Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90395.t1 | XP_003595892.1 | 90.3 | 472 | 27 | 2 | 1 | 453 | 1 | 472 | 9.30E-252 | 879 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90395.t1 | P55748 | 61.3 | 432 | 140 | 5 | 42 | 449 | 4 | 432 | 2.0e-157 | 557.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90395.t1 | G7IT50 | 90.3 | 472 | 27 | 2 | 1 | 453 | 1 | 472 | 6.7e-252 | 879.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90395.t1 | MTR_2g063000 | 91.314 | 472 | 22 | 2 | 1 | 453 | 1 | 472 | 0.0 | 883 |
MS.gene90395.t1 | MTR_2g063000 | 84.746 | 472 | 22 | 3 | 1 | 453 | 1 | 441 | 0.0 | 801 |
MS.gene90395.t1 | MTR_2g062990 | 80.252 | 476 | 66 | 6 | 1 | 453 | 1 | 471 | 0.0 | 773 |
MS.gene90395.t1 | MTR_2g081620 | 77.495 | 471 | 83 | 4 | 1 | 450 | 1 | 469 | 0.0 | 746 |
MS.gene90395.t1 | MTR_2g062980 | 77.358 | 477 | 78 | 7 | 1 | 452 | 1 | 472 | 0.0 | 739 |
MS.gene90395.t1 | MTR_1g095560 | 52.967 | 455 | 197 | 7 | 1 | 451 | 1 | 442 | 1.85e-169 | 484 |
MS.gene90395.t1 | MTR_1g095560 | 54.717 | 424 | 178 | 6 | 1 | 420 | 1 | 414 | 3.58e-167 | 479 |
MS.gene90395.t1 | MTR_1g095540 | 51.209 | 455 | 205 | 7 | 1 | 451 | 1 | 442 | 1.43e-160 | 461 |
MS.gene90395.t1 | MTR_7g013790 | 43.579 | 475 | 230 | 10 | 1 | 446 | 1 | 466 | 8.88e-141 | 412 |
MS.gene90395.t1 | MTR_3g079590 | 48.317 | 416 | 200 | 8 | 36 | 451 | 76 | 476 | 1.54e-135 | 399 |
MS.gene90395.t1 | MTR_3g079570 | 47.115 | 416 | 204 | 9 | 36 | 451 | 77 | 476 | 9.55e-134 | 394 |
MS.gene90395.t1 | MTR_3g079560 | 45.000 | 440 | 224 | 11 | 13 | 451 | 54 | 476 | 6.01e-131 | 387 |
MS.gene90395.t1 | MTR_3g079600 | 45.823 | 419 | 209 | 9 | 36 | 451 | 74 | 477 | 1.01e-127 | 379 |
MS.gene90395.t1 | MTR_3g034290 | 43.448 | 435 | 229 | 9 | 24 | 453 | 56 | 478 | 8.45e-125 | 372 |
MS.gene90395.t1 | MTR_1g021010 | 46.860 | 414 | 200 | 10 | 40 | 451 | 77 | 472 | 2.87e-124 | 370 |
MS.gene90395.t1 | MTR_3g079630 | 45.433 | 427 | 204 | 11 | 36 | 451 | 76 | 484 | 6.84e-124 | 370 |
MS.gene90395.t1 | MTR_1g020090 | 44.548 | 431 | 217 | 12 | 22 | 451 | 74 | 483 | 2.87e-123 | 368 |
MS.gene90395.t1 | MTR_3g079620 | 43.807 | 436 | 220 | 10 | 25 | 451 | 65 | 484 | 6.52e-123 | 367 |
MS.gene90395.t1 | MTR_2g012860 | 41.758 | 455 | 243 | 9 | 8 | 448 | 10 | 456 | 1.03e-122 | 366 |
MS.gene90395.t1 | MTR_1g021020 | 44.548 | 431 | 220 | 9 | 22 | 451 | 61 | 473 | 3.30e-122 | 365 |
MS.gene90395.t1 | MTR_4g075150 | 45.116 | 430 | 215 | 12 | 32 | 451 | 29 | 447 | 2.84e-121 | 362 |
MS.gene90395.t1 | MTR_4g122950 | 42.404 | 441 | 213 | 8 | 42 | 445 | 42 | 478 | 1.61e-120 | 360 |
MS.gene90395.t1 | MTR_4g075150 | 44.676 | 432 | 216 | 12 | 32 | 451 | 29 | 449 | 3.78e-120 | 359 |
MS.gene90395.t1 | MTR_0003s0560 | 43.780 | 418 | 219 | 10 | 35 | 451 | 71 | 473 | 9.93e-118 | 353 |
MS.gene90395.t1 | MTR_4g089155 | 42.381 | 420 | 221 | 9 | 42 | 448 | 57 | 468 | 2.71e-116 | 350 |
MS.gene90395.t1 | MTR_4g122960 | 41.913 | 439 | 216 | 8 | 42 | 445 | 42 | 476 | 3.72e-115 | 347 |
MS.gene90395.t1 | MTR_2g012850 | 41.509 | 424 | 229 | 9 | 36 | 448 | 33 | 448 | 1.16e-114 | 345 |
MS.gene90395.t1 | MTR_3g034290 | 45.455 | 363 | 183 | 8 | 24 | 381 | 56 | 408 | 2.18e-110 | 332 |
MS.gene90395.t1 | MTR_3g090130 | 37.560 | 418 | 246 | 8 | 42 | 451 | 32 | 442 | 1.73e-95 | 295 |
MS.gene90395.t1 | MTR_5g072570 | 36.739 | 460 | 260 | 10 | 6 | 451 | 5 | 447 | 3.04e-95 | 295 |
MS.gene90395.t1 | MTR_2g449850 | 38.876 | 445 | 219 | 16 | 36 | 445 | 37 | 463 | 2.04e-90 | 282 |
