Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79683.t1 | XP_013444769.1 | 96.2 | 211 | 7 | 1 | 116 | 325 | 33 | 243 | 1.10E-113 | 419.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79683.t1 | A0A072TMS4 | 96.2 | 211 | 7 | 1 | 116 | 325 | 33 | 243 | 8.0e-114 | 419.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049153 | MS.gene79683 | 0.805576 | 1.25E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene79683 | 0.879872 | 8.74E-70 | -1.69E-46 |
| MS.gene049758 | MS.gene79683 | 0.811733 | 6.04E-51 | -1.69E-46 |
| MS.gene049910 | MS.gene79683 | 0.81215 | 4.90E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene79683 | 0.835765 | 1.39E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene79683 | 0.843766 | 1.14E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene79683 | 0.84268 | 2.23E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene79683 | -0.835923 | 1.26E-56 | -1.69E-46 |
| MS.gene050398 | MS.gene79683 | 0.827399 | 1.60E-54 | -1.69E-46 |
| MS.gene050400 | MS.gene79683 | 0.800742 | 1.25E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene79683 | -0.821225 | 4.52E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene79683 | -0.836998 | 6.73E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene79683 | 0.843793 | 1.13E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene79683 | 0.824172 | 9.32E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene79683 | 0.821266 | 4.42E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene79683 | 0.822861 | 1.89E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene79683 | 0.863847 | 1.86E-64 | -1.69E-46 |
| MS.gene052011 | MS.gene79683 | -0.848669 | 5.29E-60 | -1.69E-46 |
| MS.gene052077 | MS.gene79683 | 0.870963 | 9.81E-67 | -1.69E-46 |
| MS.gene052176 | MS.gene79683 | 0.846786 | 1.74E-59 | -1.69E-46 |
| MS.gene052340 | MS.gene79683 | 0.805706 | 1.17E-49 | -1.69E-46 |
| MS.gene052389 | MS.gene79683 | 0.868875 | 4.72E-66 | -1.69E-46 |
| MS.gene053494 | MS.gene79683 | 0.803467 | 3.44E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene79683 | 0.834455 | 2.97E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene79683 | 0.809143 | 2.19E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene79683 | 0.84272 | 2.18E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene79683 | 0.810911 | 9.11E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene79683 | 0.807971 | 3.89E-50 | -1.69E-46 |
| MS.gene054826 | MS.gene79683 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene79683 | 0.836288 | 1.02E-56 | -1.69E-46 |
| MS.gene054983 | MS.gene79683 | 0.81398 | 1.94E-51 | -1.69E-46 |
| MS.gene055217 | MS.gene79683 | 0.812928 | 3.31E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene79683 | 0.863992 | 1.67E-64 | -1.69E-46 |
| MS.gene055701 | MS.gene79683 | 0.841039 | 6.05E-58 | -1.69E-46 |
| MS.gene056087 | MS.gene79683 | 0.801482 | 8.82E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene79683 | 0.805198 | 1.50E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene79683 | 0.803557 | 3.29E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene79683 | 0.859379 | 4.31E-63 | -1.69E-46 |
| MS.gene05811 | MS.gene79683 | 0.804363 | 2.24E-49 | -1.69E-46 |
| MS.gene058139 | MS.gene79683 | 0.815307 | 9.89E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene79683 | 0.822624 | 2.14E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene79683 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene79683 | 0.805189 | 1.51E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene79683 | 0.813396 | 2.62E-51 | -1.69E-46 |
| MS.gene059247 | MS.gene79683 | 0.853433 | 2.40E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene79683 | 0.803994 | 2.67E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene79683 | 0.833867 | 4.17E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene79683 | 0.817581 | 3.06E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene79683 | 0.816405 | 5.62E-52 | -1.69E-46 |
| MS.gene060942 | MS.gene79683 | 0.823764 | 1.16E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene79683 | 0.82804 | 1.12E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene79683 | 0.831839 | 1.33E-55 | -1.69E-46 |
| MS.gene061114 | MS.gene79683 | -0.815718 | 8.01E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene79683 | 0.813184 | 2.91E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79683.t1 | MTR_8g028545 | 93.004 | 243 | 15 | 2 | 85 | 325 | 1 | 243 | 1.37e-169 | 471 |
| MS.gene79683.t1 | MTR_4g037255 | 82.558 | 86 | 10 | 1 | 85 | 165 | 1 | 86 | 3.90e-42 | 141 |
