Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79605.t1 | XP_003621181.1 | 100 | 120 | 0 | 0 | 1 | 120 | 1 | 120 | 4.60E-57 | 230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79605.t1 | P40590 | 98.3 | 120 | 2 | 0 | 1 | 120 | 1 | 120 | 2.1e-58 | 226.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79605.t1 | Q2HVS3 | 100.0 | 120 | 0 | 0 | 1 | 120 | 1 | 120 | 3.3e-57 | 230.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049140 | MS.gene79605 | 0.832397 | 9.68E-56 | -1.69E-46 |
| MS.gene050114 | MS.gene79605 | 0.832599 | 8.62E-56 | -1.69E-46 |
| MS.gene050277 | MS.gene79605 | 0.84401 | 9.85E-59 | -1.69E-46 |
| MS.gene050317 | MS.gene79605 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene050320 | MS.gene79605 | 0.841406 | 4.84E-58 | -1.69E-46 |
| MS.gene050838 | MS.gene79605 | 0.856324 | 3.48E-62 | -1.69E-46 |
| MS.gene051003 | MS.gene79605 | 0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene051063 | MS.gene79605 | 0.844001 | 9.90E-59 | -1.69E-46 |
| MS.gene051245 | MS.gene79605 | 0.820618 | 6.24E-53 | -1.69E-46 |
| MS.gene051451 | MS.gene79605 | 0.822393 | 2.43E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene79605 | 0.89541 | 9.85E-76 | -1.69E-46 |
| MS.gene051748 | MS.gene79605 | 0.893628 | 5.27E-75 | -1.69E-46 |
| MS.gene051756 | MS.gene79605 | 0.8682 | 7.79E-66 | -1.69E-46 |
| MS.gene051757 | MS.gene79605 | 0.805279 | 1.44E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene79605 | 0.827611 | 1.42E-54 | -1.69E-46 |
| MS.gene05188 | MS.gene79605 | 0.806752 | 7.06E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene79605 | 0.874609 | 5.91E-68 | -1.69E-46 |
| MS.gene052296 | MS.gene79605 | 0.801358 | 9.35E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene79605 | 0.850606 | 1.52E-60 | -1.69E-46 |
| MS.gene053109 | MS.gene79605 | 0.865316 | 6.45E-65 | -1.69E-46 |
| MS.gene053381 | MS.gene79605 | 0.828554 | 8.43E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene79605 | 0.833313 | 5.73E-56 | -1.69E-46 |
| MS.gene05469 | MS.gene79605 | 0.812447 | 4.22E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene79605 | 0.802374 | 5.78E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene79605 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene79605 | 0.812121 | 4.97E-51 | -1.69E-46 |
| MS.gene056075 | MS.gene79605 | 0.817498 | 3.20E-52 | -1.69E-46 |
| MS.gene056432 | MS.gene79605 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene79605 | 0.842807 | 2.06E-58 | -1.69E-46 |
| MS.gene056752 | MS.gene79605 | 0.813974 | 1.95E-51 | -1.69E-46 |
| MS.gene056896 | MS.gene79605 | 0.81407 | 1.86E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene79605 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene057057 | MS.gene79605 | 0.841409 | 4.84E-58 | -1.69E-46 |
