Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88378.t1 | XP_003596489.2 | 97.9 | 673 | 14 | 0 | 1 | 673 | 1 | 673 | 0.00E+00 | 1315.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88378.t1 | Q7T0Q5 | 42.0 | 529 | 281 | 8 | 11 | 532 | 4 | 513 | 2.1e-118 | 427.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88378.t1 | G7IR59 | 97.9 | 673 | 14 | 0 | 1 | 673 | 1 | 673 | 0.0e+00 | 1315.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52173 | MS.gene88378 | PPI |
| MS.gene023799 | MS.gene88378 | PPI |
| MS.gene048301 | MS.gene88378 | PPI |
| MS.gene010167 | MS.gene88378 | PPI |
| MS.gene94401 | MS.gene88378 | PPI |
| MS.gene030707 | MS.gene88378 | PPI |
| MS.gene42236 | MS.gene88378 | PPI |
| MS.gene043898 | MS.gene88378 | PPI |
| MS.gene80908 | MS.gene88378 | PPI |
| MS.gene050069 | MS.gene88378 | PPI |
| MS.gene88378 | MS.gene70303 | PPI |
| MS.gene27648 | MS.gene88378 | PPI |
| MS.gene023154 | MS.gene88378 | PPI |
| MS.gene02854 | MS.gene88378 | PPI |
| MS.gene64140 | MS.gene88378 | PPI |
| MS.gene28161 | MS.gene88378 | PPI |
| MS.gene36492 | MS.gene88378 | PPI |
| MS.gene88378 | MS.gene29448 | PPI |
| MS.gene59369 | MS.gene88378 | PPI |
| MS.gene012655 | MS.gene88378 | PPI |
| MS.gene35157 | MS.gene88378 | PPI |
| MS.gene88378 | MS.gene003175 | PPI |
| MS.gene89206 | MS.gene88378 | PPI |
| MS.gene017434 | MS.gene88378 | PPI |
| MS.gene76962 | MS.gene88378 | PPI |
| MS.gene042172 | MS.gene88378 | PPI |
| MS.gene028300 | MS.gene88378 | PPI |
| MS.gene01984 | MS.gene88378 | PPI |
| MS.gene26077 | MS.gene88378 | PPI |
| MS.gene68942 | MS.gene88378 | PPI |
| MS.gene58159 | MS.gene88378 | PPI |
| MS.gene54525 | MS.gene88378 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88378.t1 | MTR_2g081080 | 97.674 | 688 | 15 | 1 | 1 | 687 | 1 | 688 | 0.0 | 1390 |
| MS.gene88378.t1 | MTR_8g007595 | 93.878 | 49 | 3 | 0 | 371 | 419 | 1 | 49 | 1.85e-26 | 103 |
| MS.gene88378.t1 | MTR_8g007590 | 91.667 | 36 | 3 | 0 | 274 | 309 | 60 | 95 | 1.20e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88378.t1 | AT3G56990 | 62.481 | 669 | 238 | 6 | 8 | 666 | 8 | 673 | 0.0 | 802 |
| MS.gene88378.t1 | AT3G56990 | 63.870 | 584 | 200 | 5 | 1 | 576 | 1 | 581 | 0.0 | 715 |
| MS.gene88378.t1 | AT3G56990 | 66.862 | 513 | 165 | 3 | 1 | 511 | 1 | 510 | 0.0 | 674 |
Find 162 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGCTATATTTACAAATA+AGG | 0.230806 | 2.4:-17247303 | MS.gene88378:intron |
| GCTTCAGGAATTTGAGATTA+AGG | 0.244177 | 2.4:-17246885 | MS.gene88378:intron |
| AGCAGCATGCAGAGGCATTT+TGG | 0.250491 | 2.4:-17246436 | MS.gene88378:CDS |
