Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85315.t1 | ABN08342.1 | 98.3 | 296 | 5 | 0 | 1 | 296 | 1 | 296 | 1.30E-140 | 509.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85315.t1 | Q43062 | 52.8 | 290 | 130 | 3 | 9 | 295 | 4 | 289 | 6.1e-75 | 282.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85315.t1 | A2Q3Z2 | 98.3 | 296 | 5 | 0 | 1 | 296 | 1 | 296 | 9.2e-141 | 509.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene85315 | 0.841609 | 4.28E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene85315 | 0.816607 | 5.07E-52 | -1.69E-46 |
| MS.gene049828 | MS.gene85315 | 0.836653 | 8.25E-57 | -1.69E-46 |
| MS.gene049907 | MS.gene85315 | 0.853008 | 3.17E-61 | -1.69E-46 |
| MS.gene050122 | MS.gene85315 | 0.815927 | 7.19E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene85315 | 0.804337 | 2.27E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene85315 | 0.841252 | 5.32E-58 | -1.69E-46 |
| MS.gene050581 | MS.gene85315 | 0.825526 | 4.47E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene85315 | 0.8084 | 3.16E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene85315 | 0.808759 | 2.65E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene85315 | 0.818834 | 1.59E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene85315 | 0.802708 | 4.94E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene85315 | 0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene85315 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene85315 | 0.810911 | 9.11E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene85315 | 0.804261 | 2.35E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene85315 | 0.888108 | 7.91E-73 | -1.69E-46 |
| MS.gene053912 | MS.gene85315 | 0.805528 | 1.28E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene85315 | 0.827897 | 1.21E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene85315 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene85315 | 0.801674 | 8.05E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene85315 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene85315 | 0.804164 | 2.46E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene85315 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene85315 | 0.814684 | 1.36E-51 | -1.69E-46 |
| MS.gene055802 | MS.gene85315 | 0.844726 | 6.32E-59 | -1.69E-46 |
| MS.gene055909 | MS.gene85315 | 0.808063 | 3.72E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene85315 | 0.812544 | 4.02E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene85315 | 0.805674 | 1.19E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene85315 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene85315 | 0.818894 | 1.54E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene85315 | 0.800077 | 1.71E-48 | -1.69E-46 |
| MS.gene056931 | MS.gene85315 | 0.830894 | 2.27E-55 | -1.69E-46 |
| MS.gene056933 | MS.gene85315 | 0.829532 | 4.88E-55 | -1.69E-46 |
| MS.gene056935 | MS.gene85315 | 0.821165 | 4.67E-53 | -1.69E-46 |
| MS.gene056942 | MS.gene85315 | 0.826862 | 2.15E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene85315 | 0.815692 | 8.12E-52 | -1.69E-46 |
| MS.gene057285 | MS.gene85315 | 0.832616 | 8.54E-56 | -1.69E-46 |
| MS.gene05735 | MS.gene85315 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene85315 | 0.810684 | 1.02E-50 | -1.69E-46 |
| MS.gene057537 | MS.gene85315 | 0.830272 | 3.22E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene85315 | 0.807898 | 4.04E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene85315 | 0.809079 | 2.26E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene85315 | 0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene85315 | 0.820953 | 5.22E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene85315 | 0.812854 | 3.44E-51 | -1.69E-46 |
| MS.gene058459 | MS.gene85315 | 0.816606 | 5.07E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene85315 | 0.825647 | 4.18E-54 | -1.69E-46 |
| MS.gene058903 | MS.gene85315 | 0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene85315 | 0.806182 | 9.32E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene85315 | 0.814411 | 1.56E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene85315 | 0.832655 | 8.35E-56 | -1.69E-46 |
