Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051904.t1 | XP_013441621.1 | 100 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 1.10E-57 | 232.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051904.t1 | Q9LMK0 | 91.1 | 112 | 10 | 0 | 1 | 112 | 1 | 112 | 9.1e-56 | 217.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051904.t1 | I3T9M0 | 100.0 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 8.2e-58 | 232.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050134 | MS.gene051904 | 0.849122 | 3.96E-60 | -1.69E-46 |
| MS.gene050252 | MS.gene051904 | 0.838996 | 2.06E-57 | -1.69E-46 |
| MS.gene050281 | MS.gene051904 | 0.864951 | 8.40E-65 | -1.69E-46 |
| MS.gene050290 | MS.gene051904 | 0.84717 | 1.37E-59 | -1.69E-46 |
| MS.gene050791 | MS.gene051904 | 0.81677 | 4.66E-52 | -1.69E-46 |
| MS.gene051904 | MS.gene052664 | 0.824699 | 7.01E-54 | -1.69E-46 |
| MS.gene051904 | MS.gene053224 | 0.850223 | 1.95E-60 | -1.69E-46 |
| MS.gene051904 | MS.gene056917 | 0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene057272 | 0.832856 | 7.44E-56 | -1.69E-46 |
| MS.gene051904 | MS.gene057641 | 0.801958 | 7.04E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene057643 | 0.840232 | 9.85E-58 | -1.69E-46 |
| MS.gene051904 | MS.gene06617 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene06833 | 0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene07018 | 0.811034 | 8.57E-51 | -1.69E-46 |
| MS.gene051904 | MS.gene072589 | 0.81542 | 9.33E-52 | -1.69E-46 |
| MS.gene051904 | MS.gene072769 | 0.883318 | 4.97E-71 | -1.69E-46 |
| MS.gene051904 | MS.gene074593 | 0.858044 | 1.08E-62 | -1.69E-46 |
| MS.gene051904 | MS.gene074594 | 0.807467 | 4.98E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene08521 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene08870 | 0.806303 | 8.78E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene08871 | 0.835768 | 1.38E-56 | -1.69E-46 |
| MS.gene051904 | MS.gene20153 | 0.849257 | 3.63E-60 | -1.69E-46 |
| MS.gene051904 | MS.gene20766 | 0.849519 | 3.07E-60 | -1.69E-46 |
| MS.gene051904 | MS.gene21636 | 0.832748 | 7.92E-56 | -1.69E-46 |
| MS.gene051904 | MS.gene22784 | 0.807032 | 6.16E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene23031 | 0.826771 | 2.26E-54 | -1.69E-46 |
| MS.gene051904 | MS.gene23126 | 0.839842 | 1.24E-57 | -1.69E-46 |
| MS.gene051904 | MS.gene23437 | 0.904507 | 1.14E-79 | -1.69E-46 |
| MS.gene051904 | MS.gene24232 | 0.844235 | 8.57E-59 | -1.69E-46 |
| MS.gene051904 | MS.gene24639 | 0.819802 | 9.59E-53 | -1.69E-46 |
| MS.gene051904 | MS.gene24706 | 0.8467 | 1.84E-59 | -1.69E-46 |
| MS.gene051904 | MS.gene27265 | 0.805851 | 1.09E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene28147 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene29174 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene33166 | 0.846044 | 2.78E-59 | -1.69E-46 |