| AACAACCTTCACTTGCTTCA+TGG | 0.261438 | 2.4:-17257093 | MS.gene88378:CDS |
| TAATTATAAATTATACAAAA+AGG | 0.262295 | 2.4:-17249006 | MS.gene88378:intron |
| ATAAATCTACACGCAAAATA+TGG | 0.264475 | 2.4:-17255061 | MS.gene88378:CDS |
| ATGTAGGATGTATGAAATTA+AGG | 0.283564 | 2.4:-17246462 | MS.gene88378:intron |
| TGGTGATGGGGACTTCTTAA+TGG | 0.294184 | 2.4:-17252076 | MS.gene88378:CDS |
| AATGGCCGTGGGCGTGGCCG+TGG | 0.307651 | 2.4:-17246167 | MS.gene88378:CDS |
| ATCTATATCATCTTCATTGT+AGG | 0.311074 | 2.4:+17246259 | None:intergenic |
| ATAAAATCAACATCAATAAA+TGG | 0.322181 | 2.4:-17257142 | MS.gene88378:CDS |
| TGAAGATGTTGAAACTAAAA+AGG | 0.328340 | 2.4:-17247378 | MS.gene88378:CDS |
| ATTAAAGTTTGAACGACATT+TGG | 0.328405 | 2.4:-17255916 | MS.gene88378:CDS |
| GTATGATGTAAGATGGTATT+TGG | 0.332590 | 2.4:+17249308 | None:intergenic |
| ATAAACACGTCGTTAGGATA+TGG | 0.333831 | 2.4:-17251288 | MS.gene88378:CDS |
| TAACCTTCACTTCGAGAAAC+AGG | 0.336840 | 2.4:-17246286 | MS.gene88378:CDS |
| GGCCGTGGGCGTGGCCGTGG+GGG | 0.339582 | 2.4:-17246164 | MS.gene88378:CDS |
| TTCTAGAGAAGAACACCATT+TGG | 0.353343 | 2.4:+17249267 | None:intergenic |
| TCATTTATTTCTCCTGTTGT+CGG | 0.356159 | 2.4:+17249382 | None:intergenic |
| TCGCAGGGACCAGTATTTAA+TGG | 0.356179 | 2.4:-17246185 | MS.gene88378:CDS |
| GGAGGACTCTGAAGAATATC+TGG | 0.364480 | 2.4:-17246864 | MS.gene88378:CDS |
| GGTGAATTCATCATTGCTTC+AGG | 0.364506 | 2.4:-17256859 | MS.gene88378:intron |
| AAGTAAAAGTGTACGAAGTC+AGG | 0.367205 | 2.4:-17255947 | MS.gene88378:CDS |
| TGAGATTGTTGTTTCTTAGT+TGG | 0.368706 | 2.4:+17257067 | None:intergenic |
| ATGGCCGTGGGCGTGGCCGT+GGG | 0.375951 | 2.4:-17246166 | MS.gene88378:CDS |
| ATGCCACTTTATGTCCAATA+TGG | 0.380088 | 2.4:+17251351 | None:intergenic |
| TGGTTTGATCCTGTTGGCCT+TGG | 0.386013 | 2.4:-17249338 | MS.gene88378:CDS |
| TGCAAGGAGCCGATTAACTT+TGG | 0.388741 | 2.4:+17247451 | None:intergenic |
| ATTCTTGCAGGCAGAAGATA+TGG | 0.388891 | 2.4:-17247688 | MS.gene88378:intron |
| GAAAATTACCCAAAGTTAAT+CGG | 0.392408 | 2.4:-17247460 | MS.gene88378:CDS |
| AAGAGGGGAGTTCAATCCTT+AGG | 0.397670 | 2.4:-17246215 | MS.gene88378:CDS |
| ATCCTTAGGGCTCAAGTCGC+AGG | 0.398326 | 2.4:-17246201 | MS.gene88378:CDS |
| AAGTTAATTCTGTAAAGATC+TGG | 0.399285 | 2.4:+17253314 | None:intergenic |
| TCCTGTTGTCGGCTCAATGC+TGG | 0.400598 | 2.4:+17249393 | None:intergenic |
| TGCAACTCATTGAAGATTTG+AGG | 0.402674 | 2.4:-17256921 | MS.gene88378:CDS |
| ATCAGTTCACAAACCGTGTC+AGG | 0.421583 | 2.4:+17251262 | None:intergenic |
| GGCTGCAGTCCAAGGCCAAC+AGG | 0.425887 | 2.4:+17249329 | None:intergenic |
