | 50.0% | |
| TCGTGTATCAGCCCTGCTTT+AGG | - | chr1.1:59428365-59428384 | None:intergenic | 50.0% | |
| TCTCCAGCAGGTGTAAAGGT+AGG | + | chr1.1:59433041-59433060 | MS.gene74919:intron | 50.0% | |
| TGAAGTGAAATAGCCGAGGG+AGG | - | chr1.1:59428749-59428768 | None:intergenic | 50.0% | |
| TGCCATGCCACAACAGTATC+TGG | - | chr1.1:59429864-59429883 | None:intergenic | 50.0% | |
| TTAGCCAGTTAAGCCAGGGT+TGG | + | chr1.1:59430634-59430653 | MS.gene74919:intron | 50.0% | |
| TTCGGCGCCTAATTACTGTG+GGG | + | chr1.1:59432890-59432909 | MS.gene74919:CDS | 50.0% | |
| TTGAAGTTCGTAGCCGTCCA+GGG | + | chr1.1:59427606-59427625 | MS.gene74919:CDS | 50.0% | |
| TTGTCAATAGCGGCTGTGAG+CGG | + | chr1.1:59428218-59428237 | MS.gene74919:intron | 50.0% | |
| TTTGTGGGAGCTGTAGGGTT+GGG | + | chr1.1:59429461-59429480 | MS.gene74919:intron | 50.0% | |
| ! | AACAAGTAGTTGGCCTGAGG+AGG | - | chr1.1:59432013-59432032 | None:intergenic | 50.0% |
| ! | ATGTCGGCAGATGGCATTGA+AGG | - | chr1.1:59430863-59430882 | None:intergenic | 50.0% |
| ! | CAGGGTTGGCATTGAACAAC+TGG | + | chr1.1:59430648-59430667 | MS.gene74919:intron | 50.0% |
| ! | CCTTGTGCACGGCATTGTTT+TGG | + | chr1.1:59431772-59431791 | MS.gene74919:intron | 50.0% |
| ! | GTTCCGGTTTTCTACCTCAC+AGG | + | chr1.1:59430113-59430132 | MS.gene74919:intron | 50.0% |
| !! | AGGAGGAAGCTCTAAAGACG+GGG | - | chr1.1:59428804-59428823 | None:intergenic | 50.0% |
| !! | ATCTTTTGACCAGGTGGTGG+AGG | + | chr1.1:59432824-59432843 | MS.gene74919:intron | 50.0% |
| !! | GGGTGATGACTTGGTGATTG+AGG | + | chr1.1:59431116-59431135 | MS.gene74919:intron | 50.0% |
| !! | GTATGGTGGATTACCTCCTC+AGG | + | chr1.1:59431997-59432016 | MS.gene74919:CDS | 50.0% |
| !! | TCTGCAGTCTTGAGTGCTGA+GGG | - | chr1.1:59428972-59428991 | None:intergenic | 50.0% |
| AAACCAGGGAACTCTCCAGC+AGG | + | chr1.1:59433029-59433048 | MS.gene74919:CDS | 55.0% | |
| AAGACTGCAGAGCCAAGCCA+TGG | + | chr1.1:59428981-59429000 | MS.gene74919:intron | 55.0% | |
| ACGCATTGGAGTGTACCGGA+CGG | + | chr1.1:59428121-59428140 | MS.gene74919:intron | 55.0% | |
| AGGGAAGCAGGTTCAGCTGT+CGG | + | chr1.1:59427625-59427644 | MS.gene74919:CDS | 55.0% | |
| AGTGAAATAGCCGAGGGAGG+AGG | - | chr1.1:59428746-59428765 | None:intergenic | 55.0% | |
| ATCCGAGTGTAGAGTCGACC+TGG | + | chr1.1:59431468-59431487 | MS.gene74919:intron | 55.0% | |
| CATATCCATCCTCCACCACC+TGG | - | chr1.1:59432836-59432855 | None:intergenic | 55.0% | |
| CATGTTGGGTTTCGTGGTGG+AGG | + | chr1.1:59428318-59428337 | MS.gene74919:intron | 55.0% | |
| CATTTCTCCCCGTGTGATGG+TGG | - | chr1.1:59428165-59428184 | None:intergenic | 55.0% | |