| MS.gene79683.t1 | MTR_4g037265 | 53.435 | 131 | 22 | 2 | 195 | 325 | 91 | 182 | 5.08e-34 | 123 |
| MS.gene79683.t1 | MTR_1g041830 | 80.435 | 46 | 9 | 0 | 1 | 46 | 3 | 48 | 4.15e-19 | 82.0 |
| MS.gene79683.t1 | MTR_5g064590 | 78.261 | 46 | 10 | 0 | 1 | 46 | 1 | 46 | 7.80e-19 | 85.1 |
| MS.gene79683.t1 | MTR_1g081280 | 26.267 | 217 | 152 | 4 | 97 | 306 | 17 | 232 | 1.18e-18 | 84.0 |
| MS.gene79683.t1 | MTR_6g477970 | 76.087 | 46 | 11 | 0 | 1 | 46 | 1 | 46 | 3.95e-18 | 79.7 |
| MS.gene79683.t1 | MTR_8g076180 | 76.087 | 46 | 11 | 0 | 1 | 46 | 1 | 46 | 5.80e-17 | 79.3 |
| MS.gene79683.t1 | MTR_6g011580 | 69.565 | 46 | 14 | 0 | 1 | 46 | 16 | 61 | 1.68e-15 | 72.0 |
| MS.gene79683.t1 | MTR_6g477950 | 71.739 | 46 | 13 | 0 | 1 | 46 | 180 | 225 | 2.98e-15 | 75.5 |
| MS.gene79683.t1 | MTR_5g004860 | 73.913 | 46 | 12 | 0 | 1 | 46 | 1 | 46 | 3.86e-15 | 76.3 |
| MS.gene79683.t1 | MTR_1g043690 | 75.556 | 45 | 11 | 0 | 2 | 46 | 9 | 53 | 6.04e-15 | 75.9 |
| MS.gene79683.t1 | MTR_6g037120 | 62.745 | 51 | 19 | 0 | 1 | 51 | 1 | 51 | 1.17e-14 | 69.7 |
| MS.gene79683.t1 | MTR_8g027910 | 69.565 | 46 | 14 | 0 | 1 | 46 | 11 | 56 | 1.36e-14 | 72.8 |
| MS.gene79683.t1 | MTR_0003s0290 | 69.565 | 46 | 14 | 0 | 1 | 46 | 1 | 46 | 2.20e-14 | 73.9 |
| MS.gene79683.t1 | MTR_2g450060 | 69.565 | 46 | 14 | 0 | 1 | 46 | 5 | 50 | 3.24e-14 | 73.6 |
| MS.gene79683.t1 | MTR_7g025160 | 67.391 | 46 | 15 | 0 | 1 | 46 | 11 | 56 | 3.38e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79683.t1 | AT2G46100 | 59.091 | 242 | 82 | 3 | 79 | 311 | 2 | 235 | 1.06e-101 | 299 |
| MS.gene79683.t1 | AT2G46100 | 50.279 | 179 | 72 | 3 | 79 | 248 | 2 | 172 | 3.92e-51 | 169 |
| MS.gene79683.t1 | AT3G04890 | 34.965 | 143 | 87 | 3 | 177 | 315 | 76 | 216 | 2.70e-21 | 90.9 |
| MS.gene79683.t1 | AT3G04890 | 34.965 | 143 | 87 | 3 | 177 | 315 | 80 | 220 | 2.93e-21 | 90.9 |
| MS.gene79683.t1 | AT3G04890 | 32.283 | 127 | 74 | 2 | 177 | 291 | 76 | 202 | 1.39e-15 | 75.1 |
| MS.gene79683.t1 | AT3G04890 | 32.283 | 127 | 74 | 2 | 177 | 291 | 80 | 206 | 1.44e-15 | 75.1 |
Find 73 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGGAGACCTATTCTTTC+TGG | 0.087001 | 8.4:+67261478 | MS.gene79683:CDS |
| AAAAGGAACTGCACTAATTT+TGG | 0.093922 | 8.4:+67261011 | MS.gene79683:CDS |
| GTTGCTGTGACTCTTGATTT+TGG | 0.182046 | 8.4:-67259531 | None:intergenic |
| TGTTCTCTTGTTTAGTTTCA+TGG | 0.194002 | 8.4:+67259381 | MS.gene79683:CDS |
| TTAACCCAAAGAAGGATTTC+TGG | 0.203063 | 8.4:+67257667 | MS.gene79683:CDS |
| AGCTTCCAGAAATCCTTCTT+TGG | 0.249300 | 8.4:-67257672 | None:intergenic |
| TGCATTGAATTTGAAACCTA+TGG | 0.325155 | 8.4:-67259498 | None:intergenic |
| TTGTGGTGATGATGTTGTTT+TGG | 0.338335 | 8.4:-67259463 | None:intergenic |
| ACAGAACAATGTATTTCTTA+AGG | 0.349221 | 8.4:+67259552 | MS.gene79683:CDS |
| CTTTGTTCAAGCAAATTCTA+AGG | 0.368956 | 8.4:+67261958 | MS.gene79683:CDS |
| TGGTATAGTTCTGAGCTTCT+AGG | 0.369490 | 8.4:+67259580 | MS.gene79683:CDS |
| GCAAGACCAGTTCAATTTAT+CGG | 0.369808 | 8.4:+67257639 | MS.gene79683:CDS |
| GCTGTATCTTGTCCTTTCCT+TGG | 0.372617 | 8.4:+67261461 | MS.gene79683:CDS |
| AGACAAATGGGTTGTTGTTA+AGG | 0.378712 | 8.4:+67257710 | MS.gene79683:CDS |
| CTGTGACAAAATAAGATCTT+TGG | 0.390504 | 8.4:-67259714 | None:intergenic |
| GTCGCGGTGGTCGCCGGCGA+AGG | 0.411604 | 8.4:+67258262 | MS.gene79683:CDS |
| GCTTCCAGAAATCCTTCTTT+GGG | 0.413903 | 8.4:-67257671 | None:intergenic |
| AATTGAACTGGTCTTGCCAT+TGG | 0.425041 | 8.4:-67257633 | None:intergenic |
| CCATGACAGGATAAAGGAAT+TGG | 0.428536 | 8.4:+67261424 | MS.gene79683:intron |
| ATCTGAAGCCACCAGTGTTA+TGG | 0.429337 | 8.4:-67258236 | None:intergenic |
| AAATGGGTTGTTGTTAAGGA+TGG | 0.435334 | 8.4:+67257714 | MS.gene79683:CDS |
| TTTGCTCCATGACAGGATAA+AGG | 0.440137 | 8.4:+67261418 | MS.gene79683:intron |
| CTTTCAGGCATGTGGAGCAT+TGG | 0.446746 | 8.4:+67261919 | MS.gene79683:intron |
| AAGGACTTCAACGTTTCAAA+AGG | 0.458374 | 8.4:+67260994 | MS.gene79683:CDS |
| TGAGATTTACCAGAAAGAAT+AGG | 0.461380 | 8.4:-67261487 | None:intergenic |
| GATTCCGTCGCGGTGGTCGC+CGG | 0.468443 | 8.4:+67258256 | MS.gene79683:CDS |
| GTGGTGATGGTTGTGACTAA+TGG | 0.469661 | 8.4:-67259422 | None:intergenic |
| CGGTGATATTAACCCAAAGA+AGG | 0.479855 | 8.4:+67257659 | MS.gene79683:CDS |
| TGAAGAGGATTGTGAATTTG+CGG | 0.489339 | 8.4:+67260953 | MS.gene79683:CDS |
| TAAGGATGGGAGGGAGCACT+TGG | 0.492942 | 8.4:+67257728 | MS.gene79683:CDS |
| CTGTGAGGGTGAAAGACAAA+TGG | 0.494992 | 8.4:+67257697 | MS.gene79683:CDS |
| TTTAAGCTAAATCCCTTGCT+AGG | 0.497530 | 8.4:-67261981 | None:intergenic |
| ATATCACCGATAAATTGAAC+TGG | 0.497635 | 8.4:-67257645 | None:intergenic |
| TTATAATTTACCTATTCACT+TGG | 0.507238 | 8.4:-67262033 | None:intergenic |
