Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92248.t1 | XP_003595892.1 | 90.5 | 472 | 26 | 2 | 1 | 453 | 1 | 472 | 2.20E-253 | 884.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92248.t1 | P55748 | 61.3 | 432 | 140 | 5 | 42 | 449 | 4 | 432 | 1.5e-157 | 557.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92248.t1 | G7IT50 | 90.5 | 472 | 26 | 2 | 1 | 453 | 1 | 472 | 1.6e-253 | 884.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92248.t1 | MTR_2g063000 | 91.525 | 472 | 21 | 2 | 1 | 453 | 1 | 472 | 0.0 | 886 |
MS.gene92248.t1 | MTR_2g063000 | 84.958 | 472 | 21 | 3 | 1 | 453 | 1 | 441 | 0.0 | 806 |
MS.gene92248.t1 | MTR_2g062990 | 80.882 | 476 | 63 | 6 | 1 | 453 | 1 | 471 | 0.0 | 781 |
MS.gene92248.t1 | MTR_2g081620 | 77.707 | 471 | 82 | 4 | 1 | 450 | 1 | 469 | 0.0 | 748 |
MS.gene92248.t1 | MTR_2g062980 | 77.987 | 477 | 75 | 7 | 1 | 452 | 1 | 472 | 0.0 | 746 |
MS.gene92248.t1 | MTR_1g095560 | 53.725 | 443 | 192 | 7 | 14 | 451 | 8 | 442 | 3.36e-169 | 483 |
MS.gene92248.t1 | MTR_1g095560 | 55.583 | 412 | 173 | 6 | 14 | 420 | 8 | 414 | 9.35e-167 | 478 |
MS.gene92248.t1 | MTR_1g095540 | 51.316 | 456 | 203 | 8 | 1 | 451 | 1 | 442 | 2.80e-160 | 461 |
MS.gene92248.t1 | MTR_7g013790 | 44.540 | 467 | 223 | 9 | 9 | 446 | 7 | 466 | 2.63e-141 | 413 |
MS.gene92248.t1 | MTR_3g079590 | 48.317 | 416 | 200 | 8 | 36 | 451 | 76 | 476 | 1.45e-135 | 399 |
MS.gene92248.t1 | MTR_3g079570 | 47.115 | 416 | 204 | 9 | 36 | 451 | 77 | 476 | 8.38e-134 | 395 |
MS.gene92248.t1 | MTR_3g079560 | 45.000 | 440 | 224 | 11 | 13 | 451 | 54 | 476 | 8.88e-131 | 387 |
MS.gene92248.t1 | MTR_3g079600 | 45.161 | 434 | 215 | 11 | 26 | 451 | 59 | 477 | 3.76e-128 | 380 |
MS.gene92248.t1 | MTR_3g034290 | 43.678 | 435 | 228 | 9 | 24 | 453 | 56 | 478 | 3.77e-126 | 375 |
MS.gene92248.t1 | MTR_3g079630 | 44.321 | 449 | 219 | 12 | 16 | 451 | 54 | 484 | 1.95e-124 | 371 |
MS.gene92248.t1 | MTR_1g021010 | 46.860 | 414 | 200 | 10 | 40 | 451 | 77 | 472 | 2.05e-124 | 370 |
MS.gene92248.t1 | MTR_3g079620 | 44.471 | 425 | 211 | 10 | 36 | 451 | 76 | 484 | 7.19e-123 | 367 |
MS.gene92248.t1 | MTR_1g020090 | 45.803 | 417 | 204 | 12 | 36 | 451 | 88 | 483 | 8.67e-123 | 367 |
MS.gene92248.t1 | MTR_2g012860 | 44.286 | 420 | 213 | 8 | 42 | 448 | 45 | 456 | 1.38e-122 | 365 |
MS.gene92248.t1 | MTR_4g122950 | 41.176 | 476 | 238 | 9 | 8 | 445 | 7 | 478 | 2.35e-122 | 365 |
MS.gene92248.t1 | MTR_1g021020 | 46.283 | 417 | 204 | 10 | 36 | 451 | 76 | 473 | 4.01e-122 | 365 |
MS.gene92248.t1 | MTR_4g075150 | 45.116 | 430 | 215 | 12 | 32 | 451 | 29 | 447 | 3.73e-121 | 361 |
MS.gene92248.t1 | MTR_4g075150 | 44.676 | 432 | 216 | 12 | 32 | 451 | 29 | 449 | 4.21e-120 | 358 |
MS.gene92248.t1 | MTR_0003s0560 | 43.780 | 418 | 219 | 10 | 35 | 451 | 71 | 473 | 7.49e-118 | 354 |
MS.gene92248.t1 | MTR_4g122960 | 40.717 | 474 | 241 | 9 | 8 | 445 | 7 | 476 | 6.79e-117 | 351 |