| MS.gene057094 | MS.gene79605 | 0.900478 | 7.04E-78 | -1.69E-46 |
| MS.gene057234 | MS.gene79605 | 0.851807 | 6.98E-61 | -1.69E-46 |
| MS.gene057452 | MS.gene79605 | -0.803228 | 3.85E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene79605 | 0.836364 | 9.77E-57 | -1.69E-46 |
| MS.gene058055 | MS.gene79605 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene058238 | MS.gene79605 | 0.857982 | 1.13E-62 | -1.69E-46 |
| MS.gene058654 | MS.gene79605 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene79605 | 0.83905 | 2.00E-57 | -1.69E-46 |
| MS.gene059171 | MS.gene79605 | 0.825737 | 3.98E-54 | -1.69E-46 |
| MS.gene059898 | MS.gene79605 | 0.815379 | 9.53E-52 | -1.69E-46 |
| MS.gene06001 | MS.gene79605 | 0.878933 | 1.88E-69 | -1.69E-46 |
| MS.gene06010 | MS.gene79605 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene79605 | 0.862409 | 5.17E-64 | -1.69E-46 |
| MS.gene060463 | MS.gene79605 | 0.850936 | 1.23E-60 | -1.69E-46 |
| MS.gene060465 | MS.gene79605 | 0.857394 | 1.68E-62 | -1.69E-46 |
| MS.gene060586 | MS.gene79605 | 0.808826 | 2.56E-50 | -1.69E-46 |
| MS.gene060702 | MS.gene79605 | 0.836377 | 9.70E-57 | -1.69E-46 |
| MS.gene060763 | MS.gene79605 | 0.836593 | 8.54E-57 | -1.69E-46 |
| MS.gene060869 | MS.gene79605 | 0.803483 | 3.41E-49 | -1.69E-46 |
| MS.gene061145 | MS.gene79605 | 0.839003 | 2.05E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79605.t1 | MTR_7g010150 | 100.000 | 120 | 0 | 0 | 1 | 120 | 1 | 120 | 4.69e-83 | 238 |
| MS.gene79605.t1 | MTR_8g467460 | 99.160 | 119 | 1 | 0 | 1 | 119 | 1 | 119 | 2.73e-81 | 234 |
| MS.gene79605.t1 | MTR_5g040570 | 96.667 | 120 | 4 | 0 | 1 | 120 | 1 | 120 | 2.85e-80 | 231 |
| MS.gene79605.t1 | MTR_7g011050 | 63.717 | 113 | 25 | 1 | 1 | 113 | 1 | 97 | 5.56e-44 | 139 |
| MS.gene79605.t1 | MTR_8g019410 | 47.863 | 117 | 23 | 2 | 4 | 119 | 47 | 126 | 1.49e-20 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79605.t1 | AT1G26880 | 90.833 | 120 | 11 | 0 | 1 | 120 | 1 | 120 | 2.57e-75 | 219 |
| MS.gene79605.t1 | AT1G69620 | 91.597 | 119 | 10 | 0 | 1 | 119 | 1 | 119 | 9.90e-75 | 217 |
| MS.gene79605.t1 | AT3G28900 | 88.333 | 120 | 14 | 0 | 1 | 120 | 1 | 120 | 4.98e-73 | 213 |
| MS.gene79605.t1 | AT1G26880 | 91.304 | 92 | 8 | 0 | 1 | 92 | 1 | 92 | 6.96e-58 | 174 |
Find 31 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACCGCCGCACTGTTAAC+AGG | 0.305052 | 7.3:+87887040 | MS.gene79605:CDS |
| TGGATCCTCTTTCCAGTAAC+AGG | 0.314412 | 7.3:-87885777 | None:intergenic |
| GGACCTAAGTGTCCTGTTAC+TGG | 0.331250 | 7.3:+87885765 | MS.gene79605:CDS |
