Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88658.t1 | XP_003610155.1 | 98.9 | 636 | 6 | 1 | 1 | 635 | 1 | 636 | 0.00E+00 | 1246.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88658.t1 | Q9FKL6 | 66.4 | 636 | 194 | 8 | 13 | 635 | 13 | 641 | 1.3e-231 | 803.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88658.t1 | G7JD14 | 98.9 | 636 | 6 | 1 | 1 | 635 | 1 | 636 | 0.0e+00 | 1246.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene88658 | 0.80004 | 1.74E-48 | -1.69E-46 |
| MS.gene04920 | MS.gene88658 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene88658 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene88658 | 0.801489 | 8.79E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene88658 | -0.802767 | 4.80E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene88658 | 0.850351 | 1.80E-60 | -1.69E-46 |
| MS.gene049744 | MS.gene88658 | 0.816519 | 5.31E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene88658 | 0.825557 | 4.39E-54 | -1.69E-46 |
| MS.gene050646 | MS.gene88658 | 0.822876 | 1.87E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene88658 | 0.805175 | 1.52E-49 | -1.69E-46 |
| MS.gene051043 | MS.gene88658 | 0.812269 | 4.62E-51 | -1.69E-46 |
| MS.gene051154 | MS.gene88658 | 0.811136 | 8.14E-51 | -1.69E-46 |
| MS.gene051332 | MS.gene88658 | 0.8168 | 4.59E-52 | -1.69E-46 |
| MS.gene051699 | MS.gene88658 | 0.838324 | 3.08E-57 | -1.69E-46 |
| MS.gene052037 | MS.gene88658 | 0.818185 | 2.24E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene88658 | 0.855484 | 6.12E-62 | -1.69E-46 |
| MS.gene052168 | MS.gene88658 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene88658 | 0.817937 | 2.54E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene88658 | 0.818884 | 1.55E-52 | -1.69E-46 |
| MS.gene053272 | MS.gene88658 | -0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene88658 | 0.809895 | 1.51E-50 | -1.69E-46 |
| MS.gene054178 | MS.gene88658 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene88658 | 0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene88658 | 0.830103 | 3.55E-55 | -1.69E-46 |
| MS.gene054641 | MS.gene88658 | 0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene88658 | 0.804315 | 2.29E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene88658 | 0.85136 | 9.34E-61 | -1.69E-46 |
| MS.gene054893 | MS.gene88658 | 0.847193 | 1.35E-59 | -1.69E-46 |
| MS.gene055229 | MS.gene88658 | 0.818267 | 2.14E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene88658 | 0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene055864 | MS.gene88658 | 0.807661 | 4.53E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene88658 | 0.808011 | 3.82E-50 | -1.69E-46 |
| MS.gene056363 | MS.gene88658 | 0.801221 | 9.97E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene88658 | 0.829122 | 6.14E-55 | -1.69E-46 |
| MS.gene056973 | MS.gene88658 | 0.831511 | 1.60E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene88658 | 0.810187 | 1.31E-50 | -1.69E-46 |
| MS.gene057174 | MS.gene88658 | 0.8091 | 2.24E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene88658 | 0.824964 | 6.07E-54 | -1.69E-46 |
| MS.gene057371 | MS.gene88658 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene88658 | 0.825711 | 4.04E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene88658 | 0.812108 | 5.00E-51 | -1.69E-46 |
| MS.gene058159 | MS.gene88658 | 0.83546 | 1.66E-56 | -1.69E-46 |
| MS.gene058279 | MS.gene88658 | 0.804144 | 2.49E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene88658 | 0.811529 | 6.69E-51 | -1.69E-46 |
| MS.gene058520 | MS.gene88658 | 0.828287 | 9.78E-55 | -1.69E-46 |
| MS.gene058781 | MS.gene88658 | 0.819155 | 1.35E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene88658 | 0.806887 | 6.61E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene88658 | 0.822492 | 2.30E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene88658 | -0.841211 | 5.45E-58 | -1.69E-46 |
| MS.gene060259 | MS.gene88658 | 0.828028 | 1.13E-54 | -1.69E-46 |
| MS.gene060413 | MS.gene88658 | 0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene88658 | 0.80728 | 5.46E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene88658 | 0.813442 | 2.55E-51 | -1.69E-46 |
| MS.gene060785 | MS.gene88658 | 0.846228 | 2.48E-59 | -1.69E-46 |
| MS.gene060933 | MS.gene88658 | 0.847444 | 1.15E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene88658 | 0.833827 | 4.26E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene88658 | 0.854631 | 1.08E-61 | -1.69E-46 |
| MS.gene061100 | MS.gene88658 | 0.818427 | 1.97E-52 | -1.69E-46 |
| MS.gene061188 | MS.gene88658 | 0.841608 | 4.29E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88658.t1 | MTR_4g128600 | 98.899 | 636 | 6 | 1 | 1 | 635 | 1 | 636 | 0.0 | 1291 |
| MS.gene88658.t1 | MTR_2g011810 | 64.984 | 634 | 195 | 10 | 13 | 635 | 16 | 633 | 0.0 | 818 |
| MS.gene88658.t1 | MTR_4g090970 | 64.241 | 632 | 199 | 9 | 13 | 635 | 15 | 628 | 0.0 | 806 |
| MS.gene88658.t1 | MTR_2g450080 | 53.659 | 615 | 226 | 12 | 28 | 634 | 30 | 593 | 0.0 | 615 |
| MS.gene88658.t1 | MTR_6g083730 | 47.815 | 389 | 184 | 8 | 13 | 387 | 4 | 387 | 1.05e-114 | 352 |
| MS.gene88658.t1 | MTR_8g104510 | 48.670 | 376 | 179 | 7 | 21 | 386 | 13 | 384 | 1.06e-112 | 346 |
| MS.gene88658.t1 | MTR_8g104490 | 46.907 | 388 | 187 | 8 | 12 | 386 | 3 | 384 | 5.89e-110 | 340 |
| MS.gene88658.t1 | MTR_4g106810 | 40.122 | 491 | 253 | 10 | 15 | 489 | 2 | 467 | 2.29e-103 | 325 |
| MS.gene88658.t1 | MTR_8g104490 | 48.986 | 296 | 145 | 4 | 93 | 386 | 28 | 319 | 1.26e-94 | 298 |
| MS.gene88658.t1 | MTR_6g083320 | 49.662 | 296 | 136 | 5 | 13 | 296 | 4 | 298 | 3.61e-91 | 288 |
| MS.gene88658.t1 | MTR_7g112000 | 37.464 | 347 | 189 | 11 | 42 | 376 | 31 | 361 | 9.17e-61 | 211 |
| MS.gene88658.t1 | MTR_7g111960 | 32.733 | 333 | 211 | 8 | 52 | 378 | 60 | 385 | 7.13e-43 | 162 |
| MS.gene88658.t1 | MTR_7g111980 | 32.941 | 340 | 207 | 8 | 44 | 376 | 51 | 376 | 1.03e-42 | 162 |
| MS.gene88658.t1 | MTR_7g111980 | 34.021 | 291 | 182 | 6 | 91 | 376 | 8 | 293 | 7.92e-41 | 155 |
| MS.gene88658.t1 | MTR_6g083810 | 41.667 | 132 | 64 | 5 | 13 | 132 | 4 | 134 | 3.76e-20 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88658.t1 | AT5G57580 | 66.614 | 629 | 196 | 7 | 12 | 630 | 12 | 636 | 0.0 | 833 |
| MS.gene88658.t1 | AT2G18750 | 64.448 | 616 | 188 | 7 | 25 | 635 | 30 | 619 | 0.0 | 788 |
| MS.gene88658.t1 | AT2G18750 | 64.448 | 616 | 188 | 7 | 25 | 635 | 30 | 619 | 0.0 | 788 |
| MS.gene88658.t1 | AT2G18750 | 64.448 | 616 | 188 | 7 | 25 | 635 | 30 | 619 | 0.0 | 788 |
| MS.gene88658.t1 | AT4G25800 | 63.166 | 619 | 189 | 11 | 21 | 633 | 9 | 594 | 0.0 | 753 |
| MS.gene88658.t1 | AT4G25800 | 63.166 | 619 | 189 | 11 | 21 | 633 | 9 | 594 | 0.0 | 753 |
| MS.gene88658.t1 | AT2G24300 | 52.000 | 650 | 239 | 15 | 9 | 634 | 3 | 603 | 0.0 | 598 |
| MS.gene88658.t1 | AT2G24300 | 52.006 | 648 | 238 | 15 | 11 | 634 | 1 | 599 | 0.0 | 597 |
| MS.gene88658.t1 | AT2G24300 | 51.010 | 594 | 223 | 13 | 60 | 634 | 8 | 552 | 0.0 | 539 |
| MS.gene88658.t1 | AT4G31000 | 64.075 | 373 | 126 | 3 | 22 | 390 | 18 | 386 | 1.33e-171 | 501 |
| MS.gene88658.t1 | AT4G31000 | 48.039 | 102 | 50 | 2 | 535 | 634 | 462 | 562 | 2.19e-18 | 89.4 |
| MS.gene88658.t1 | AT4G31000 | 54.960 | 373 | 139 | 4 | 22 | 390 | 18 | 365 | 8.77e-138 | 413 |
| MS.gene88658.t1 | AT4G31000 | 48.039 | 102 | 50 | 2 | 535 | 634 | 441 | 541 | 2.18e-18 | 89.4 |