MS.gene90395.t1 | MTR_3g434850 | 37.447 | 470 | 237 | 18 | 12 | 446 | 9 | 456 | 2.73e-90 | 282 |
MS.gene90395.t1 | MTR_3g090150 | 36.493 | 422 | 247 | 10 | 42 | 451 | 37 | 449 | 6.30e-90 | 281 |
MS.gene90395.t1 | MTR_8g099930 | 36.180 | 445 | 229 | 13 | 1 | 418 | 1 | 417 | 1.26e-86 | 273 |
MS.gene90395.t1 | MTR_1g040370 | 36.111 | 432 | 208 | 12 | 36 | 444 | 29 | 415 | 8.41e-85 | 266 |
MS.gene90395.t1 | MTR_3g498755 | 36.036 | 444 | 242 | 13 | 36 | 446 | 13 | 447 | 5.46e-84 | 265 |
MS.gene90395.t1 | MTR_0003s0560 | 46.350 | 274 | 139 | 7 | 35 | 307 | 71 | 337 | 3.49e-83 | 260 |
MS.gene90395.t1 | MTR_7g021130 | 34.573 | 457 | 250 | 14 | 20 | 444 | 18 | 457 | 9.77e-81 | 257 |
MS.gene90395.t1 | MTR_8g011350 | 32.265 | 499 | 273 | 13 | 1 | 451 | 1 | 482 | 1.19e-73 | 240 |
MS.gene90395.t1 | MTR_8g011350 | 32.618 | 466 | 251 | 12 | 1 | 418 | 1 | 451 | 8.88e-72 | 234 |
MS.gene90395.t1 | MTR_7g051430 | 31.373 | 459 | 257 | 11 | 42 | 451 | 33 | 482 | 4.82e-66 | 220 |
MS.gene90395.t1 | MTR_7g080180 | 31.062 | 499 | 269 | 18 | 11 | 451 | 4 | 485 | 1.99e-64 | 216 |
MS.gene90395.t1 | MTR_7g080180 | 32.018 | 456 | 242 | 16 | 23 | 420 | 11 | 456 | 1.11e-63 | 213 |
MS.gene90395.t1 | MTR_7g051430 | 41.111 | 270 | 149 | 6 | 42 | 306 | 33 | 297 | 2.15e-57 | 195 |
MS.gene90395.t1 | MTR_1g102130 | 32.394 | 426 | 233 | 14 | 36 | 448 | 90 | 473 | 1.20e-54 | 190 |
MS.gene90395.t1 | MTR_4g021510 | 28.571 | 427 | 270 | 13 | 42 | 448 | 42 | 453 | 1.37e-46 | 167 |
MS.gene90395.t1 | MTR_4g021535 | 30.216 | 417 | 249 | 15 | 42 | 433 | 39 | 438 | 1.40e-45 | 165 |
MS.gene90395.t1 | MTR_2g018590 | 28.178 | 472 | 290 | 16 | 3 | 448 | 5 | 453 | 5.31e-45 | 163 |
MS.gene90395.t1 | MTR_4g021530 | 28.285 | 449 | 289 | 15 | 4 | 433 | 8 | 442 | 1.24e-44 | 162 |
MS.gene90395.t1 | MTR_4g021520 | 28.140 | 430 | 268 | 12 | 42 | 448 | 43 | 454 | 1.61e-44 | 162 |
MS.gene90395.t1 | MTR_4g021520 | 28.750 | 400 | 246 | 11 | 42 | 418 | 43 | 426 | 6.45e-44 | 159 |
MS.gene90395.t1 | MTR_2g018600 | 28.241 | 432 | 278 | 13 | 38 | 448 | 33 | 453 | 2.30e-43 | 159 |
MS.gene90395.t1 | MTR_3g100420 | 27.079 | 469 | 292 | 15 | 8 | 444 | 26 | 476 | 1.08e-42 | 157 |
MS.gene90395.t1 | MTR_4g021500 | 28.873 | 426 | 270 | 14 | 42 | 448 | 43 | 454 | 1.26e-42 | 161 |
MS.gene90395.t1 | MTR_4g021500 | 27.033 | 418 | 274 | 11 | 49 | 448 | 485 | 889 | 5.06e-40 | 154 |
MS.gene90395.t1 | MTR_2g018630 | 29.126 | 412 | 266 | 12 | 38 | 433 | 36 | 437 | 1.32e-42 | 157 |
MS.gene90395.t1 | MTR_4g021500 | 28.873 | 426 | 270 | 14 | 42 | 448 | 43 | 454 | 1.57e-42 | 161 |
MS.gene90395.t1 | MTR_4g021500 | 28.362 | 409 | 262 | 14 | 49 | 448 | 485 | 871 | 4.62e-40 | 154 |
MS.gene90395.t1 | MTR_4g021490 | 27.294 | 425 | 278 | 14 | 42 | 448 | 43 | 454 | 6.16e-40 | 149 |
MS.gene90395.t1 | MTR_4g057570 | 27.253 | 455 | 281 | 13 | 18 | 451 | 54 | 479 | 2.89e-38 | 145 |
MS.gene90395.t1 | MTR_3g045770 | 26.698 | 427 | 283 | 11 | 38 | 448 | 26 | 438 | 4.35e-38 | 144 |
MS.gene90395.t1 | MTR_2g095730 | 25.495 | 455 | 281 | 15 | 19 | 451 | 66 | 484 | 4.73e-38 | 145 |
MS.gene90395.t1 | MTR_4g057585 | 28.947 | 418 | 247 | 13 | 53 | 451 | 96 | 482 | 7.87e-38 | 144 |
MS.gene90395.t1 | MTR_4g057595 | 28.708 | 418 | 248 | 13 | 53 | 451 | 97 | 483 | 1.73e-37 | 143 |
MS.gene90395.t1 | MTR_1g050545 | 40.196 | 204 | 116 | 5 | 51 | 254 | 81 | 278 | 1.32e-36 | 140 |
MS.gene90395.t1 | MTR_2g095750 | 28.169 | 426 | 241 | 16 | 53 | 451 | 100 | 487 | 2.50e-36 | 140 |