| CGCACTGTTAACAGGGCTTA+TGG | 0.356563 | 7.3:+87887048 | MS.gene79605:CDS |
| AACACGATGCTGGTTGGATT+TGG | 0.389836 | 7.3:-87885543 | None:intergenic |
| TTAACAGTGCGGCGGTTCCT+AGG | 0.468395 | 7.3:-87887036 | None:intergenic |
| CCTTTCCCTAACAGCTCCTC+CGG | 0.470814 | 7.3:-87887082 | None:intergenic |
| TTTATCCGGAGGAGCTGTTA+GGG | 0.501294 | 7.3:+87887077 | MS.gene79605:CDS |
| TTTCCAGTAACAGGACACTT+AGG | 0.509665 | 7.3:-87885768 | None:intergenic |
| ACGATGCTGGTTGGATTTGG+TGG | 0.532546 | 7.3:-87885540 | None:intergenic |
| CATCGTGTTGTTAAGACACC+TGG | 0.536949 | 7.3:+87885557 | MS.gene79605:CDS |
| AGTGTCCTGTTACTGGAAAG+AGG | 0.543803 | 7.3:+87885772 | MS.gene79605:CDS |
| CTTAACAACACGATGCTGGT+TGG | 0.545517 | 7.3:-87885549 | None:intergenic |
| GTTACTGGAAAGAGGATCCA+AGG | 0.571456 | 7.3:+87885780 | MS.gene79605:CDS |
| ACAACTAAGAAGAGAGCTAG+TGG | 0.577057 | 7.3:+87885744 | MS.gene79605:CDS |
| GTGTCTTAACAACACGATGC+TGG | 0.578379 | 7.3:-87885553 | None:intergenic |
| TGGCATAGCTGTGTCTCCTA+CGG | 0.580308 | 7.3:-87885520 | None:intergenic |
| GCTCTTCAACAAGGAAAGCA+CGG | 0.587996 | 7.3:-87887196 | None:intergenic |
| CCGGAGGAGCTGTTAGGGAA+AGG | 0.595594 | 7.3:+87887082 | MS.gene79605:CDS |
| GAACCGCCGCACTGTTAACA+GGG | 0.611783 | 7.3:+87887041 | MS.gene79605:CDS |
| CTAGACCTCTTGTATTCAGT+AGG | 0.617053 | 7.3:-87887009 | None:intergenic |
| TTACTGGAAAGAGGATCCAA+GGG | 0.629653 | 7.3:+87885781 | MS.gene79605:CDS |
| TGAGACCTACTGAATACAAG+AGG | 0.631121 | 7.3:+87887004 | MS.gene79605:CDS |
| ACAAGAGGTCTAGATTGCCT+AGG | 0.636078 | 7.3:+87887019 | MS.gene79605:CDS |
| TATTCAGTAGGTCTCAAGTG+TGG | 0.667813 | 7.3:-87886997 | None:intergenic |
| AAGCCCTGTTAACAGTGCGG+CGG | 0.691394 | 7.3:-87887044 | None:intergenic |
| ACTGTTAACAGGGCTTATGG+AGG | 0.693206 | 7.3:+87887051 | MS.gene79605:CDS |
| TTCAGAGACTCACATACCGT+AGG | 0.721913 | 7.3:+87885504 | MS.gene79605:CDS |
| CATAAGCCCTGTTAACAGTG+CGG | 0.730145 | 7.3:-87887047 | None:intergenic |
| TACTGGAAAGAGGATCCAAG+GGG | 0.738216 | 7.3:+87885782 | MS.gene79605:CDS |
| GTATGTGAGTCTCTGAACCA+TGG | 0.739024 | 7.3:-87885498 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAATCAATTATTTG+TGG | + | chr7.3:87886068-87886087 | MS.gene79605:intron | 10.0% |
| !! | ATTTGAAAATTGAAAATATT+AGG | - | chr7.3:87886152-87886171 | None:intergenic | 10.0% |
| !!! | TTTTTTAGAAATTAATATGT+TGG | + | chr7.3:87885826-87885845 | MS.gene79605:intron | 10.0% |
| !! | TAACAAATCTTCAATAAAAA+TGG | - | chr7.3:87886482-87886501 | None:intergenic | 15.0% |
| !! | TTTGCAATTATTAATGTTAA+TGG | + | chr7.3:87886033-87886052 | MS.gene79605:intron | 15.0% |
| !!! | TTTGATTAATTTGTGAAAAT+GGG | + | chr7.3:87885686-87885705 | MS.gene79605:intron | 15.0% |