| MS.gene88658.t1 | AT5G62570 | 45.119 | 379 | 193 | 7 | 12 | 386 | 10 | 377 | 2.68e-106 | 331 |
| MS.gene88658.t1 | AT5G62570 | 45.879 | 364 | 182 | 7 | 12 | 371 | 10 | 362 | 1.08e-104 | 322 |
| MS.gene88658.t1 | AT5G62570 | 45.658 | 357 | 183 | 6 | 34 | 386 | 13 | 362 | 2.19e-103 | 323 |
| MS.gene88658.t1 | AT1G73805 | 45.673 | 416 | 199 | 14 | 12 | 414 | 3 | 404 | 1.23e-98 | 309 |
| MS.gene88658.t1 | AT5G62570 | 46.897 | 290 | 140 | 6 | 12 | 298 | 10 | 288 | 1.11e-81 | 260 |
| MS.gene88658.t1 | AT5G26920 | 35.664 | 429 | 247 | 11 | 35 | 453 | 28 | 437 | 1.38e-74 | 249 |
| MS.gene88658.t1 | AT5G26920 | 36.979 | 384 | 224 | 8 | 15 | 395 | 8 | 376 | 3.83e-74 | 244 |
| MS.gene88658.t1 | AT5G26920 | 35.198 | 429 | 241 | 12 | 35 | 453 | 28 | 429 | 1.66e-70 | 238 |
Find 188 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACTTGCGGCTTCAATTT+AGG | 0.227554 | 8.1:+4385495 | MS.gene88658:CDS |
| GACCAATCATCAAAAGGATT+TGG | 0.249013 | 8.1:-4387859 | None:intergenic |
| CTGTCTAACGACCATTTATT+AGG | 0.257471 | 8.1:+4387715 | MS.gene88658:CDS |
| CCAACATTTCTTGTATCTTC+TGG | 0.260798 | 8.1:-4386382 | None:intergenic |
| CGTAGATTCATTGGTGAAAA+AGG | 0.263119 | 8.1:+4386757 | MS.gene88658:CDS |
| TCATGCCAAGCCTGAATTTA+CGG | 0.267843 | 8.1:-4385847 | None:intergenic |
| ACCAATCATCAAAAGGATTT+GGG | 0.270429 | 8.1:-4387858 | None:intergenic |
| ATTCCAGGTCTTCCCCTAAA+AGG | 0.273733 | 8.1:+4385453 | MS.gene88658:intron |
| GGCTCCAATTCATGTTGTTC+TGG | 0.279294 | 8.1:+4385571 | MS.gene88658:CDS |
| ACCTACCGACGGAGCAAGTA+TGG | 0.282294 | 8.1:+4382835 | MS.gene88658:CDS |
| ATGAAGGTTGCATCTGGTTT+TGG | 0.301321 | 8.1:+4385866 | MS.gene88658:CDS |
| CTCGATGTCGTTGTCCTTGA+AGG | 0.310403 | 8.1:+4385647 | MS.gene88658:CDS |
| ATGATCATTTCTAGAGCTTT+GGG | 0.311058 | 8.1:-4387752 | None:intergenic |
| AGGAGGGAGTTGGAACATTA+GGG | 0.319027 | 8.1:+4385786 | MS.gene88658:CDS |
| TATGATCATTTCTAGAGCTT+TGG | 0.327299 | 8.1:-4387753 | None:intergenic |
| GATAGAGGAGTTAGATGAAT+AGG | 0.330153 | 8.1:+4388182 | MS.gene88658:CDS |
| GACCTTCCACTAAGTCTTGC+AGG | 0.335446 | 8.1:-4384470 | None:intergenic |
| AAGGAGGGAGTTGGAACATT+AGG | 0.344356 | 8.1:+4385785 | MS.gene88658:CDS |
| AGGAAAAGTGGAAGGCGAGC+AGG | 0.346252 | 8.1:+4385547 | MS.gene88658:CDS |
| CTTTCTTCGACTTGTGGTTA+AGG | 0.348617 | 8.1:+4386171 | MS.gene88658:CDS |
| AGAATTGCTCTCCTGTTATA+AGG | 0.349484 | 8.1:-4386438 | None:intergenic |
| CCTCCTCAATCATCAACTTC+AGG | 0.351569 | 8.1:+4387799 | MS.gene88658:CDS |
| CATTGTTAAAATCGCCTTCA+AGG | 0.369195 | 8.1:-4385661 | None:intergenic |
| CTTGGCATGAAGGTTGCATC+TGG | 0.376451 | 8.1:+4385860 | MS.gene88658:CDS |
| TTGATGATTGGTCAAACAAC+AGG | 0.382766 | 8.1:+4387869 | MS.gene88658:CDS |
| TATCCAAGCCAGGCCTTGAT+TGG | 0.383278 | 8.1:+4387652 | MS.gene88658:CDS |
| TCAACCAGAACAACATGAAT+TGG | 0.387226 | 8.1:-4385575 | None:intergenic |
| AAAAGGGCCCTTGAGGGTGG+TGG | 0.392097 | 8.1:+4382860 | MS.gene88658:CDS |
| GGTGAGCATTGCCTAATAAA+TGG | 0.392285 | 8.1:-4387726 | None:intergenic |
| CAGACAATTCAAGCTGGATA+AGG | 0.396389 | 8.1:+4385822 | MS.gene88658:CDS |
| GAGCTGCGTGGCCTTATAAC+AGG | 0.396907 | 8.1:+4386427 | MS.gene88658:CDS |
| GAAAGAGACCTTTGTTGAAC+GGG | 0.397608 | 8.1:+4385744 | MS.gene88658:CDS |
| ATAACCATCCTCAGTATTCA+TGG | 0.401476 | 8.1:-4388010 | None:intergenic |
| GTATGGAGATTGGAGAAAAT+AGG | 0.411051 | 8.1:+4386091 | MS.gene88658:CDS |
| CATGGCTTTCAAATTCCTCT+TGG | 0.412910 | 8.1:-4385703 | None:intergenic |
| ACAATGAAGATGATGAAGAT+TGG | 0.416706 | 8.1:+4385678 | MS.gene88658:CDS |
| TCAACAAAGGTCTCTTTCCT+TGG | 0.417676 | 8.1:-4385739 | None:intergenic |
| AGAGCAGGCCTCTTTCGTTC+AGG | 0.419912 | 8.1:-4382896 | None:intergenic |
| TCGTCCTGGCAAAGCTGTTG+TGG | 0.427546 | 8.1:+4388086 | MS.gene88658:CDS |
| TTAGGTCCTGCAAGACTTAG+TGG | 0.427991 | 8.1:+4384464 | MS.gene88658:CDS |
| CTTACAACTCTACGAAGAAT+AGG | 0.430379 | 8.1:-4383805 | None:intergenic |
| GAGCGTGCTTTGGCGAAGTT+AGG | 0.431759 | 8.1:+4384446 | MS.gene88658:CDS |
| ACGGAGCAAGTATGGGGAAA+AGG | 0.432238 | 8.1:+4382843 | MS.gene88658:CDS |
| GGAAAAGTGGAAGGCGAGCA+GGG | 0.434212 | 8.1:+4385548 | MS.gene88658:CDS |
| CTGCATTGGGTGACGATGTA+TGG | 0.434794 | 8.1:+4386074 | MS.gene88658:CDS |
| GGATAAGGAGCCGTAAATTC+AGG | 0.444391 | 8.1:+4385837 | MS.gene88658:CDS |
| GTCAAAATGACTCCGAGAGC+TGG | 0.445232 | 8.1:-4387680 | None:intergenic |
| AACAATCGCTTACCTCCAAC+TGG | 0.446420 | 8.1:-4386977 | None:intergenic |
| TTTCCAATCAAGGCCTGGCT+TGG | 0.454955 | 8.1:-4387655 | None:intergenic |
| CTTGGCGTTCTTTCACCACA+TGG | 0.459760 | 8.1:-4385721 | None:intergenic |
| TTGTTTGACCAATCATCAAA+AGG | 0.464007 | 8.1:-4387865 | None:intergenic |
| TGGAATTTCCAATCAAGGCC+TGG | 0.466762 | 8.1:-4387660 | None:intergenic |
| GGGAAAAGGGCCCTTGAGGG+TGG | 0.466874 | 8.1:+4382857 | MS.gene88658:CDS |
| GATGACCTCCCATGCTGAAA+AGG | 0.468471 | 8.1:-4387984 | None:intergenic |
| TTGGAGAAAATAGGTAAGGA+TGG | 0.469150 | 8.1:+4386100 | MS.gene88658:CDS |
| CGTCCTGGCAAAGCTGTTGT+GGG | 0.470319 | 8.1:+4388087 | MS.gene88658:CDS |
| AAGCATTATCCTCCTGCATT+GGG | 0.471644 | 8.1:+4386061 | MS.gene88658:CDS |
| CGGAGCAAGTATGGGGAAAA+GGG | 0.472146 | 8.1:+4382844 | MS.gene88658:CDS |
| GAAAAGTGGAAGGCGAGCAG+GGG | 0.473276 | 8.1:+4385549 | MS.gene88658:CDS |
| GCTTCAATTTAGGTCCCGCC+TGG | 0.478740 | 8.1:+4385505 | MS.gene88658:CDS |
| ATGGGGAAAAGGGCCCTTGA+GGG | 0.479275 | 8.1:+4382854 | MS.gene88658:CDS |
| TGAGAAGCGGGCTCAGATAG+AGG | 0.479668 | 8.1:+4388167 | MS.gene88658:CDS |
| AGCCGCAAGTTTCTACCATC+AGG | 0.481921 | 8.1:-4385485 | None:intergenic |
| TGAAGAAGTGGAGCGTGCTT+TGG | 0.482538 | 8.1:+4384436 | MS.gene88658:CDS |
| AACAGTAAAAGCCACTGTCT+TGG | 0.483889 | 8.1:-4385912 | None:intergenic |
| CCAGGTGTACGTAGATTCAT+TGG | 0.488667 | 8.1:+4386748 | MS.gene88658:intron |
| CATTTCTAGAGCTTTGGGAT+TGG | 0.490729 | 8.1:-4387747 | None:intergenic |
| TCTTCCCCTAAAAGGATTGA+AGG | 0.490929 | 8.1:+4385461 | MS.gene88658:CDS |
| GAAGCATTATCCTCCTGCAT+TGG | 0.492254 | 8.1:+4386060 | MS.gene88658:CDS |
| AGTGGAAGTGTGGTAACATC+TGG | 0.494354 | 8.1:+4385605 | MS.gene88658:CDS |
| ATAGGAGATGGCATGAATGA+TGG | 0.499594 | 8.1:-4388039 | None:intergenic |
| TGGTCGTTAGACAGATATAA+CGG | 0.502191 | 8.1:-4387706 | None:intergenic |
| AGCACAGTAGGGTTGGCTCT+TGG | 0.502333 | 8.1:+4387775 | MS.gene88658:CDS |
| AAAGATAGCAGCTGAGAAGC+GGG | 0.505005 | 8.1:+4388155 | MS.gene88658:CDS |
| ATTTGGGGCAGGTGGTTGCA+TGG | 0.506195 | 8.1:-4387842 | None:intergenic |
| GAGCGATCCTCATCGAAGTT+CGG | 0.507680 | 8.1:-4388063 | None:intergenic |
| TGAAGACTTTCTTCGACTTG+TGG | 0.512373 | 8.1:+4386165 | MS.gene88658:CDS |
| CAAAGACATGTGTTCTAAGC+GGG | 0.515939 | 8.1:+4386341 | MS.gene88658:CDS |
| GATGAGGATCGCTCTCGTCC+TGG | 0.516093 | 8.1:+4388072 | MS.gene88658:CDS |
| CATCCCACAACAGCTTTGCC+AGG | 0.518586 | 8.1:-4388090 | None:intergenic |
| TAAATTCAGGCTTGGCATGA+AGG | 0.518982 | 8.1:+4385850 | MS.gene88658:CDS |
| CCAGAAGATACAAGAAATGT+TGG | 0.524917 | 8.1:+4386382 | MS.gene88658:CDS |
| CCCATACTTGCTCCGTCGGT+AGG | 0.528831 | 8.1:-4382836 | None:intergenic |
| ATGATCAGCCTGAACGAAAG+AGG | 0.530138 | 8.1:+4382888 | MS.gene88658:CDS |
| TCTATTCACAGGAGGAAAAG+TGG | 0.530836 | 8.1:+4385535 | MS.gene88658:CDS |
| AGAAATGATCATAGCACAGT+AGG | 0.531016 | 8.1:+4387763 | MS.gene88658:CDS |
| CCTACCGACGGAGCAAGTAT+GGG | 0.532278 | 8.1:+4382836 | MS.gene88658:CDS |