| MS.gene051904 | MS.gene34283 | 0.828843 | 7.18E-55 | -1.69E-46 |
| MS.gene051904 | MS.gene34284 | 0.826214 | 3.07E-54 | -1.69E-46 |
| MS.gene051904 | MS.gene34285 | 0.841651 | 4.18E-58 | -1.69E-46 |
| MS.gene051904 | MS.gene34372 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene36310 | 0.803687 | 3.09E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene37037 | 0.81342 | 2.58E-51 | -1.69E-46 |
| MS.gene051904 | MS.gene38222 | 0.806821 | 6.83E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene40831 | 0.820807 | 5.64E-53 | -1.69E-46 |
| MS.gene051904 | MS.gene43070 | 0.852097 | 5.77E-61 | -1.69E-46 |
| MS.gene051904 | MS.gene43071 | 0.852344 | 4.91E-61 | -1.69E-46 |
| MS.gene051904 | MS.gene43474 | 0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene46387 | 0.874639 | 5.77E-68 | -1.69E-46 |
| MS.gene051904 | MS.gene48048 | 0.822578 | 2.20E-53 | -1.69E-46 |
| MS.gene051904 | MS.gene50640 | 0.878726 | 2.22E-69 | -1.69E-46 |
| MS.gene051904 | MS.gene50756 | 0.847927 | 8.48E-60 | -1.69E-46 |
| MS.gene051904 | MS.gene50758 | 0.82848 | 8.78E-55 | -1.69E-46 |
| MS.gene051904 | MS.gene55619 | 0.810154 | 1.33E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene55890 | 0.857321 | 1.77E-62 | -1.69E-46 |
| MS.gene051904 | MS.gene61173 | 0.846715 | 1.82E-59 | -1.69E-46 |
| MS.gene051904 | MS.gene62561 | 0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene62791 | 0.871839 | 5.03E-67 | -1.69E-46 |
| MS.gene051904 | MS.gene72382 | 0.864595 | 1.09E-64 | -1.69E-46 |
| MS.gene051904 | MS.gene73000 | 0.827237 | 1.75E-54 | -1.69E-46 |
| MS.gene051904 | MS.gene74837 | 0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene051904 | MS.gene76031 | 0.845364 | 4.25E-59 | -1.69E-46 |
| MS.gene051904 | MS.gene81099 | 0.818602 | 1.80E-52 | -1.69E-46 |
| MS.gene051904 | MS.gene82038 | 0.837398 | 5.32E-57 | -1.69E-46 |
| MS.gene051904 | MS.gene82545 | 0.838138 | 3.44E-57 | -1.69E-46 |
| MS.gene051904 | MS.gene89608 | 0.834548 | 2.81E-56 | -1.69E-46 |
| MS.gene051904 | MS.gene89977 | 0.809099 | 2.24E-50 | -1.69E-46 |
| MS.gene051904 | MS.gene90723 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene051904 | MS.gene96225 | 0.857438 | 1.63E-62 | -1.69E-46 |
| MS.gene051904 | MS.gene96825 | 0.847324 | 1.24E-59 | -1.69E-46 |
| MS.gene051904 | MS.gene98113 | 0.831386 | 1.72E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051904 | MS.gene070073 | PPI |
| MS.gene051904 | MS.gene64512 | PPI |
| MS.gene051904 | MS.gene020215 | PPI |
| MS.gene051904 | MS.gene018553 | PPI |
| MS.gene051904 | MS.gene061905 | PPI |
| MS.gene051904 | MS.gene56696 | PPI |
| MS.gene051904 | MS.gene80639 | PPI |
| MS.gene051904 | MS.gene23058 | PPI |
| MS.gene051904 | MS.gene39294 | PPI |
| MS.gene051904 | MS.gene051903 | PPI |
| MS.gene051904 | MS.gene45646 | PPI |