MS.gene92248.t1 | MTR_4g089155 | 42.381 | 420 | 221 | 9 | 42 | 448 | 57 | 468 | 2.66e-116 | 350 |
MS.gene92248.t1 | MTR_2g012850 | 41.509 | 424 | 229 | 9 | 36 | 448 | 33 | 448 | 1.60e-114 | 344 |
MS.gene92248.t1 | MTR_3g034290 | 45.730 | 363 | 182 | 8 | 24 | 381 | 56 | 408 | 6.96e-112 | 336 |
MS.gene92248.t1 | MTR_3g090130 | 37.560 | 418 | 246 | 8 | 42 | 451 | 32 | 442 | 1.77e-95 | 295 |
MS.gene92248.t1 | MTR_5g072570 | 37.086 | 453 | 257 | 11 | 13 | 451 | 9 | 447 | 3.53e-95 | 295 |
MS.gene92248.t1 | MTR_2g449850 | 38.876 | 445 | 219 | 16 | 36 | 445 | 37 | 463 | 2.01e-90 | 282 |
MS.gene92248.t1 | MTR_3g434850 | 38.341 | 446 | 222 | 16 | 36 | 446 | 29 | 456 | 2.88e-90 | 282 |
MS.gene92248.t1 | MTR_3g090150 | 36.493 | 422 | 247 | 10 | 42 | 451 | 37 | 449 | 5.97e-90 | 281 |
MS.gene92248.t1 | MTR_8g099930 | 36.404 | 445 | 228 | 13 | 1 | 418 | 1 | 417 | 1.24e-87 | 275 |
MS.gene92248.t1 | MTR_1g040370 | 36.111 | 432 | 208 | 12 | 36 | 444 | 29 | 415 | 1.01e-84 | 266 |
MS.gene92248.t1 | MTR_3g498755 | 36.036 | 444 | 242 | 13 | 36 | 446 | 13 | 447 | 4.13e-84 | 266 |
MS.gene92248.t1 | MTR_0003s0560 | 46.350 | 274 | 139 | 7 | 35 | 307 | 71 | 337 | 3.07e-83 | 260 |
MS.gene92248.t1 | MTR_7g021130 | 34.943 | 435 | 240 | 12 | 42 | 444 | 34 | 457 | 1.78e-80 | 256 |
MS.gene92248.t1 | MTR_8g011350 | 32.917 | 480 | 265 | 12 | 20 | 451 | 12 | 482 | 1.23e-73 | 240 |
MS.gene92248.t1 | MTR_8g011350 | 33.185 | 449 | 245 | 11 | 20 | 420 | 12 | 453 | 9.07e-72 | 234 |
MS.gene92248.t1 | MTR_7g051430 | 29.939 | 491 | 286 | 11 | 10 | 451 | 1 | 482 | 7.22e-67 | 222 |
MS.gene92248.t1 | MTR_7g080180 | 31.646 | 474 | 255 | 16 | 35 | 451 | 24 | 485 | 2.24e-64 | 216 |
MS.gene92248.t1 | MTR_7g080180 | 32.280 | 443 | 233 | 15 | 35 | 420 | 24 | 456 | 1.16e-63 | 213 |
MS.gene92248.t1 | MTR_7g051430 | 37.748 | 302 | 178 | 6 | 10 | 306 | 1 | 297 | 2.91e-58 | 197 |
MS.gene92248.t1 | MTR_1g102130 | 31.429 | 455 | 254 | 16 | 10 | 448 | 61 | 473 | 1.54e-54 | 189 |
MS.gene92248.t1 | MTR_4g021510 | 28.806 | 427 | 269 | 13 | 42 | 448 | 42 | 453 | 1.49e-46 | 167 |
MS.gene92248.t1 | MTR_4g021535 | 30.216 | 417 | 249 | 15 | 42 | 433 | 39 | 438 | 1.07e-45 | 165 |
MS.gene92248.t1 | MTR_2g018590 | 27.966 | 472 | 291 | 16 | 3 | 448 | 5 | 453 | 1.19e-44 | 162 |
MS.gene92248.t1 | MTR_4g021530 | 28.954 | 411 | 262 | 13 | 42 | 433 | 43 | 442 | 1.23e-44 | 162 |
MS.gene92248.t1 | MTR_4g021520 | 28.140 | 430 | 268 | 12 | 42 | 448 | 43 | 454 | 1.41e-44 | 162 |
MS.gene92248.t1 | MTR_4g021520 | 28.750 | 400 | 246 | 11 | 42 | 418 | 43 | 426 | 5.41e-44 | 159 |
MS.gene92248.t1 | MTR_2g018600 | 28.241 | 432 | 278 | 13 | 38 | 448 | 33 | 453 | 2.14e-43 | 159 |
MS.gene92248.t1 | MTR_4g021500 | 28.873 | 426 | 270 | 14 | 42 | 448 | 43 | 454 | 9.63e-43 | 161 |
MS.gene92248.t1 | MTR_4g021500 | 27.033 | 418 | 274 | 11 | 49 | 448 | 485 | 889 | 3.71e-40 | 154 |
MS.gene92248.t1 | MTR_4g021500 | 28.873 | 426 | 270 | 14 | 42 | 448 | 43 | 454 | 1.31e-42 | 161 |