| AGAGCTGGAATTTCCAATCA+AGG | 0.532492 | 8.1:-4387665 | None:intergenic |
| TAGGAGATGGCATGAATGAT+GGG | 0.538746 | 8.1:-4388038 | None:intergenic |
| CTGGCTCTTCCTCTATTCAC+AGG | 0.539816 | 8.1:+4385524 | MS.gene88658:CDS |
| TGTTACCACACTTCCACTGT+TGG | 0.541743 | 8.1:-4385600 | None:intergenic |
| TGATTGGAAATTCCAGCTCT+CGG | 0.541752 | 8.1:+4387668 | MS.gene88658:CDS |
| TGATCATAGCACAGTAGGGT+TGG | 0.542419 | 8.1:+4387768 | MS.gene88658:CDS |
| CTGTGAATAGAGGAAGAGCC+AGG | 0.543302 | 8.1:-4385523 | None:intergenic |
| GAGATTGGAGAAAATAGGTA+AGG | 0.543540 | 8.1:+4386096 | MS.gene88658:CDS |
| GGCATACGACAATTGGGAGC+AGG | 0.543575 | 8.1:+4386778 | MS.gene88658:CDS |
| GGTCGTTAGACAGATATAAC+GGG | 0.546075 | 8.1:-4387705 | None:intergenic |
| TTTACTGTTAAAGATCATAG+AGG | 0.549297 | 8.1:+4385926 | MS.gene88658:CDS |
| GTGACACTCAAGGAGGGAGT+TGG | 0.551007 | 8.1:+4385776 | MS.gene88658:CDS |
| GAAAGAGGCCTGCTCTTGCT+AGG | 0.551299 | 8.1:+4382903 | MS.gene88658:CDS |
| GCGGTATGTCAAACAAGATG+TGG | 0.556486 | 8.1:+4386299 | MS.gene88658:CDS |
| TCGAAGTTCGGCATAGGAGA+TGG | 0.557623 | 8.1:-4388051 | None:intergenic |
| ATTAATTCAGCGATGCCAGT+TGG | 0.558028 | 8.1:+4386962 | MS.gene88658:CDS |
| TCATCAAAAGGATTTGGGGC+AGG | 0.561538 | 8.1:-4387853 | None:intergenic |
| CTGGCAAAGCTGTTGTGGGA+TGG | 0.561875 | 8.1:+4388091 | MS.gene88658:CDS |
| AGGAGCCGTAAATTCAGGCT+TGG | 0.562655 | 8.1:+4385842 | MS.gene88658:CDS |
| TGCAATTCCCCGTTCAACAA+AGG | 0.563578 | 8.1:-4385752 | None:intergenic |
| GGAAAGAGACCTTTGTTGAA+CGG | 0.564757 | 8.1:+4385743 | MS.gene88658:CDS |
| AATTCAGCGATGCCAGTTGG+AGG | 0.566190 | 8.1:+4386965 | MS.gene88658:CDS |
| CATCATCTCCACCACCCTCA+AGG | 0.569454 | 8.1:-4382868 | None:intergenic |
| GGGTGACGATGTATGGAGAT+TGG | 0.571229 | 8.1:+4386081 | MS.gene88658:CDS |
| CATACATCGTCACCCAATGC+AGG | 0.571365 | 8.1:-4386073 | None:intergenic |
| TTCTCTTAGCGATAATCAGA+AGG | 0.571541 | 8.1:+4386471 | MS.gene88658:CDS |
| GAATAGAGGAAGAGCCAGGC+GGG | 0.573259 | 8.1:-4385519 | None:intergenic |
| GAAAGATAGCAGCTGAGAAG+CGG | 0.574867 | 8.1:+4388154 | MS.gene88658:CDS |
| GGTGACGAGGTATCCAAGCC+AGG | 0.574995 | 8.1:+4387642 | MS.gene88658:CDS |
| AATTAGTACCTAGCAAGAGC+AGG | 0.575775 | 8.1:-4382911 | None:intergenic |
| TGTAATTGTTGAAGCTCTCA+AGG | 0.576695 | 8.1:+4383747 | MS.gene88658:CDS |
| TTTCCCCATACTTGCTCCGT+CGG | 0.576968 | 8.1:-4382840 | None:intergenic |
| TGTTTGACATACCGCTCCCA+AGG | 0.580423 | 8.1:-4386291 | None:intergenic |
| GTAACAGACATGGGGAGGGA+TGG | 0.580675 | 8.1:-4386926 | None:intergenic |
| CCTTCCATGAATACTGAGGA+TGG | 0.581352 | 8.1:+4388006 | MS.gene88658:CDS |
| AGATCAAGGCAGCAATGAGG+TGG | 0.581898 | 8.1:+4388118 | MS.gene88658:CDS |
| TGGAGAAAATAGGTAAGGAT+GGG | 0.582851 | 8.1:+4386101 | MS.gene88658:CDS |
| AAAAGTGGAAGGCGAGCAGG+GGG | 0.583445 | 8.1:+4385550 | MS.gene88658:CDS |
| ATACTTGCTCCGTCGGTAGG+TGG | 0.585208 | 8.1:-4382833 | None:intergenic |
| TCAAAAGGATTTGGGGCAGG+TGG | 0.585247 | 8.1:-4387850 | None:intergenic |
| GATCAAGGCAGCAATGAGGT+GGG | 0.585308 | 8.1:+4388119 | MS.gene88658:CDS |
| CTGTTCAGAAGTAACAGACA+TGG | 0.586374 | 8.1:-4386936 | None:intergenic |
| TTAGAACACATGTCTTTGCA+TGG | 0.587365 | 8.1:-4386336 | None:intergenic |
| GAAACAGGTGAGTGAAGAAG+TGG | 0.587511 | 8.1:+4384424 | MS.gene88658:intron |
| CAGAAGTAACAGACATGGGG+AGG | 0.588161 | 8.1:-4386931 | None:intergenic |
| GAAATGATCATAGCACAGTA+GGG | 0.588957 | 8.1:+4387764 | MS.gene88658:CDS |
| GTGGAGTCAATTGATTATGA+TGG | 0.589511 | 8.1:+4386878 | MS.gene88658:CDS |
| AAAAGGATTGAAGGTCCTGA+TGG | 0.591187 | 8.1:+4385470 | MS.gene88658:CDS |
| TATTTACAGACAATTCAAGC+TGG | 0.591421 | 8.1:+4385816 | MS.gene88658:CDS |
| TCCTCATCGAAGTTCGGCAT+AGG | 0.592002 | 8.1:-4388057 | None:intergenic |
| ATCTGAAAATGAACTTCATG+TGG | 0.593527 | 8.1:+4386859 | MS.gene88658:CDS |
| TTGGTCAAACAACAGGGACA+AGG | 0.596217 | 8.1:+4387876 | MS.gene88658:CDS |
| TATGGGGAAAAGGGCCCTTG+AGG | 0.596359 | 8.1:+4382853 | MS.gene88658:CDS |
| TGTGGGATGGCTGAAGATCA+AGG | 0.598934 | 8.1:+4388104 | MS.gene88658:CDS |
| ATCATCTCCACCACCCTCAA+GGG | 0.602604 | 8.1:-4382867 | None:intergenic |
| GCAAAGACATGTGTTCTAAG+CGG | 0.603417 | 8.1:+4386340 | MS.gene88658:CDS |
| CCAATCATCAAAAGGATTTG+GGG | 0.604126 | 8.1:-4387857 | None:intergenic |
| GTACGATGGCAAATCACTTG+TGG | 0.605703 | 8.1:+4386808 | MS.gene88658:CDS |
| CCATCCTCAGTATTCATGGA+AGG | 0.606998 | 8.1:-4388006 | None:intergenic |
| CGGTATGTCAAACAAGATGT+GGG | 0.611205 | 8.1:+4386300 | MS.gene88658:CDS |
| TGTTCAGAAGTAACAGACAT+GGG | 0.619533 | 8.1:-4386935 | None:intergenic |
| ATCAAGGCAGCAATGAGGTG+GGG | 0.619987 | 8.1:+4388120 | MS.gene88658:CDS |
| TTAAGGATCAACAGAAATTG+CGG | 0.629713 | 8.1:+4386188 | MS.gene88658:CDS |
| TTCACAGGAGGAAAAGTGGA+AGG | 0.630540 | 8.1:+4385539 | MS.gene88658:CDS |
| AAACCTGAAGTTGATGATTG+AGG | 0.630756 | 8.1:-4387802 | None:intergenic |
| GAGTCAATTGATTATGATGG+CGG | 0.635927 | 8.1:+4386881 | MS.gene88658:CDS |
| TGATGATTGGTCAAACAACA+GGG | 0.639296 | 8.1:+4387870 | MS.gene88658:CDS |
| CTACCGACGGAGCAAGTATG+GGG | 0.641969 | 8.1:+4382837 | MS.gene88658:CDS |
| GGAGGGAGTTGGAACATTAG+GGG | 0.645782 | 8.1:+4385787 | MS.gene88658:CDS |
| GTCCTGCAAGACTTAGTGGA+AGG | 0.645964 | 8.1:+4384468 | MS.gene88658:CDS |
| TTGCAAGTGACACTCAAGGA+GGG | 0.648338 | 8.1:+4385770 | MS.gene88658:CDS |
| TTAATGTAGATCCTTGGGAG+CGG | 0.650892 | 8.1:+4386280 | MS.gene88658:intron |
| TGGTCAAACAACAGGGACAA+GGG | 0.651328 | 8.1:+4387877 | MS.gene88658:CDS |
| AAGTCGAAGAAAGTCTTCAA+CGG | 0.655298 | 8.1:-4386161 | None:intergenic |
| ACATCGTCACCCAATGCAGG+AGG | 0.659917 | 8.1:-4386070 | None:intergenic |
| GGAATTGCAAGTGACACTCA+AGG | 0.660054 | 8.1:+4385766 | MS.gene88658:CDS |
| TGATGAAGATTGGAGCCAAG+AGG | 0.663673 | 8.1:+4385688 | MS.gene88658:CDS |
| GTCCTGATGGTAGAAACTTG+CGG | 0.666102 | 8.1:+4385483 | MS.gene88658:CDS |
| CCTGAAGTTGATGATTGAGG+AGG | 0.672442 | 8.1:-4387799 | None:intergenic |
| TCCTATGCCGAACTTCGATG+AGG | 0.673170 | 8.1:+4388056 | MS.gene88658:CDS |
| AGAAGTAACAGACATGGGGA+GGG | 0.673646 | 8.1:-4386930 | None:intergenic |
| GTATCTCATTACTTCTAACG+CGG | 0.674561 | 8.1:-4387930 | None:intergenic |
| GCTCTTCCTCTATTCACAGG+AGG | 0.676444 | 8.1:+4385527 | MS.gene88658:CDS |
| GCATGGAAGAGCTAGCAGCA+TGG | 0.678116 | 8.1:-4387825 | None:intergenic |
| AAAGAGACCTTTGTTGAACG+GGG | 0.679526 | 8.1:+4385745 | MS.gene88658:CDS |
| GGCCACGCAGCTCATAGACG+TGG | 0.680553 | 8.1:-4386417 | None:intergenic |
| TGATGCCAACAGTGGAAGTG+TGG | 0.681364 | 8.1:+4385595 | MS.gene88658:CDS |
| TTAACAATAGCATGGTGACG+AGG | 0.687450 | 8.1:+4387629 | MS.gene88658:CDS |
| CATTCGTGAAGCCAAGACAG+TGG | 0.688012 | 8.1:+4385901 | MS.gene88658:CDS |
| ATGCAGAGACCACCTACCGA+CGG | 0.690427 | 8.1:+4382824 | MS.gene88658:CDS |
| GTTCTGGTTGATGCCAACAG+TGG | 0.693306 | 8.1:+4385587 | MS.gene88658:CDS |
| TCATCCTTCCATGAATACTG+AGG | 0.700726 | 8.1:+4388002 | MS.gene88658:CDS |
| TGAAGATCAAGGCAGCAATG+AGG | 0.700972 | 8.1:+4388115 | MS.gene88658:CDS |
| TGAATAGAGGAAGAGCCAGG+CGG | 0.704726 | 8.1:-4385520 | None:intergenic |
| AATTGTTGAAGCTCTCAAGG+TGG | 0.705133 | 8.1:+4383750 | MS.gene88658:CDS |
| GTTCAGAAGTAACAGACATG+GGG | 0.707126 | 8.1:-4386934 | None:intergenic |
| ATTGCAAGTGACACTCAAGG+AGG | 0.711537 | 8.1:+4385769 | MS.gene88658:CDS |
| GAGCAGGTTGTAGAGTACGA+TGG | 0.728618 | 8.1:+4386794 | MS.gene88658:CDS |
| AACCACGTCTATGAGCTGCG+TGG | 0.733614 | 8.1:+4386415 | MS.gene88658:CDS |
| CATGTGGTGAAAGAACGCCA+AGG | 0.747220 | 8.1:+4385722 | MS.gene88658:CDS |