| CCAGACGCATTGGAGTGTAC+CGG | + | chr1.1:59428117-59428136 | MS.gene74919:intron | 55.0% | |
| CCCCCAATCGGGACAGAAAA+CGG | - | chr1.1:59429252-59429271 | None:intergenic | 55.0% | |
| CCGACTGATGTGCCTGATAC+AGG | + | chr1.1:59432340-59432359 | MS.gene74919:CDS | 55.0% | |
| CGGTACACTCCAATGCGTCT+GGG | - | chr1.1:59428119-59428138 | None:intergenic | 55.0% | |
| CGTTGACAACCTCCATGGCT+TGG | - | chr1.1:59428996-59429015 | None:intergenic | 55.0% | |
| CTACAGACGCTATACCCGTC+CGG | - | chr1.1:59428139-59428158 | None:intergenic | 55.0% | |
| CTGGACGGCTACGAACTTCA+AGG | - | chr1.1:59427607-59427626 | None:intergenic | 55.0% | |
| CTGTCACATTTGGGCCTGTG+AGG | - | chr1.1:59430130-59430149 | None:intergenic | 55.0% | |
| CTTGAAGTTCGTAGCCGTCC+AGG | + | chr1.1:59427605-59427624 | MS.gene74919:CDS | 55.0% | |
| CTTTGCTAGGGTCTGACCAG+AGG | - | chr1.1:59432381-59432400 | None:intergenic | 55.0% | |
| GACGGGTATAGCGTCTGTAG+CGG | + | chr1.1:59428139-59428158 | MS.gene74919:intron | 55.0% | |
| GGGCCTGTGAGGTAGAAAAC+CGG | - | chr1.1:59430119-59430138 | None:intergenic | 55.0% | |
| GGTACACTCCAATGCGTCTG+GGG | - | chr1.1:59428118-59428137 | None:intergenic | 55.0% | |
| GTACACTCCAATGCGTCTGG+GGG | - | chr1.1:59428117-59428136 | None:intergenic | 55.0% | |
| GTACAGGCCCTGTATGGACA+TGG | + | chr1.1:59430157-59430176 | MS.gene74919:intron | 55.0% | |
| GTGAAATAGCCGAGGGAGGA+GGG | - | chr1.1:59428745-59428764 | None:intergenic | 55.0% | |
| GTTTGTGGGAGCTGTAGGGT+TGG | + | chr1.1:59429460-59429479 | MS.gene74919:intron | 55.0% | |
| TACTCTTCACCAAGCCCCGT+TGG | - | chr1.1:59431607-59431626 | None:intergenic | 55.0% | |
| TCATCAATGAGGGCTGCCAC+AGG | - | chr1.1:59432247-59432266 | None:intergenic | 55.0% | |
| TCCGAGTGTAGAGTCGACCT+GGG | + | chr1.1:59431469-59431488 | MS.gene74919:intron | 55.0% | |
| TGATCAAGACCAACGGGGCT+TGG | + | chr1.1:59431595-59431614 | MS.gene74919:intron | 55.0% | |
| TGTGGGGAGTTTGACAACGC+TGG | + | chr1.1:59432906-59432925 | MS.gene74919:CDS | 55.0% | |
| TTGTGGGAGCTGTAGGGTTG+GGG | + | chr1.1:59429462-59429481 | MS.gene74919:intron | 55.0% | |
| ! | ACCCAGGTCGACTCTACACT+CGG | - | chr1.1:59431473-59431492 | None:intergenic | 55.0% |
| ! | ACGGGGATTAGTGAGGGAGA+CGG | - | chr1.1:59428787-59428806 | None:intergenic | 55.0% |
| ! | CCGTTTTCTGTCCCGATTGG+GGG | + | chr1.1:59429249-59429268 | MS.gene74919:intron | 55.0% |
| ! | CTCTGCAGTCTTGAGTGCTG+AGG | - | chr1.1:59428973-59428992 | None:intergenic | 55.0% |
| !! | ACGCCGTTTTCTGTCCCGAT+TGG | + | chr1.1:59429246-59429265 | MS.gene74919:intron | 55.0% |
| !! | CAGCCCTGCTTTAGGGTTTG+CGG | - | chr1.1:59428357-59428376 | None:intergenic | 55.0% |