| MS.gene56696 | MS.gene051904 | PPI |
| MS.gene29581 | MS.gene051904 | PPI |
| MS.gene051904 | MS.gene23059 | PPI |
| MS.gene051904 | MS.gene09845 | PPI |
| MS.gene051904 | MS.gene007067 | PPI |
| MS.gene051904 | MS.gene022752 | PPI |
| MS.gene051904 | MS.gene29581 | PPI |
| MS.gene051904 | MS.gene007066 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051904.t1 | MTR_0699s0020 | 100.000 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 2.57e-79 | 228 |
| MS.gene051904.t1 | MTR_0699s0010 | 99.107 | 112 | 1 | 0 | 1 | 112 | 1 | 112 | 1.25e-78 | 226 |
| MS.gene051904.t1 | MTR_5g081705 | 94.643 | 112 | 6 | 0 | 1 | 112 | 26 | 137 | 5.74e-77 | 223 |
| MS.gene051904.t1 | MTR_5g081705 | 94.949 | 99 | 5 | 0 | 1 | 99 | 26 | 124 | 2.98e-67 | 198 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051904.t1 | AT1G74270 | 91.964 | 112 | 9 | 0 | 1 | 112 | 1 | 112 | 6.63e-74 | 214 |
| MS.gene051904.t1 | AT1G07070 | 91.071 | 112 | 10 | 0 | 1 | 112 | 1 | 112 | 7.40e-74 | 214 |
| MS.gene051904.t1 | AT3G55750 | 87.387 | 111 | 14 | 0 | 2 | 112 | 1 | 111 | 4.97e-71 | 207 |
| MS.gene051904.t1 | AT1G41880 | 86.486 | 111 | 15 | 0 | 2 | 112 | 1 | 111 | 7.54e-71 | 207 |
| MS.gene051904.t1 | AT1G41880 | 86.486 | 111 | 15 | 0 | 2 | 112 | 1 | 111 | 7.54e-71 | 207 |
Find 48 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAGATTTGACTTGAATT+TGG | 0.232635 | 7.1:+6134268 | None:intergenic |
| TTAAATTATTACCATTGATT+TGG | 0.240677 | 7.1:+6134244 | None:intergenic |
| TGGTGTTCACTCCTTCAATT+TGG | 0.242520 | 7.1:+6134426 | None:intergenic |
| TAAATTATTACCATTGATTT+GGG | 0.268294 | 7.1:+6134245 | None:intergenic |
| GCCCCATATGCAGCGGTAAT+GGG | 0.380708 | 7.1:+6134331 | None:intergenic |
| CCAGAGATGTGTTTGGGTAC+TGG | 0.398125 | 7.1:+6134450 | None:intergenic |
| ATTTGGACCAGAGATGTGTT+TGG | 0.405595 | 7.1:+6134443 | None:intergenic |
| GAACCCATTACCGCTGCATA+TGG | 0.409627 | 7.1:-6134334 | MS.gene051904:CDS |
| TGCCCCATATGCAGCGGTAA+TGG | 0.410420 | 7.1:+6134330 | None:intergenic |
| GACGTCAAGGAGAGCGTGTC+AGG | 0.412439 | 7.1:-6135105 | MS.gene051904:intron |
| TTTGGACCAGAGATGTGTTT+GGG | 0.422500 | 7.1:+6134444 | None:intergenic |
| TTGGTATGCTGGCAAGAAAA+TGG | 0.428506 | 7.1:-6134390 | MS.gene051904:CDS |
| AGTTTACCTCATATATTGCT+TGG | 0.429962 | 7.1:+6134116 | None:intergenic |
| GAAGAGGTAGCTTGGTATGC+TGG | 0.459649 | 7.1:-6134401 | MS.gene051904:CDS |
| AACCCATTACCGCTGCATAT+GGG | 0.459805 | 7.1:-6134333 | MS.gene051904:CDS |
| ACATCTCTGGTCCAAATTGA+AGG | 0.462436 | 7.1:-6134437 | MS.gene051904:CDS |
| GTTTACCTCATATATTGCTT+GGG | 0.467769 | 7.1:+6134117 | None:intergenic |
| TACGTGAGGGGTACAATCCT+TGG | 0.470557 | 7.1:-6134570 | MS.gene051904:CDS |
| GGTTCCATTCTTCTTCACCT+TGG | 0.492441 | 7.1:+6134352 | None:intergenic |
| GTACAATCCTTGGATACAAA+AGG | 0.498010 | 7.1:-6134560 | MS.gene051904:intron |