MS.gene90395.t1 | MTR_0075s0010 | 26.579 | 380 | 193 | 13 | 35 | 401 | 5 | 311 | 2.84e-33 | 128 |
MS.gene90395.t1 | MTR_2g009200 | 26.190 | 420 | 245 | 12 | 25 | 419 | 14 | 393 | 2.43e-32 | 128 |
MS.gene90395.t1 | MTR_1g094155 | 39.773 | 176 | 99 | 5 | 53 | 228 | 90 | 258 | 5.29e-32 | 128 |
MS.gene90395.t1 | MTR_4g057600 | 30.314 | 287 | 167 | 8 | 53 | 313 | 95 | 374 | 5.11e-31 | 125 |
MS.gene90395.t1 | MTR_4g021535 | 26.619 | 417 | 217 | 16 | 42 | 433 | 39 | 391 | 9.00e-30 | 120 |
MS.gene90395.t1 | MTR_5g097180 | 25.060 | 419 | 259 | 16 | 55 | 453 | 43 | 426 | 1.80e-28 | 117 |
MS.gene90395.t1 | MTR_2g018630 | 27.193 | 342 | 216 | 11 | 110 | 433 | 6 | 332 | 5.66e-26 | 108 |
MS.gene90395.t1 | MTR_4g084710 | 25.060 | 419 | 259 | 15 | 55 | 453 | 45 | 428 | 1.71e-25 | 108 |
MS.gene90395.t1 | MTR_2g095710 | 25.455 | 385 | 245 | 13 | 24 | 402 | 71 | 419 | 7.40e-23 | 101 |
MS.gene90395.t1 | MTR_1g051175 | 42.391 | 92 | 49 | 3 | 48 | 138 | 21 | 109 | 1.85e-17 | 82.8 |
MS.gene90395.t1 | MTR_7g100560 | 28.821 | 229 | 91 | 7 | 38 | 264 | 55 | 213 | 8.32e-17 | 81.6 |
MS.gene90395.t1 | MTR_4g056520 | 28.324 | 173 | 110 | 6 | 56 | 225 | 36 | 197 | 2.92e-14 | 75.1 |
MS.gene90395.t1 | MTR_2g084530 | 33.333 | 153 | 89 | 5 | 56 | 205 | 36 | 178 | 2.10e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90395.t1 | AT4G30810 | 55.864 | 469 | 181 | 5 | 1 | 447 | 1 | 465 | 0.0 | 545 |
MS.gene90395.t1 | AT2G35780 | 52.830 | 424 | 186 | 6 | 32 | 451 | 24 | 437 | 1.94e-163 | 469 |
MS.gene90395.t1 | AT3G07990 | 51.152 | 434 | 199 | 7 | 23 | 451 | 18 | 443 | 3.99e-160 | 461 |
MS.gene90395.t1 | AT4G30610 | 47.228 | 451 | 220 | 8 | 11 | 451 | 6 | 448 | 7.02e-144 | 419 |
MS.gene90395.t1 | AT2G24000 | 47.332 | 431 | 208 | 8 | 32 | 451 | 25 | 447 | 8.09e-140 | 409 |
MS.gene90395.t1 | AT2G24010 | 47.706 | 436 | 196 | 10 | 32 | 444 | 25 | 451 | 6.72e-139 | 406 |
MS.gene90395.t1 | AT3G02110 | 43.469 | 467 | 238 | 9 | 1 | 451 | 1 | 457 | 4.57e-138 | 405 |
MS.gene90395.t1 | AT2G24010 | 45.898 | 451 | 197 | 11 | 32 | 444 | 25 | 466 | 1.58e-133 | 393 |
MS.gene90395.t1 | AT2G35770 | 43.946 | 446 | 236 | 8 | 8 | 451 | 11 | 444 | 1.92e-129 | 382 |
MS.gene90395.t1 | AT2G24010 | 43.590 | 468 | 193 | 11 | 40 | 444 | 3 | 462 | 2.91e-127 | 377 |
MS.gene90395.t1 | AT3G63470 | 42.227 | 431 | 231 | 10 | 26 | 453 | 70 | 485 | 1.85e-119 | 358 |
MS.gene90395.t1 | AT1G61130 | 43.029 | 416 | 221 | 8 | 42 | 448 | 35 | 443 | 2.49e-116 | 349 |
MS.gene90395.t1 | AT2G24010 | 48.619 | 362 | 158 | 9 | 40 | 381 | 3 | 356 | 9.35e-115 | 341 |
MS.gene90395.t1 | AT5G23210 | 42.188 | 448 | 223 | 10 | 30 | 451 | 44 | 481 | 9.65e-115 | 346 |
MS.gene90395.t1 | AT1G11080 | 38.793 | 464 | 257 | 8 | 7 | 451 | 20 | 475 | 1.88e-113 | 343 |
MS.gene90395.t1 | AT1G11080 | 39.103 | 468 | 252 | 9 | 9 | 451 | 16 | 475 | 2.65e-113 | 342 |
MS.gene90395.t1 | AT4G15100 | 38.877 | 463 | 253 | 10 | 9 | 451 | 15 | 467 | 6.48e-113 | 341 |
MS.gene90395.t1 | AT5G23210 | 43.614 | 415 | 201 | 9 | 30 | 418 | 44 | 451 | 6.68e-113 | 340 |
MS.gene90395.t1 | AT5G08260 | 38.661 | 463 | 260 | 10 | 3 | 448 | 4 | 459 | 1.82e-110 | 335 |
MS.gene90395.t1 | AT3G17180 | 41.542 | 402 | 214 | 6 | 33 | 418 | 34 | 430 | 1.23e-106 | 323 |
MS.gene90395.t1 | AT3G17180 | 40.275 | 437 | 234 | 8 | 33 | 451 | 34 | 461 | 2.03e-106 | 324 |
MS.gene90395.t1 | AT1G43780 | 36.188 | 467 | 271 | 13 | 1 | 451 | 1 | 456 | 5.34e-99 | 305 |