| MS.gene059529 | MS.gene85315 | 0.821298 | 4.35E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene85315 | 0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene85315 | 0.814693 | 1.35E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene85315 | 0.804982 | 1.66E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene85315 | 0.807453 | 5.02E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene85315 | 0.876107 | 1.82E-68 | -1.69E-46 |
| MS.gene05986 | MS.gene85315 | 0.802457 | 5.56E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene85315 | 0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene060005 | MS.gene85315 | 0.815148 | 1.07E-51 | -1.69E-46 |
| MS.gene060356 | MS.gene85315 | 0.87725 | 7.30E-69 | -1.69E-46 |
| MS.gene060559 | MS.gene85315 | 0.814081 | 1.85E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene85315 | 0.83377 | 4.41E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene85315 | -0.802987 | 4.32E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene85315 | 0.851019 | 1.17E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85315.t1 | MTR_2g044880 | 98.305 | 295 | 5 | 0 | 1 | 295 | 1 | 295 | 0.0 | 598 |
| MS.gene85315.t1 | MTR_4g087980 | 58.233 | 249 | 92 | 4 | 51 | 295 | 46 | 286 | 1.03e-95 | 292 |
| MS.gene85315.t1 | MTR_4g087970 | 53.815 | 249 | 111 | 2 | 51 | 298 | 45 | 290 | 8.82e-92 | 282 |
| MS.gene85315.t1 | MTR_7g112580 | 38.153 | 249 | 135 | 7 | 61 | 296 | 80 | 322 | 1.37e-48 | 170 |
| MS.gene85315.t1 | MTR_7g050870 | 47.619 | 210 | 94 | 7 | 92 | 294 | 121 | 321 | 2.38e-48 | 169 |
| MS.gene85315.t1 | MTR_7g050980 | 46.919 | 211 | 94 | 8 | 92 | 294 | 122 | 322 | 8.94e-45 | 159 |
| MS.gene85315.t1 | MTR_7g050950 | 43.128 | 211 | 110 | 6 | 88 | 294 | 117 | 321 | 3.60e-42 | 152 |
| MS.gene85315.t1 | MTR_7g108905 | 40.092 | 217 | 116 | 6 | 92 | 296 | 113 | 327 | 1.52e-41 | 151 |
| MS.gene85315.t1 | MTR_4g025690 | 41.667 | 216 | 107 | 5 | 81 | 294 | 85 | 283 | 1.54e-37 | 139 |
| MS.gene85315.t1 | MTR_8g023310 | 39.912 | 228 | 107 | 6 | 92 | 294 | 136 | 358 | 2.04e-37 | 140 |
| MS.gene85315.t1 | MTR_8g042900 | 36.486 | 222 | 125 | 4 | 86 | 296 | 141 | 357 | 2.65e-37 | 139 |
| MS.gene85315.t1 | MTR_3g010780 | 34.842 | 221 | 130 | 4 | 86 | 296 | 134 | 350 | 4.78e-37 | 139 |
| MS.gene85315.t1 | MTR_2g039530 | 61.207 | 116 | 41 | 2 | 182 | 296 | 22 | 134 | 1.59e-36 | 133 |
| MS.gene85315.t1 | MTR_1g008140 | 35.443 | 237 | 126 | 8 | 86 | 295 | 141 | 377 | 6.21e-36 | 136 |
| MS.gene85315.t1 | MTR_4g025730 | 34.122 | 296 | 154 | 8 | 20 | 294 | 6 | 281 | 1.40e-35 | 134 |
| MS.gene85315.t1 | MTR_1g086190 | 35.683 | 227 | 120 | 7 | 92 | 295 | 112 | 335 | 1.96e-34 | 131 |
| MS.gene85315.t1 | MTR_1g083520 | 34.219 | 301 | 166 | 10 | 19 | 296 | 6 | 297 | 4.57e-34 | 130 |
| MS.gene85315.t1 | MTR_3g091380 | 32.889 | 225 | 129 | 5 | 92 | 295 | 144 | 367 | 1.64e-33 | 129 |
| MS.gene85315.t1 | MTR_2g044810 | 41.379 | 174 | 91 | 4 | 129 | 296 | 138 | 306 | 3.52e-33 | 127 |
| MS.gene85315.t1 | MTR_8g104655 | 37.052 | 251 | 116 | 8 | 71 | 296 | 79 | 312 | 4.93e-33 | 127 |
| MS.gene85315.t1 | MTR_4g124520 | 40.698 | 172 | 94 | 5 | 130 | 296 | 123 | 291 | 1.88e-32 | 125 |
| MS.gene85315.t1 | MTR_1g086210 | 35.498 | 231 | 117 | 8 | 92 | 295 | 108 | 333 | 1.09e-31 | 124 |
| MS.gene85315.t1 | MTR_3g008700 | 38.462 | 182 | 106 | 5 | 118 | 296 | 119 | 297 | 1.98e-30 | 120 |
| MS.gene85315.t1 | MTR_7g053360 | 37.912 | 182 | 107 | 5 | 118 | 296 | 119 | 297 | 5.26e-30 | 119 |
| MS.gene85315.t1 | MTR_7g108875 | 37.917 | 240 | 110 | 9 | 92 | 296 | 101 | 336 | 5.52e-30 | 119 |
| MS.gene85315.t1 | MTR_3g008640 | 39.130 | 184 | 102 | 6 | 118 | 296 | 119 | 297 | 5.58e-30 | 119 |
| MS.gene85315.t1 | MTR_8g104580 | 35.458 | 251 | 120 | 8 | 71 | 296 | 71 | 304 | 6.83e-30 | 118 |
| MS.gene85315.t1 | MTR_7g112590 | 34.034 | 238 | 124 | 6 | 86 | 294 | 117 | 350 | 2.66e-29 | 117 |
| MS.gene85315.t1 | MTR_2g436040 | 29.434 | 265 | 173 | 5 | 38 | 298 | 61 | 315 | 7.36e-29 | 116 |