| AGAGGAATTTGAAAGCCATG+TGG | 0.749246 | 8.1:+4385706 | MS.gene88658:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAAATGATACATT+AGG | - | chr8.1:4387290-4387309 | None:intergenic | 10.0% |
| !! | AATGAAAATTCAAATTAAAA+AGG | - | chr8.1:4383661-4383680 | None:intergenic | 10.0% |
| !! | TTCATATCAATTATATTAAT+TGG | - | chr8.1:4386560-4386579 | None:intergenic | 10.0% |
| !!! | TTACATTTTAAAAATTTCAT+TGG | - | chr8.1:4385193-4385212 | None:intergenic | 10.0% |
| !! | ATTAAATTTAACTATGATGA+TGG | - | chr8.1:4385384-4385403 | None:intergenic | 15.0% |
| !! | ATTGAAAATAAAATACTAAC+TGG | - | chr8.1:4383007-4383026 | None:intergenic | 15.0% |
| !!! | AACTACAAATATTTTGAAAT+TGG | - | chr8.1:4384525-4384544 | None:intergenic | 15.0% |
| !!! | ATTTGAATTTTCATTCTTAA+TGG | + | chr8.1:4383666-4383685 | MS.gene88658:intron | 15.0% |
| !!! | TTTTTGATTCAGTAATATTT+TGG | + | chr8.1:4383866-4383885 | MS.gene88658:intron | 15.0% |
| !! | ACAAATACAATAAAAATGCA+TGG | - | chr8.1:4384579-4384598 | None:intergenic | 20.0% |
| !! | ATAAAATATAAGAAAATGGG+TGG | - | chr8.1:4386259-4386278 | None:intergenic | 20.0% |
| !! | TCAAAAACACAAAGATATAA+GGG | - | chr8.1:4384670-4384689 | None:intergenic | 20.0% |
| !! | TCAACAAAAAAGATAAAGAA+GGG | - | chr8.1:4383367-4383386 | None:intergenic | 20.0% |
| !! | TTAAGAAATATGATAGAACA+GGG | + | chr8.1:4387039-4387058 | MS.gene88658:intron | 20.0% |
| !! | TTCAAAAACACAAAGATATA+AGG | - | chr8.1:4384671-4384690 | None:intergenic | 20.0% |
| !! | TTCAACAAAAAAGATAAAGA+AGG | - | chr8.1:4383368-4383387 | None:intergenic | 20.0% |
| !! | TTCTAATAAGTTAAAATTCC+AGG | + | chr8.1:4385438-4385457 | MS.gene88658:intron | 20.0% |
| !! | TTCTATTCCATTCAATTATT+TGG | - | chr8.1:4387008-4387027 | None:intergenic | 20.0% |
| !! | TTTAAGAAATATGATAGAAC+AGG | + | chr8.1:4387038-4387057 | MS.gene88658:intron | 20.0% |
| !!! | AAAAGTATTTGTATAACTAG+GGG | - | chr8.1:4387158-4387177 | None:intergenic | 20.0% |
| !!! | ACTTTTTAGTTGGAATAAAA+AGG | - | chr8.1:4383938-4383957 | None:intergenic | 20.0% |
| !!! | AGAAAAGTATTTGTATAACT+AGG | - | chr8.1:4387160-4387179 | None:intergenic | 20.0% |
| !!! | ATATTAAAAAATGGTGTTGT+AGG | - | chr8.1:4386010-4386029 | None:intergenic | 20.0% |
| !!! | ATGTGAATTTTTCTTCTTAA+TGG | + | chr8.1:4383392-4383411 | MS.gene88658:intron | 20.0% |
| !!! | ATTCAGTAATATTTTGGTTT+GGG | + | chr8.1:4383872-4383891 | MS.gene88658:intron | 20.0% |
| !!! | CTGATACCTTTAATTTTTTT+GGG | + | chr8.1:4386720-4386739 | MS.gene88658:intron | 20.0% |
| !!! | GAAAAGTATTTGTATAACTA+GGG | - | chr8.1:4387159-4387178 | None:intergenic | 20.0% |
| !!! | TATTTCTATTTAATGTCTCA+AGG | - | chr8.1:4385074-4385093 | None:intergenic | 20.0% |
| !!! | TATTTTTAACCAGCTAATTT+AGG | + | chr8.1:4385092-4385111 | MS.gene88658:intron | 20.0% |
| !!! | TCTGATACCTTTAATTTTTT+TGG | + | chr8.1:4386719-4386738 | MS.gene88658:intron | 20.0% |
| !!! | TTATTTTAATGTAGATCCTT+GGG | + | chr8.1:4386275-4386294 | MS.gene88658:intron | 20.0% |
| !!! | TTTACGTGTATAATTTTGAT+AGG | + | chr8.1:4385146-4385165 | MS.gene88658:intron | 20.0% |
| !!! | TTTATTTTAATGTAGATCCT+TGG | + | chr8.1:4386274-4386293 | MS.gene88658:intron | 20.0% |
| ! | AAAACAAATAGCAGAAATCA+GGG | - | chr8.1:4383844-4383863 | None:intergenic | 25.0% |
| ! | AAATACTAACTGGACTAAAA+AGG | - | chr8.1:4382997-4383016 | None:intergenic | 25.0% |
| ! | AAATGATACATTAGGATTCA+AGG | - | chr8.1:4387282-4387301 | None:intergenic | 25.0% |
| ! | AGAAGAAATAATTCCAATCT+TGG | + | chr8.1:4384263-4384282 | MS.gene88658:intron | 25.0% |
| ! | ATGTATATGCAAATTTCTCT+TGG | - | chr8.1:4387510-4387529 | None:intergenic | 25.0% |
| ! | CTTCTTATACACTGTATAAA+GGG | - | chr8.1:4386044-4386063 | None:intergenic | 25.0% |
| ! | GAAATTTATTACCTACAAGT+TGG | + | chr8.1:4384496-4384515 | MS.gene88658:intron | 25.0% |
| ! | GACTTTCCCAAAAAAATTAA+AGG | - | chr8.1:4386729-4386748 | None:intergenic | 25.0% |
| ! | GATTGTAATAGCTATTTGAA+TGG | + | chr8.1:4383490-4383509 | MS.gene88658:intron | 25.0% |
| ! | GGAATACAATGATAAAAAAG+GGG | - | chr8.1:4387137-4387156 | None:intergenic | 25.0% |
| ! | GGAGATAACACATAATTTAA+GGG | - | chr8.1:4384558-4384577 | None:intergenic | 25.0% |
| ! | GGGAATACAATGATAAAAAA+GGG | - | chr8.1:4387138-4387157 | None:intergenic | 25.0% |
| ! | GTAATACTCGTTATTAATGT+TGG | + | chr8.1:4383336-4383355 | MS.gene88658:intron | 25.0% |
| ! | TAAGAAATATGATAGAACAG+GGG | + | chr8.1:4387040-4387059 | MS.gene88658:intron | 25.0% |
| ! | TGGAGATAACACATAATTTA+AGG | - | chr8.1:4384559-4384578 | None:intergenic | 25.0% |
| ! | TTAGGAACCAAATAATTGAA+TGG | + | chr8.1:4386998-4387017 | MS.gene88658:intron | 25.0% |
| ! | TTATGCAACGATAATCAAAA+TGG | - | chr8.1:4383426-4383445 | None:intergenic | 25.0% |
| ! | TTGAATCGAAATCTAATAGA+GGG | - | chr8.1:4384705-4384724 | None:intergenic | 25.0% |
| ! | TTGATGCTCAAATAAATGAA+TGG | + | chr8.1:4384393-4384412 | MS.gene88658:intron | 25.0% |
| ! | TTGGAAATAAAAGAACCAAA+TGG | - | chr8.1:4384183-4384202 | None:intergenic | 25.0% |
| ! | TTTACTGTTAAAGATCATAG+AGG | + | chr8.1:4385926-4385945 | MS.gene88658:CDS | 25.0% |
| ! | TTTAGTAAAAGAAAGTAGCA+GGG | - | chr8.1:4384949-4384968 | None:intergenic | 25.0% |
| !! | CATTCATTTGATAATTTGTG+TGG | + | chr8.1:4384217-4384236 | MS.gene88658:intron | 25.0% |
| !! | TAATTTAGGTTCTTGCATAT+AGG | + | chr8.1:4385106-4385125 | MS.gene88658:intron | 25.0% |
| !! | TTTTAGTAAAAGAAAGTAGC+AGG | - | chr8.1:4384950-4384969 | None:intergenic | 25.0% |
| !!! | AAGAAAGTATTAAGTTAGAG+AGG | + | chr8.1:4384761-4384780 | MS.gene88658:intron | 25.0% |
| !!! | GATTCAGTAATATTTTGGTT+TGG | + | chr8.1:4383871-4383890 | MS.gene88658:intron | 25.0% |
| !!! | TTCAGTAATATTTTGGTTTG+GGG | + | chr8.1:4383873-4383892 | MS.gene88658:intron | 25.0% |
| AAACTACAAACTCTGAACAT+TGG | - | chr8.1:4386665-4386684 | None:intergenic | 30.0% | |
| AAATTGCGGAATGTAAGTTT+AGG | + | chr8.1:4386202-4386221 | MS.gene88658:intron | 30.0% | |
| AACCAACAATGAAACTACAA+AGG | + | chr8.1:4384807-4384826 | MS.gene88658:intron | 30.0% | |
| AAGTATTAAGTTAGAGAGGT+AGG | + | chr8.1:4384765-4384784 | MS.gene88658:intron | 30.0% | |
| AATATAAGAAAATGGGTGGA+AGG | - | chr8.1:4386255-4386274 | None:intergenic | 30.0% | |
| AATGTCCAACTTAACAATCT+CGG | - | chr8.1:4383101-4383120 | None:intergenic | 30.0% | |
| AATTGACAACTGACAACAAA+AGG | - | chr8.1:4383305-4383324 | None:intergenic | 30.0% | |
| ACAATGAAGATGATGAAGAT+TGG | + | chr8.1:4385678-4385697 | MS.gene88658:CDS | 30.0% | |
| ACCAATCATCAAAAGGATTT+GGG | - | chr8.1:4387861-4387880 | None:intergenic | 30.0% | |
| ACCTACATTCAAGATAAAGA+TGG | - | chr8.1:4386232-4386251 | None:intergenic | 30.0% | |
| ACCTGAAAGGAAAATGTATA+TGG | - | chr8.1:4387608-4387627 | None:intergenic | 30.0% | |
| ACTAATCAGTTGGATTATCA+TGG | + | chr8.1:4383274-4383293 | MS.gene88658:intron | 30.0% | |
| ACTGTGTTAAGTGTTAACTA+TGG | + | chr8.1:4384640-4384659 | MS.gene88658:intron | 30.0% | |
| ACTTTCAATGGAAAAAATGC+AGG | - | chr8.1:4386508-4386527 | None:intergenic | 30.0% | |
| ATATCAGAAAGAATCTTCCT+AGG | - | chr8.1:4383453-4383472 | None:intergenic | 30.0% | |
| ATCTGAAAATGAACTTCATG+TGG | + | chr8.1:4386859-4386878 | MS.gene88658:CDS | 30.0% | |
| CACAAAAAGTTGAATAATGC+TGG | + | chr8.1:4386130-4386149 | MS.gene88658:CDS | 30.0% | |
| CTCTATTAGATTTCGATTCA+AGG | + | chr8.1:4384704-4384723 | MS.gene88658:intron | 30.0% | |
| CTTGAATCGAAATCTAATAG+AGG | - | chr8.1:4384706-4384725 | None:intergenic | 30.0% | |