| AGGTTTCAAATTCAATGCAA+TGG | 0.509267 | 8.4:+67259502 | MS.gene79683:CDS |
| TGTTAGAATCTAAGAACAAA+CGG | 0.513330 | 8.4:-67259342 | None:intergenic |
| ATGTATTTCTTAAGGTTGCA+TGG | 0.514798 | 8.4:+67259560 | MS.gene79683:CDS |
| GAAGCTTCTTCTTCAACAGA+TGG | 0.522340 | 8.4:-67259628 | None:intergenic |
| GATGGTTATCGTTGATGCCA+AGG | 0.528606 | 8.4:+67257752 | MS.gene79683:CDS |
| TACAACAGAAGCACGATCAA+TGG | 0.528751 | 8.4:-67259671 | None:intergenic |
| CACAATCAGGAAAAGTATGC+AGG | 0.531502 | 8.4:+67261817 | MS.gene79683:CDS |
| CAACTATGAATCTTATGAAG+TGG | 0.531678 | 8.4:+67261051 | MS.gene79683:CDS |
| CCTGAAAACTTTCAGGCATG+TGG | 0.535655 | 8.4:+67261911 | MS.gene79683:intron |
| TGTGAATTTGCGGATCCAGC+GGG | 0.538988 | 8.4:+67260963 | MS.gene79683:CDS |
| AATGGGTTGTTGTTAAGGAT+GGG | 0.540007 | 8.4:+67257715 | MS.gene79683:CDS |
| CACATTGAATGCATATGAAG+AGG | 0.540073 | 8.4:+67260938 | MS.gene79683:CDS |
| AACTATGAATCTTATGAAGT+GGG | 0.541276 | 8.4:+67261052 | MS.gene79683:CDS |
| AGGATAAAGGAATTGGTCAC+TGG | 0.548719 | 8.4:+67261431 | MS.gene79683:intron |
| GCAAATTCTAAGGCCTAGCA+AGG | 0.551037 | 8.4:+67261968 | MS.gene79683:CDS |
| TGGGAGGGAGCACTTGGAGA+TGG | 0.552726 | 8.4:+67257734 | MS.gene79683:CDS |
| CTTCTTCAACAGATGGAGAA+CGG | 0.568481 | 8.4:-67259621 | None:intergenic |
| CCAGAAAGAATAGGTCTCCA+AGG | 0.570816 | 8.4:-67261478 | None:intergenic |
| GGTTGTTGTTAAGGATGGGA+GGG | 0.576229 | 8.4:+67257719 | MS.gene79683:CDS |
| ATGAATCGAAATACCTTCGC+CGG | 0.578909 | 8.4:-67258275 | None:intergenic |
| GGGTTGTTGTTAAGGATGGG+AGG | 0.583709 | 8.4:+67257718 | MS.gene79683:CDS |
| AAGAATAGGTCTCCAAGGAA+AGG | 0.586808 | 8.4:-67261473 | None:intergenic |
| GCTTAAAAGATTATGTGACT+AGG | 0.588291 | 8.4:+67261997 | MS.gene79683:CDS |
| AGAACAAAGAAGTGTGGTGA+TGG | 0.594904 | 8.4:-67259435 | None:intergenic |
| TTCGCCGGCGACCACCGCGA+CGG | 0.595059 | 8.4:-67258260 | None:intergenic |
| TAAAAGATTATGTGACTAGG+TGG | 0.601952 | 8.4:+67262000 | MS.gene79683:CDS |
| TGTGAGGGTGAAAGACAAAT+GGG | 0.607479 | 8.4:+67257698 | MS.gene79683:CDS |
| TTGTGAATTTGCGGATCCAG+CGG | 0.612444 | 8.4:+67260962 | MS.gene79683:CDS |
| AGTCCTTTAAAAGATCCCGC+TGG | 0.619834 | 8.4:-67260978 | None:intergenic |
| TAATATATGCTGCAGCAACT+GGG | 0.621935 | 8.4:+67261772 | MS.gene79683:intron |
| GGCTTCAGATTCCGTCGCGG+TGG | 0.635450 | 8.4:+67258249 | MS.gene79683:CDS |
| TTTGTAGACCATAACACTGG+TGG | 0.665088 | 8.4:+67258228 | MS.gene79683:intron |
| CAAATTCTAAGGCCTAGCAA+GGG | 0.670959 | 8.4:+67261969 | MS.gene79683:CDS |
| ATTTCTGGAAGCTGACTGTG+AGG | 0.675527 | 8.4:+67257682 | MS.gene79683:CDS |
| TTTCTGGAAGCTGACTGTGA+GGG | 0.678677 | 8.4:+67257683 | MS.gene79683:CDS |
| ATGGTTTGAAGAAGTCTCTG+TGG | 0.682726 | 8.4:-67259652 | None:intergenic |
| CCATTTGTAGACCATAACAC+TGG | 0.688347 | 8.4:+67258225 | MS.gene79683:intron |
| GTGCAAAGAACAAAGAAGTG+TGG | 0.724805 | 8.4:-67259441 | None:intergenic |
| GGTGGCTTCAGATTCCGTCG+CGG | 0.771606 | 8.4:+67258246 | MS.gene79683:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATAATAATTATATA+CGG | + | chr8.4:67258925-67258944 | MS.gene79683:intron | 0.0% |
| !! | TTATGTAAAATTTAAATACA+AGG | + | chr8.4:67259309-67259328 | MS.gene79683:intron | 10.0% |
| !!! | AAAAAATAATTCAGAATTTT+TGG | - | chr8.4:67258744-67258763 | None:intergenic | 10.0% |
| !!! | AAAAAATATCAATCTTTTTA+CGG | + | chr8.4:67261350-67261369 | MS.gene79683:intron | 10.0% |
| !!! | AATTTAATTTTGTTAATGAA+TGG | - | chr8.4:67261543-67261562 | None:intergenic | 10.0% |
| !! | ATAACAAATAAAAAGATCTA+CGG | + | chr8.4:67257906-67257925 | MS.gene79683:intron | 15.0% |
| !! | TAAGTCTAATTAATTATTGT+TGG | + | chr8.4:67258770-67258789 | MS.gene79683:intron | 15.0% |
| !!! | ATTCTGAATTATTTTTTGTA+AGG | + | chr8.4:67258747-67258766 | MS.gene79683:intron | 15.0% |
| !!! | GATATTTCATTTATTTGTTA+TGG | - | chr8.4:67257981-67258000 | None:intergenic | 15.0% |
| !!! | GTATTTTGATTATAATCAAA+TGG | + | chr8.4:67260874-67260893 | MS.gene79683:intron | 15.0% |
| !!! | TATAGTTTCAATTTTAAGTA+TGG | + | chr8.4:67259838-67259857 | MS.gene79683:intron | 15.0% |
| !!! | TCAAATTTGTTAGTTTAATT+AGG | - | chr8.4:67260346-67260365 | None:intergenic | 15.0% |
| !!! | TTAAAATAATTTTTGTACAC+TGG | + | chr8.4:67259054-67259073 | MS.gene79683:intron | 15.0% |
| !! | ACAATATCATAAATCTCTAA+CGG | + | chr8.4:67260418-67260437 | MS.gene79683:intron | 20.0% |
| !! | AGTATCTGTGAAATTAATTA+TGG | + | chr8.4:67258627-67258646 | MS.gene79683:intron | 20.0% |
| !! | ATGTTCAAATTAACATGAAT+CGG | + | chr8.4:67261655-67261674 | MS.gene79683:intron | 20.0% |
| !! | GTTTACAAATTTATTTGATC+TGG | + | chr8.4:67258413-67258432 | MS.gene79683:intron | 20.0% |