| MS.gene85315.t1 | MTR_7g110560 | 26.619 | 278 | 178 | 7 | 36 | 295 | 51 | 320 | 1.46e-28 | 115 |
| MS.gene85315.t1 | MTR_1g083510 | 33.333 | 240 | 127 | 6 | 86 | 294 | 114 | 351 | 1.72e-28 | 115 |
| MS.gene85315.t1 | MTR_8g104645 | 52.500 | 120 | 45 | 3 | 188 | 295 | 23 | 142 | 2.83e-28 | 112 |
| MS.gene85315.t1 | MTR_3g008720 | 38.043 | 184 | 104 | 6 | 118 | 296 | 119 | 297 | 4.03e-28 | 113 |
| MS.gene85315.t1 | MTR_7g110490 | 33.193 | 238 | 119 | 9 | 92 | 295 | 108 | 339 | 6.88e-28 | 113 |
| MS.gene85315.t1 | MTR_7g110510 | 33.193 | 238 | 119 | 9 | 92 | 295 | 108 | 339 | 6.88e-28 | 113 |
| MS.gene85315.t1 | MTR_1g054880 | 35.656 | 244 | 109 | 7 | 92 | 296 | 96 | 330 | 7.07e-28 | 113 |
| MS.gene85315.t1 | MTR_4g124550 | 31.518 | 257 | 148 | 7 | 58 | 295 | 118 | 365 | 1.20e-27 | 112 |
| MS.gene85315.t1 | MTR_4g120290 | 34.715 | 193 | 110 | 3 | 122 | 298 | 149 | 341 | 1.63e-27 | 112 |
| MS.gene85315.t1 | MTR_3g033690 | 37.297 | 185 | 104 | 6 | 118 | 296 | 118 | 296 | 2.74e-27 | 111 |
| MS.gene85315.t1 | MTR_1g083470 | 34.071 | 226 | 126 | 6 | 86 | 294 | 118 | 337 | 4.04e-27 | 111 |
| MS.gene85315.t1 | MTR_1g083500 | 34.071 | 226 | 126 | 6 | 86 | 294 | 118 | 337 | 4.04e-27 | 111 |
| MS.gene85315.t1 | MTR_4g120280 | 35.676 | 185 | 103 | 3 | 130 | 298 | 157 | 341 | 5.27e-27 | 110 |
| MS.gene85315.t1 | MTR_7g108900 | 31.544 | 298 | 160 | 11 | 34 | 296 | 44 | 332 | 6.68e-27 | 110 |
| MS.gene85315.t1 | MTR_7g110440 | 32.636 | 239 | 119 | 9 | 92 | 295 | 108 | 339 | 9.21e-27 | 110 |
| MS.gene85315.t1 | MTR_4g005180 | 32.589 | 224 | 132 | 5 | 86 | 294 | 105 | 324 | 4.68e-26 | 108 |
| MS.gene85315.t1 | MTR_2g436050 | 29.362 | 235 | 131 | 4 | 86 | 298 | 112 | 333 | 7.09e-26 | 107 |
| MS.gene85315.t1 | MTR_7g110430 | 31.513 | 238 | 123 | 8 | 92 | 295 | 108 | 339 | 7.83e-26 | 107 |
| MS.gene85315.t1 | MTR_7g110420 | 31.513 | 238 | 123 | 8 | 92 | 295 | 108 | 339 | 2.78e-25 | 105 |
| MS.gene85315.t1 | MTR_1g083490 | 32.143 | 224 | 133 | 5 | 86 | 294 | 123 | 342 | 4.00e-25 | 105 |
| MS.gene85315.t1 | MTR_4g005170 | 32.143 | 224 | 133 | 5 | 86 | 294 | 123 | 342 | 4.70e-25 | 105 |
| MS.gene85315.t1 | MTR_8g023150 | 33.929 | 224 | 133 | 5 | 86 | 296 | 134 | 355 | 5.50e-25 | 105 |
| MS.gene85315.t1 | MTR_4g035980 | 36.413 | 184 | 89 | 6 | 130 | 296 | 137 | 309 | 2.29e-24 | 103 |
| MS.gene85315.t1 | MTR_0458s0010 | 33.594 | 256 | 121 | 9 | 80 | 295 | 80 | 326 | 2.71e-23 | 99.8 |
| MS.gene85315.t1 | MTR_8g042910 | 32.932 | 249 | 116 | 10 | 92 | 296 | 143 | 384 | 4.16e-23 | 99.8 |
| MS.gene85315.t1 | MTR_1g088225 | 33.203 | 256 | 122 | 9 | 80 | 295 | 80 | 326 | 1.38e-22 | 97.8 |
| MS.gene85315.t1 | MTR_1g088020 | 33.203 | 256 | 122 | 9 | 80 | 295 | 80 | 326 | 1.53e-22 | 97.8 |
| MS.gene85315.t1 | MTR_2g436070 | 28.700 | 223 | 124 | 4 | 86 | 286 | 112 | 321 | 3.61e-22 | 95.5 |
| MS.gene85315.t1 | MTR_7g108890 | 36.279 | 215 | 95 | 6 | 122 | 296 | 122 | 334 | 6.49e-22 | 95.9 |
| MS.gene85315.t1 | MTR_4g025670 | 34.659 | 176 | 95 | 5 | 130 | 295 | 94 | 259 | 6.42e-21 | 92.8 |
| MS.gene85315.t1 | MTR_5g083620 | 41.346 | 104 | 58 | 2 | 195 | 295 | 23 | 126 | 5.11e-19 | 86.3 |
| MS.gene85315.t1 | MTR_2g044660 | 51.220 | 82 | 40 | 0 | 214 | 295 | 326 | 407 | 1.52e-18 | 86.3 |
| MS.gene85315.t1 | MTR_3g010770 | 50.588 | 85 | 39 | 1 | 215 | 296 | 263 | 347 | 2.05e-18 | 85.5 |
| MS.gene85315.t1 | MTR_8g088610 | 44.037 | 109 | 52 | 4 | 192 | 295 | 43 | 147 | 8.86e-18 | 83.2 |
| MS.gene85315.t1 | MTR_0633s0010 | 50.725 | 69 | 30 | 3 | 229 | 295 | 1 | 67 | 6.23e-13 | 63.2 |
| MS.gene85315.t1 | MTR_8g093460 | 29.646 | 226 | 119 | 8 | 92 | 294 | 107 | 315 | 1.43e-12 | 68.2 |
| MS.gene85315.t1 | MTR_1g492770 | 51.471 | 68 | 29 | 3 | 229 | 294 | 1 | 66 | 1.67e-12 | 62.4 |
| MS.gene85315.t1 | MTR_7g111560 | 27.570 | 214 | 135 | 7 | 90 | 295 | 120 | 321 | 8.12e-11 | 62.8 |
| MS.gene85315.t1 | MTR_3g095920 | 29.947 | 187 | 110 | 6 | 130 | 296 | 145 | 330 | 9.44e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85315.t1 | AT4G33220 | 53.741 | 294 | 106 | 5 | 25 | 295 | 7 | 293 | 7.50e-104 | 313 |
| MS.gene85315.t1 | AT3G43270 | 52.448 | 286 | 119 | 5 | 26 | 295 | 11 | 295 | 6.32e-95 | 290 |