| GAAAACAAATAGCAGAAATC+AGG | - | chr8.1:4383845-4383864 | None:intergenic | 30.0% | |
| GCTTCTTATACACTGTATAA+AGG | - | chr8.1:4386045-4386064 | None:intergenic | 30.0% | |
| GGGGAATACAATGATAAAAA+AGG | - | chr8.1:4387139-4387158 | None:intergenic | 30.0% | |
| TAAAGTGTACAGTAAGTCAT+TGG | + | chr8.1:4385271-4385290 | MS.gene88658:intron | 30.0% | |
| TAAGAAGAAACTACGTGTTA+AGG | + | chr8.1:4385304-4385323 | MS.gene88658:intron | 30.0% | |
| TATTTACAGACAATTCAAGC+TGG | + | chr8.1:4385816-4385835 | MS.gene88658:CDS | 30.0% | |
| TCCATCTTTATCTTGAATGT+AGG | + | chr8.1:4386228-4386247 | MS.gene88658:intron | 30.0% | |
| TGAATGGTACTAATTGAAAC+AGG | + | chr8.1:4384409-4384428 | MS.gene88658:intron | 30.0% | |
| TGATAATCCAACTGATTAGT+CGG | - | chr8.1:4383274-4383293 | None:intergenic | 30.0% | |
| TGCTATTGTTAAAACCTGAA+AGG | - | chr8.1:4387621-4387640 | None:intergenic | 30.0% | |
| TGTTAAGTGTTAACTATGGT+CGG | + | chr8.1:4384644-4384663 | MS.gene88658:intron | 30.0% | |
| TTAAGGATCAACAGAAATTG+CGG | + | chr8.1:4386188-4386207 | MS.gene88658:CDS | 30.0% | |
| TTAATGTCTCAAGGAAATCA+GGG | - | chr8.1:4385065-4385084 | None:intergenic | 30.0% | |
| TTCTATTTCAAAGGATGATG+TGG | + | chr8.1:4384833-4384852 | MS.gene88658:intron | 30.0% | |
| TTGTTTGACCAATCATCAAA+AGG | - | chr8.1:4387868-4387887 | None:intergenic | 30.0% | |
| TTTAATGTCTCAAGGAAATC+AGG | - | chr8.1:4385066-4385085 | None:intergenic | 30.0% | |
| TTTGTAGTTTCATTGTTGGT+TGG | - | chr8.1:4384808-4384827 | None:intergenic | 30.0% | |
| ! | AATCAGAAAAGTGCATACTA+TGG | + | chr8.1:4386635-4386654 | MS.gene88658:intron | 30.0% |
| ! | AGAAAACAAATTTGAGACAC+AGG | - | chr8.1:4387384-4387403 | None:intergenic | 30.0% |
| ! | TCCATATACATTTTCCTTTC+AGG | + | chr8.1:4387604-4387623 | MS.gene88658:intron | 30.0% |
| !! | AATTTTGATAGGATGGACAT+TGG | + | chr8.1:4385157-4385176 | MS.gene88658:intron | 30.0% |
| !! | ATGATCATTTCTAGAGCTTT+GGG | - | chr8.1:4387755-4387774 | None:intergenic | 30.0% |
| !! | CAAAGGCATTTCTATTTCAA+AGG | + | chr8.1:4384824-4384843 | MS.gene88658:intron | 30.0% |
| !! | CGGAAAAATGACTTTTTAGT+TGG | - | chr8.1:4383948-4383967 | None:intergenic | 30.0% |
| !! | CGTGTATAATTTTGATAGGA+TGG | + | chr8.1:4385150-4385169 | MS.gene88658:intron | 30.0% |
| !! | GGTTCTTTTATTTCCAATCT+TGG | + | chr8.1:4384186-4384205 | MS.gene88658:intron | 30.0% |
| !! | TATGATCATTTCTAGAGCTT+TGG | - | chr8.1:4387756-4387775 | None:intergenic | 30.0% |
| !! | TCGAGTTTTATACATGATTC+AGG | - | chr8.1:4385632-4385651 | None:intergenic | 30.0% |
| !! | TTCAGGTTTTAACAATAGCA+TGG | + | chr8.1:4387621-4387640 | MS.gene88658:intron | 30.0% |
| !!! | ACTCGAGTTTCTTTTTTCTA+AGG | + | chr8.1:4383580-4383599 | MS.gene88658:intron | 30.0% |
| !!! | GGCTAGCTTTAGTTTTTTTT+GGG | + | chr8.1:4383545-4383564 | MS.gene88658:intron | 30.0% |
| !!! | TAATTTTTTTGGGAAAGTCC+AGG | + | chr8.1:4386730-4386749 | MS.gene88658:intron | 30.0% |
| !!! | TCAGTAATATTTTGGTTTGG+GGG | + | chr8.1:4383874-4383893 | MS.gene88658:intron | 30.0% |
| !!! | TGGCTAGCTTTAGTTTTTTT+TGG | + | chr8.1:4383544-4383563 | MS.gene88658:intron | 30.0% |
| AACACATGCTCAACTTTCAA+TGG | - | chr8.1:4386520-4386539 | None:intergenic | 35.0% | |
| AAGTCGAAGAAAGTCTTCAA+CGG | - | chr8.1:4386164-4386183 | None:intergenic | 35.0% | |
| ACACCACATTCTTTCTTTGT+CGG | + | chr8.1:4384908-4384927 | MS.gene88658:intron | 35.0% | |
| ACATCATACACAATCAGCAA+AGG | - | chr8.1:4387566-4387585 | None:intergenic | 35.0% | |
| AGAAATGATCATAGCACAGT+AGG | + | chr8.1:4387763-4387782 | MS.gene88658:CDS | 35.0% | |
| AGAATTGCTCTCCTGTTATA+AGG | - | chr8.1:4386441-4386460 | None:intergenic | 35.0% | |
| ATAACCATCCTCAGTATTCA+TGG | - | chr8.1:4388013-4388032 | None:intergenic | 35.0% | |
| ATATGACATGGCGTTTAAGA+AGG | - | chr8.1:4383980-4383999 | None:intergenic | 35.0% | |
| ATGCAAGAACCTAAATTAGC+TGG | - | chr8.1:4385104-4385123 | None:intergenic | 35.0% | |
| ATTTAATTCATTGGCGAGTC+TGG | + | chr8.1:4385408-4385427 | MS.gene88658:intron | 35.0% | |
| ATTTGTCCATAGACTAAGCA+AGG | + | chr8.1:4384593-4384612 | MS.gene88658:intron | 35.0% | |
| CAACTATGGAATTCTGCATT+TGG | + | chr8.1:4383524-4383543 | MS.gene88658:intron | 35.0% | |
| CAATACCGAGATTGTTAAGT+TGG | + | chr8.1:4383093-4383112 | MS.gene88658:intron | 35.0% | |
| CATTGTTAAAATCGCCTTCA+AGG | - | chr8.1:4385664-4385683 | None:intergenic | 35.0% | |
| CCAACATTTCTTGTATCTTC+TGG | - | chr8.1:4386385-4386404 | None:intergenic | 35.0% | |
| CCAATCATCAAAAGGATTTG+GGG | - | chr8.1:4387860-4387879 | None:intergenic | 35.0% | |
| CCAGAAGATACAAGAAATGT+TGG | + | chr8.1:4386382-4386401 | MS.gene88658:CDS | 35.0% | |
| CGTAGATTCATTGGTGAAAA+AGG | + | chr8.1:4386757-4386776 | MS.gene88658:CDS | 35.0% | |
| CTGTCTAACGACCATTTATT+AGG | + | chr8.1:4387715-4387734 | MS.gene88658:CDS | 35.0% | |
| CTTACAACTCTACGAAGAAT+AGG | - | chr8.1:4383808-4383827 | None:intergenic | 35.0% | |
| CTTACTGTACACTTTAAGCT+AGG | - | chr8.1:4385267-4385286 | None:intergenic | 35.0% | |
| GAAATGATCATAGCACAGTA+GGG | + | chr8.1:4387764-4387783 | MS.gene88658:CDS | 35.0% | |
| GAAGCTCTCTATTAGGAATA+GGG | + | chr8.1:4386690-4386709 | MS.gene88658:intron | 35.0% | |
| GACCAATCATCAAAAGGATT+TGG | - | chr8.1:4387862-4387881 | None:intergenic | 35.0% | |
| GAGATTGGAGAAAATAGGTA+AGG | + | chr8.1:4386096-4386115 | MS.gene88658:CDS | 35.0% | |
| GAGTCAATTGATTATGATGG+CGG | + | chr8.1:4386881-4386900 | MS.gene88658:CDS | 35.0% | |
| GTATCTCATTACTTCTAACG+CGG | - | chr8.1:4387933-4387952 | None:intergenic | 35.0% | |
| GTATGGAGATTGGAGAAAAT+AGG | + | chr8.1:4386091-4386110 | MS.gene88658:CDS | 35.0% | |
| GTGGAGTCAATTGATTATGA+TGG | + | chr8.1:4386878-4386897 | MS.gene88658:CDS | 35.0% | |
| GTTTAAGAAGGGACATTATG+CGG | - | chr8.1:4383968-4383987 | None:intergenic | 35.0% | |
| TATACTGTCATGCTGTGAAT+AGG | - | chr8.1:4384133-4384152 | None:intergenic | 35.0% | |
| TATGACATGGCGTTTAAGAA+GGG | - | chr8.1:4383979-4383998 | None:intergenic | 35.0% | |
| TATGCAAATTTCTCTTGGAC+AGG | - | chr8.1:4387505-4387524 | None:intergenic | 35.0% | |
| TCAACCAGAACAACATGAAT+TGG | - | chr8.1:4385578-4385597 | None:intergenic | 35.0% | |
| TGAAAACTCACACACACAAA+GGG | - | chr8.1:4383158-4383177 | None:intergenic | 35.0% | |
| TGAAGCTCTCTATTAGGAAT+AGG | + | chr8.1:4386689-4386708 | MS.gene88658:intron | 35.0% | |
| TGCCTTTGTAGTTTCATTGT+TGG | - | chr8.1:4384812-4384831 | None:intergenic | 35.0% | |
| TGGAGAAAATAGGTAAGGAT+GGG | + | chr8.1:4386101-4386120 | MS.gene88658:CDS | 35.0% | |
| TGGTCGTTAGACAGATATAA+CGG | - | chr8.1:4387709-4387728 | None:intergenic | 35.0% | |
| TGTAATTGTTGAAGCTCTCA+AGG | + | chr8.1:4383747-4383766 | MS.gene88658:CDS | 35.0% | |
| TGTTCAGAAGTAACAGACAT+GGG | - | chr8.1:4386938-4386957 | None:intergenic | 35.0% | |
| TTAAACGCCATGTCATATAG+TGG | + | chr8.1:4383982-4384001 | MS.gene88658:intron | 35.0% | |
| TTAATGACCGACTAATCAGT+TGG | + | chr8.1:4383264-4383283 | MS.gene88658:intron | 35.0% | |
| TTAGAACACATGTCTTTGCA+TGG | - | chr8.1:4386339-4386358 | None:intergenic | 35.0% | |
| TTCCTAATAGAGAGCTTCAA+AGG | - | chr8.1:4386688-4386707 | None:intergenic | 35.0% | |
| TTCTCTTAGCGATAATCAGA+AGG | + | chr8.1:4386471-4386490 | MS.gene88658:CDS | 35.0% | |
| TTGAAAACTCACACACACAA+AGG | - | chr8.1:4383159-4383178 | None:intergenic | 35.0% | |
| TTGGAGAAAATAGGTAAGGA+TGG | + | chr8.1:4386100-4386119 | MS.gene88658:CDS | 35.0% | |
| ! | AGAGTATTCTCTACTGTGAA+GGG | - | chr8.1:4387089-4387108 | None:intergenic | 35.0% |