| AAGGCCAAGGTGAAGAAGAA+TGG | 0.517743 | 7.1:-6134356 | MS.gene051904:CDS |
| GTTTGGGTACTGGTTTACTT+TGG | 0.518411 | 7.1:+6134460 | None:intergenic |
| ATACCAAGCTACCTCTTCCT+TGG | 0.523366 | 7.1:+6134406 | None:intergenic |
| GCATATGGGGCAAGGTTACA+AGG | 0.526923 | 7.1:-6134319 | MS.gene051904:CDS |
| CCAGTACCCAAACACATCTC+TGG | 0.530530 | 7.1:-6134450 | MS.gene051904:CDS |
| TTGTATTAGGCTTTACGTGA+GGG | 0.533599 | 7.1:-6134583 | MS.gene051904:intron |
| ACCCATTACCGCTGCATATG+GGG | 0.539984 | 7.1:-6134332 | MS.gene051904:CDS |
| TTTGTATTAGGCTTTACGTG+AGG | 0.553810 | 7.1:-6134584 | MS.gene051904:intron |
| AGGAGTGAACACCAAGGAAG+AGG | 0.555068 | 7.1:-6134417 | MS.gene051904:CDS |
| ATGTACCCAAGCAATATATG+AGG | 0.556382 | 7.1:-6134122 | None:intergenic |
| AATTATTACCATTGATTTGG+GGG | 0.558553 | 7.1:+6134247 | None:intergenic |
| GGCATATATCTACAAGGCCA+AGG | 0.574061 | 7.1:-6134369 | MS.gene051904:CDS |
| AAATTATTACCATTGATTTG+GGG | 0.588097 | 7.1:+6134246 | None:intergenic |
| ACACCAAGGAAGAGGTAGCT+TGG | 0.593143 | 7.1:-6134409 | MS.gene051904:CDS |
| GTACATAAATACTCTTACGC+GGG | 0.601920 | 7.1:+6134139 | None:intergenic |
| TGTATTAGGCTTTACGTGAG+GGG | 0.604275 | 7.1:-6134582 | MS.gene051904:intron |
| GGCAAGGTTACAAGGCCACA+TGG | 0.606069 | 7.1:-6134311 | MS.gene051904:CDS |
| AAGATGGTGAAGGGACGTCA+AGG | 0.609822 | 7.1:-6135118 | MS.gene051904:CDS |
| ATTATTACCATTGATTTGGG+GGG | 0.627666 | 7.1:+6134248 | None:intergenic |
| GAAAATGGCATATATCTACA+AGG | 0.630318 | 7.1:-6134375 | MS.gene051904:CDS |
| GGTACATAAATACTCTTACG+CGG | 0.638869 | 7.1:+6134138 | None:intergenic |
| TTACCGCTGCATATGGGGCA+AGG | 0.645005 | 7.1:-6134327 | MS.gene051904:CDS |
| AGTTGCCGTGAAGATGGTGA+AGG | 0.661868 | 7.1:-6135128 | None:intergenic |
| TAACCTTGCCCCATATGCAG+CGG | 0.677626 | 7.1:+6134324 | None:intergenic |
| ACAAGGCCACATGGTAACAG+TGG | 0.690947 | 7.1:-6134302 | MS.gene051904:CDS |
| GTTGCCGTGAAGATGGTGAA+GGG | 0.718264 | 7.1:-6135127 | None:intergenic |
| ACAATACCACTGTTACCATG+TGG | 0.724821 | 7.1:+6134296 | None:intergenic |
| AATTGAAGGAGTGAACACCA+AGG | 0.776962 | 7.1:-6134423 | MS.gene051904:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATATTAGCTTATTATA+TGG | + | chr7.1:6134624-6134643 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTAATCATCATTT+GGG | - | chr7.1:6135031-6135050 | MS.gene051904:intron | 10.0% |
| !!! | TTTTTTTTTTAATCATCATT+TGG | - | chr7.1:6135030-6135049 | MS.gene051904:intron | 10.0% |
| !!! | AAACATGAAAATTTTCAAAT+TGG | + | chr7.1:6134533-6134552 | None:intergenic | 15.0% |
| !!! | ATCATTGTTTTTAATTCATT+TGG | - | chr7.1:6134284-6134303 | MS.gene051904:CDS | 15.0% |
| !!! | ATTTATTTTTGAATGATAGT+AGG | + | chr7.1:6134343-6134362 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTCATTTGTATT+AGG | - | chr7.1:6134643-6134662 | MS.gene051904:intron | 15.0% |
| !!! | TAAATTATTACCATTGATTT+GGG | + | chr7.1:6134997-6135016 | None:intergenic | 15.0% |