| !!! | TTTTGATTAATTTGTGAAAA+TGG | + | chr7.3:87885685-87885704 | MS.gene79605:intron | 15.0% |
| !! | GAATGAAAATTAAAAGTAGT+AGG | - | chr7.3:87886856-87886875 | None:intergenic | 20.0% |
| !!! | TTAATACTACAATTTTGTGA+GGG | - | chr7.3:87886642-87886661 | None:intergenic | 20.0% |
| !!! | TTAATATGTTGGTTATACAT+AGG | + | chr7.3:87885837-87885856 | MS.gene79605:intron | 20.0% |
| !!! | TTTAATACTACAATTTTGTG+AGG | - | chr7.3:87886643-87886662 | None:intergenic | 20.0% |
| ! | AAACTATCTCTTCTGTAATA+GGG | - | chr7.3:87886340-87886359 | None:intergenic | 25.0% |
| ! | AATGTTCTTACTTCAATGTT+GGG | + | chr7.3:87886102-87886121 | MS.gene79605:intron | 25.0% |
| ! | AGATACCCTTTCTAAATTAT+TGG | + | chr7.3:87886662-87886681 | MS.gene79605:intron | 25.0% |
| ! | AGTCACCAATAATTTAGAAA+GGG | - | chr7.3:87886670-87886689 | None:intergenic | 25.0% |
| ! | ATCTATCATGTTTCAAACAT+AGG | - | chr7.3:87886506-87886525 | None:intergenic | 25.0% |
| ! | GAAAATTAAAAGTAGTAGGT+AGG | - | chr7.3:87886852-87886871 | None:intergenic | 25.0% |
| ! | GACTTGTATTATTCATCAAT+TGG | + | chr7.3:87885953-87885972 | MS.gene79605:intron | 25.0% |
| ! | GATATATGTGAGTTTATGAT+AGG | + | chr7.3:87885931-87885950 | MS.gene79605:intron | 25.0% |
| ! | GCATCATTGAAATTATACAA+TGG | - | chr7.3:87886755-87886774 | None:intergenic | 25.0% |
| ! | TGTAAAATAGGTGGAATATT+AGG | + | chr7.3:87885998-87886017 | MS.gene79605:intron | 25.0% |
| ! | TTATCATATTTGTTCTGTTC+TGG | + | chr7.3:87886958-87886977 | MS.gene79605:intron | 25.0% |
| ! | TTGAATTCATCTATGTTAGT+TGG | - | chr7.3:87886182-87886201 | None:intergenic | 25.0% |
| ! | TTGTCTGTGTTATGTAAAAT+AGG | + | chr7.3:87885986-87886005 | MS.gene79605:intron | 25.0% |
| AAGTGTCAAGATTATATGCA+GGG | - | chr7.3:87886828-87886847 | None:intergenic | 30.0% | |
| CAAACTATCTCTTCTGTAAT+AGG | - | chr7.3:87886341-87886360 | None:intergenic | 30.0% | |
| CAACACAATATTCAATCAGA+TGG | - | chr7.3:87886310-87886329 | None:intergenic | 30.0% | |
| CAGTCACCAATAATTTAGAA+AGG | - | chr7.3:87886671-87886690 | None:intergenic | 30.0% | |
| GAATGTTCTTACTTCAATGT+TGG | + | chr7.3:87886101-87886120 | MS.gene79605:intron | 30.0% | |
| TCTGTGTTATGTAAAATAGG+TGG | + | chr7.3:87885989-87886008 | MS.gene79605:intron | 30.0% | |
| ! | AAAATTGATGATAGCGTCAA+AGG | - | chr7.3:87886552-87886571 | None:intergenic | 30.0% |
| ! | AAAGTGTCAAGATTATATGC+AGG | - | chr7.3:87886829-87886848 | None:intergenic | 30.0% |
| !!! | AAATGGGTTTGTGTTGTTTT+AGG | + | chr7.3:87885702-87885721 | MS.gene79605:intron | 30.0% |
| !!! | CTATTTTTTGCTCTTCAACA+AGG | - | chr7.3:87887208-87887227 | None:intergenic | 30.0% |
| !!! | CTTGCTTTTCTTTTGTTTTC+TGG | - | chr7.3:87887250-87887269 | None:intergenic | 30.0% |
| CAATTCTACAACATTGTGGA+AGG | + | chr7.3:87886774-87886793 | MS.gene79605:intron | 35.0% | |