| TCTAGAGAAGAACACCATTT+GGG | 0.426444 | 2.4:+17249268 | None:intergenic |
| TAAGTACATTGGTGCCAATC+AGG | 0.429942 | 2.4:+17249054 | None:intergenic |
| TTTCAGCATCTTCAGTTTCA+AGG | 0.431931 | 2.4:+17247420 | None:intergenic |
| ACCAGCATTGAGCCGACAAC+AGG | 0.432509 | 2.4:-17249394 | MS.gene88378:CDS |
| GCAAGGAGCCGATTAACTTT+GGG | 0.437654 | 2.4:+17247452 | None:intergenic |
| GAAGAACACCATTTGGGAAC+AGG | 0.442657 | 2.4:+17249274 | None:intergenic |
| GTCACAGCATTGGAGTTTGA+TGG | 0.446036 | 2.4:-17252096 | MS.gene88378:CDS |
| TATTCCACGTGGTGTTAAGC+AGG | 0.446998 | 2.4:-17246330 | MS.gene88378:CDS |
| GTATTTAATGGCCGTGGGCG+TGG | 0.447358 | 2.4:-17246173 | MS.gene88378:CDS |
| AGATGAGGAATCACTTCCTA+TGG | 0.449297 | 2.4:-17246396 | MS.gene88378:CDS |
| AATGACGTGTGTACATTTCC+TGG | 0.450259 | 2.4:-17249364 | MS.gene88378:CDS |
| GGCCGTGGGAGAGGGAACCG+TGG | 0.451384 | 2.4:-17246140 | MS.gene88378:CDS |
| TTAAATTTGACCCACCTGAT+TGG | 0.454057 | 2.4:-17249068 | MS.gene88378:CDS |
| CGCCCACGGCCATTAAATAC+TGG | 0.456545 | 2.4:+17246176 | None:intergenic |
| AAAGCAAACATCCTTGTTGA+AGG | 0.459302 | 2.4:-17246819 | MS.gene88378:CDS |
| CCCTCGGACCTGTTCCCAAA+TGG | 0.462240 | 2.4:-17249282 | MS.gene88378:CDS |
| TGGCCGTGGGCGTGGCCGTG+GGG | 0.465888 | 2.4:-17246165 | MS.gene88378:CDS |
| CAGGTATGGCAGCTCCATAT+TGG | 0.466470 | 2.4:-17251365 | MS.gene88378:CDS |
| GGACCAGTATTTAATGGCCG+TGG | 0.469990 | 2.4:-17246179 | MS.gene88378:CDS |
| AGTTAATTCTGTAAAGATCT+GGG | 0.470648 | 2.4:+17253315 | None:intergenic |
| GGGGACTTCTTAATGGCTGT+TGG | 0.471771 | 2.4:-17252069 | MS.gene88378:CDS |
| GCCGTGGGAGAGGGAACCGT+GGG | 0.477546 | 2.4:-17246139 | MS.gene88378:CDS |
| GTGTACGAAGTCAGGGAGCT+TGG | 0.477825 | 2.4:-17255939 | MS.gene88378:CDS |
| AGCACCATCTTCACCGCCAC+AGG | 0.486882 | 2.4:+17252705 | None:intergenic |
| TTATCACTAGTTATCAACTT+TGG | 0.487261 | 2.4:+17251307 | None:intergenic |
| TAAACACGTCGTTAGGATAT+GGG | 0.490685 | 2.4:-17251287 | MS.gene88378:CDS |
| CGTGGTGTTAAGCAGGGTCC+TGG | 0.492480 | 2.4:-17246323 | MS.gene88378:CDS |
| CTAGTGATAAACACGTCGTT+AGG | 0.494359 | 2.4:-17251294 | MS.gene88378:CDS |
| TGGTAGTGGTTTGATCCTGT+TGG | 0.494517 | 2.4:-17249344 | MS.gene88378:CDS |
| TGAACGGGCCTCAAGAATTA+CGG | 0.495878 | 2.4:-17247607 | MS.gene88378:intron |
| TTCTTCTCTAGAAAATTTCA+CGG | 0.496814 | 2.4:-17249257 | MS.gene88378:intron |
| GTGTGTACATTTCCTGGTAG+TGG | 0.498687 | 2.4:-17249358 | MS.gene88378:CDS |
| TTTACAGGAGGAACTAGAGA+TGG | 0.498860 | 2.4:-17249150 | MS.gene88378:intron |
| TTACAGAATTAACTTAGAGC+AGG | 0.499324 | 2.4:-17253306 | MS.gene88378:intron |