| ! | ATCCTTTAAGCTAGCTTGAA+AGG | + | chr8.1:4384736-4384755 | MS.gene88658:intron | 35.0% |
| ! | GAAAAAGGCATACGACAATT+GGG | + | chr8.1:4386772-4386791 | MS.gene88658:CDS | 35.0% |
| ! | GAAATTGGTTTCCAACTTGT+AGG | - | chr8.1:4384510-4384529 | None:intergenic | 35.0% |
| ! | GATGATGGCATTAATTGAAG+TGG | - | chr8.1:4385369-4385388 | None:intergenic | 35.0% |
| ! | TAGAGTATTCTCTACTGTGA+AGG | - | chr8.1:4387090-4387109 | None:intergenic | 35.0% |
| ! | TGAAAAAGGCATACGACAAT+TGG | + | chr8.1:4386771-4386790 | MS.gene88658:CDS | 35.0% |
| ! | TGATGATTGGTCAAACAACA+GGG | + | chr8.1:4387870-4387889 | MS.gene88658:CDS | 35.0% |
| ! | TTGATGATTGGTCAAACAAC+AGG | + | chr8.1:4387869-4387888 | MS.gene88658:CDS | 35.0% |
| ! | TTTGATTTCAGTGCTCCATT+TGG | + | chr8.1:4384165-4384184 | MS.gene88658:intron | 35.0% |
| !! | AAACCTGAAGTTGATGATTG+AGG | - | chr8.1:4387805-4387824 | None:intergenic | 35.0% |
| !! | AGAAGGTAAAGCATTGAAGT+TGG | - | chr8.1:4385982-4386001 | None:intergenic | 35.0% |
| !! | GTTAAGTTGGACATTTGTTG+TGG | + | chr8.1:4383106-4383125 | MS.gene88658:intron | 35.0% |
| !! | TTCCTTTGAAGCTCTCTATT+AGG | + | chr8.1:4386683-4386702 | MS.gene88658:intron | 35.0% |
| !!! | TAATATTTTGGTTTGGGGGT+GGG | + | chr8.1:4383878-4383897 | MS.gene88658:intron | 35.0% |
| !!! | TGTTGATGACTTCTTTTCAG+AGG | + | chr8.1:4387900-4387919 | MS.gene88658:CDS | 35.0% |
| AAAAGGATTGAAGGTCCTGA+TGG | + | chr8.1:4385470-4385489 | MS.gene88658:CDS | 40.0% | |
| AAAGAGACCTTTGTTGAACG+GGG | + | chr8.1:4385745-4385764 | MS.gene88658:CDS | 40.0% | |
| AACAGTAAAAGCCACTGTCT+TGG | - | chr8.1:4385915-4385934 | None:intergenic | 40.0% | |
| AAGCATTATCCTCCTGCATT+GGG | + | chr8.1:4386061-4386080 | MS.gene88658:CDS | 40.0% | |
| AAGGAAACAGAAACGCTGTT+AGG | - | chr8.1:4387263-4387282 | None:intergenic | 40.0% | |
| AATTAGTACCTAGCAAGAGC+AGG | - | chr8.1:4382914-4382933 | None:intergenic | 40.0% | |
| AATTGTTGAAGCTCTCAAGG+TGG | + | chr8.1:4383750-4383769 | MS.gene88658:CDS | 40.0% | |
| AGAGCTGGAATTTCCAATCA+AGG | - | chr8.1:4387668-4387687 | None:intergenic | 40.0% | |
| AGAGGAATTTGAAAGCCATG+TGG | + | chr8.1:4385706-4385725 | MS.gene88658:CDS | 40.0% | |
| AGGAAACAGAAACGCTGTTA+GGG | - | chr8.1:4387262-4387281 | None:intergenic | 40.0% | |
| ATAGGAGATGGCATGAATGA+TGG | - | chr8.1:4388042-4388061 | None:intergenic | 40.0% | |
| ATGCCGACAAAGAAAGAATG+TGG | - | chr8.1:4384914-4384933 | None:intergenic | 40.0% | |
| ATTAATTCAGCGATGCCAGT+TGG | + | chr8.1:4386962-4386981 | MS.gene88658:CDS | 40.0% | |
| CAGACAATTCAAGCTGGATA+AGG | + | chr8.1:4385822-4385841 | MS.gene88658:CDS | 40.0% | |
| CATGGCTTTCAAATTCCTCT+TGG | - | chr8.1:4385706-4385725 | None:intergenic | 40.0% | |
| CCAACACGACAAAACATCTT+TGG | - | chr8.1:4383223-4383242 | None:intergenic | 40.0% | |
| CCATGTCATATAGTGGTCTT+CGG | + | chr8.1:4383989-4384008 | MS.gene88658:intron | 40.0% | |
| CGCTCAAAAGAAAAGGAGAA+GGG | - | chr8.1:4387343-4387362 | None:intergenic | 40.0% | |
| CGGTATGTCAAACAAGATGT+GGG | + | chr8.1:4386300-4386319 | MS.gene88658:CDS | 40.0% | |
| CTGTTCAGAAGTAACAGACA+TGG | - | chr8.1:4386939-4386958 | None:intergenic | 40.0% | |
| GAAACTTGCGGCTTCAATTT+AGG | + | chr8.1:4385495-4385514 | MS.gene88658:CDS | 40.0% | |
| GAAAGAGACCTTTGTTGAAC+GGG | + | chr8.1:4385744-4385763 | MS.gene88658:CDS | 40.0% | |
| GAATGATGTCACACCAAGAT+TGG | - | chr8.1:4384202-4384221 | None:intergenic | 40.0% | |
| GAGTATTCTCTACTGTGAAG+GGG | - | chr8.1:4387088-4387107 | None:intergenic | 40.0% | |
| GCTATTTGAATGGCATAGCA+TGG | + | chr8.1:4383500-4383519 | MS.gene88658:intron | 40.0% | |
| GGAAAGAGACCTTTGTTGAA+CGG | + | chr8.1:4385743-4385762 | MS.gene88658:CDS | 40.0% | |
| GGAAGTAAACAGTTCCAACT+GGG | - | chr8.1:4383202-4383221 | None:intergenic | 40.0% | |
| GGTCGTTAGACAGATATAAC+GGG | - | chr8.1:4387708-4387727 | None:intergenic | 40.0% | |
| GTGACATCGCTCAAAAGAAA+AGG | - | chr8.1:4387350-4387369 | None:intergenic | 40.0% | |
| GTTCAGAAGTAACAGACATG+GGG | - | chr8.1:4386937-4386956 | None:intergenic | 40.0% | |
| TAAATTCAGGCTTGGCATGA+AGG | + | chr8.1:4385850-4385869 | MS.gene88658:CDS | 40.0% | |
| TAGGAGATGGCATGAATGAT+GGG | - | chr8.1:4388041-4388060 | None:intergenic | 40.0% | |
| TATCGTTGCATAATGCACCT+AGG | + | chr8.1:4383433-4383452 | MS.gene88658:intron | 40.0% | |
| TCAAAAGAAAAGGAGAAGGG+AGG | - | chr8.1:4387340-4387359 | None:intergenic | 40.0% | |
| TCAACAAAGGTCTCTTTCCT+TGG | - | chr8.1:4385742-4385761 | None:intergenic | 40.0% | |
| TCATCCTTCCATGAATACTG+AGG | + | chr8.1:4388002-4388021 | MS.gene88658:CDS | 40.0% | |
| TCATGCCAAGCCTGAATTTA+CGG | - | chr8.1:4385850-4385869 | None:intergenic | 40.0% | |
| TCGCTCAAAAGAAAAGGAGA+AGG | - | chr8.1:4387344-4387363 | None:intergenic | 40.0% | |
| TCTATTCACAGGAGGAAAAG+TGG | + | chr8.1:4385535-4385554 | MS.gene88658:CDS | 40.0% | |
| TCTTCCCCTAAAAGGATTGA+AGG | + | chr8.1:4385461-4385480 | MS.gene88658:CDS | 40.0% | |
| TGAGCATGTGTTTATGTTGC+TGG | + | chr8.1:4386528-4386547 | MS.gene88658:intron | 40.0% | |
| TGATTGGAAATTCCAGCTCT+CGG | + | chr8.1:4387668-4387687 | MS.gene88658:CDS | 40.0% | |
| TGGAAGTAAACAGTTCCAAC+TGG | - | chr8.1:4383203-4383222 | None:intergenic | 40.0% | |
| TTAATGTAGATCCTTGGGAG+CGG | + | chr8.1:4386280-4386299 | MS.gene88658:intron | 40.0% | |
| TTGCAACCTTGCTTAGTCTA+TGG | - | chr8.1:4384602-4384621 | None:intergenic | 40.0% | |
| ! | ACTTTTCCTCCTGTGAATAG+AGG | - | chr8.1:4385536-4385555 | None:intergenic | 40.0% |
| ! | AGGACCTTCAATCCTTTTAG+GGG | - | chr8.1:4385468-4385487 | None:intergenic | 40.0% |
| ! | CAAAGACATGTGTTCTAAGC+GGG | + | chr8.1:4386341-4386360 | MS.gene88658:CDS | 40.0% |
| ! | CAGGACCTTCAATCCTTTTA+GGG | - | chr8.1:4385469-4385488 | None:intergenic | 40.0% |
| ! | CCAAAGATGTTTTGTCGTGT+TGG | + | chr8.1:4383220-4383239 | MS.gene88658:intron | 40.0% |
| ! | CTCCTTTCAAGCTAGCTTAA+AGG | - | chr8.1:4384741-4384760 | None:intergenic | 40.0% |
| ! | CTTTCTTCGACTTGTGGTTA+AGG | + | chr8.1:4386171-4386190 | MS.gene88658:CDS | 40.0% |
| ! | GCAAAGACATGTGTTCTAAG+CGG | + | chr8.1:4386340-4386359 | MS.gene88658:CDS | 40.0% |
| ! | GGTGAGCATTGCCTAATAAA+TGG | - | chr8.1:4387729-4387748 | None:intergenic | 40.0% |
| ! | TCAGGACCTTCAATCCTTTT+AGG | - | chr8.1:4385470-4385489 | None:intergenic | 40.0% |
| ! | TGAAGACTTTCTTCGACTTG+TGG | + | chr8.1:4386165-4386184 | MS.gene88658:CDS | 40.0% |
| ! | TTAACAATAGCATGGTGACG+AGG | + | chr8.1:4387629-4387648 | MS.gene88658:CDS | 40.0% |
| !! | ATGAAGGTTGCATCTGGTTT+TGG | + | chr8.1:4385866-4385885 | MS.gene88658:CDS | 40.0% |
| !! | CATTTCTAGAGCTTTGGGAT+TGG | - | chr8.1:4387750-4387769 | None:intergenic | 40.0% |
| !! | CCCCAAATCCTTTTGATGAT+TGG | + | chr8.1:4387857-4387876 | MS.gene88658:CDS | 40.0% |
| !!! | AATATTTTGGTTTGGGGGTG+GGG | + | chr8.1:4383879-4383898 | MS.gene88658:intron | 40.0% |
| !!! | GTAATATTTTGGTTTGGGGG+TGG | + | chr8.1:4383877-4383896 | MS.gene88658:intron | 40.0% |
| AAACTCACACACACAAAGGG+AGG | - | chr8.1:4383155-4383174 | None:intergenic | 45.0% | |
| AAAGATAGCAGCTGAGAAGC+GGG | + | chr8.1:4388155-4388174 | MS.gene88658:CDS | 45.0% | |
| AACAATCGCTTACCTCCAAC+TGG | - | chr8.1:4386980-4386999 | None:intergenic | 45.0% | |
| AAGAAAGTAGCAGGGTCTTG+TGG | - | chr8.1:4384941-4384960 | None:intergenic | 45.0% | |
| AAGGAGGGAGTTGGAACATT+AGG | + | chr8.1:4385785-4385804 | MS.gene88658:CDS | 45.0% | |
| ACACTTTAAGCTAGGCAGGT+AGG | - | chr8.1:4385259-4385278 | None:intergenic | 45.0% | |