MS.gene90395.t1 | AT3G52000 | 37.875 | 433 | 249 | 12 | 24 | 451 | 48 | 465 | 2.26e-96 | 298 |
MS.gene90395.t1 | AT3G52020 | 38.337 | 433 | 248 | 13 | 26 | 453 | 68 | 486 | 2.94e-96 | 299 |
MS.gene90395.t1 | AT2G05850 | 37.590 | 415 | 243 | 9 | 42 | 451 | 67 | 470 | 7.90e-96 | 297 |
MS.gene90395.t1 | AT5G42240 | 38.863 | 422 | 239 | 8 | 42 | 451 | 36 | 450 | 8.76e-96 | 296 |
MS.gene90395.t1 | AT2G12480 | 37.352 | 423 | 251 | 7 | 35 | 451 | 29 | 443 | 2.85e-95 | 295 |
MS.gene90395.t1 | AT3G52010 | 38.369 | 417 | 240 | 11 | 40 | 451 | 66 | 470 | 4.91e-95 | 295 |
MS.gene90395.t1 | AT5G23210 | 41.237 | 388 | 195 | 7 | 90 | 451 | 6 | 386 | 8.63e-94 | 289 |
MS.gene90395.t1 | AT5G23210 | 41.039 | 385 | 194 | 7 | 93 | 451 | 8 | 385 | 8.41e-93 | 286 |
MS.gene90395.t1 | AT5G23210 | 42.614 | 352 | 172 | 6 | 93 | 418 | 8 | 355 | 4.86e-91 | 281 |
MS.gene90395.t1 | AT5G42230 | 33.921 | 454 | 278 | 10 | 12 | 451 | 1 | 446 | 1.86e-88 | 278 |
MS.gene90395.t1 | AT5G42230 | 33.921 | 454 | 278 | 10 | 12 | 451 | 1 | 446 | 1.86e-88 | 278 |
MS.gene90395.t1 | AT2G33530 | 38.739 | 444 | 224 | 15 | 36 | 444 | 32 | 462 | 2.42e-87 | 275 |
MS.gene90395.t1 | AT2G24000 | 36.427 | 431 | 192 | 10 | 32 | 451 | 25 | 384 | 1.40e-86 | 270 |
MS.gene90395.t1 | AT1G28110 | 36.446 | 439 | 239 | 12 | 36 | 444 | 30 | 458 | 1.70e-85 | 270 |
MS.gene90395.t1 | AT1G28110 | 36.446 | 439 | 239 | 12 | 36 | 444 | 30 | 458 | 1.70e-85 | 270 |
MS.gene90395.t1 | AT2G12480 | 35.392 | 421 | 238 | 7 | 35 | 451 | 29 | 419 | 1.68e-84 | 266 |
MS.gene90395.t1 | AT2G12480 | 35.154 | 421 | 238 | 7 | 35 | 451 | 29 | 418 | 5.13e-83 | 263 |
MS.gene90395.t1 | AT2G12480 | 35.154 | 421 | 237 | 7 | 35 | 451 | 29 | 417 | 6.96e-83 | 262 |
MS.gene90395.t1 | AT4G12910 | 32.520 | 492 | 271 | 11 | 6 | 451 | 8 | 484 | 1.36e-77 | 250 |
MS.gene90395.t1 | AT4G12910 | 32.826 | 460 | 250 | 10 | 6 | 419 | 8 | 454 | 2.81e-75 | 243 |
MS.gene90395.t1 | AT3G25420 | 33.333 | 456 | 245 | 12 | 42 | 448 | 33 | 478 | 1.63e-74 | 242 |
MS.gene90395.t1 | AT3G56540 | 54.971 | 171 | 71 | 5 | 26 | 196 | 68 | 232 | 1.63e-59 | 196 |
MS.gene90395.t1 | AT2G22990 | 29.245 | 424 | 271 | 12 | 38 | 452 | 22 | 425 | 6.01e-49 | 174 |
MS.gene90395.t1 | AT2G23000 | 30.488 | 410 | 248 | 12 | 38 | 433 | 24 | 410 | 9.23e-49 | 172 |
MS.gene90395.t1 | AT2G23000 | 30.488 | 410 | 248 | 12 | 38 | 433 | 24 | 410 | 9.23e-49 | 172 |
MS.gene90395.t1 | AT2G22970 | 30.549 | 419 | 252 | 13 | 34 | 439 | 20 | 412 | 1.12e-48 | 172 |
MS.gene90395.t1 | AT2G22990 | 29.877 | 405 | 255 | 12 | 38 | 433 | 22 | 406 | 4.06e-48 | 170 |
MS.gene90395.t1 | AT2G22970 | 30.288 | 416 | 252 | 12 | 34 | 437 | 20 | 409 | 5.46e-48 | 171 |
MS.gene90395.t1 | AT2G22990 | 29.877 | 405 | 255 | 12 | 38 | 433 | 22 | 406 | 6.39e-48 | 170 |
MS.gene90395.t1 | AT2G22970 | 30.751 | 413 | 247 | 13 | 34 | 433 | 20 | 406 | 8.80e-48 | 170 |
MS.gene90395.t1 | AT2G22920 | 29.567 | 416 | 260 | 10 | 28 | 433 | 16 | 408 | 2.57e-46 | 166 |
MS.gene90395.t1 | AT2G22920 | 30.203 | 394 | 243 | 9 | 28 | 412 | 16 | 386 | 2.68e-46 | 165 |
MS.gene90395.t1 | AT1G73280 | 29.208 | 404 | 257 | 10 | 38 | 433 | 32 | 414 | 1.17e-44 | 162 |
MS.gene90395.t1 | AT2G22980 | 28.675 | 415 | 257 | 12 | 38 | 441 | 25 | 411 | 1.68e-44 | 160 |
MS.gene90395.t1 | AT2G22980 | 28.873 | 426 | 263 | 13 | 38 | 452 | 25 | 421 | 1.88e-44 | 161 |
MS.gene90395.t1 | AT3G12203 | 30.100 | 402 | 251 | 10 | 40 | 433 | 10 | 389 | 2.09e-44 | 160 |