| !!! | TTAAATTATTACCATTGATT+TGG | + | chr7.1:6134998-6135017 | None:intergenic | 15.0% |
| !!! | AAATTATTACCATTGATTTG+GGG | + | chr7.1:6134996-6135015 | None:intergenic | 20.0% |
| ! | TAGTTTACAGAGTAAAGTAA+AGG | - | chr7.1:6134406-6134425 | MS.gene051904:CDS | 25.0% |
| !! | ACTTTTCTAATGAAAATGTC+TGG | - | chr7.1:6134705-6134724 | MS.gene051904:intron | 25.0% |
| !! | TATCAGACACTTATATTTTG+TGG | - | chr7.1:6134505-6134524 | MS.gene051904:intron | 25.0% |
| !!! | AATTATTACCATTGATTTGG+GGG | + | chr7.1:6134995-6135014 | None:intergenic | 25.0% |
| ATCTGAAAATCAACTGTATC+TGG | + | chr7.1:6134481-6134500 | None:intergenic | 30.0% | |
| GAAAATGGCATATATCTACA+AGG | - | chr7.1:6134864-6134883 | MS.gene051904:intron | 30.0% | |
| TCGTGTTTGGATTAATTTCA+GGG | - | chr7.1:6135075-6135094 | MS.gene051904:intron | 30.0% | |
| TGTTATCTTAATCTCGTGTT+TGG | - | chr7.1:6135062-6135081 | MS.gene051904:intron | 30.0% | |
| ! | AAGTTTACCTTTTGTATCCA+AGG | + | chr7.1:6134689-6134708 | None:intergenic | 30.0% |
| !! | ATTATTACCATTGATTTGGG+GGG | + | chr7.1:6134994-6135013 | None:intergenic | 30.0% |
| AAATGTCTGGTTAGATGCTT+TGG | - | chr7.1:6134718-6134737 | MS.gene051904:intron | 35.0% | |
| CTCGTGTTTGGATTAATTTC+AGG | - | chr7.1:6135074-6135093 | MS.gene051904:intron | 35.0% | |
| GAAAATCAACTGTATCTGGT+TGG | + | chr7.1:6134477-6134496 | None:intergenic | 35.0% | |
| GGTACATAAATACTCTTACG+CGG | + | chr7.1:6135104-6135123 | None:intergenic | 35.0% | |
| GTACAATCCTTGGATACAAA+AGG | - | chr7.1:6134679-6134698 | MS.gene051904:intron | 35.0% | |
| GTACATAAATACTCTTACGC+GGG | + | chr7.1:6135103-6135122 | None:intergenic | 35.0% | |
| TTGTATTAGGCTTTACGTGA+GGG | - | chr7.1:6134656-6134675 | MS.gene051904:intron | 35.0% | |
| TTTGTATTAGGCTTTACGTG+AGG | - | chr7.1:6134655-6134674 | MS.gene051904:intron | 35.0% | |
| !! | GGGAAGATTTGACTTGAATT+TGG | + | chr7.1:6134974-6134993 | None:intergenic | 35.0% |
| AAATCTTCCCCCCAAATCAA+TGG | - | chr7.1:6134984-6135003 | MS.gene051904:intron | 40.0% | |
| AATTGAAGGAGTGAACACCA+AGG | - | chr7.1:6134816-6134835 | MS.gene051904:intron | 40.0% | |
| ACAATACCACTGTTACCATG+TGG | + | chr7.1:6134946-6134965 | None:intergenic | 40.0% | |
| ACATCTCTGGTCCAAATTGA+AGG | - | chr7.1:6134802-6134821 | MS.gene051904:intron | 40.0% | |
| ATTTGGACCAGAGATGTGTT+TGG | + | chr7.1:6134799-6134818 | None:intergenic | 40.0% | |
| TGGTGTTCACTCCTTCAATT+TGG | + | chr7.1:6134816-6134835 | None:intergenic | 40.0% | |
| TGTATTAGGCTTTACGTGAG+GGG | - | chr7.1:6134657-6134676 | MS.gene051904:intron | 40.0% | |
| TTGGTATGCTGGCAAGAAAA+TGG | - | chr7.1:6134849-6134868 | MS.gene051904:intron | 40.0% | |
| TTTGGACCAGAGATGTGTTT+GGG | + | chr7.1:6134798-6134817 | None:intergenic | 40.0% | |
| !! | GTTTGGGTACTGGTTTACTT+TGG | + | chr7.1:6134782-6134801 | None:intergenic | 40.0% |
| AACCCATTACCGCTGCATAT+GGG | - | chr7.1:6134906-6134925 | MS.gene051904:intron | 45.0% | |