| AGAAGTAACAGACATGGGGA+GGG | - | chr8.1:4386933-4386952 | None:intergenic | 45.0% | |
| AGGAGGGAGTTGGAACATTA+GGG | + | chr8.1:4385786-4385805 | MS.gene88658:CDS | 45.0% | |
| AGGATCTTAGATTCGATCCC+GGG | - | chr8.1:4383135-4383154 | None:intergenic | 45.0% | |
| ATGATCAGCCTGAACGAAAG+AGG | + | chr8.1:4382888-4382907 | MS.gene88658:CDS | 45.0% | |
| ATGTCTCAAGGAAATCAGGG+AGG | - | chr8.1:4385062-4385081 | None:intergenic | 45.0% | |
| ATTCCAGGTCTTCCCCTAAA+AGG | + | chr8.1:4385453-4385472 | MS.gene88658:intron | 45.0% | |
| ATTGCAAGTGACACTCAAGG+AGG | + | chr8.1:4385769-4385788 | MS.gene88658:CDS | 45.0% | |
| CCAATGAATCTACGTACACC+TGG | - | chr8.1:4386751-4386770 | None:intergenic | 45.0% | |
| CCAGGTGTACGTAGATTCAT+TGG | + | chr8.1:4386748-4386767 | MS.gene88658:intron | 45.0% | |
| CCATCCTCAGTATTCATGGA+AGG | - | chr8.1:4388009-4388028 | None:intergenic | 45.0% | |
| CCGAAGACCACTATATGACA+TGG | - | chr8.1:4383992-4384011 | None:intergenic | 45.0% | |
| CCTCCTCAATCATCAACTTC+AGG | + | chr8.1:4387799-4387818 | MS.gene88658:CDS | 45.0% | |
| CCTTCCATGAATACTGAGGA+TGG | + | chr8.1:4388006-4388025 | MS.gene88658:CDS | 45.0% | |
| CTACTCTACTGTATCCCAGT+TGG | + | chr8.1:4383185-4383204 | MS.gene88658:intron | 45.0% | |
| CTGTACACTTTAAGCTAGGC+AGG | - | chr8.1:4385263-4385282 | None:intergenic | 45.0% | |
| GAAACAGGTGAGTGAAGAAG+TGG | + | chr8.1:4384424-4384443 | MS.gene88658:intron | 45.0% | |
| GAAAGATAGCAGCTGAGAAG+CGG | + | chr8.1:4388154-4388173 | MS.gene88658:CDS | 45.0% | |
| GAGGATCTTAGATTCGATCC+CGG | - | chr8.1:4383136-4383155 | None:intergenic | 45.0% | |
| GCGGTATGTCAAACAAGATG+TGG | + | chr8.1:4386299-4386318 | MS.gene88658:CDS | 45.0% | |
| GGAATTGCAAGTGACACTCA+AGG | + | chr8.1:4385766-4385785 | MS.gene88658:CDS | 45.0% | |
| GGATAAGGAGCCGTAAATTC+AGG | + | chr8.1:4385837-4385856 | MS.gene88658:CDS | 45.0% | |
| GGCTCCAATTCATGTTGTTC+TGG | + | chr8.1:4385571-4385590 | MS.gene88658:CDS | 45.0% | |
| GGTAGGTATCCTGTAGAAAG+AGG | + | chr8.1:4384782-4384801 | MS.gene88658:intron | 45.0% | |
| GTAGGCTCAAATCGGAGAAT+GGG | - | chr8.1:4385241-4385260 | None:intergenic | 45.0% | |
| GTCCTGATGGTAGAAACTTG+CGG | + | chr8.1:4385483-4385502 | MS.gene88658:CDS | 45.0% | |
| GTTGGAGGTAAGCGATTGTT+AGG | + | chr8.1:4386980-4386999 | MS.gene88658:intron | 45.0% | |
| TAGGCTCAAATCGGAGAATG+GGG | - | chr8.1:4385240-4385259 | None:intergenic | 45.0% | |
| TGAAGATCAAGGCAGCAATG+AGG | + | chr8.1:4388115-4388134 | MS.gene88658:CDS | 45.0% | |
| TGATCATAGCACAGTAGGGT+TGG | + | chr8.1:4387768-4387787 | MS.gene88658:CDS | 45.0% | |
| TGATGAAGATTGGAGCCAAG+AGG | + | chr8.1:4385688-4385707 | MS.gene88658:CDS | 45.0% | |
| TGCAATTCCCCGTTCAACAA+AGG | - | chr8.1:4385755-4385774 | None:intergenic | 45.0% | |
| TGGAATTTCCAATCAAGGCC+TGG | - | chr8.1:4387663-4387682 | None:intergenic | 45.0% | |
| TGGCATAGCATGGTCAACTA+TGG | + | chr8.1:4383510-4383529 | MS.gene88658:intron | 45.0% | |
| TGGTCAAACAACAGGGACAA+GGG | + | chr8.1:4387877-4387896 | MS.gene88658:CDS | 45.0% | |
| TGTTACCACACTTCCACTGT+TGG | - | chr8.1:4385603-4385622 | None:intergenic | 45.0% | |
| TTAGGTCCTGCAAGACTTAG+TGG | + | chr8.1:4384464-4384483 | MS.gene88658:CDS | 45.0% | |
| TTCACAGGAGGAAAAGTGGA+AGG | + | chr8.1:4385539-4385558 | MS.gene88658:CDS | 45.0% | |
| TTGCAAGTGACACTCAAGGA+GGG | + | chr8.1:4385770-4385789 | MS.gene88658:CDS | 45.0% | |
| TTGGTCAAACAACAGGGACA+AGG | + | chr8.1:4387876-4387895 | MS.gene88658:CDS | 45.0% | |
| ! | AGTGGAAGTGTGGTAACATC+TGG | + | chr8.1:4385605-4385624 | MS.gene88658:CDS | 45.0% |
| ! | GAAGCATTATCCTCCTGCAT+TGG | + | chr8.1:4386060-4386079 | MS.gene88658:CDS | 45.0% |
| ! | TCATCAAAAGGATTTGGGGC+AGG | - | chr8.1:4387856-4387875 | None:intergenic | 45.0% |
| ! | TTGCTTCGCCTTTTCAGCAT+GGG | + | chr8.1:4387976-4387995 | MS.gene88658:CDS | 45.0% |
| !! | AATCCTTTTAGGGGAAGACC+TGG | - | chr8.1:4385459-4385478 | None:intergenic | 45.0% |
| !! | CCTGAAGTTGATGATTGAGG+AGG | - | chr8.1:4387802-4387821 | None:intergenic | 45.0% |
| !! | GACATTTGTTGTGGTTACCC+GGG | + | chr8.1:4383115-4383134 | MS.gene88658:intron | 45.0% |
| !! | GGACATTTGTTGTGGTTACC+CGG | + | chr8.1:4383114-4383133 | MS.gene88658:intron | 45.0% |
| !! | TGGTGTTGTAGGTTGCAAGA+AGG | - | chr8.1:4385999-4386018 | None:intergenic | 45.0% |
| !!! | ATATTTTGGTTTGGGGGTGG+GGG | + | chr8.1:4383880-4383899 | MS.gene88658:intron | 45.0% |
| !! | AAAAATAAGATATTAAAAAA+TGG | - | chr8.1:4386019-4386038 | None:intergenic | 5.0% |
| !! | AAAATAAAATATAAGAAAAT+GGG | - | chr8.1:4386262-4386281 | None:intergenic | 5.0% |
| !! | TAAAATAAAATATAAGAAAA+TGG | - | chr8.1:4386263-4386282 | None:intergenic | 5.0% |
| !! | TTAATTTAAATTTAATTCAT+TGG | + | chr8.1:4385399-4385418 | MS.gene88658:intron | 5.0% |
| !!! | TTTAAAATATTTTTAGTATT+TGG | - | chr8.1:4387474-4387493 | None:intergenic | 5.0% |
| AATTCAGCGATGCCAGTTGG+AGG | + | chr8.1:4386965-4386984 | MS.gene88658:CDS | 50.0% | |
| ACGGAGCAAGTATGGGGAAA+AGG | + | chr8.1:4382843-4382862 | MS.gene88658:CDS | 50.0% | |
| AGAAAAGGAGAAGGGAGGTG+AGG | - | chr8.1:4387335-4387354 | None:intergenic | 50.0% | |
| AGATCAAGGCAGCAATGAGG+TGG | + | chr8.1:4388118-4388137 | MS.gene88658:CDS | 50.0% | |
| AGCCGCAAGTTTCTACCATC+AGG | - | chr8.1:4385488-4385507 | None:intergenic | 50.0% | |
| AGGAGCCGTAAATTCAGGCT+TGG | + | chr8.1:4385842-4385861 | MS.gene88658:CDS | 50.0% | |
| ATCAAGGCAGCAATGAGGTG+GGG | + | chr8.1:4388120-4388139 | MS.gene88658:CDS | 50.0% | |
| ATCATCTCCACCACCCTCAA+GGG | - | chr8.1:4382870-4382889 | None:intergenic | 50.0% | |
| CAGAAGTAACAGACATGGGG+AGG | - | chr8.1:4386934-4386953 | None:intergenic | 50.0% | |
| CATACATCGTCACCCAATGC+AGG | - | chr8.1:4386076-4386095 | None:intergenic | 50.0% | |
| CATGTGGTGAAAGAACGCCA+AGG | + | chr8.1:4385722-4385741 | MS.gene88658:CDS | 50.0% | |
| CATTCGTGAAGCCAAGACAG+TGG | + | chr8.1:4385901-4385920 | MS.gene88658:CDS | 50.0% | |
| CGGAGCAAGTATGGGGAAAA+GGG | + | chr8.1:4382844-4382863 | MS.gene88658:CDS | 50.0% | |
| CTAGGCAGGTAGGCTCAAAT+CGG | - | chr8.1:4385249-4385268 | None:intergenic | 50.0% | |
| CTCGATGTCGTTGTCCTTGA+AGG | + | chr8.1:4385647-4385666 | MS.gene88658:CDS | 50.0% | |
| CTGCATTGGGTGACGATGTA+TGG | + | chr8.1:4386074-4386093 | MS.gene88658:CDS | 50.0% | |
| CTGTGAATAGAGGAAGAGCC+AGG | - | chr8.1:4385526-4385545 | None:intergenic | 50.0% | |
| CTTGGCATGAAGGTTGCATC+TGG | + | chr8.1:4385860-4385879 | MS.gene88658:CDS | 50.0% | |
| CTTGGCGTTCTTTCACCACA+TGG | - | chr8.1:4385724-4385743 | None:intergenic | 50.0% | |
| GACCTTCCACTAAGTCTTGC+AGG | - | chr8.1:4384473-4384492 | None:intergenic | 50.0% | |
| GAGCAGGTTGTAGAGTACGA+TGG | + | chr8.1:4386794-4386813 | MS.gene88658:CDS | 50.0% | |
| GAGCGATCCTCATCGAAGTT+CGG | - | chr8.1:4388066-4388085 | None:intergenic | 50.0% | |
| GATCAAGGCAGCAATGAGGT+GGG | + | chr8.1:4388119-4388138 | MS.gene88658:CDS | 50.0% | |
| GATGACCTCCCATGCTGAAA+AGG | - | chr8.1:4387987-4388006 | None:intergenic | 50.0% | |
| GCTCTTCCTCTATTCACAGG+AGG | + | chr8.1:4385527-4385546 | MS.gene88658:CDS | 50.0% | |
| GGAAATCAGGGAGGCAGTAT+TGG | - | chr8.1:4385053-4385072 | None:intergenic | 50.0% | |
| GGAGGGAGTTGGAACATTAG+GGG | + | chr8.1:4385787-4385806 | MS.gene88658:CDS | 50.0% | |
| GGGTGACGATGTATGGAGAT+TGG | + | chr8.1:4386081-4386100 | MS.gene88658:CDS | 50.0% | |
| GGTAGGCTCAAATCGGAGAA+TGG | - | chr8.1:4385242-4385261 | None:intergenic | 50.0% | |