| GATGCAATTCTACAACATTG+TGG | + | chr7.3:87886770-87886789 | MS.gene79605:intron | 35.0% | |
| TCATATAGATTCATACCCCT+TGG | - | chr7.3:87885800-87885819 | None:intergenic | 35.0% | |
| TGACAAAGAAGAACATTACC+AGG | - | chr7.3:87885578-87885597 | None:intergenic | 35.0% | |
| TTTGTTTGTACATGATGCTG+TGG | + | chr7.3:87885895-87885914 | MS.gene79605:intron | 35.0% | |
| ! | CAATTTTGTGAGGGACAATA+AGG | - | chr7.3:87886633-87886652 | None:intergenic | 35.0% |
| !!! | TGTTGTTTTAGGTGGAAAGT+TGG | + | chr7.3:87885713-87885732 | MS.gene79605:intron | 35.0% |
| AAACTTAGACGCTGTGTGAT+AGG | - | chr7.3:87886729-87886748 | None:intergenic | 40.0% | |
| ACAACTAAGAAGAGAGCTAG+TGG | + | chr7.3:87885744-87885763 | MS.gene79605:CDS | 40.0% | |
| ATAGCGTCAAAGGTCATAGT+TGG | - | chr7.3:87886542-87886561 | None:intergenic | 40.0% | |
| CTAGACCTCTTGTATTCAGT+AGG | - | chr7.3:87887012-87887031 | None:intergenic | 40.0% | |
| CTTCACAAACACAGCTGAAT+TGG | - | chr7.3:87886423-87886442 | None:intergenic | 40.0% | |
| TATTCAGTAGGTCTCAAGTG+TGG | - | chr7.3:87887000-87887019 | None:intergenic | 40.0% | |
| TGAGACCTACTGAATACAAG+AGG | + | chr7.3:87887004-87887023 | MS.gene79605:CDS | 40.0% | |
| TTACTGGAAAGAGGATCCAA+GGG | + | chr7.3:87885781-87885800 | MS.gene79605:CDS | 40.0% | |
| TTTCCAGTAACAGGACACTT+AGG | - | chr7.3:87885771-87885790 | None:intergenic | 40.0% | |
| TTTGTGAGGGACAATAAGGA+CGG | - | chr7.3:87886629-87886648 | None:intergenic | 40.0% | |
| !!! | GCTTATGGAGGTGTTTTATC+CGG | + | chr7.3:87887063-87887082 | MS.gene79605:CDS | 40.0% |
| !!! | TCATTGCTTTTTCTCCCTGA+TGG | + | chr7.3:87886883-87886902 | MS.gene79605:intron | 40.0% |
| !!! | TGGGTTTGTGTTGTTTTAGG+TGG | + | chr7.3:87885705-87885724 | MS.gene79605:intron | 40.0% |
| ACAAGAGGTCTAGATTGCCT+AGG | + | chr7.3:87887019-87887038 | MS.gene79605:CDS | 45.0% | |
| ACTGTTAACAGGGCTTATGG+AGG | + | chr7.3:87887051-87887070 | MS.gene79605:CDS | 45.0% | |
| AGTGCATGTCATGACCATCA+GGG | - | chr7.3:87886900-87886919 | None:intergenic | 45.0% | |
| AGTGTCCTGTTACTGGAAAG+AGG | + | chr7.3:87885772-87885791 | MS.gene79605:CDS | 45.0% | |
| CATAAGCCCTGTTAACAGTG+CGG | - | chr7.3:87887050-87887069 | None:intergenic | 45.0% | |
| CTTAACAACACGATGCTGGT+TGG | - | chr7.3:87885552-87885571 | None:intergenic | 45.0% | |
| GCTCTTCAACAAGGAAAGCA+CGG | - | chr7.3:87887199-87887218 | None:intergenic | 45.0% | |
| GTGTCTTAACAACACGATGC+TGG | - | chr7.3:87885556-87885575 | None:intergenic | 45.0% | |
| GTTACTGGAAAGAGGATCCA+AGG | + | chr7.3:87885780-87885799 | MS.gene79605:CDS | 45.0% | |
| TACTGGAAAGAGGATCCAAG+GGG | + | chr7.3:87885782-87885801 | MS.gene79605:CDS | 45.0% | |