| MS.gene85315.t1 | AT4G33220 | 53.488 | 172 | 58 | 1 | 146 | 295 | 1 | 172 | 1.75e-57 | 190 |
| MS.gene85315.t1 | AT3G05620 | 37.220 | 223 | 124 | 4 | 87 | 294 | 99 | 320 | 1.14e-41 | 151 |
| MS.gene85315.t1 | AT1G11580 | 43.981 | 216 | 101 | 6 | 94 | 298 | 124 | 330 | 5.74e-41 | 149 |
| MS.gene85315.t1 | AT1G11580 | 43.981 | 216 | 101 | 6 | 94 | 298 | 145 | 351 | 7.37e-41 | 149 |
| MS.gene85315.t1 | AT5G53370 | 39.556 | 225 | 114 | 8 | 88 | 295 | 136 | 355 | 6.13e-39 | 144 |
| MS.gene85315.t1 | AT5G53370 | 39.556 | 225 | 114 | 8 | 88 | 295 | 172 | 391 | 7.10e-39 | 144 |
| MS.gene85315.t1 | AT2G26440 | 33.681 | 288 | 162 | 9 | 32 | 295 | 36 | 318 | 1.13e-36 | 137 |
| MS.gene85315.t1 | AT2G45220 | 37.037 | 270 | 141 | 11 | 35 | 294 | 32 | 282 | 4.36e-35 | 132 |
| MS.gene85315.t1 | AT4G02320 | 36.123 | 227 | 109 | 7 | 92 | 296 | 77 | 289 | 2.44e-34 | 130 |
| MS.gene85315.t1 | AT3G49220 | 29.967 | 307 | 171 | 10 | 27 | 297 | 115 | 413 | 2.89e-34 | 129 |
| MS.gene85315.t1 | AT4G02300 | 34.685 | 222 | 117 | 6 | 92 | 296 | 93 | 303 | 5.39e-34 | 130 |
| MS.gene85315.t1 | AT1G53840 | 31.197 | 234 | 135 | 3 | 86 | 296 | 132 | 362 | 2.36e-33 | 129 |
| MS.gene85315.t1 | AT3G14310 | 36.777 | 242 | 116 | 6 | 88 | 294 | 122 | 361 | 2.45e-33 | 129 |
| MS.gene85315.t1 | AT1G53830 | 38.723 | 235 | 113 | 7 | 88 | 294 | 125 | 356 | 3.13e-33 | 128 |
| MS.gene85315.t1 | AT5G51490 | 36.818 | 220 | 122 | 5 | 86 | 296 | 94 | 305 | 6.23e-32 | 124 |
| MS.gene85315.t1 | AT2G26450 | 40.000 | 185 | 96 | 3 | 122 | 295 | 202 | 382 | 6.29e-32 | 125 |
| MS.gene85315.t1 | AT3G49220 | 29.739 | 306 | 171 | 10 | 27 | 296 | 115 | 412 | 7.03e-32 | 125 |
| MS.gene85315.t1 | AT3G05610 | 33.778 | 225 | 128 | 6 | 86 | 294 | 116 | 335 | 7.32e-32 | 125 |
| MS.gene85315.t1 | AT5G51500 | 37.788 | 217 | 124 | 6 | 86 | 296 | 98 | 309 | 8.91e-32 | 124 |
| MS.gene85315.t1 | AT3G49220 | 29.836 | 305 | 170 | 10 | 27 | 295 | 70 | 366 | 1.03e-31 | 124 |
| MS.gene85315.t1 | AT3G14300 | 34.956 | 226 | 130 | 5 | 86 | 296 | 519 | 742 | 1.42e-30 | 121 |
| MS.gene85315.t1 | AT1G23200 | 32.491 | 277 | 133 | 7 | 59 | 296 | 73 | 334 | 1.95e-29 | 117 |
| MS.gene85315.t1 | AT5G27870 | 30.942 | 223 | 135 | 6 | 86 | 294 | 115 | 332 | 6.72e-29 | 116 |
| MS.gene85315.t1 | AT3G10710 | 31.687 | 243 | 136 | 8 | 69 | 296 | 110 | 337 | 8.98e-28 | 112 |
| MS.gene85315.t1 | AT3G59010 | 35.586 | 222 | 111 | 7 | 91 | 294 | 100 | 307 | 2.36e-27 | 111 |
| MS.gene85315.t1 | AT4G33230 | 33.784 | 222 | 127 | 6 | 91 | 295 | 159 | 377 | 5.95e-27 | 110 |
| MS.gene85315.t1 | AT3G47400 | 34.649 | 228 | 128 | 7 | 84 | 296 | 142 | 363 | 5.09e-26 | 108 |
| MS.gene85315.t1 | AT5G04960 | 29.617 | 287 | 168 | 8 | 31 | 296 | 66 | 339 | 6.53e-26 | 107 |
| MS.gene85315.t1 | AT2G43050 | 34.272 | 213 | 117 | 7 | 91 | 294 | 96 | 294 | 1.54e-25 | 106 |
| MS.gene85315.t1 | AT4G02330 | 32.129 | 249 | 124 | 9 | 92 | 296 | 96 | 343 | 1.82e-24 | 103 |
| MS.gene85315.t1 | AT5G49180 | 36.508 | 189 | 99 | 6 | 130 | 298 | 157 | 344 | 1.92e-24 | 103 |
| MS.gene85315.t1 | AT4G03930 | 37.500 | 176 | 100 | 4 | 130 | 298 | 127 | 299 | 7.20e-24 | 101 |
| MS.gene85315.t1 | AT2G47550 | 34.177 | 237 | 117 | 7 | 92 | 295 | 99 | 329 | 1.18e-23 | 101 |
| MS.gene85315.t1 | AT3G27980 | 38.596 | 171 | 97 | 3 | 132 | 298 | 106 | 272 | 1.06e-22 | 98.2 |
| MS.gene85315.t1 | AT1G11590 | 38.068 | 176 | 99 | 4 | 130 | 298 | 127 | 299 | 4.48e-22 | 96.3 |
| MS.gene85315.t1 | AT4G00190 | 30.916 | 262 | 144 | 8 | 36 | 295 | 21 | 247 | 1.44e-21 | 94.7 |
| MS.gene85315.t1 | AT1G02810 | 54.118 | 85 | 36 | 1 | 215 | 296 | 265 | 349 | 1.69e-21 | 94.7 |
| MS.gene85315.t1 | AT1G11370 | 50.000 | 90 | 45 | 0 | 207 | 296 | 38 | 127 | 1.07e-20 | 90.1 |
| MS.gene85315.t1 | AT5G20860 | 34.286 | 210 | 124 | 6 | 90 | 294 | 105 | 305 | 2.63e-20 | 91.3 |
| MS.gene85315.t1 | AT5G04970 | 28.926 | 242 | 132 | 7 | 91 | 295 | 153 | 391 | 3.59e-20 | 90.9 |
| MS.gene85315.t1 | AT3G06830 | 32.642 | 193 | 99 | 7 | 130 | 295 | 151 | 339 | 3.60e-20 | 90.9 |
| MS.gene85315.t1 | AT4G15980 | 38.346 | 133 | 73 | 4 | 175 | 298 | 344 | 476 | 3.99e-20 | 90.9 |