| !! | TGATCAGAAATAAAAGAAAT+AGG | + | chr8.4:67258096-67258115 | MS.gene79683:intron | 20.0% |
| !! | TTGACTCATAATCTTAAAAA+TGG | + | chr8.4:67258798-67258817 | MS.gene79683:intron | 20.0% |
| !!! | CTTAAAGTATTTGTAATTCA+CGG | + | chr8.4:67258994-67259013 | MS.gene79683:intron | 20.0% |
| !!! | GTAGATCTTTTTATTTGTTA+TGG | - | chr8.4:67257907-67257926 | None:intergenic | 20.0% |
| !!! | TACTACTCAATAATGTTTTA+GGG | + | chr8.4:67260706-67260725 | MS.gene79683:intron | 20.0% |
| !!! | TTAAAGTATTTGTAATTCAC+GGG | + | chr8.4:67258995-67259014 | MS.gene79683:intron | 20.0% |
| !!! | TTCTCAAAATTATTTTGTTG+AGG | + | chr8.4:67258581-67258600 | MS.gene79683:intron | 20.0% |
| !!! | TTTTGTATCAGTCATTATAT+AGG | - | chr8.4:67260823-67260842 | None:intergenic | 20.0% |
| ! | AAAAATAGATGAAGATTGTG+AGG | + | chr8.4:67258465-67258484 | MS.gene79683:intron | 25.0% |
| ! | AAAATAGATGAAGATTGTGA+GGG | + | chr8.4:67258466-67258485 | MS.gene79683:intron | 25.0% |
| ! | AACTATGAATCTTATGAAGT+GGG | + | chr8.4:67261052-67261071 | MS.gene79683:CDS | 25.0% |
| ! | ACAATAACACAAAAATCCAT+AGG | + | chr8.4:67259482-67259501 | MS.gene79683:CDS | 25.0% |
| ! | ACAGAACAATGTATTTCTTA+AGG | + | chr8.4:67259552-67259571 | MS.gene79683:CDS | 25.0% |
| ! | AGAAAACAAAGGAAACAAAT+TGG | - | chr8.4:67259780-67259799 | None:intergenic | 25.0% |
| ! | CAAAATGAAGCTAATACAAT+TGG | + | chr8.4:67260838-67260857 | MS.gene79683:intron | 25.0% |
| ! | CTCAATCTATTAGATATACA+TGG | - | chr8.4:67261520-67261539 | None:intergenic | 25.0% |
| ! | GAAAAATGAAGTGAATGATA+TGG | + | chr8.4:67258131-67258150 | MS.gene79683:intron | 25.0% |
| ! | GTAAAATTTAAATACAAGGC+AGG | + | chr8.4:67259313-67259332 | MS.gene79683:intron | 25.0% |
| ! | TAAAGATACACATAAAACCT+TGG | - | chr8.4:67257772-67257791 | None:intergenic | 25.0% |
| ! | TGCTTAAAATAGCAATACAA+AGG | + | chr8.4:67260539-67260558 | MS.gene79683:intron | 25.0% |
| ! | TGTTAAATGTAGTAAGAAGT+TGG | - | chr8.4:67260391-67260410 | None:intergenic | 25.0% |
| ! | TGTTAGAATCTAAGAACAAA+CGG | - | chr8.4:67259345-67259364 | None:intergenic | 25.0% |
| ! | TGTTCAAATTAACATGAATC+GGG | + | chr8.4:67261656-67261675 | MS.gene79683:intron | 25.0% |
| ! | TTATAATCAAATGGTTCACA+TGG | + | chr8.4:67260883-67260902 | MS.gene79683:intron | 25.0% |
| ! | TTTCAAAACATTGTCTATGT+TGG | + | chr8.4:67258357-67258376 | MS.gene79683:intron | 25.0% |
| !! | AATATAGAGTTTTGCAACTT+AGG | + | chr8.4:67261124-67261143 | MS.gene79683:intron | 25.0% |
| !! | GATTCATGATTTTCTTTGTT+TGG | + | chr8.4:67258291-67258310 | MS.gene79683:intron | 25.0% |
| !! | GTACTACTCAATAATGTTTT+AGG | + | chr8.4:67260705-67260724 | MS.gene79683:intron | 25.0% |
| !! | TTTAAAGTTCATCTTTCTCT+TGG | - | chr8.4:67260088-67260107 | None:intergenic | 25.0% |
| !!! | AGTTTAATTTTATGCAGAGA+AGG | - | chr8.4:67258074-67258093 | None:intergenic | 25.0% |
| !!! | ATTGCTATTTTAAGCACTTA+CGG | - | chr8.4:67260535-67260554 | None:intergenic | 25.0% |
| !!! | TACTATTTTGATACACAATC+AGG | + | chr8.4:67261804-67261823 | MS.gene79683:CDS | 25.0% |
| !!! | TATGGATTTTTGTGTTATTG+TGG | - | chr8.4:67259483-67259502 | None:intergenic | 25.0% |
| !!! | TGTCTTTTTTACACATCATT+TGG | + | chr8.4:67259874-67259893 | MS.gene79683:intron | 25.0% |
| AAATTTAAATACAAGGCAGG+TGG | + | chr8.4:67259316-67259335 | MS.gene79683:intron | 30.0% | |
| AAGTGAATGATATGGAAGAA+GGG | + | chr8.4:67258139-67258158 | MS.gene79683:intron | 30.0% | |
| AATTAATTATGGCAGGTGTA+AGG | + | chr8.4:67258638-67258657 | MS.gene79683:intron | 30.0% | |
| AGGTTTCAAATTCAATGCAA+TGG | + | chr8.4:67259502-67259521 | MS.gene79683:CDS | 30.0% | |
| ATATCACCGATAAATTGAAC+TGG | - | chr8.4:67257648-67257667 | None:intergenic | 30.0% | |
| ATGTATTTCTTAAGGTTGCA+TGG | + | chr8.4:67259560-67259579 | MS.gene79683:CDS | 30.0% | |
| CAACTATGAATCTTATGAAG+TGG | + | chr8.4:67261051-67261070 | MS.gene79683:CDS | 30.0% | |
| CTAAATTCCTGAAAACTTTC+AGG | + | chr8.4:67261904-67261923 | MS.gene79683:intron | 30.0% | |
| CTGTGACAAAATAAGATCTT+TGG | - | chr8.4:67259717-67259736 | None:intergenic | 30.0% | |
| CTTTGTTCAAGCAAATTCTA+AGG | + | chr8.4:67261958-67261977 | MS.gene79683:CDS | 30.0% | |
| GAACATGAACAATGTTGTTA+CGG | + | chr8.4:67258530-67258549 | MS.gene79683:intron | 30.0% | |
| GCTTAAAAGATTATGTGACT+AGG | + | chr8.4:67261997-67262016 | MS.gene79683:CDS | 30.0% | |
| GGTAAGTCTAACAATTACAA+TGG | + | chr8.4:67258830-67258849 | MS.gene79683:intron | 30.0% | |
| GTGTAATATCAAGAGTTACA+AGG | - | chr8.4:67261184-67261203 | None:intergenic | 30.0% | |
| TAAAAGATTATGTGACTAGG+TGG | + | chr8.4:67262000-67262019 | MS.gene79683:CDS | 30.0% | |
| TATGACTATTCAGAGTTGTT+AGG | + | chr8.4:67259919-67259938 | MS.gene79683:intron | 30.0% | |