| !! | CGCCGTTTTCTGTCCCGATT+GGG | + | chr1.1:59429247-59429266 | MS.gene74919:intron | 55.0% |
| !! | CTGCAGTCTTGAGTGCTGAG+GGG | - | chr1.1:59428971-59428990 | None:intergenic | 55.0% |
| !! | GCCGTTTTCTGTCCCGATTG+GGG | + | chr1.1:59429248-59429267 | MS.gene74919:intron | 55.0% |
| !! | GTTGGCGTTGACAACCTCCA+TGG | - | chr1.1:59429001-59429020 | None:intergenic | 55.0% |
| !! | TTTGACCAGGTGGTGGAGGA+TGG | + | chr1.1:59432828-59432847 | MS.gene74919:intron | 55.0% |
| ACACCTGCTGGAGAGTTCCC+TGG | - | chr1.1:59433035-59433054 | None:intergenic | 60.0% | |
| ACGCGTTGGAGTGTACCGGA+TGG | + | chr1.1:59428258-59428277 | MS.gene74919:intron | 60.0% | |
| ACTGCAGAGCCAAGCCATGG+AGG | + | chr1.1:59428984-59429003 | MS.gene74919:intron | 60.0% | |
| AGTGAGGGAGACGGAGGTGA+AGG | - | chr1.1:59428778-59428797 | None:intergenic | 60.0% | |
| CAATGAGGGCTGCCACAGGT+AGG | - | chr1.1:59432243-59432262 | None:intergenic | 60.0% | |
| CAGGCCCTGTATGGACATGG+AGG | + | chr1.1:59430160-59430179 | MS.gene74919:intron | 60.0% | |
| CCAGACGCGTTGGAGTGTAC+CGG | + | chr1.1:59428254-59428273 | MS.gene74919:intron | 60.0% | |
| CCGGTACACTCCAATGCGTC+TGG | - | chr1.1:59428120-59428139 | None:intergenic | 60.0% | |
| CGCATTGGAGTGTACCGGAC+GGG | + | chr1.1:59428122-59428141 | MS.gene74919:intron | 60.0% | |
| CGCGTTGGAGTGTACCGGAT+GGG | + | chr1.1:59428259-59428278 | MS.gene74919:intron | 60.0% | |
| CGGCCGCAAACCCTAAAGCA+GGG | + | chr1.1:59428351-59428370 | MS.gene74919:intron | 60.0% | |
| CGGTACACTCCAACGCGTCT+GGG | - | chr1.1:59428256-59428275 | None:intergenic | 60.0% | |
| CTGTAGCGGCCACCATCACA+CGG | + | chr1.1:59428153-59428172 | MS.gene74919:intron | 60.0% | |
| GACAGCTGAACCTGCTTCCC+TGG | - | chr1.1:59427626-59427645 | None:intergenic | 60.0% | |
| GCACATCAGTCGGCCTCTGT+AGG | - | chr1.1:59432333-59432352 | None:intergenic | 60.0% | |
| GCAGGTTCAGCTGTCGGAGA+CGG | + | chr1.1:59427631-59427650 | MS.gene74919:CDS | 60.0% | |
| GCTGAACCTGCTTCCCTGGA+CGG | - | chr1.1:59427622-59427641 | None:intergenic | 60.0% | |
| GGTACACTCCAACGCGTCTG+GGG | - | chr1.1:59428255-59428274 | None:intergenic | 60.0% | |
| GTACACTCCAACGCGTCTGG+GGG | - | chr1.1:59428254-59428273 | None:intergenic | 60.0% | |
| GTCTGTAGCGGCCACCATCA+CGG | + | chr1.1:59428151-59428170 | MS.gene74919:intron | 60.0% | |
| TCAATAGCGGCTGTGAGCGG+TGG | + | chr1.1:59428221-59428240 | MS.gene74919:intron | 60.0% | |
| TCTGTAGCGGCCACCATCAC+GGG | + | chr1.1:59428152-59428171 | MS.gene74919:intron | 60.0% | |
| TGTAGCGGCCACCATCACAC+GGG | + | chr1.1:59428154-59428173 | MS.gene74919:intron | 60.0% | |