MS.gene90395.t1 | AT3G12203 | 29.691 | 421 | 264 | 11 | 21 | 433 | 14 | 410 | 2.52e-44 | 160 |
MS.gene90395.t1 | AT2G23010 | 28.864 | 440 | 274 | 12 | 7 | 436 | 2 | 412 | 5.28e-44 | 160 |
MS.gene90395.t1 | AT3G12230 | 28.960 | 404 | 258 | 10 | 38 | 433 | 26 | 408 | 5.86e-44 | 160 |
MS.gene90395.t1 | AT2G23010 | 29.224 | 438 | 270 | 13 | 7 | 433 | 2 | 410 | 8.46e-44 | 159 |
MS.gene90395.t1 | AT3G10450 | 29.024 | 410 | 259 | 11 | 38 | 438 | 28 | 414 | 1.06e-43 | 159 |
MS.gene90395.t1 | AT3G12240 | 30.296 | 406 | 250 | 11 | 38 | 433 | 27 | 409 | 2.20e-43 | 158 |
MS.gene90395.t1 | AT2G22980 | 28.747 | 407 | 251 | 12 | 38 | 433 | 25 | 403 | 3.44e-43 | 157 |
MS.gene90395.t1 | AT3G10450 | 28.095 | 420 | 267 | 11 | 38 | 448 | 28 | 421 | 4.58e-43 | 157 |
MS.gene90395.t1 | AT1G73270 | 29.412 | 408 | 247 | 12 | 40 | 433 | 34 | 414 | 1.16e-42 | 156 |
MS.gene90395.t1 | AT1G73270 | 29.412 | 408 | 247 | 12 | 40 | 433 | 34 | 414 | 1.37e-42 | 156 |
MS.gene90395.t1 | AT3G12220 | 29.319 | 382 | 242 | 9 | 38 | 412 | 26 | 386 | 1.54e-42 | 156 |
MS.gene90395.t1 | AT5G09640 | 28.784 | 403 | 242 | 12 | 40 | 412 | 28 | 415 | 3.19e-42 | 155 |
MS.gene90395.t1 | AT2G22990 | 28.889 | 405 | 250 | 13 | 38 | 433 | 22 | 397 | 2.54e-41 | 152 |
MS.gene90395.t1 | AT1G73310 | 27.941 | 408 | 266 | 10 | 38 | 438 | 32 | 418 | 2.71e-41 | 152 |
MS.gene90395.t1 | AT1G73300 | 27.723 | 404 | 263 | 10 | 38 | 433 | 32 | 414 | 3.10e-41 | 152 |
MS.gene90395.t1 | AT1G73300 | 27.723 | 404 | 263 | 10 | 38 | 433 | 32 | 414 | 3.10e-41 | 152 |
MS.gene90395.t1 | AT1G73290 | 27.763 | 389 | 253 | 9 | 31 | 412 | 22 | 389 | 4.17e-41 | 151 |
MS.gene90395.t1 | AT5G36180 | 27.711 | 415 | 271 | 10 | 38 | 444 | 32 | 425 | 7.91e-41 | 151 |
MS.gene90395.t1 | AT1G73290 | 27.763 | 389 | 253 | 9 | 31 | 412 | 22 | 389 | 1.13e-40 | 151 |
MS.gene90395.t1 | AT1G73310 | 27.805 | 410 | 266 | 11 | 38 | 440 | 32 | 418 | 1.30e-40 | 150 |
MS.gene90395.t1 | AT2G22970 | 32.573 | 307 | 171 | 9 | 34 | 313 | 20 | 317 | 1.50e-40 | 147 |
MS.gene90395.t1 | AT2G22920 | 34.307 | 274 | 166 | 6 | 28 | 294 | 16 | 282 | 7.55e-40 | 145 |
MS.gene90395.t1 | AT3G10450 | 28.645 | 391 | 247 | 11 | 57 | 438 | 4 | 371 | 9.44e-40 | 147 |
MS.gene90395.t1 | AT1G73280 | 32.432 | 296 | 171 | 8 | 38 | 309 | 32 | 322 | 1.32e-39 | 147 |
MS.gene90395.t1 | AT3G12220 | 28.926 | 363 | 230 | 9 | 57 | 412 | 15 | 356 | 1.50e-39 | 147 |
MS.gene90395.t1 | AT3G10450 | 27.681 | 401 | 255 | 11 | 57 | 448 | 4 | 378 | 2.30e-39 | 146 |
MS.gene90395.t1 | AT3G12203 | 29.412 | 374 | 234 | 10 | 68 | 433 | 1 | 352 | 3.64e-39 | 145 |
MS.gene90395.t1 | AT1G73290 | 31.734 | 271 | 173 | 5 | 31 | 294 | 22 | 287 | 2.24e-38 | 141 |
MS.gene90395.t1 | AT1G33540 | 28.878 | 419 | 258 | 13 | 42 | 433 | 32 | 437 | 3.86e-38 | 144 |
MS.gene90395.t1 | AT2G22980 | 34.831 | 267 | 153 | 8 | 38 | 294 | 25 | 280 | 8.44e-38 | 141 |
MS.gene90395.t1 | AT5G22980 | 27.427 | 412 | 258 | 14 | 51 | 448 | 96 | 480 | 1.28e-37 | 144 |
MS.gene90395.t1 | AT1G33540 | 28.713 | 404 | 248 | 13 | 57 | 433 | 4 | 394 | 3.78e-36 | 138 |
MS.gene90395.t1 | AT3G10410 | 27.791 | 421 | 247 | 14 | 53 | 451 | 99 | 484 | 4.25e-36 | 139 |
MS.gene90395.t1 | AT3G12220 | 33.466 | 251 | 153 | 6 | 38 | 282 | 26 | 268 | 1.34e-34 | 133 |
MS.gene90395.t1 | AT3G45010 | 28.125 | 352 | 212 | 13 | 51 | 388 | 99 | 423 | 2.28e-33 | 132 |
MS.gene90395.t1 | AT1G15000 | 38.764 | 178 | 96 | 6 | 55 | 228 | 37 | 205 | 6.85e-31 | 124 |