| TATTTAGCAGGAACAAAAAG+CGG | + | chr8.4:67261713-67261732 | MS.gene79683:intron | 30.0% | |
| TCACAAAATGCTTATTTAGC+AGG | + | chr8.4:67261701-67261720 | MS.gene79683:intron | 30.0% | |
| TCTGTGAAATTAATTATGGC+AGG | + | chr8.4:67258631-67258650 | MS.gene79683:intron | 30.0% | |
| TCTTAAAAATGGCAAGTGTA+AGG | + | chr8.4:67258809-67258828 | MS.gene79683:intron | 30.0% | |
| TGAGATTTACCAGAAAGAAT+AGG | - | chr8.4:67261490-67261509 | None:intergenic | 30.0% | |
| TTTAGCAACTCTATTCCTTT+AGG | - | chr8.4:67261299-67261318 | None:intergenic | 30.0% | |
| ! | AAAAGGAACTGCACTAATTT+TGG | + | chr8.4:67261011-67261030 | MS.gene79683:CDS | 30.0% |
| ! | TGCATTGAATTTGAAACCTA+TGG | - | chr8.4:67259501-67259520 | None:intergenic | 30.0% |
| ! | TGTTCTCTTGTTTAGTTTCA+TGG | + | chr8.4:67259381-67259400 | MS.gene79683:CDS | 30.0% |
| !! | ATGGGTTGATGTATTAATCA+AGG | - | chr8.4:67258209-67258228 | None:intergenic | 30.0% |
| !! | GATGATTGATTTGTGGAAAA+AGG | + | chr8.4:67259896-67259915 | MS.gene79683:intron | 30.0% |
| !! | GTATCTTTTACTTTTGAACC+AGG | + | chr8.4:67260650-67260669 | MS.gene79683:intron | 30.0% |
| !! | TCATTTGGATGATTGATTTG+TGG | + | chr8.4:67259889-67259908 | MS.gene79683:intron | 30.0% |
| !!! | CAAAGATCTTATTTTGTCAC+AGG | + | chr8.4:67259715-67259734 | MS.gene79683:CDS | 30.0% |
| !!! | CTCAATAATGTTTTAGGGAT+TGG | + | chr8.4:67260711-67260730 | MS.gene79683:intron | 30.0% |
| !!! | TAGGTTTTAAGTTGTAGTTG+CGG | + | chr8.4:67261143-67261162 | MS.gene79683:intron | 30.0% |
| !!! | TGCTTTTTCTTGTCTTATGT+TGG | + | chr8.4:67259748-67259767 | MS.gene79683:intron | 30.0% |
| AACAGCTGAGCATTTATTCT+GGG | - | chr8.4:67258026-67258045 | None:intergenic | 35.0% | |
| AAGGACTTCAACGTTTCAAA+AGG | + | chr8.4:67260994-67261013 | MS.gene79683:CDS | 35.0% | |
| AATCCAAACGCAGAAAACAA+AGG | - | chr8.4:67259791-67259810 | None:intergenic | 35.0% | |
| ACTCGTAGTTACTGATAAGT+GGG | + | chr8.4:67259949-67259968 | MS.gene79683:intron | 35.0% | |
| AGTCTAACAATTACAATGGC+AGG | + | chr8.4:67258834-67258853 | MS.gene79683:intron | 35.0% | |
| CACATTGAATGCATATGAAG+AGG | + | chr8.4:67260938-67260957 | MS.gene79683:CDS | 35.0% | |
| CAGTGTTATGGTCTACAAAT+GGG | - | chr8.4:67258227-67258246 | None:intergenic | 35.0% | |
| GAAGTGAATGATATGGAAGA+AGG | + | chr8.4:67258138-67258157 | MS.gene79683:intron | 35.0% | |
| GAGAAGGCAATTTCGAATTT+CGG | - | chr8.4:67258058-67258077 | None:intergenic | 35.0% | |
| GATGATAAAGGTTTCTGATG+CGG | + | chr8.4:67261210-67261229 | MS.gene79683:intron | 35.0% | |
| GCAACAACAACAGAAAACAA+AGG | - | chr8.4:67260233-67260252 | None:intergenic | 35.0% | |
| GCAAGACCAGTTCAATTTAT+CGG | + | chr8.4:67257639-67257658 | MS.gene79683:CDS | 35.0% | |
| TAACAGCTGAGCATTTATTC+TGG | - | chr8.4:67258027-67258046 | None:intergenic | 35.0% | |
| TAATATATGCTGCAGCAACT+GGG | + | chr8.4:67261772-67261791 | MS.gene79683:intron | 35.0% | |
| TCAGGAGCAATGTTGTAATA+TGG | + | chr8.4:67260470-67260489 | MS.gene79683:intron | 35.0% | |
| TCTGCGTTTGGATTTAGATT+TGG | + | chr8.4:67259797-67259816 | MS.gene79683:intron | 35.0% | |
| TGAAGAGGATTGTGAATTTG+CGG | + | chr8.4:67260953-67260972 | MS.gene79683:CDS | 35.0% | |
| TGCTGCAGCATATATTAACA+TGG | - | chr8.4:67261769-67261788 | None:intergenic | 35.0% | |
| TTAACCCAAAGAAGGATTTC+TGG | + | chr8.4:67257667-67257686 | MS.gene79683:CDS | 35.0% | |
| TTAATATATGCTGCAGCAAC+TGG | + | chr8.4:67261771-67261790 | MS.gene79683:intron | 35.0% | |
| TTACACGCAACTGATGATAA+AGG | + | chr8.4:67261198-67261217 | MS.gene79683:intron | 35.0% | |
| TTTAAGCTAAATCCCTTGCT+AGG | - | chr8.4:67261984-67262003 | None:intergenic | 35.0% | |
| ! | AACGTTTGTTGGGTTATGAT+TGG | + | chr8.4:67259989-67260008 | MS.gene79683:intron | 35.0% |
| ! | ACGTTTGTTGGGTTATGATT+GGG | + | chr8.4:67259990-67260009 | MS.gene79683:intron | 35.0% |
| ! | AGACAAGAAAAAGCATGTGA+TGG | - | chr8.4:67259743-67259762 | None:intergenic | 35.0% |
| ! | AGCATTTATTCTGGGTTTTC+TGG | - | chr8.4:67258018-67258037 | None:intergenic | 35.0% |
| ! | CACTAATTTTGGATCACTTC+TGG | + | chr8.4:67261022-67261041 | MS.gene79683:CDS | 35.0% |
| ! | CGGGTTTTTACTAGAATATG+TGG | + | chr8.4:67261675-67261694 | MS.gene79683:intron | 35.0% |
| ! | CTCTATTCCTTTAGGTTACA+CGG | - | chr8.4:67261291-67261310 | None:intergenic | 35.0% |
| ! | TATGAAGTGGGAAGATTTTG+AGG | + | chr8.4:67261064-67261083 | MS.gene79683:CDS | 35.0% |
| ! | TCAATCTTTTTACGGAGTGT+TGG | + | chr8.4:67261358-67261377 | MS.gene79683:intron | 35.0% |
| !! | AAATGGGTTGTTGTTAAGGA+TGG | + | chr8.4:67257714-67257733 | MS.gene79683:CDS | 35.0% |
| !! | AAGCAGTAGAAAAGTGTTCA+AGG | - | chr8.4:67261099-67261118 | None:intergenic | 35.0% |