| MS.gene85315.t1 | AT4G15980 | 38.346 | 133 | 73 | 4 | 175 | 298 | 354 | 486 | 5.67e-20 | 90.5 |
| MS.gene85315.t1 | AT3G10720 | 30.453 | 243 | 125 | 9 | 92 | 295 | 149 | 386 | 6.83e-20 | 90.1 |
| MS.gene85315.t1 | AT3G60730 | 31.472 | 197 | 102 | 4 | 130 | 296 | 97 | 290 | 3.68e-19 | 87.8 |
| MS.gene85315.t1 | AT1G44980 | 42.593 | 108 | 58 | 1 | 195 | 298 | 54 | 161 | 1.24e-18 | 83.6 |
| MS.gene85315.t1 | AT2G47040 | 42.857 | 98 | 47 | 1 | 194 | 282 | 254 | 351 | 1.58e-15 | 77.0 |
| MS.gene85315.t1 | AT2G47030 | 42.609 | 115 | 52 | 2 | 194 | 294 | 244 | 358 | 1.71e-15 | 77.0 |
| MS.gene85315.t1 | AT5G09760 | 43.820 | 89 | 48 | 2 | 210 | 296 | 262 | 350 | 8.63e-14 | 72.0 |
| MS.gene85315.t1 | AT3G62170 | 38.532 | 109 | 47 | 1 | 194 | 282 | 236 | 344 | 1.08e-13 | 71.6 |
| MS.gene85315.t1 | AT5G09760 | 43.820 | 89 | 48 | 2 | 210 | 296 | 236 | 324 | 1.09e-13 | 71.6 |
| MS.gene85315.t1 | AT5G64640 | 28.643 | 199 | 97 | 6 | 130 | 296 | 189 | 374 | 1.90e-11 | 65.1 |
Find 58 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTGGTATTATTACCTTTA+GGG | 0.175810 | 2.4:-45507826 | None:intergenic |
| ATGTCCATTCTTTCTCAATT+TGG | 0.219429 | 2.4:+45507695 | MS.gene85315:CDS |
| CAATTTGGTGGTGCTGGATT+TGG | 0.235870 | 2.4:+45507710 | MS.gene85315:CDS |
| TGTGTGAAGGTATCTAAATT+AGG | 0.258690 | 2.4:-45509230 | None:intergenic |
| CTTTCTCAATTTGGTGGTGC+TGG | 0.290029 | 2.4:+45507704 | MS.gene85315:CDS |
| TCGACGGTTGGACCACGTTT+AGG | 0.337097 | 2.4:+45509543 | MS.gene85315:CDS |
| ATATCGTTTCATGCTATAAT+CGG | 0.339042 | 2.4:-45509399 | None:intergenic |
| CTGCAAGCATCGACATCATT+TGG | 0.358983 | 2.4:-45509187 | None:intergenic |
| GTGTGAAGGTATCTAAATTA+GGG | 0.360779 | 2.4:-45509229 | None:intergenic |
| AACTGAATTTGAGTTTCTTA+AGG | 0.368379 | 2.4:+45507613 | MS.gene85315:CDS |
| AAAAGGTCGATTTCCTTCTT+GGG | 0.371455 | 2.4:+45509262 | MS.gene85315:CDS |
| AGAAAACTCTTGCAAGCAAA+TGG | 0.389703 | 2.4:+45509299 | MS.gene85315:CDS |
| TTGAAATCAAGAAGAAGAAA+TGG | 0.391609 | 2.4:+45509459 | MS.gene85315:CDS |
| ATGAATGCCACAATTATTAC+TGG | 0.395362 | 2.4:+45509506 | MS.gene85315:CDS |
| CATGTTATGATAGTGGGTAT+TGG | 0.409412 | 2.4:-45507524 | None:intergenic |
| TCCATTCTTTCTCAATTTGG+TGG | 0.412634 | 2.4:+45507698 | MS.gene85315:CDS |
| AATCCATCCATGCATGTCTC+TGG | 0.419659 | 2.4:-45509116 | None:intergenic |
| AAATTCAGTTGCTGCTTTAG+TGG | 0.420241 | 2.4:-45507600 | None:intergenic |
| TTGCTCCATCTGAATTTGTT+GGG | 0.422448 | 2.4:+45507636 | MS.gene85315:CDS |
| CCACAATTATTACTGGTAAT+CGG | 0.426884 | 2.4:+45509513 | MS.gene85315:CDS |
| ACGTTTAGGTCAGCTACATT+TGG | 0.451586 | 2.4:+45509557 | MS.gene85315:CDS |
| GTTGCTCCATCTGAATTTGT+TGG | 0.452464 | 2.4:+45507635 | MS.gene85315:CDS |
| TTTCCTCTGATGCACTGACT+TGG | 0.456892 | 2.4:+45507783 | MS.gene85315:CDS |
| GAAAACTCTTGCAAGCAAAT+GGG | 0.459250 | 2.4:+45509300 | MS.gene85315:CDS |
| GAATGTGCATGTTATGATAG+TGG | 0.463870 | 2.4:-45507531 | None:intergenic |
| GTAGGTAAGCATAATAGTAC+TGG | 0.474157 | 2.4:+45509044 | MS.gene85315:intron |
| AATTCAGTTGCTGCTTTAGT+GGG | 0.485440 | 2.4:-45507599 | None:intergenic |
| GAGAGTCAATTAGTGTCTAC+TGG | 0.485673 | 2.4:+45509158 | MS.gene85315:CDS |
| TTTGTTGAAGAAAGAGCCAT+TGG | 0.496653 | 2.4:-45507476 | None:intergenic |
| ACATGCATGGATGGATTTGA+AGG | 0.518569 | 2.4:+45509122 | MS.gene85315:CDS |
| ACCACCAAATTGAGAAAGAA+TGG | 0.519567 | 2.4:-45507699 | None:intergenic |
| GTCGTTGCTACCGATGGGAG+CGG | 0.520579 | 2.4:+45509338 | MS.gene85315:CDS |
| GATGTTGTCGTTGCTACCGA+TGG | 0.521551 | 2.4:+45509332 | MS.gene85315:CDS |
| TATCGTTTCATGCTATAATC+GGG | 0.533377 | 2.4:-45509398 | None:intergenic |
| TCTGCTGCTCAAAACCCTAA+AGG | 0.536955 | 2.4:+45507812 | MS.gene85315:CDS |
| AGACCAAGTCAGTGCATCAG+AGG | 0.552488 | 2.4:-45507786 | None:intergenic |
| AATCCAGAGACATGCATGGA+TGG | 0.553107 | 2.4:+45509113 | MS.gene85315:CDS |
| GGTAAAATTCCCGCTCCCAT+CGG | 0.563517 | 2.4:-45509348 | None:intergenic |
| GCATCGACATCATTTGGCTT+AGG | 0.572206 | 2.4:-45509181 | None:intergenic |
| TCGTTGCTACCGATGGGAGC+GGG | 0.578585 | 2.4:+45509339 | MS.gene85315:CDS |
| ATGTTGTCGTTGCTACCGAT+GGG | 0.579776 | 2.4:+45509333 | MS.gene85315:CDS |
| GGAGCACTAGCACATAGTGC+TGG | 0.581300 | 2.4:-45507578 | None:intergenic |