| GTTGCCTGTGGCGGTGAAGA+TGG | 0.502606 | 2.4:-17252709 | MS.gene88378:CDS |
| GTGGAATATGAGAGGATTGT+CGG | 0.507002 | 2.4:+17246345 | None:intergenic |
| TTTGTAGGAGGTCACAGCAT+TGG | 0.508715 | 2.4:-17252106 | MS.gene88378:intron |
| GTTATTTCCCGTGATCCTCC+AGG | 0.510502 | 2.4:+17246305 | None:intergenic |
| TCTGTAAAGATCTGGGGAAG+AGG | 0.510948 | 2.4:+17253322 | None:intergenic |
| CCGTGGGAGAGGGAACCGTG+GGG | 0.511097 | 2.4:-17246138 | MS.gene88378:CDS |
| AGAGGGGAGTTCAATCCTTA+GGG | 0.512815 | 2.4:-17246214 | MS.gene88378:CDS |
| CGCAGGGGATTGTGTGGTAA+GGG | 0.514378 | 2.4:+17252892 | None:intergenic |
| CGTGGGAGAGGGAACCGTGG+GGG | 0.517971 | 2.4:-17246137 | MS.gene88378:CDS |
| ATGGCTGTTGGAAGTAGTGC+AGG | 0.518835 | 2.4:-17252057 | MS.gene88378:CDS |
| ACGCAGGGGATTGTGTGGTA+AGG | 0.522235 | 2.4:+17252891 | None:intergenic |
| GCATTGGAGTTTGATGGTGA+TGG | 0.526075 | 2.4:-17252090 | MS.gene88378:CDS |
| TGCCCTGTTTCTCGAAGTGA+AGG | 0.527329 | 2.4:+17246283 | None:intergenic |
| GCAATGATGAATTCACCATC+AGG | 0.532354 | 2.4:+17256865 | None:intergenic |
| CATTGGAGTTTGATGGTGAT+GGG | 0.532882 | 2.4:-17252089 | MS.gene88378:CDS |
| TGGTATTTGGCTGCAGTCCA+AGG | 0.533299 | 2.4:+17249321 | None:intergenic |
| GCAGGGTCCTGGAGGATCAC+GGG | 0.533382 | 2.4:-17246312 | MS.gene88378:CDS |
| ATGTGATCTTGTATTCGTAC+AGG | 0.535225 | 2.4:+17251479 | None:intergenic |
| ATATCTGGCTTTGCATCCCA+TGG | 0.541980 | 2.4:-17246849 | MS.gene88378:CDS |
| AAAATTAAAGCCACTCCTGA+TGG | 0.548782 | 2.4:-17256880 | MS.gene88378:CDS |
| GTACTTAGAGCCTACATGCA+TGG | 0.549497 | 2.4:-17249038 | MS.gene88378:CDS |
| TTACAGGAGGAACTAGAGAT+GGG | 0.553975 | 2.4:-17249149 | MS.gene88378:intron |
| TACTTAGAGCCTACATGCAT+GGG | 0.558063 | 2.4:-17249037 | MS.gene88378:CDS |
| TGTTGGAAGTAGTGCAGGAA+AGG | 0.561859 | 2.4:-17252052 | MS.gene88378:intron |
| GCTCCATATTGGACATAAAG+TGG | 0.563734 | 2.4:-17251354 | MS.gene88378:CDS |
| AACAGGATCAAACCACTACC+AGG | 0.565301 | 2.4:+17249346 | None:intergenic |
| AGGGATGGTATGATGTAAGA+TGG | 0.566320 | 2.4:+17249301 | None:intergenic |
| CATCGTACTCTTAACTTCGA+AGG | 0.567572 | 2.4:-17251331 | MS.gene88378:CDS |
| ACCTAGTGGTGATGTTGACC+AGG | 0.571748 | 2.4:-17252626 | MS.gene88378:intron |
| TCTGATGACGATCTAAGTCT+AGG | 0.573071 | 2.4:-17246776 | MS.gene88378:CDS |
| AGCAGGGTCCTGGAGGATCA+CGG | 0.573847 | 2.4:-17246313 | MS.gene88378:CDS |
| GCAACAATGGCGACTCGTGA+CGG | 0.578319 | 2.4:-17257169 | None:intergenic |
| AATAAAGAACCCATGCATGT+AGG | 0.581693 | 2.4:+17249028 | None:intergenic |
| TCCTTAGGGCTCAAGTCGCA+GGG | 0.581719 | 2.4:-17246200 | MS.gene88378:CDS |