| !! | AATGGGTTGTTGTTAAGGAT+GGG | + | chr8.4:67257715-67257734 | MS.gene79683:CDS | 35.0% |
| !! | AGACAAATGGGTTGTTGTTA+AGG | + | chr8.4:67257710-67257729 | MS.gene79683:CDS | 35.0% |
| !! | TGCTTGAACAAAGCCATTTT+TGG | - | chr8.4:67261951-67261970 | None:intergenic | 35.0% |
| !! | TGGACTTTTTCTTACGTTCA+AGG | - | chr8.4:67257887-67257906 | None:intergenic | 35.0% |
| !! | TTCTTTGTTTGGTTCTGTAG+AGG | + | chr8.4:67258302-67258321 | MS.gene79683:intron | 35.0% |
| !! | TTGTGGTGATGATGTTGTTT+TGG | - | chr8.4:67259466-67259485 | None:intergenic | 35.0% |
| !!! | TTTCCTTTGTTTTCTGCGTT+TGG | + | chr8.4:67259785-67259804 | MS.gene79683:intron | 35.0% |
| AAGAATAGGTCTCCAAGGAA+AGG | - | chr8.4:67261476-67261495 | None:intergenic | 40.0% | |
| AGCTTCCAGAAATCCTTCTT+TGG | - | chr8.4:67257675-67257694 | None:intergenic | 40.0% | |
| AGGATAAAGGAATTGGTCAC+TGG | + | chr8.4:67261431-67261450 | MS.gene79683:intron | 40.0% | |
| ATGAATCGAAATACCTTCGC+CGG | - | chr8.4:67258278-67258297 | None:intergenic | 40.0% | |
| ATGGTTTGAAGAAGTCTCTG+TGG | - | chr8.4:67259655-67259674 | None:intergenic | 40.0% | |
| CAATTACAATGGCAGGTGTA+AGG | + | chr8.4:67258841-67258860 | MS.gene79683:intron | 40.0% | |
| CATGAACAATGTTGTTACGG+CGG | + | chr8.4:67258533-67258552 | MS.gene79683:intron | 40.0% | |
| CATTTGACTGAAACCTCTCT+TGG | + | chr8.4:67261601-67261620 | MS.gene79683:intron | 40.0% | |
| CCAATTCCTTTATCCTGTCA+TGG | - | chr8.4:67261427-67261446 | None:intergenic | 40.0% | |
| CCAGTGTTATGGTCTACAAA+TGG | - | chr8.4:67258228-67258247 | None:intergenic | 40.0% | |
| CCATGACAGGATAAAGGAAT+TGG | + | chr8.4:67261424-67261443 | MS.gene79683:intron | 40.0% | |
| CCATTTGTAGACCATAACAC+TGG | + | chr8.4:67258225-67258244 | MS.gene79683:intron | 40.0% | |
| CGGTGATATTAACCCAAAGA+AGG | + | chr8.4:67257659-67257678 | MS.gene79683:CDS | 40.0% | |
| CTTCTTCAACAGATGGAGAA+CGG | - | chr8.4:67259624-67259643 | None:intergenic | 40.0% | |
| GAAGCTTCTTCTTCAACAGA+TGG | - | chr8.4:67259631-67259650 | None:intergenic | 40.0% | |
| GACTCGTAGTTACTGATAAG+TGG | + | chr8.4:67259948-67259967 | MS.gene79683:intron | 40.0% | |
| GCAATGCTGAGAACAAATAG+AGG | + | chr8.4:67260733-67260752 | MS.gene79683:intron | 40.0% | |
| GCAGGTGAGAAAAATGTTCA+TGG | + | chr8.4:67261835-67261854 | MS.gene79683:intron | 40.0% | |
| GCATTGGAATGTGCCAAAAA+TGG | + | chr8.4:67261935-67261954 | MS.gene79683:CDS | 40.0% | |
| GCTTCCAGAAATCCTTCTTT+GGG | - | chr8.4:67257674-67257693 | None:intergenic | 40.0% | |
| GTGCAAAGAACAAAGAAGTG+TGG | - | chr8.4:67259444-67259463 | None:intergenic | 40.0% | |
| GTTAGAATAGAACAGCAACC+TGG | - | chr8.4:67260671-67260690 | None:intergenic | 40.0% | |
| TCATACATTTGCTCCATGAC+AGG | + | chr8.4:67261411-67261430 | MS.gene79683:intron | 40.0% | |
| TGTGAGGGTGAAAGACAAAT+GGG | + | chr8.4:67257698-67257717 | MS.gene79683:CDS | 40.0% | |
| TTTGCTCCATGACAGGATAA+AGG | + | chr8.4:67261418-67261437 | MS.gene79683:intron | 40.0% | |
| TTTGTAGACCATAACACTGG+TGG | + | chr8.4:67258228-67258247 | MS.gene79683:intron | 40.0% | |
| TTTGTTGGGTTATGATTGGG+GGG | + | chr8.4:67259993-67260012 | MS.gene79683:intron | 40.0% | |
| ! | AGAACAAAGAAGTGTGGTGA+TGG | - | chr8.4:67259438-67259457 | None:intergenic | 40.0% |
| ! | CACAATCAGGAAAAGTATGC+AGG | + | chr8.4:67261817-67261836 | MS.gene79683:CDS | 40.0% |
| ! | CGTTTGTTGGGTTATGATTG+GGG | + | chr8.4:67259991-67260010 | MS.gene79683:intron | 40.0% |
| ! | GGAGACTCTTTTAATGGTGA+TGG | + | chr8.4:67258332-67258351 | MS.gene79683:intron | 40.0% |
| ! | GTTGCTGTGACTCTTGATTT+TGG | - | chr8.4:67259534-67259553 | None:intergenic | 40.0% |
| ! | GTTTGTTGGGTTATGATTGG+GGG | + | chr8.4:67259992-67260011 | MS.gene79683:intron | 40.0% |
| ! | TACAACAGAAGCACGATCAA+TGG | - | chr8.4:67259674-67259693 | None:intergenic | 40.0% |
| ! | TATGTTGGTTGAGATCTAGC+CGG | + | chr8.4:67258372-67258391 | MS.gene79683:intron | 40.0% |
| !! | CAAATTCTAAGGCCTAGCAA+GGG | + | chr8.4:67261969-67261988 | MS.gene79683:CDS | 40.0% |
| !! | CATGACGGAGACTCTTTTAA+TGG | + | chr8.4:67258326-67258345 | MS.gene79683:intron | 40.0% |
| !! | TGGTATAGTTCTGAGCTTCT+AGG | + | chr8.4:67259580-67259599 | MS.gene79683:CDS | 40.0% |
| AACACTTTGCTCCAACAGTG+TGG | + | chr8.4:67260446-67260465 | MS.gene79683:intron | 45.0% | |
| ACAGCTTCCTTAGTCCATTC+TGG | - | chr8.4:67258510-67258529 | None:intergenic | 45.0% | |
| ATCTATTCCTCCCAACTCTC+AGG | + | chr8.4:67260909-67260928 | MS.gene79683:intron | 45.0% | |
| ATGTGAGATCTCCTGAGAGT+TGG | - | chr8.4:67260923-67260942 | None:intergenic | 45.0% | |
| CATCTCAATCACCACTTTCC+CGG | - | chr8.4:67258394-67258413 | None:intergenic | 45.0% | |
| CCAGAAAGAATAGGTCTCCA+AGG | - | chr8.4:67261481-67261500 | None:intergenic | 45.0% | |