MS.gene90395.t1 | AT2G22990 | 27.419 | 310 | 203 | 9 | 128 | 433 | 1 | 292 | 6.89e-28 | 113 |
MS.gene90395.t1 | AT2G22990 | 27.419 | 310 | 203 | 9 | 128 | 433 | 1 | 292 | 7.03e-28 | 113 |
MS.gene90395.t1 | AT1G73280 | 25.796 | 314 | 211 | 7 | 123 | 433 | 18 | 312 | 1.62e-26 | 110 |
MS.gene90395.t1 | AT2G22980 | 25.625 | 320 | 206 | 9 | 128 | 441 | 1 | 294 | 3.05e-25 | 105 |
MS.gene90395.t1 | AT1G73310 | 24.843 | 318 | 218 | 7 | 123 | 438 | 18 | 316 | 3.33e-24 | 103 |
MS.gene90395.t1 | AT1G73280 | 25.490 | 306 | 206 | 7 | 131 | 433 | 1 | 287 | 9.35e-24 | 101 |
MS.gene90395.t1 | AT5G36180 | 25.625 | 320 | 215 | 8 | 123 | 439 | 18 | 317 | 2.03e-23 | 100 |
MS.gene90395.t1 | AT5G36180 | 25.228 | 329 | 218 | 8 | 123 | 446 | 18 | 323 | 2.87e-23 | 100 |
MS.gene90395.t1 | AT5G36180 | 24.615 | 325 | 223 | 7 | 123 | 444 | 18 | 323 | 3.29e-23 | 100 |
MS.gene90395.t1 | AT5G36180 | 24.615 | 325 | 223 | 7 | 123 | 444 | 18 | 323 | 3.29e-23 | 100 |
MS.gene90395.t1 | AT5G22960 | 31.928 | 166 | 88 | 5 | 53 | 218 | 34 | 174 | 1.23e-20 | 89.7 |
MS.gene90395.t1 | AT2G27920 | 28.324 | 173 | 112 | 6 | 56 | 225 | 37 | 200 | 2.84e-15 | 78.2 |
Find 98 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGTCCTTGTTGGACAAAT+TGG | 0.216839 | 2.3:+31519982 | None:intergenic |
TTCCTACTGGTCTGCGAATA+TGG | 0.221283 | 2.3:-31510512 | MS.gene90395:CDS |
GGTTGTTCTTCTATTGCTTA+TGG | 0.228301 | 2.3:-31519786 | MS.gene90395:CDS |
TCACCTTGATTCCAAGAATA+AGG | 0.266471 | 2.3:+31519702 | None:intergenic |
TATAAATTTCAAAGGTTTCA+TGG | 0.284809 | 2.3:-31518303 | MS.gene90395:intron |
GATCAACATGTAGAATCTTT+TGG | 0.295617 | 2.3:+31510988 | None:intergenic |
GTCTGCGAATATGGATATTC+AGG | 0.330589 | 2.3:-31510503 | MS.gene90395:intron |
ATCAGCTTTGAACATTATTC+TGG | 0.344117 | 2.3:-31519921 | MS.gene90395:CDS |
CAATCTTGTCCTGTCCTTGT+TGG | 0.353304 | 2.3:+31519973 | None:intergenic |
GTGGACAAATGGTATGATTT+CGG | 0.356676 | 2.3:-31518105 | MS.gene90395:CDS |
GGAAATTGCTGATAAAGAAA+TGG | 0.365053 | 2.3:-31518003 | MS.gene90395:CDS |
TATATGTCGAGTACTGTTCT+AGG | 0.371006 | 2.3:+31510546 | None:intergenic |
AAGAATAAGGATTAAAATGA+AGG | 0.376238 | 2.3:+31519715 | None:intergenic |
AATCCTTATTCTTGGAATCA+AGG | 0.389072 | 2.3:-31519705 | MS.gene90395:intron |
TGAGTCAATATAAAGAATAT+TGG | 0.390141 | 2.3:+31519603 | None:intergenic |
AATTAGAGACCACTTAGAAT+TGG | 0.406492 | 2.3:+31520061 | None:intergenic |
TATGGTGAAGCTGAGGAAAT+TGG | 0.416971 | 2.3:-31519768 | MS.gene90395:CDS |
CATGGAGGTTCCTGCTAAGA+AGG | 0.420125 | 2.3:+31510205 | None:intergenic |
CGAAAATCCCCAACTGATCA+TGG | 0.422919 | 2.3:+31518135 | None:intergenic |
TTATGGTTTAATGGTGGTCC+TGG | 0.423998 | 2.3:-31519807 | MS.gene90395:CDS |
ACAGTCCTGTGAAAGGATCT+TGG | 0.426722 | 2.3:-31518024 | MS.gene90395:CDS |
TTGCAATGTTACATTGGAAA+AGG | 0.427155 | 2.3:+31520009 | None:intergenic |
TTCGAGTTTATGTGGACAAA+TGG | 0.440512 | 2.3:-31518116 | MS.gene90395:CDS |
TTGATCAAAGCCTTCTTAGC+AGG | 0.443113 | 2.3:-31510215 | MS.gene90395:CDS |
GCACTGTGGTAAACACAAAC+TGG | 0.445189 | 2.3:-31510578 | MS.gene90395:CDS |
CCGTGAGCCCCTGGCGTGCA+TGG | 0.445833 | 2.3:-31510298 | MS.gene90395:CDS |
TATGAAAATCCAACTCCAAC+AGG | 0.447951 | 2.3:+31519580 | None:intergenic |
AGATCATAAGCCTGCTGAAT+GGG | 0.448872 | 2.3:-31510964 | MS.gene90395:CDS |
GTATAGCGAGTAGATGTTAC+CGG | 0.448892 | 2.3:+31510344 | None:intergenic |
GACGATTTCCATGATCAGTT+GGG | 0.450265 | 2.3:-31518143 | MS.gene90395:CDS |