| TGTGGGAGCTGTAGGGTTGG+GGG | + | chr1.1:59429463-59429482 | MS.gene74919:intron | 60.0% | |
| ! | GGGATTAGTGAGGGAGACGG+AGG | - | chr1.1:59428784-59428803 | None:intergenic | 60.0% |
| ! | GGGTGTCACAGCAGCAGTAG+TGG | - | chr1.1:59428725-59428744 | None:intergenic | 60.0% |
| ! | GTTGGGTTTCGTGGTGGAGG+CGG | + | chr1.1:59428321-59428340 | MS.gene74919:intron | 60.0% |
| CACTCCAATGCGTCTGGGGG+CGG | - | chr1.1:59428114-59428133 | None:intergenic | 65.0% | |
| CCGGTACACTCCAACGCGTC+TGG | - | chr1.1:59428257-59428276 | None:intergenic | 65.0% | |
| CGGCGTCGCAGTTGCTGAGA+TGG | - | chr1.1:59429232-59429251 | None:intergenic | 65.0% | |
| CTGTAGCGGCCACCATCACG+GGG | + | chr1.1:59428290-59428309 | MS.gene74919:intron | 65.0% | |
| GCGGCCGCAAACCCTAAAGC+AGG | + | chr1.1:59428350-59428369 | MS.gene74919:intron | 65.0% | |
| GCTGTGACACCCTCCTCCCT+CGG | + | chr1.1:59428733-59428752 | MS.gene74919:intron | 65.0% | |
| GTAGCGGCCACCATCACACG+GGG | + | chr1.1:59428155-59428174 | MS.gene74919:intron | 65.0% | |
| TAGTCCACCCCCAGACGCGT+TGG | + | chr1.1:59428244-59428263 | MS.gene74919:intron | 65.0% | |
| TAGTCCGCCCCCAGACGCAT+TGG | + | chr1.1:59428107-59428126 | MS.gene74919:intron | 65.0% | |
| TCGTAGCCGTCCAGGGAAGC+AGG | + | chr1.1:59427613-59427632 | MS.gene74919:CDS | 65.0% | |
| ! | TTCGTGGTGGAGGCGGAGCA+AGG | + | chr1.1:59428328-59428347 | MS.gene74919:intron | 65.0% |
| CACTCCAACGCGTCTGGGGG+TGG | - | chr1.1:59428251-59428270 | None:intergenic | 70.0% | |
| ! | GTGGTGGAGGCGGAGCAAGG+CGG | + | chr1.1:59428331-59428350 | MS.gene74919:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 59427566 | 59433511 | 59427566 | ID=MS.gene74919 |
| chr1.1 | mRNA | 59427566 | 59433511 | 59427566 | ID=MS.gene74919.t1;Parent=MS.gene74919 |
| chr1.1 | exon | 59427566 | 59427740 | 59427566 | ID=MS.gene74919.t1.exon1;Parent=MS.gene74919.t1 |
| chr1.1 | CDS | 59427566 | 59427740 | 59427566 | ID=cds.MS.gene74919.t1;Parent=MS.gene74919.t1 |
| chr1.1 | exon | 59431954 | 59432513 | 59431954 | ID=MS.gene74919.t1.exon2;Parent=MS.gene74919.t1 |
| chr1.1 | CDS | 59431954 | 59432513 | 59431954 | ID=cds.MS.gene74919.t1;Parent=MS.gene74919.t1 |
| chr1.1 | exon | 59432837 | 59433058 | 59432837 | ID=MS.gene74919.t1.exon3;Parent=MS.gene74919.t1 |
| chr1.1 | CDS | 59432837 | 59433058 | 59432837 | ID=cds.MS.gene74919.t1;Parent=MS.gene74919.t1 |
| chr1.1 | exon | 59433440 | 59433511 | 59433440 | ID=MS.gene74919.t1.exon4;Parent=MS.gene74919.t1 |
| chr1.1 | CDS | 59433440 | 59433511 | 59433440 | ID=cds.MS.gene74919.t1;Parent=MS.gene74919.t1 |
| Gene Sequence |
| Protein sequence |