| AAGGCCAAGGTGAAGAAGAA+TGG | - | chr7.1:6134883-6134902 | MS.gene051904:intron | 45.0% | |
| ATACCAAGCTACCTCTTCCT+TGG | + | chr7.1:6134836-6134855 | None:intergenic | 45.0% | |
| GGCATATATCTACAAGGCCA+AGG | - | chr7.1:6134870-6134889 | MS.gene051904:intron | 45.0% | |
| GGTTCCATTCTTCTTCACCT+TGG | + | chr7.1:6134890-6134909 | None:intergenic | 45.0% | |
| ACAAGGCCACATGGTAACAG+TGG | - | chr7.1:6134937-6134956 | MS.gene051904:intron | 50.0% | |
| ACACCAAGGAAGAGGTAGCT+TGG | - | chr7.1:6134830-6134849 | MS.gene051904:intron | 50.0% | |
| ACCCATTACCGCTGCATATG+GGG | - | chr7.1:6134907-6134926 | MS.gene051904:intron | 50.0% | |
| AGGAGTGAACACCAAGGAAG+AGG | - | chr7.1:6134822-6134841 | MS.gene051904:intron | 50.0% | |
| CCAGAGATGTGTTTGGGTAC+TGG | + | chr7.1:6134792-6134811 | None:intergenic | 50.0% | |
| CCAGTACCCAAACACATCTC+TGG | - | chr7.1:6134789-6134808 | MS.gene051904:intron | 50.0% | |
| GAACCCATTACCGCTGCATA+TGG | - | chr7.1:6134905-6134924 | MS.gene051904:intron | 50.0% | |
| GAAGAGGTAGCTTGGTATGC+TGG | - | chr7.1:6134838-6134857 | MS.gene051904:intron | 50.0% | |
| GCATATGGGGCAAGGTTACA+AGG | - | chr7.1:6134920-6134939 | MS.gene051904:intron | 50.0% | |
| TAACCTTGCCCCATATGCAG+CGG | + | chr7.1:6134918-6134937 | None:intergenic | 50.0% | |
| ! | TACGTGAGGGGTACAATCCT+TGG | - | chr7.1:6134669-6134688 | MS.gene051904:intron | 50.0% |
| GCCCCATATGCAGCGGTAAT+GGG | + | chr7.1:6134911-6134930 | None:intergenic | 55.0% | |
| GGCAAGGTTACAAGGCCACA+TGG | - | chr7.1:6134928-6134947 | MS.gene051904:intron | 55.0% | |
| TGCCCCATATGCAGCGGTAA+TGG | + | chr7.1:6134912-6134931 | None:intergenic | 55.0% | |
| TTACCGCTGCATATGGGGCA+AGG | - | chr7.1:6134912-6134931 | MS.gene051904:intron | 55.0% | |
| ! | GACGTCAAGGAGAGCGTGTC+AGG | - | chr7.1:6134134-6134153 | MS.gene051904:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 6134124 | 6135137 | 6134124 | ID=MS.gene051904 |
| chr7.1 | mRNA | 6134124 | 6135137 | 6134124 | ID=MS.gene051904.t1;Parent=MS.gene051904 |
| chr7.1 | exon | 6135106 | 6135137 | 6135106 | ID=MS.gene051904.t1.exon1;Parent=MS.gene051904.t1 |
| chr7.1 | CDS | 6135106 | 6135137 | 6135106 | ID=cds.MS.gene051904.t1;Parent=MS.gene051904.t1 |
| chr7.1 | exon | 6134561 | 6134596 | 6134561 | ID=MS.gene051904.t1.exon2;Parent=MS.gene051904.t1 |
| chr7.1 | CDS | 6134561 | 6134596 | 6134561 | ID=cds.MS.gene051904.t1;Parent=MS.gene051904.t1 |
| chr7.1 | exon | 6134256 | 6134484 | 6134256 | ID=MS.gene051904.t1.exon3;Parent=MS.gene051904.t1 |
| chr7.1 | CDS | 6134256 | 6134484 | 6134256 | ID=cds.MS.gene051904.t1;Parent=MS.gene051904.t1 |
| chr7.1 | exon | 6134124 | 6134165 | 6134124 | ID=MS.gene051904.t1.exon4;Parent=MS.gene051904.t1 |
| chr7.1 | CDS | 6134124 | 6134165 | 6134124 | ID=cds.MS.gene051904.t1;Parent=MS.gene051904.t1 |
| Gene Sequence |
| Protein sequence |