TTCTTAACAACGGCGATAAG+AGG | 0.452379 | 2.3:-31519531 | MS.gene90395:CDS |
CATTCAGCAGGCTTATGATC+TGG | 0.453021 | 2.3:+31510966 | None:intergenic |
CCATCAGAATTAATATGAAA+AGG | 0.455112 | 2.3:+31519744 | None:intergenic |
GAAATTGCTGATAAAGAAAT+GGG | 0.456645 | 2.3:-31518002 | MS.gene90395:CDS |
AGCTTCCAACCGTGAGCCCC+TGG | 0.456902 | 2.3:-31510307 | MS.gene90395:CDS |
GGAGGAGTGAAGATACTGTA+TGG | 0.468358 | 2.3:+31517969 | None:intergenic |
CTGCAGGTCTCCCATTCAGC+AGG | 0.473733 | 2.3:+31510954 | None:intergenic |
ATCTCATATTTCTATTGAAG+TGG | 0.479798 | 2.3:-31518533 | MS.gene90395:CDS |
GTCATCATACCATGCACGCC+AGG | 0.480079 | 2.3:+31510289 | None:intergenic |
AAAAGAAGTGGTTTAGAAGT+AGG | 0.480423 | 2.3:+31519828 | None:intergenic |
CACAATTCTATAAATTTCAA+AGG | 0.480437 | 2.3:-31518311 | MS.gene90395:CDS |
GGCGTGCATGGTATGATGAC+GGG | 0.482407 | 2.3:-31510286 | MS.gene90395:CDS |
AAGATTGGTAGAGCACTTCC+AGG | 0.484784 | 2.3:-31519957 | MS.gene90395:CDS |
ATTGACTCACCTGTTGGAGT+TGG | 0.487702 | 2.3:-31519589 | MS.gene90395:CDS |
ATCAGCGGTGAGAGCTATGC+AGG | 0.488144 | 2.3:-31518471 | MS.gene90395:intron |
GCACGCCAGGGGCTCACGGT+TGG | 0.497915 | 2.3:+31510302 | None:intergenic |
CTGCTGAATGGGAGACCTGC+AGG | 0.498633 | 2.3:-31510953 | MS.gene90395:intron |
CTTTATATTGACTCACCTGT+TGG | 0.499451 | 2.3:-31519595 | MS.gene90395:CDS |
GCGGTGAGTGGTTCAAGAGT+TGG | 0.505258 | 2.3:+31510182 | None:intergenic |
GTTCATTGTCATCATAACAT+TGG | 0.506268 | 2.3:-31520036 | MS.gene90395:CDS |
AGTTGTACTTGACAATAACT+TGG | 0.508533 | 2.3:+31518345 | None:intergenic |
AGACGATTTCCATGATCAGT+TGG | 0.510824 | 2.3:-31518144 | MS.gene90395:CDS |
CAACAAGGACAGGACAAGAT+TGG | 0.511283 | 2.3:-31519972 | MS.gene90395:CDS |
TTGCCATGCTAATGATCAGC+AGG | 0.511849 | 2.3:-31517946 | MS.gene90395:CDS |
TATCGTGAACTTATTCCTAC+TGG | 0.513639 | 2.3:-31510525 | MS.gene90395:CDS |
AATTTCCAAGATCCTTTCAC+AGG | 0.515552 | 2.3:+31518019 | None:intergenic |
TGACCTGCTGATCATTAGCA+TGG | 0.552003 | 2.3:+31517943 | None:intergenic |
CCAATTTGTCCAACAAGGAC+AGG | 0.558813 | 2.3:-31519982 | MS.gene90395:CDS |
TAATACAGATGCGGTAATCC+CGG | 0.560059 | 2.3:-31510363 | MS.gene90395:CDS |
TGGTTATATAACAGTGAATG+AGG | 0.560384 | 2.3:-31519901 | MS.gene90395:CDS |
CAGATCATAAGCCTGCTGAA+TGG | 0.568427 | 2.3:-31510965 | MS.gene90395:CDS |
CCATTAAACCATAAAAGAAG+TGG | 0.570361 | 2.3:+31519816 | None:intergenic |
GAGTGGTTCAAGAGTTGGCA+TGG | 0.570776 | 2.3:+31510187 | None:intergenic |
TCATCATACCATGCACGCCA+GGG | 0.573326 | 2.3:+31510290 | None:intergenic |
GATCAAGAGGCGGCGGTGAG+TGG | 0.576418 | 2.3:+31510170 | None:intergenic |
ATAACAGTGAATGAGGATGT+TGG | 0.577186 | 2.3:-31519894 | MS.gene90395:CDS |
TGGCGTGCATGGTATGATGA+CGG | 0.579941 | 2.3:-31510287 | MS.gene90395:CDS |
CTGAAATGGCCAATTCTAAG+TGG | 0.580786 | 2.3:-31520070 | None:intergenic |
ACAATAACTTGGCTAAGTTG+AGG | 0.581298 | 2.3:+31518356 | None:intergenic |
TGCTGATCATTAGCATGGCA+AGG | 0.581714 | 2.3:+31517948 | None:intergenic |
ACGATTTCCATGATCAGTTG+GGG | 0.582348 | 2.3:-31518142 | MS.gene90395:CDS |
CCATGCACGCCAGGGGCTCA+CGG | 0.583994 | 2.3:+31510298 | None:intergenic |
ATCCTTCACAGTCCTGTGAA+AGG | 0.584239 | 2.3:-31518031 | MS.gene90395:CDS |
TCTTTCATGTAACAGAGTGT+TGG | 0.584932 | 2.3:-31511080 | MS.gene90395:intron |
GGTTTGTTGCAATGTTACAT+TGG | 0.601719 | 2.3:+31520003 | None:intergenic |
CAGTGAATGAGGATGTTGGT+AGG | 0.604941 | 2.3:-31519890 | MS.gene90395:CDS |
GAGGAGTGAAGATACTGTAT+GGG | 0.606990 | 2.3:+31517970 | None:intergenic |