| TGGATCCTCTTTCCAGTAAC+AGG | - | chr7.3:87885780-87885799 | None:intergenic | 45.0% | |
| TTCAGAGACTCACATACCGT+AGG | + | chr7.3:87885504-87885523 | MS.gene79605:CDS | 45.0% | |
| TTTATCCGGAGGAGCTGTTA+GGG | + | chr7.3:87887077-87887096 | MS.gene79605:CDS | 45.0% | |
| ! | AACACGATGCTGGTTGGATT+TGG | - | chr7.3:87885546-87885565 | None:intergenic | 45.0% |
| ! | CATCGTGTTGTTAAGACACC+TGG | + | chr7.3:87885557-87885576 | MS.gene79605:CDS | 45.0% |
| ! | TTTTATCCGGAGGAGCTGTT+AGG | + | chr7.3:87887076-87887095 | MS.gene79605:CDS | 45.0% |
| !!! | TATGGAGGTGTTTTATCCGG+AGG | + | chr7.3:87887066-87887085 | MS.gene79605:CDS | 45.0% |
| CGCACTGTTAACAGGGCTTA+TGG | + | chr7.3:87887048-87887067 | MS.gene79605:CDS | 50.0% | |
| GAGTGCATGTCATGACCATC+AGG | - | chr7.3:87886901-87886920 | None:intergenic | 50.0% | |
| GGACCTAAGTGTCCTGTTAC+TGG | + | chr7.3:87885765-87885784 | MS.gene79605:CDS | 50.0% | |
| GTCTCAAGTGTGGAATCTGC+AGG | - | chr7.3:87886990-87887009 | None:intergenic | 50.0% | |
| TGGCATAGCTGTGTCTCCTA+CGG | - | chr7.3:87885523-87885542 | None:intergenic | 50.0% | |
| ! | ACGATGCTGGTTGGATTTGG+TGG | - | chr7.3:87885543-87885562 | None:intergenic | 50.0% |
| AAGCCCTGTTAACAGTGCGG+CGG | - | chr7.3:87887047-87887066 | None:intergenic | 55.0% | |
| CCTTTCCCTAACAGCTCCTC+CGG | - | chr7.3:87887085-87887104 | None:intergenic | 55.0% | |
| GAACCGCCGCACTGTTAACA+GGG | + | chr7.3:87887041-87887060 | MS.gene79605:CDS | 55.0% | |
| TTAACAGTGCGGCGGTTCCT+AGG | - | chr7.3:87887039-87887058 | None:intergenic | 55.0% | |
| CCGGAGGAGCTGTTAGGGAA+AGG | + | chr7.3:87887082-87887101 | MS.gene79605:CDS | 60.0% | |
| GGAACCGCCGCACTGTTAAC+AGG | + | chr7.3:87887040-87887059 | MS.gene79605:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 87885500 | 87887283 | 87885500 | ID=MS.gene79605 |
| chr7.3 | mRNA | 87885500 | 87887283 | 87885500 | ID=MS.gene79605.t1;Parent=MS.gene79605 |
| chr7.3 | exon | 87885500 | 87885578 | 87885500 | ID=MS.gene79605.t1.exon1;Parent=MS.gene79605.t1 |
| chr7.3 | CDS | 87885500 | 87885578 | 87885500 | ID=cds.MS.gene79605.t1;Parent=MS.gene79605.t1 |
| chr7.3 | exon | 87885724 | 87885803 | 87885724 | ID=MS.gene79605.t1.exon2;Parent=MS.gene79605.t1 |
| chr7.3 | CDS | 87885724 | 87885803 | 87885724 | ID=cds.MS.gene79605.t1;Parent=MS.gene79605.t1 |
| chr7.3 | exon | 87886994 | 87887103 | 87886994 | ID=MS.gene79605.t1.exon3;Parent=MS.gene79605.t1 |
| chr7.3 | CDS | 87886994 | 87887103 | 87886994 | ID=cds.MS.gene79605.t1;Parent=MS.gene79605.t1 |
| chr7.3 | exon | 87887190 | 87887283 | 87887190 | ID=MS.gene79605.t1.exon4;Parent=MS.gene79605.t1 |
| chr7.3 | CDS | 87887190 | 87887283 | 87887190 | ID=cds.MS.gene79605.t1;Parent=MS.gene79605.t1 |
| Gene Sequence |
| Protein sequence |