| AAATGGAATCTCATGATGGT+CGG | 0.582827 | 2.4:+45509476 | MS.gene85315:CDS |
| ATCGGAGCTTCATCGACGGT+TGG | 0.586004 | 2.4:+45509531 | MS.gene85315:CDS |
| AAAACTCTTGCAAGCAAATG+GGG | 0.592783 | 2.4:+45509301 | MS.gene85315:CDS |
| CCGATTACCAGTAATAATTG+TGG | 0.594114 | 2.4:-45509513 | None:intergenic |
| AATCTCATGATGGTCGGAGA+TGG | 0.595084 | 2.4:+45509482 | MS.gene85315:CDS |
| AATGTGCATGTTATGATAGT+GGG | 0.596818 | 2.4:-45507530 | None:intergenic |
| GAAGAAATGGAATCTCATGA+TGG | 0.602603 | 2.4:+45509472 | MS.gene85315:CDS |
| GGGACAGTGCAAGATGTAGT+TGG | 0.605878 | 2.4:+45507656 | MS.gene85315:CDS |
| GATGGATTTGAAGGTACAAG+TGG | 0.633176 | 2.4:+45509131 | MS.gene85315:CDS |
| TGCAAATCCAGAGACATGCA+TGG | 0.637742 | 2.4:+45509109 | MS.gene85315:CDS |
| ATGCACCGCATCCATCACCT+TGG | 0.654708 | 2.4:-45509369 | None:intergenic |
| ACTGTCCCAACAAATTCAGA+TGG | 0.656011 | 2.4:-45507641 | None:intergenic |
| TATGTGATATACGTAAAGAG+AGG | 0.672031 | 2.4:+45509419 | MS.gene85315:CDS |
| TGAACTCTGATGTGAGAACA+TGG | 0.674307 | 2.4:+45509072 | MS.gene85315:CDS |
| GGTAATCGGAGCTTCATCGA+CGG | 0.685148 | 2.4:+45509527 | MS.gene85315:CDS |
| AAATGTAGCTGACCTAAACG+TGG | 0.753682 | 2.4:-45509555 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATAAAAATACTAG+AGG | + | chr2.4:45508756-45508775 | MS.gene85315:intron | 10.0% |
| !! | AACTGTTATATTATAGTTAT+TGG | - | chr2.4:45508915-45508934 | None:intergenic | 15.0% |
| !! | CTAAAATAATGACAATTAAA+GGG | - | chr2.4:45508571-45508590 | None:intergenic | 15.0% |
| !!! | AGAAATAACTATTTTTTTAC+AGG | - | chr2.4:45508151-45508170 | None:intergenic | 15.0% |
| !!! | ATTCCATTTAATTTAACAAT+GGG | + | chr2.4:45508052-45508071 | MS.gene85315:intron | 15.0% |
| !!! | TATTCCATTTAATTTAACAA+TGG | + | chr2.4:45508051-45508070 | MS.gene85315:intron | 15.0% |
| !!! | TCTAAAATAATGACAATTAA+AGG | - | chr2.4:45508572-45508591 | None:intergenic | 15.0% |
| !!! | TTTAGGTCATTTTTAAATAA+GGG | + | chr2.4:45508979-45508998 | MS.gene85315:intron | 15.0% |
| !! | AATCCCATTGTTAAATTAAA+TGG | - | chr2.4:45508058-45508077 | None:intergenic | 20.0% |
| !! | TCTAACATGGATAAATAAAA+TGG | + | chr2.4:45507971-45507990 | MS.gene85315:intron | 20.0% |
| !!! | CTTTAGGTCATTTTTAAATA+AGG | + | chr2.4:45508978-45508997 | MS.gene85315:intron | 20.0% |
| !!! | TAATTAATTTGTTACCACTT+TGG | + | chr2.4:45507930-45507949 | MS.gene85315:intron | 20.0% |
| ! | AAAAAGAGAAACAAAAAGTC+AGG | + | chr2.4:45508869-45508888 | MS.gene85315:intron | 25.0% |
| ! | AAAAGAGAAACAAAAAGTCA+GGG | + | chr2.4:45508870-45508889 | MS.gene85315:intron | 25.0% |
| ! | ATATCGTTTCATGCTATAAT+CGG | - | chr2.4:45509402-45509421 | None:intergenic | 25.0% |
| ! | TTCACACAAAAAGAACAAAA+AGG | + | chr2.4:45509245-45509264 | MS.gene85315:CDS | 25.0% |
| ! | TTGAAATCAAGAAGAAGAAA+TGG | + | chr2.4:45509459-45509478 | MS.gene85315:CDS | 25.0% |
| !! | AAAAGATATAAGCTTTTGCA+TGG | - | chr2.4:45508004-45508023 | None:intergenic | 25.0% |
| !! | AACTGAATTTGAGTTTCTTA+AGG | + | chr2.4:45507613-45507632 | MS.gene85315:CDS | 25.0% |
| !! | TTTTTGTTCTTTTTGTGTGA+AGG | - | chr2.4:45509246-45509265 | None:intergenic | 25.0% |
| !!! | TTCTTTGTTTTGCGAAATTT+AGG | + | chr2.4:45508167-45508186 | MS.gene85315:intron | 25.0% |
| !!! | TTTTTTTTGGCTCTAATTGT+AGG | + | chr2.4:45509026-45509045 | MS.gene85315:intron | 25.0% |
| AATGTGCATGTTATGATAGT+GGG | - | chr2.4:45507533-45507552 | None:intergenic | 30.0% | |
| ACACATGAATAGAAAGTAAG+CGG | - | chr2.4:45507866-45507885 | None:intergenic | 30.0% | |
| AGATAAGCTGGTGAATAATT+TGG | - | chr2.4:45508539-45508558 | None:intergenic | 30.0% | |
| ATAGTTATCATGCTTGAGAT+TGG | - | chr2.4:45508204-45508223 | None:intergenic | 30.0% | |
| ATGAATGCCACAATTATTAC+TGG | + | chr2.4:45509506-45509525 | MS.gene85315:CDS | 30.0% | |
| ATGTCCATTCTTTCTCAATT+TGG | + | chr2.4:45507695-45507714 | MS.gene85315:CDS | 30.0% | |
| CCACAATTATTACTGGTAAT+CGG | + | chr2.4:45509513-45509532 | MS.gene85315:CDS | 30.0% | |
| GATAAGCTGGTGAATAATTT+GGG | - | chr2.4:45508538-45508557 | None:intergenic | 30.0% | |
| GATACGACTAATTTATCCAA+AGG | - | chr2.4:45508030-45508049 | None:intergenic | 30.0% | |