| CGTTGAATGTAGTTTGTCGA+AGG | 0.582896 | 2.4:-17252871 | MS.gene88378:intron |
| CTCTTATGACAGGATGGGAA+GGG | 0.589993 | 2.4:-17253387 | MS.gene88378:intron |
| GGGATATTACTTATGACGAC+TGG | 0.593321 | 2.4:-17253367 | MS.gene88378:CDS |
| GACAAACTACATTCAACGCA+GGG | 0.593499 | 2.4:+17252876 | None:intergenic |
| GACCAGTATTTAATGGCCGT+GGG | 0.595509 | 2.4:-17246178 | MS.gene88378:CDS |
| GCTTTCACTCTATCTCCCAT+AGG | 0.600400 | 2.4:+17246380 | None:intergenic |
| TCCCTGCGACTTGAGCCCTA+AGG | 0.602399 | 2.4:+17246199 | None:intergenic |
| GTCGGTAGAATTGATGCTGT+CGG | 0.604072 | 2.4:-17252649 | MS.gene88378:CDS |
| CCCCACGGTTCCCTCTCCCA+CGG | 0.604603 | 2.4:+17246138 | None:intergenic |
| TTTCAAGGAGGCGAGCTGCA+AGG | 0.605240 | 2.4:+17247435 | None:intergenic |
| GATGAGGAATCACTTCCTAT+GGG | 0.605754 | 2.4:-17246395 | MS.gene88378:CDS |
| CCATTTGGGAACAGGTCCGA+GGG | 0.607815 | 2.4:+17249282 | None:intergenic |
| CATGTAGGCTCTAAGTACAT+TGG | 0.608871 | 2.4:+17249043 | None:intergenic |
| GTACAGGACGTGACGAGCGC+AGG | 0.610128 | 2.4:+17251495 | None:intergenic |
| TTGGGAACAGGTCCGAGGGA+TGG | 0.611778 | 2.4:+17249286 | None:intergenic |
| GTACATTGGTGCCAATCAGG+TGG | 0.612449 | 2.4:+17249057 | None:intergenic |
| AGTAAAAGTGTACGAAGTCA+GGG | 0.612654 | 2.4:-17255946 | MS.gene88378:CDS |
| AGGGGATTGTGTGGTAAGGG+AGG | 0.614929 | 2.4:+17252895 | None:intergenic |
| GTTCATGGGTTAGTTGCCTG+TGG | 0.615272 | 2.4:-17252721 | MS.gene88378:CDS |
| TACATTGGTGCCAATCAGGT+GGG | 0.615683 | 2.4:+17249058 | None:intergenic |
| GTTAATTCTGTAAAGATCTG+GGG | 0.615771 | 2.4:+17253316 | None:intergenic |
| CGACAAACTACATTCAACGC+AGG | 0.617047 | 2.4:+17252875 | None:intergenic |
| AGATCGTCATCAGACATGAC+AGG | 0.620660 | 2.4:+17246785 | None:intergenic |
| TCTCTTATGACAGGATGGGA+AGG | 0.621236 | 2.4:-17253388 | MS.gene88378:intron |
| ACCATTTGGGAACAGGTCCG+AGG | 0.621426 | 2.4:+17249281 | None:intergenic |
| ACGAGAAAACTCGAGTTCCA+AGG | 0.622265 | 2.4:-17246712 | MS.gene88378:intron |
| TCTTACATCATACCATCCCT+CGG | 0.623935 | 2.4:-17249298 | MS.gene88378:CDS |
| TTGCAGGCAGAAGATATGGC+GGG | 0.624358 | 2.4:-17247684 | MS.gene88378:intron |
| TCAGGAATTTGAGATTAAGG+AGG | 0.625108 | 2.4:-17246882 | MS.gene88378:intron |
| TTCGAAATGTTCCTTCAACA+AGG | 0.628295 | 2.4:+17246808 | None:intergenic |
| GATGAATTCACCATCAGGAG+TGG | 0.629506 | 2.4:+17256870 | None:intergenic |
| TAGGATATGGGATCCTGACA+CGG | 0.629838 | 2.4:-17251275 | MS.gene88378:intron |
| ATTCAACGCAGGGGATTGTG+TGG | 0.631891 | 2.4:+17252886 | None:intergenic |
| ATTCCACGTGGTGTTAAGCA+GGG | 0.633445 | 2.4:-17246329 | MS.gene88378:CDS |