| CCTGAAAACTTTCAGGCATG+TGG | + | chr8.4:67261911-67261930 | MS.gene79683:intron | 45.0% | |
| CCTTGGAGACCTATTCTTTC+TGG | + | chr8.4:67261478-67261497 | MS.gene79683:CDS | 45.0% | |
| CTAAGCAGTTAAGGCTGCTT+AGG | - | chr8.4:67261268-67261287 | None:intergenic | 45.0% | |
| CTGTGAGGGTGAAAGACAAA+TGG | + | chr8.4:67257697-67257716 | MS.gene79683:CDS | 45.0% | |
| GAGCACAACAAAAAACTCGC+GGG | - | chr8.4:67260255-67260274 | None:intergenic | 45.0% | |
| GAGGGTTACTTGTGCATAGT+CGG | + | chr8.4:67258484-67258503 | MS.gene79683:intron | 45.0% | |
| GATGGTTATCGTTGATGCCA+AGG | + | chr8.4:67257752-67257771 | MS.gene79683:CDS | 45.0% | |
| GCTGTATCTTGTCCTTTCCT+TGG | + | chr8.4:67261461-67261480 | MS.gene79683:CDS | 45.0% | |
| GGAAGAAGGGAAAGTAAGAG+AGG | + | chr8.4:67258152-67258171 | MS.gene79683:intron | 45.0% | |
| GGAGCACAACAAAAAACTCG+CGG | - | chr8.4:67260256-67260275 | None:intergenic | 45.0% | |
| GTAGTTACTGATAAGTGGGC+AGG | + | chr8.4:67259953-67259972 | MS.gene79683:intron | 45.0% | |
| GTTACACGGCTAAGCAGTTA+AGG | - | chr8.4:67261277-67261296 | None:intergenic | 45.0% | |
| TGCTTAGCCGTGTAACCTAA+AGG | + | chr8.4:67261281-67261300 | MS.gene79683:intron | 45.0% | |
| TGTGAGATCTCCTGAGAGTT+GGG | - | chr8.4:67260922-67260941 | None:intergenic | 45.0% | |
| TTACTGATAAGTGGGCAGGT+CGG | + | chr8.4:67259957-67259976 | MS.gene79683:intron | 45.0% | |
| TTGTGAATTTGCGGATCCAG+CGG | + | chr8.4:67260962-67260981 | MS.gene79683:CDS | 45.0% | |
| ! | AATGGTTTGTGGAGATGGCT+TGG | + | chr8.4:67260172-67260191 | MS.gene79683:intron | 45.0% |
| ! | AGTCCTTTAAAAGATCCCGC+TGG | - | chr8.4:67260981-67261000 | None:intergenic | 45.0% |
| ! | ATCTGAAGCCACCAGTGTTA+TGG | - | chr8.4:67258239-67258258 | None:intergenic | 45.0% |
| ! | ATGTTGGTTGAGATCTAGCC+GGG | + | chr8.4:67258373-67258392 | MS.gene79683:intron | 45.0% |
| ! | ATTTCTGGAAGCTGACTGTG+AGG | + | chr8.4:67257682-67257701 | MS.gene79683:CDS | 45.0% |
| ! | CCACATGCCTGAAAGTTTTC+AGG | - | chr8.4:67261914-67261933 | None:intergenic | 45.0% |
| ! | GATCCAGCGGGATCTTTTAA+AGG | + | chr8.4:67260975-67260994 | MS.gene79683:CDS | 45.0% |
| ! | GGTTGTTGTTAAGGATGGGA+GGG | + | chr8.4:67257719-67257738 | MS.gene79683:CDS | 45.0% |
| ! | TGGTTCTGTAGAGGACATGA+CGG | + | chr8.4:67258311-67258330 | MS.gene79683:intron | 45.0% |
| ! | TGTGGAATGGTTTGTGGAGA+TGG | + | chr8.4:67260167-67260186 | MS.gene79683:intron | 45.0% |
| ! | TTGTTACGGCGGCTAACTTT+TGG | + | chr8.4:67258544-67258563 | MS.gene79683:intron | 45.0% |
| ! | TTTCTGGAAGCTGACTGTGA+GGG | + | chr8.4:67257683-67257702 | MS.gene79683:CDS | 45.0% |
| !! | GCAAATTCTAAGGCCTAGCA+AGG | + | chr8.4:67261968-67261987 | MS.gene79683:CDS | 45.0% |
| !! | GTGGTGATGGTTGTGACTAA+TGG | - | chr8.4:67259425-67259444 | None:intergenic | 45.0% |
| !!! | CTTGGTTTTTCAGGTTGTGG+GGG | + | chr8.4:67260190-67260209 | MS.gene79683:intron | 45.0% |
| !!! | GCTTGGTTTTTCAGGTTGTG+GGG | + | chr8.4:67260189-67260208 | MS.gene79683:intron | 45.0% |
| !!! | GGCTTGGTTTTTCAGGTTGT+GGG | + | chr8.4:67260188-67260207 | MS.gene79683:intron | 45.0% |
| !!! | TGGAGATGGCTTGGTTTTTC+AGG | + | chr8.4:67260181-67260200 | MS.gene79683:intron | 45.0% |
| !!! | TGGCTTGGTTTTTCAGGTTG+TGG | + | chr8.4:67260187-67260206 | MS.gene79683:intron | 45.0% |
| !! | TTAAAATAATAATTATATAC+GGG | + | chr8.4:67258926-67258945 | MS.gene79683:intron | 5.0% |
| AATATACCCGTGCATCCGCA+CGG | - | chr8.4:67259283-67259302 | None:intergenic | 50.0% | |
| ACCCAACAAACGTTTGAGCC+TGG | - | chr8.4:67259983-67260002 | None:intergenic | 50.0% | |
| ATTCACGACGAGTGTGTGCA+AGG | - | chr8.4:67260277-67260296 | None:intergenic | 50.0% | |
| CTGTGTAAATACACCCGCGA+GGG | + | chr8.4:67260144-67260163 | MS.gene79683:intron | 50.0% | |
| CTTTCAGGCATGTGGAGCAT+TGG | + | chr8.4:67261919-67261938 | MS.gene79683:intron | 50.0% | |
| GCCAGGCTCAAACGTTTGTT+GGG | + | chr8.4:67259979-67259998 | MS.gene79683:intron | 50.0% | |
| TCTGTGTAAATACACCCGCG+AGG | + | chr8.4:67260143-67260162 | MS.gene79683:intron | 50.0% | |
| TGTGAATTTGCGGATCCAGC+GGG | + | chr8.4:67260963-67260982 | MS.gene79683:CDS | 50.0% | |
| TTGAGATCTAGCCGGGAAAG+TGG | + | chr8.4:67258380-67258399 | MS.gene79683:intron | 50.0% | |
| TTGCTCCAACAGTGTGGTTC+AGG | + | chr8.4:67260452-67260471 | MS.gene79683:intron | 50.0% | |
| TTGCTCCTGAACCACACTGT+TGG | - | chr8.4:67260460-67260479 | None:intergenic | 50.0% | |
| TTGTGCATAGTCGGCCAGAA+TGG | + | chr8.4:67258493-67258512 | MS.gene79683:intron | 50.0% | |
| ! | GGGTTGTTGTTAAGGATGGG+AGG | + | chr8.4:67257718-67257737 | MS.gene79683:CDS | 50.0% |
| ! | TACGGCGGCTAACTTTTGGT+TGG | + | chr8.4:67258548-67258567 | MS.gene79683:intron | 50.0% |