| TATCGTTTCATGCTATAATC+GGG | - | chr2.4:45509401-45509420 | None:intergenic | 30.0% | |
| TATGTGATATACGTAAAGAG+AGG | + | chr2.4:45509419-45509438 | MS.gene85315:CDS | 30.0% | |
| TGAAGTTTCAATTCGACTTT+AGG | + | chr2.4:45508962-45508981 | MS.gene85315:intron | 30.0% | |
| TGGGATTTACTGATCTAATA+TGG | + | chr2.4:45508071-45508090 | MS.gene85315:intron | 30.0% | |
| TTACATTTACCTAAGTGATG+TGG | + | chr2.4:45508240-45508259 | MS.gene85315:intron | 30.0% | |
| !! | AATCAAGGTTTTGTCTAACA+TGG | + | chr2.4:45507958-45507977 | MS.gene85315:intron | 30.0% |
| !! | CTTTTCTTTTTTCGCTAAGT+TGG | + | chr2.4:45508433-45508452 | MS.gene85315:intron | 30.0% |
| !! | GTGTGAAGGTATCTAAATTA+GGG | - | chr2.4:45509232-45509251 | None:intergenic | 30.0% |
| !! | TGTGTGAAGGTATCTAAATT+AGG | - | chr2.4:45509233-45509252 | None:intergenic | 30.0% |
| !! | TTACCCATTTTTATTACGAC+CGG | + | chr2.4:45508389-45508408 | MS.gene85315:intron | 30.0% |
| AAAACTCTTGCAAGCAAATG+GGG | + | chr2.4:45509301-45509320 | MS.gene85315:CDS | 35.0% | |
| AAAAGCAGAGTTCTATGTAG+AGG | - | chr2.4:45508418-45508437 | None:intergenic | 35.0% | |
| AAATGGAATCTCATGATGGT+CGG | + | chr2.4:45509476-45509495 | MS.gene85315:CDS | 35.0% | |
| ACCACCAAATTGAGAAAGAA+TGG | - | chr2.4:45507702-45507721 | None:intergenic | 35.0% | |
| ACCTTGATTATAAGCCAAAG+TGG | - | chr2.4:45507947-45507966 | None:intergenic | 35.0% | |
| ACGACTAATTTATCCAAAGG+TGG | - | chr2.4:45508027-45508046 | None:intergenic | 35.0% | |
| AGAAAACTCTTGCAAGCAAA+TGG | + | chr2.4:45509299-45509318 | MS.gene85315:CDS | 35.0% | |
| CCGATTACCAGTAATAATTG+TGG | - | chr2.4:45509516-45509535 | None:intergenic | 35.0% | |
| CGCTGGTATTATTACCTTTA+GGG | - | chr2.4:45507829-45507848 | None:intergenic | 35.0% | |
| CTCAAGCATGATAACTATGT+TGG | + | chr2.4:45508206-45508225 | MS.gene85315:intron | 35.0% | |
| GAAAACTCTTGCAAGCAAAT+GGG | + | chr2.4:45509300-45509319 | MS.gene85315:CDS | 35.0% | |
| GAAGAAATGGAATCTCATGA+TGG | + | chr2.4:45509472-45509491 | MS.gene85315:CDS | 35.0% | |
| GAATGTGCATGTTATGATAG+TGG | - | chr2.4:45507534-45507553 | None:intergenic | 35.0% | |
| GGGAATCAAAATAGATAAGC+TGG | - | chr2.4:45508551-45508570 | None:intergenic | 35.0% | |
| GTAGGTAAGCATAATAGTAC+TGG | + | chr2.4:45509044-45509063 | MS.gene85315:intron | 35.0% | |
| TAATACTTCTGTCCCTATCA+TGG | - | chr2.4:45508290-45508309 | None:intergenic | 35.0% | |
| TCCATTCTTTCTCAATTTGG+TGG | + | chr2.4:45507698-45507717 | MS.gene85315:CDS | 35.0% | |
| TCGCTGGTATTATTACCTTT+AGG | - | chr2.4:45507830-45507849 | None:intergenic | 35.0% | |
| ! | AAAAAGGTCGATTTCCTTCT+TGG | + | chr2.4:45509261-45509280 | MS.gene85315:CDS | 35.0% |
| ! | AAAAGGTCGATTTCCTTCTT+GGG | + | chr2.4:45509262-45509281 | MS.gene85315:CDS | 35.0% |
| ! | ACCACTTTGGCTTATAATCA+AGG | + | chr2.4:45507943-45507962 | MS.gene85315:intron | 35.0% |
| ! | GCTTATATCTTTTCCACCTT+TGG | + | chr2.4:45508011-45508030 | MS.gene85315:intron | 35.0% |
| ! | TATGGAAACTAGCTTATGCA+TGG | + | chr2.4:45508089-45508108 | MS.gene85315:intron | 35.0% |
| ! | TCATCTCTTTTAACCCAAGA+AGG | - | chr2.4:45509278-45509297 | None:intergenic | 35.0% |
| ! | TTGCTCCATCTGAATTTGTT+GGG | + | chr2.4:45507636-45507655 | MS.gene85315:CDS | 35.0% |
| !! | AAATTCAGTTGCTGCTTTAG+TGG | - | chr2.4:45507603-45507622 | None:intergenic | 35.0% |
| !! | AATTCAGTTGCTGCTTTAGT+GGG | - | chr2.4:45507602-45507621 | None:intergenic | 35.0% |
| !! | CATGTTATGATAGTGGGTAT+TGG | - | chr2.4:45507527-45507546 | None:intergenic | 35.0% |
| !! | TACCCATTTTTATTACGACC+GGG | + | chr2.4:45508390-45508409 | MS.gene85315:intron | 35.0% |
| AAATGTAGCTGACCTAAACG+TGG | - | chr2.4:45509558-45509577 | None:intergenic | 40.0% | |
| ACGTTTAGGTCAGCTACATT+TGG | + | chr2.4:45509557-45509576 | MS.gene85315:CDS | 40.0% | |
| ACTGTCCCAACAAATTCAGA+TGG | - | chr2.4:45507644-45507663 | None:intergenic | 40.0% | |
| GAGAGTCAATTAGTGTCTAC+TGG | + | chr2.4:45509158-45509177 | MS.gene85315:CDS | 40.0% | |
| GTTGCTCCATCTGAATTTGT+TGG | + | chr2.4:45507635-45507654 | MS.gene85315:CDS | 40.0% | |
| TCCCCGGTCGTAATAAAAAT+GGG | - | chr2.4:45508395-45508414 | None:intergenic | 40.0% | |