| AACCTTCACTTCGAGAAACA+GGG | 0.636686 | 2.4:-17246285 | MS.gene88378:CDS |
| TATCTGGCTTTGCATCCCAT+GGG | 0.638341 | 2.4:-17246848 | MS.gene88378:CDS |
| GGAATCCATGAAGCAAGTGA+AGG | 0.643761 | 2.4:+17257088 | None:intergenic |
| CAGCATCTTCAGTTTCAAGG+AGG | 0.644478 | 2.4:+17247423 | None:intergenic |
| CATGGGTTAGTTGCCTGTGG+CGG | 0.647144 | 2.4:-17252718 | MS.gene88378:CDS |
| CCGACTGAAGATCTTACACG+TGG | 0.656759 | 2.4:+17252667 | None:intergenic |
| ACTACAGTTTGCGAATACCA+AGG | 0.656760 | 2.4:-17255033 | MS.gene88378:intron |
| TAAGGATGAGCAGCATGCAG+AGG | 0.657972 | 2.4:-17246444 | MS.gene88378:CDS |
| AACACCACGTGGAATATGAG+AGG | 0.662551 | 2.4:+17246337 | None:intergenic |
| CTTGCAGGCAGAAGATATGG+CGG | 0.663269 | 2.4:-17247685 | MS.gene88378:intron |
| ATTGGAGTTTGATGGTGATG+GGG | 0.664866 | 2.4:-17252088 | MS.gene88378:CDS |
| ACCTGGTCAACATCACCACT+AGG | 0.665008 | 2.4:+17252625 | None:intergenic |
| ATTGATGCTGTCGGACCTAG+TGG | 0.667084 | 2.4:-17252640 | MS.gene88378:CDS |
| GGTGTTAAGCAGGGTCCTGG+AGG | 0.668227 | 2.4:-17246320 | MS.gene88378:CDS |
| ACTATCGACGTCCTCTCCCA+CGG | 0.669645 | 2.4:+17246111 | None:intergenic |
| TGGCGGTGAAGATGGTGCTG+TGG | 0.677877 | 2.4:-17252701 | MS.gene88378:CDS |
| GCAGTCAACCGTAATTCTTG+AGG | 0.678610 | 2.4:+17247599 | None:intergenic |
| CAGGAGGAACTAGAGATGGG+TGG | 0.683257 | 2.4:-17249146 | MS.gene88378:CDS |
| ACAAACTACATTCAACGCAG+GGG | 0.707748 | 2.4:+17252877 | None:intergenic |
| CAATCCTCTCATATTCCACG+TGG | 0.712780 | 2.4:-17246341 | MS.gene88378:CDS |
| GGACCCTGCTTAACACCACG+TGG | 0.717074 | 2.4:+17246326 | None:intergenic |
| CCACGTGTAAGATCTTCAGT+CGG | 0.726845 | 2.4:-17252667 | MS.gene88378:CDS |
| CGACTGAAGATCTTACACGT+GGG | 0.751477 | 2.4:+17252668 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 17246112 | 17257185 | 17246112 | ID=MS.gene88378 |
| chr2.4 | mRNA | 17246112 | 17257185 | 17246112 | ID=MS.gene88378.t1;Parent=MS.gene88378 |
| chr2.4 | exon | 17257053 | 17257185 | 17257053 | ID=MS.gene88378.t1.exon1;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17257053 | 17257185 | 17257053 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17256860 | 17256958 | 17256860 | ID=MS.gene88378.t1.exon2;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17256860 | 17256958 | 17256860 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17255893 | 17255984 | 17255893 | ID=MS.gene88378.t1.exon3;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17255893 | 17255984 | 17255893 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17255034 | 17255134 | 17255034 | ID=MS.gene88378.t1.exon4;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17255034 | 17255134 | 17255034 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17253307 | 17253397 | 17253307 | ID=MS.gene88378.t1.exon5;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17253307 | 17253397 | 17253307 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17252872 | 17252930 | 17252872 | ID=MS.gene88378.t1.exon6;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17252872 | 17252930 | 17252872 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17252627 | 17252747 | 17252627 | ID=MS.gene88378.t1.exon7;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17252627 | 17252747 | 17252627 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17252053 | 17252121 | 17252053 | ID=MS.gene88378.t1.exon8;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17252053 | 17252121 | 17252053 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17251479 | 17251531 | 17251479 | ID=MS.gene88378.t1.exon9;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17251479 | 17251531 | 17251479 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17251276 | 17251384 | 17251276 | ID=MS.gene88378.t1.exon10;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17251276 | 17251384 | 17251276 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17249258 | 17249428 | 17249258 | ID=MS.gene88378.t1.exon11;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17249258 | 17249428 | 17249258 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17249007 | 17249165 | 17249007 | ID=MS.gene88378.t1.exon12;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17249007 | 17249165 | 17249007 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17247608 | 17247700 | 17247608 | ID=MS.gene88378.t1.exon13;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17247608 | 17247700 | 17247608 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17247304 | 17247489 | 17247304 | ID=MS.gene88378.t1.exon14;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17247304 | 17247489 | 17247304 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17246713 | 17246900 | 17246713 | ID=MS.gene88378.t1.exon15;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17246713 | 17246900 | 17246713 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| chr2.4 | exon | 17246112 | 17246478 | 17246112 | ID=MS.gene88378.t1.exon16;Parent=MS.gene88378.t1 |
| chr2.4 | CDS | 17246112 | 17246478 | 17246112 | ID=cds.MS.gene88378.t1;Parent=MS.gene88378.t1 |
| Gene Sequence |
| Protein sequence |