| !! | ACGGCGGCTAACTTTTGGTT+GGG | + | chr8.4:67258549-67258568 | MS.gene79683:intron | 50.0% |
| !! | TAGTCGGCCAGAATGGACTA+AGG | + | chr8.4:67258500-67258519 | MS.gene79683:intron | 50.0% |
| AAACCATTCCACACCCTCGC+GGG | - | chr8.4:67260160-67260179 | None:intergenic | 55.0% | |
| ACTGCATCCCGCTTTGCAGT+CGG | + | chr8.4:67260563-67260582 | MS.gene79683:intron | 55.0% | |
| ATATACCCGTGCATCCGCAC+GGG | - | chr8.4:67259282-67259301 | None:intergenic | 55.0% | |
| CAAACCATTCCACACCCTCG+CGG | - | chr8.4:67260161-67260180 | None:intergenic | 55.0% | |
| CTACGTCTCCGACTGCAAAG+CGG | - | chr8.4:67260574-67260593 | None:intergenic | 55.0% | |
| GAGATCTCCTGAGAGTTGGG+AGG | - | chr8.4:67260919-67260938 | None:intergenic | 55.0% | |
| GGCCAGGCTCAAACGTTTGT+TGG | + | chr8.4:67259978-67259997 | MS.gene79683:intron | 55.0% | |
| GGTTATGATTGGGGGGTTGC+TGG | + | chr8.4:67260000-67260019 | MS.gene79683:intron | 55.0% | |
| TAAATACACCCGCGAGGGTG+TGG | + | chr8.4:67260149-67260168 | MS.gene79683:intron | 55.0% | |
| TACGTCTCCGACTGCAAAGC+GGG | - | chr8.4:67260573-67260592 | None:intergenic | 55.0% | |
| TATGATTGGGGGGTTGCTGG+AGG | + | chr8.4:67260003-67260022 | MS.gene79683:intron | 55.0% | |
| ! | CGAGGGTGTGGAATGGTTTG+TGG | + | chr8.4:67260161-67260180 | MS.gene79683:intron | 55.0% |
| !! | CGGCGGCTAACTTTTGGTTG+GGG | + | chr8.4:67258550-67258569 | MS.gene79683:intron | 55.0% |
| !! | CGGCTAACTTTTGGTTGGGG+AGG | + | chr8.4:67258553-67258572 | MS.gene79683:intron | 55.0% |
| !! | TAAGGATGGGAGGGAGCACT+TGG | + | chr8.4:67257728-67257747 | MS.gene79683:CDS | 55.0% |
| !! | TTTCAGGTTGTGGGGGTTGC+TGG | + | chr8.4:67260197-67260216 | MS.gene79683:intron | 55.0% |
| ACGACGAACCTGTACCCGTG+CGG | + | chr8.4:67259265-67259284 | MS.gene79683:intron | 60.0% | |
| CACGGGTACAGGTTCGTCGT+GGG | - | chr8.4:67259265-67259284 | None:intergenic | 60.0% | |
| CGCTTTGCAGTCGGAGACGT+AGG | + | chr8.4:67260572-67260591 | MS.gene79683:intron | 60.0% | |
| GGTGGCTTCAGATTCCGTCG+CGG | + | chr8.4:67258246-67258265 | MS.gene79683:CDS | 60.0% | |
| !! | TGGGAGGGAGCACTTGGAGA+TGG | + | chr8.4:67257734-67257753 | MS.gene79683:CDS | 60.0% |
| CCTGTACCCGTGCGGATGCA+CGG | + | chr8.4:67259273-67259292 | MS.gene79683:intron | 65.0% | |
| CTGTACCCGTGCGGATGCAC+GGG | + | chr8.4:67259274-67259293 | MS.gene79683:intron | 65.0% | |
| GATAAGTGGGCAGGTCGGCC+AGG | + | chr8.4:67259962-67259981 | MS.gene79683:intron | 65.0% | |
| GCACGGGTACAGGTTCGTCG+TGG | - | chr8.4:67259266-67259285 | None:intergenic | 65.0% | |
| GGCTTCAGATTCCGTCGCGG+TGG | + | chr8.4:67258249-67258268 | MS.gene79683:CDS | 65.0% | |
| ! | ACACCCGCGAGGGTGTGGAA+TGG | + | chr8.4:67260154-67260173 | MS.gene79683:intron | 65.0% |
| CCGTGCATCCGCACGGGTAC+AGG | - | chr8.4:67259276-67259295 | None:intergenic | 70.0% | |
| GATTCCGTCGCGGTGGTCGC+CGG | + | chr8.4:67258256-67258275 | MS.gene79683:CDS | 70.0% | |
| TTCGCCGGCGACCACCGCGA+CGG | - | chr8.4:67258263-67258282 | None:intergenic | 75.0% | |
| ! | GTCGCGGTGGTCGCCGGCGA+AGG | + | chr8.4:67258262-67258281 | MS.gene79683:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 67257636 | 67262040 | 67257636 | ID=MS.gene79683 |
| chr8.4 | mRNA | 67257636 | 67262040 | 67257636 | ID=MS.gene79683.t1;Parent=MS.gene79683 |
| chr8.4 | exon | 67257636 | 67257773 | 67257636 | ID=MS.gene79683.t1.exon1;Parent=MS.gene79683.t1 |
| chr8.4 | CDS | 67257636 | 67257773 | 67257636 | ID=cds.MS.gene79683.t1;Parent=MS.gene79683.t1 |
| chr8.4 | exon | 67258235 | 67258283 | 67258235 | ID=MS.gene79683.t1.exon2;Parent=MS.gene79683.t1 |
| chr8.4 | CDS | 67258235 | 67258283 | 67258235 | ID=cds.MS.gene79683.t1;Parent=MS.gene79683.t1 |
| chr8.4 | exon | 67259335 | 67259736 | 67259335 | ID=MS.gene79683.t1.exon3;Parent=MS.gene79683.t1 |
| chr8.4 | CDS | 67259335 | 67259736 | 67259335 | ID=cds.MS.gene79683.t1;Parent=MS.gene79683.t1 |
| chr8.4 | exon | 67260931 | 67261085 | 67260931 | ID=MS.gene79683.t1.exon4;Parent=MS.gene79683.t1 |
| chr8.4 | CDS | 67260931 | 67261085 | 67260931 | ID=cds.MS.gene79683.t1;Parent=MS.gene79683.t1 |
| chr8.4 | exon | 67261433 | 67261499 | 67261433 | ID=MS.gene79683.t1.exon5;Parent=MS.gene79683.t1 |
| chr8.4 | CDS | 67261433 | 67261499 | 67261433 | ID=cds.MS.gene79683.t1;Parent=MS.gene79683.t1 |
| chr8.4 | exon | 67261787 | 67261838 | 67261787 | ID=MS.gene79683.t1.exon6;Parent=MS.gene79683.t1 |
| chr8.4 | CDS | 67261787 | 67261838 | 67261787 | ID=cds.MS.gene79683.t1;Parent=MS.gene79683.t1 |
| chr8.4 | exon | 67261926 | 67262040 | 67261926 | ID=MS.gene79683.t1.exon7;Parent=MS.gene79683.t1 |
| chr8.4 | CDS | 67261926 | 67262040 | 67261926 | ID=cds.MS.gene79683.t1;Parent=MS.gene79683.t1 |
| Gene Sequence |
| Protein sequence |