| GTCAAAATGACTCCGAGAGC+TGG | - | chr8.1:4387683-4387702 | None:intergenic | 50.0% | |
| GTCCTGCAAGACTTAGTGGA+AGG | + | chr8.1:4384468-4384487 | MS.gene88658:CDS | 50.0% | |
| TACTGTGAAGGGGAAACCCT+TGG | - | chr8.1:4387078-4387097 | None:intergenic | 50.0% | |
| TATCCAAGCCAGGCCTTGAT+TGG | + | chr8.1:4387652-4387671 | MS.gene88658:CDS | 50.0% | |
| TCCTATGCCGAACTTCGATG+AGG | + | chr8.1:4388056-4388075 | MS.gene88658:CDS | 50.0% | |
| TCCTCATCGAAGTTCGGCAT+AGG | - | chr8.1:4388060-4388079 | None:intergenic | 50.0% | |
| TCGAAGTTCGGCATAGGAGA+TGG | - | chr8.1:4388054-4388073 | None:intergenic | 50.0% | |
| TCGGTATTGTCAGCTGAGCT+AGG | - | chr8.1:4383082-4383101 | None:intergenic | 50.0% | |
| TCTGTGCTCATGCAAGTGTG+AGG | - | chr8.1:4386605-4386624 | None:intergenic | 50.0% | |
| TGAAGAAGTGGAGCGTGCTT+TGG | + | chr8.1:4384436-4384455 | MS.gene88658:CDS | 50.0% | |
| TGAATAGAGGAAGAGCCAGG+CGG | - | chr8.1:4385523-4385542 | None:intergenic | 50.0% | |
| TGATGCCAACAGTGGAAGTG+TGG | + | chr8.1:4385595-4385614 | MS.gene88658:CDS | 50.0% | |
| TGTGGGATGGCTGAAGATCA+AGG | + | chr8.1:4388104-4388123 | MS.gene88658:CDS | 50.0% | |
| TGTTTGACATACCGCTCCCA+AGG | - | chr8.1:4386294-4386313 | None:intergenic | 50.0% | |
| TTTCCAATCAAGGCCTGGCT+TGG | - | chr8.1:4387658-4387677 | None:intergenic | 50.0% | |
| TTTCCCCATACTTGCTCCGT+CGG | - | chr8.1:4382843-4382862 | None:intergenic | 50.0% | |
| ! | CTGGCTCTTCCTCTATTCAC+AGG | + | chr8.1:4385524-4385543 | MS.gene88658:CDS | 50.0% |
| ! | CTTGCTTCGCCTTTTCAGCA+TGG | + | chr8.1:4387975-4387994 | MS.gene88658:CDS | 50.0% |
| ! | GTTCTGGTTGATGCCAACAG+TGG | + | chr8.1:4385587-4385606 | MS.gene88658:CDS | 50.0% |
| ! | TCAAAAGGATTTGGGGCAGG+TGG | - | chr8.1:4387853-4387872 | None:intergenic | 50.0% |
| !! | GTTGGTTGGCCTCTTTCTAC+AGG | - | chr8.1:4384794-4384813 | None:intergenic | 50.0% |
| AAAAGTGGAAGGCGAGCAGG+GGG | + | chr8.1:4385550-4385569 | MS.gene88658:CDS | 55.0% | |
| AACCACGTCTATGAGCTGCG+TGG | + | chr8.1:4386415-4386434 | MS.gene88658:CDS | 55.0% | |
| ACATCGTCACCCAATGCAGG+AGG | - | chr8.1:4386073-4386092 | None:intergenic | 55.0% | |
| ACCTACCGACGGAGCAAGTA+TGG | + | chr8.1:4382835-4382854 | MS.gene88658:CDS | 55.0% | |
| AGAGCAGGCCTCTTTCGTTC+AGG | - | chr8.1:4382899-4382918 | None:intergenic | 55.0% | |
| AGGAAAAGTGGAAGGCGAGC+AGG | + | chr8.1:4385547-4385566 | MS.gene88658:CDS | 55.0% | |
| AGGGGAGAATCACTCCTCCA+AGG | + | chr8.1:4387058-4387077 | MS.gene88658:intron | 55.0% | |
| ATACTTGCTCCGTCGGTAGG+TGG | - | chr8.1:4382836-4382855 | None:intergenic | 55.0% | |
| ATGCAGAGACCACCTACCGA+CGG | + | chr8.1:4382824-4382843 | MS.gene88658:CDS | 55.0% | |
| ATGGGGAAAAGGGCCCTTGA+GGG | + | chr8.1:4382854-4382873 | MS.gene88658:CDS | 55.0% | |
| CATCATCTCCACCACCCTCA+AGG | - | chr8.1:4382871-4382890 | None:intergenic | 55.0% | |
| CATCCCACAACAGCTTTGCC+AGG | - | chr8.1:4388093-4388112 | None:intergenic | 55.0% | |
| CCTACCGACGGAGCAAGTAT+GGG | + | chr8.1:4382836-4382855 | MS.gene88658:CDS | 55.0% | |
| CGTCCTGGCAAAGCTGTTGT+GGG | + | chr8.1:4388087-4388106 | MS.gene88658:CDS | 55.0% | |
| CTACCGACGGAGCAAGTATG+GGG | + | chr8.1:4382837-4382856 | MS.gene88658:CDS | 55.0% | |
| CTGGCAAAGCTGTTGTGGGA+TGG | + | chr8.1:4388091-4388110 | MS.gene88658:CDS | 55.0% | |
| GAAAAGTGGAAGGCGAGCAG+GGG | + | chr8.1:4385549-4385568 | MS.gene88658:CDS | 55.0% | |
| GAAAGAGGCCTGCTCTTGCT+AGG | + | chr8.1:4382903-4382922 | MS.gene88658:CDS | 55.0% | |
| GAATAGAGGAAGAGCCAGGC+GGG | - | chr8.1:4385522-4385541 | None:intergenic | 55.0% | |
| GAGCGTGCTTTGGCGAAGTT+AGG | + | chr8.1:4384446-4384465 | MS.gene88658:CDS | 55.0% | |
| GCATGGAAGAGCTAGCAGCA+TGG | - | chr8.1:4387828-4387847 | None:intergenic | 55.0% | |
| GCTTCAATTTAGGTCCCGCC+TGG | + | chr8.1:4385505-4385524 | MS.gene88658:CDS | 55.0% | |
| GGAAAAGTGGAAGGCGAGCA+GGG | + | chr8.1:4385548-4385567 | MS.gene88658:CDS | 55.0% | |
| GGCATACGACAATTGGGAGC+AGG | + | chr8.1:4386778-4386797 | MS.gene88658:CDS | 55.0% | |
| GGGGAGAATCACTCCTCCAA+GGG | + | chr8.1:4387059-4387078 | MS.gene88658:intron | 55.0% | |
| GTAACAGACATGGGGAGGGA+TGG | - | chr8.1:4386929-4386948 | None:intergenic | 55.0% | |
| GTGACACTCAAGGAGGGAGT+TGG | + | chr8.1:4385776-4385795 | MS.gene88658:CDS | 55.0% | |
| TATGGGGAAAAGGGCCCTTG+AGG | + | chr8.1:4382853-4382872 | MS.gene88658:CDS | 55.0% | |
| TCGTCCTGGCAAAGCTGTTG+TGG | + | chr8.1:4388086-4388105 | MS.gene88658:CDS | 55.0% | |
| TGTGAAGGGGAAACCCTTGG+AGG | - | chr8.1:4387075-4387094 | None:intergenic | 55.0% | |
| ! | ATTTGGGGCAGGTGGTTGCA+TGG | - | chr8.1:4387845-4387864 | None:intergenic | 55.0% |
| ! | CTTCGCCTTTTCAGCATGGG+AGG | + | chr8.1:4387979-4387998 | MS.gene88658:CDS | 55.0% |
| ! | TGAGAAGCGGGCTCAGATAG+AGG | + | chr8.1:4388167-4388186 | MS.gene88658:CDS | 55.0% |
| !! | AGCACAGTAGGGTTGGCTCT+TGG | + | chr8.1:4387775-4387794 | MS.gene88658:CDS | 55.0% |
| !! | GAGCTGCGTGGCCTTATAAC+AGG | + | chr8.1:4386427-4386446 | MS.gene88658:CDS | 55.0% |
| AAAAGGGCCCTTGAGGGTGG+TGG | + | chr8.1:4382860-4382879 | MS.gene88658:CDS | 60.0% | |
| CCCATACTTGCTCCGTCGGT+AGG | - | chr8.1:4382839-4382858 | None:intergenic | 60.0% | |
| GATGAGGATCGCTCTCGTCC+TGG | + | chr8.1:4388072-4388091 | MS.gene88658:CDS | 60.0% | |
| ! | GGTGACGAGGTATCCAAGCC+AGG | + | chr8.1:4387642-4387661 | MS.gene88658:CDS | 60.0% |
| GGCCACGCAGCTCATAGACG+TGG | - | chr8.1:4386420-4386439 | None:intergenic | 65.0% | |
| GGGAAAAGGGCCCTTGAGGG+TGG | + | chr8.1:4382857-4382876 | MS.gene88658:CDS | 65.0% | |
| !! | TTGGTTTGGGGGTGGGGGAC+TGG | + | chr8.1:4383885-4383904 | MS.gene88658:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4382824 | 4388203 | 4382824 | ID=MS.gene88658 |
| chr8.1 | mRNA | 4382824 | 4388203 | 4382824 | ID=MS.gene88658.t1;Parent=MS.gene88658 |
| chr8.1 | exon | 4382824 | 4382924 | 4382824 | ID=MS.gene88658.t1.exon1;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4382824 | 4382924 | 4382824 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| chr8.1 | exon | 4383747 | 4383822 | 4383747 | ID=MS.gene88658.t1.exon2;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4383747 | 4383822 | 4383747 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| chr8.1 | exon | 4384431 | 4384489 | 4384431 | ID=MS.gene88658.t1.exon3;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4384431 | 4384489 | 4384431 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| chr8.1 | exon | 4385460 | 4385953 | 4385460 | ID=MS.gene88658.t1.exon4;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4385460 | 4385953 | 4385460 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| chr8.1 | exon | 4386053 | 4386213 | 4386053 | ID=MS.gene88658.t1.exon5;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4386053 | 4386213 | 4386053 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| chr8.1 | exon | 4386289 | 4386492 | 4386289 | ID=MS.gene88658.t1.exon6;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4386289 | 4386492 | 4386289 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| chr8.1 | exon | 4386752 | 4386986 | 4386752 | ID=MS.gene88658.t1.exon7;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4386752 | 4386986 | 4386752 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| chr8.1 | exon | 4387626 | 4388203 | 4387626 | ID=MS.gene88658.t1.exon8;Parent=MS.gene88658.t1 |
| chr8.1 | CDS | 4387626 | 4388203 | 4387626 | ID=cds.MS.gene88658.t1;Parent=MS.gene88658.t1 |
| Gene Sequence |
| Protein sequence |