| TGAACTCTGATGTGAGAACA+TGG | + | chr2.4:45509072-45509091 | MS.gene85315:CDS | 40.0% | |
| ! | ACATGCATGGATGGATTTGA+AGG | + | chr2.4:45509122-45509141 | MS.gene85315:CDS | 40.0% |
| ! | GATGGATTTGAAGGTACAAG+TGG | + | chr2.4:45509131-45509150 | MS.gene85315:CDS | 40.0% |
| !! | ACCCATTTTTATTACGACCG+GGG | + | chr2.4:45508391-45508410 | MS.gene85315:intron | 40.0% |
| !! | GTTAGCTTGTGACCATGATA+GGG | + | chr2.4:45508275-45508294 | MS.gene85315:intron | 40.0% |
| !!! | TTTTACCAAGGTGATGGATG+CGG | + | chr2.4:45509364-45509383 | MS.gene85315:CDS | 40.0% |
| AATCCAGAGACATGCATGGA+TGG | + | chr2.4:45509113-45509132 | MS.gene85315:CDS | 45.0% | |
| AATCCATCCATGCATGTCTC+TGG | - | chr2.4:45509119-45509138 | None:intergenic | 45.0% | |
| AATCTCATGATGGTCGGAGA+TGG | + | chr2.4:45509482-45509501 | MS.gene85315:CDS | 45.0% | |
| ACTCACACACCACATCACTT+AGG | - | chr2.4:45508252-45508271 | None:intergenic | 45.0% | |
| ATGTTGTCGTTGCTACCGAT+GGG | + | chr2.4:45509333-45509352 | MS.gene85315:CDS | 45.0% | |
| GTCCCCGGTCGTAATAAAAA+TGG | - | chr2.4:45508396-45508415 | None:intergenic | 45.0% | |
| TCTGCTGCTCAAAACCCTAA+AGG | + | chr2.4:45507812-45507831 | MS.gene85315:CDS | 45.0% | |
| TGCAAATCCAGAGACATGCA+TGG | + | chr2.4:45509109-45509128 | MS.gene85315:CDS | 45.0% | |
| ! | CGGGAATTTTACCAAGGTGA+TGG | + | chr2.4:45509358-45509377 | MS.gene85315:CDS | 45.0% |
| ! | GCATCGACATCATTTGGCTT+AGG | - | chr2.4:45509184-45509203 | None:intergenic | 45.0% |
| !! | CAATTTGGTGGTGCTGGATT+TGG | + | chr2.4:45507710-45507729 | MS.gene85315:CDS | 45.0% |
| !! | CTGCAAGCATCGACATCATT+TGG | - | chr2.4:45509190-45509209 | None:intergenic | 45.0% |
| !! | CTTTCTCAATTTGGTGGTGC+TGG | + | chr2.4:45507704-45507723 | MS.gene85315:CDS | 45.0% |
| !! | GGTTAGCTTGTGACCATGAT+AGG | + | chr2.4:45508274-45508293 | MS.gene85315:intron | 45.0% |
| !! | TTTCCTCTGATGCACTGACT+TGG | + | chr2.4:45507783-45507802 | MS.gene85315:CDS | 45.0% |
| !!! | TTTAGGGTTTTGAGCAGCAG+AGG | - | chr2.4:45507813-45507832 | None:intergenic | 45.0% |
| !! | ATTATTATTATTATTATTGA+TGG | + | chr2.4:45508684-45508703 | MS.gene85315:intron | 5.0% |
| !!! | AAAATATTAATACTTTTTTT+TGG | + | chr2.4:45509013-45509032 | MS.gene85315:intron | 5.0% |
| AGACCAAGTCAGTGCATCAG+AGG | - | chr2.4:45507789-45507808 | None:intergenic | 50.0% | |
| AGTGATGTGGTGTGTGAGTG+AGG | + | chr2.4:45508253-45508272 | MS.gene85315:intron | 50.0% | |
| GAGTTCTATGTAGAGGTCCC+CGG | - | chr2.4:45508411-45508430 | None:intergenic | 50.0% | |
| GATGTTGTCGTTGCTACCGA+TGG | + | chr2.4:45509332-45509351 | MS.gene85315:CDS | 50.0% | |
| GGGACAGTGCAAGATGTAGT+TGG | + | chr2.4:45507656-45507675 | MS.gene85315:CDS | 50.0% | |
| GGTAAAATTCCCGCTCCCAT+CGG | - | chr2.4:45509351-45509370 | None:intergenic | 50.0% | |
| GGTAATCGGAGCTTCATCGA+CGG | + | chr2.4:45509527-45509546 | MS.gene85315:CDS | 50.0% | |
| ! | TGGGAGCGGGAATTTTACCA+AGG | + | chr2.4:45509352-45509371 | MS.gene85315:CDS | 50.0% |
| ATCGGAGCTTCATCGACGGT+TGG | + | chr2.4:45509531-45509550 | MS.gene85315:CDS | 55.0% | |
| ATGCACCGCATCCATCACCT+TGG | - | chr2.4:45509372-45509391 | None:intergenic | 55.0% | |
| TCGACGGTTGGACCACGTTT+AGG | + | chr2.4:45509543-45509562 | MS.gene85315:CDS | 55.0% | |
| ! | GGAGCACTAGCACATAGTGC+TGG | - | chr2.4:45507581-45507600 | None:intergenic | 55.0% |
| CGGACAACAAGTTGCGTCGC+TGG | - | chr2.4:45507846-45507865 | None:intergenic | 60.0% | |
| GTCGTTGCTACCGATGGGAG+CGG | + | chr2.4:45509338-45509357 | MS.gene85315:CDS | 60.0% | |
| TCGTTGCTACCGATGGGAGC+GGG | + | chr2.4:45509339-45509358 | MS.gene85315:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 45507479 | 45509589 | 45507479 | ID=MS.gene85315 |
| chr2.4 | mRNA | 45507479 | 45509589 | 45507479 | ID=MS.gene85315.t1;Parent=MS.gene85315 |
| chr2.4 | exon | 45507479 | 45507833 | 45507479 | ID=MS.gene85315.t1.exon1;Parent=MS.gene85315.t1 |
| chr2.4 | CDS | 45507479 | 45507833 | 45507479 | ID=cds.MS.gene85315.t1;Parent=MS.gene85315.t1 |
| chr2.4 | exon | 45509048 | 45509589 | 45509048 | ID=MS.gene85315.t1.exon2;Parent=MS.gene85315.t1 |
| chr2.4 | CDS | 45509048 | 45509589 | 45509048 | ID=cds.MS.gene85315.t1;Parent=MS.gene85315.t1 |
| Gene Sequence |
| Protein sequence |