ATCCTTTCACAGGACTGTGA+AGG | 0.607993 | 2.3:+31518029 | None:intergenic |
AACAACGGCGATAAGAGGAC+AGG | 0.619314 | 2.3:-31519526 | MS.gene90395:intron |
ACAACCATAACTTGATCAAG+AGG | 0.621399 | 2.3:+31510157 | None:intergenic |
TATTGCTTATGGTGAAGCTG+AGG | 0.624002 | 2.3:-31519775 | MS.gene90395:CDS |
ATCCATATTCGCAGACCAGT+AGG | 0.627927 | 2.3:+31510510 | None:intergenic |
GCGTGCATGGTATGATGACG+GGG | 0.628891 | 2.3:-31510285 | MS.gene90395:CDS |
ATAACTTGATCAAGAGGCGG+CGG | 0.630274 | 2.3:+31510163 | None:intergenic |
TATAGCGAGTAGATGTTACC+GGG | 0.637459 | 2.3:+31510345 | None:intergenic |
TGTGGTAAACACAAACTGGA+AGG | 0.642909 | 2.3:-31510574 | MS.gene90395:CDS |
CATCATACCATGCACGCCAG+GGG | 0.654327 | 2.3:+31510291 | None:intergenic |
TCTGATGACATTCTTAACAA+CGG | 0.660085 | 2.3:-31519541 | MS.gene90395:CDS |
ACAAACCAATTTGTCCAACA+AGG | 0.665724 | 2.3:-31519987 | MS.gene90395:CDS |
TGCCAGTGGTAATACAGATG+CGG | 0.670172 | 2.3:-31510372 | MS.gene90395:intron |
CAGAGTGTTGGAAGACTCAG+AGG | 0.672935 | 2.3:-31511068 | MS.gene90395:CDS |
ACCATAACTTGATCAAGAGG+CGG | 0.676966 | 2.3:+31510160 | None:intergenic |
TGGTTCAAGAGTTGGCATGG+AGG | 0.690653 | 2.3:+31510190 | None:intergenic |
TCTCATTCATTGCAGCACTG+TGG | 0.693510 | 2.3:-31510592 | MS.gene90395:intron |
TATATACTTCAATCGACCAG+AGG | 0.714316 | 2.3:-31511012 | MS.gene90395:CDS |
TGCATGGTATGATGACGGGG+AGG | 0.715312 | 2.3:-31510282 | MS.gene90395:CDS |
TAAGCAATAGAAGAACAACC+AGG | 0.719081 | 2.3:+31519789 | None:intergenic |
TGATCATTAGCATGGCAAGG+AGG | 0.733253 | 2.3:+31517951 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 31510172 | 31520087 | 31510172 | ID=MS.gene90395 |
chr2.3 | mRNA | 31510172 | 31520087 | 31510172 | ID=MS.gene90395.t1;Parent=MS.gene90395 |
chr2.3 | exon | 31519706 | 31520087 | 31519706 | ID=MS.gene90395.t1.exon1;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31519706 | 31520087 | 31519706 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
chr2.3 | exon | 31519527 | 31519628 | 31519527 | ID=MS.gene90395.t1.exon2;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31519527 | 31519628 | 31519527 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
chr2.3 | exon | 31518472 | 31518564 | 31518472 | ID=MS.gene90395.t1.exon3;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31518472 | 31518564 | 31518472 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
chr2.3 | exon | 31518304 | 31518389 | 31518304 | ID=MS.gene90395.t1.exon4;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31518304 | 31518389 | 31518304 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
chr2.3 | exon | 31517932 | 31518183 | 31517932 | ID=MS.gene90395.t1.exon5;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31517932 | 31518183 | 31517932 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
chr2.3 | exon | 31510954 | 31511087 | 31510954 | ID=MS.gene90395.t1.exon6;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31510954 | 31511087 | 31510954 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
chr2.3 | exon | 31510504 | 31510599 | 31510504 | ID=MS.gene90395.t1.exon7;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31510504 | 31510599 | 31510504 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
chr2.3 | exon | 31510172 | 31510388 | 31510172 | ID=MS.gene90395.t1.exon8;Parent=MS.gene90395.t1 |
chr2.3 | CDS | 31510172 | 31510388 | 31510172 | ID=cds.MS.gene90395.t1;Parent=MS.gene90395.t1 |
Gene Sequence |
Protein sequence |