MS.gene92248.t1 | MTR_4g021500 | 28.362 | 409 | 262 | 14 | 49 | 448 | 485 | 871 | 3.97e-40 | 154 |
MS.gene92248.t1 | MTR_2g018630 | 28.883 | 412 | 267 | 12 | 38 | 433 | 36 | 437 | 1.44e-42 | 156 |
MS.gene92248.t1 | MTR_3g100420 | 26.226 | 469 | 298 | 14 | 8 | 444 | 24 | 476 | 5.61e-42 | 155 |
MS.gene92248.t1 | MTR_4g021490 | 27.294 | 425 | 278 | 14 | 42 | 448 | 43 | 454 | 6.22e-40 | 149 |
MS.gene92248.t1 | MTR_3g045770 | 26.698 | 427 | 283 | 11 | 38 | 448 | 26 | 438 | 5.43e-38 | 144 |
MS.gene92248.t1 | MTR_4g057585 | 28.947 | 418 | 247 | 13 | 53 | 451 | 96 | 482 | 6.91e-38 | 144 |
MS.gene92248.t1 | MTR_2g095730 | 25.778 | 450 | 276 | 15 | 24 | 451 | 71 | 484 | 8.60e-38 | 144 |
MS.gene92248.t1 | MTR_4g057570 | 27.660 | 423 | 256 | 13 | 50 | 451 | 86 | 479 | 1.16e-37 | 144 |
MS.gene92248.t1 | MTR_4g057595 | 28.708 | 418 | 248 | 13 | 53 | 451 | 97 | 483 | 1.35e-37 | 144 |
MS.gene92248.t1 | MTR_1g050545 | 40.196 | 204 | 116 | 5 | 51 | 254 | 81 | 278 | 1.27e-36 | 140 |
MS.gene92248.t1 | MTR_2g095750 | 28.169 | 426 | 241 | 16 | 53 | 451 | 100 | 487 | 2.38e-36 | 140 |
MS.gene92248.t1 | MTR_0075s0010 | 26.579 | 380 | 193 | 13 | 35 | 401 | 5 | 311 | 3.18e-33 | 128 |
MS.gene92248.t1 | MTR_2g009200 | 26.265 | 415 | 241 | 12 | 30 | 419 | 19 | 393 | 3.72e-32 | 127 |
MS.gene92248.t1 | MTR_1g094155 | 39.773 | 176 | 99 | 5 | 53 | 228 | 90 | 258 | 5.61e-32 | 128 |
MS.gene92248.t1 | MTR_4g057600 | 30.314 | 287 | 167 | 8 | 53 | 313 | 95 | 374 | 4.64e-31 | 125 |
MS.gene92248.t1 | MTR_4g021535 | 26.619 | 417 | 217 | 16 | 42 | 433 | 39 | 391 | 7.77e-30 | 120 |
MS.gene92248.t1 | MTR_5g097180 | 25.060 | 419 | 259 | 16 | 55 | 453 | 43 | 426 | 1.96e-28 | 117 |
MS.gene92248.t1 | MTR_2g018630 | 27.193 | 342 | 216 | 11 | 110 | 433 | 6 | 332 | 4.19e-26 | 108 |
MS.gene92248.t1 | MTR_4g084710 | 25.060 | 419 | 259 | 15 | 55 | 453 | 45 | 428 | 1.65e-25 | 108 |
MS.gene92248.t1 | MTR_2g095710 | 25.455 | 385 | 245 | 13 | 24 | 402 | 71 | 419 | 1.16e-22 | 100 |
MS.gene92248.t1 | MTR_1g051175 | 42.391 | 92 | 49 | 3 | 48 | 138 | 21 | 109 | 2.09e-17 | 82.4 |
MS.gene92248.t1 | MTR_7g100560 | 28.821 | 229 | 91 | 7 | 38 | 264 | 55 | 213 | 7.94e-17 | 81.6 |
MS.gene92248.t1 | MTR_4g056520 | 28.324 | 173 | 110 | 6 | 56 | 225 | 36 | 197 | 3.37e-14 | 74.7 |
MS.gene92248.t1 | MTR_2g084530 | 33.333 | 153 | 89 | 5 | 56 | 205 | 36 | 178 | 2.19e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92248.t1 | AT4G30810 | 55.864 | 469 | 181 | 5 | 1 | 447 | 1 | 465 | 0.0 | 544 |
MS.gene92248.t1 | AT2G35780 | 52.830 | 424 | 186 | 6 | 32 | 451 | 24 | 437 | 2.16e-163 | 469 |
MS.gene92248.t1 | AT3G07990 | 51.152 | 434 | 199 | 7 | 23 | 451 | 18 | 443 | 5.84e-160 | 460 |
MS.gene92248.t1 | AT4G30610 | 47.020 | 453 | 219 | 9 | 9 | 451 | 7 | 448 | 3.31e-144 | 420 |
MS.gene92248.t1 | AT2G24000 | 47.332 | 431 | 208 | 8 | 32 | 451 | 25 | 447 | 1.05e-139 | 409 |
MS.gene92248.t1 | AT2G24010 | 47.706 | 436 | 196 | 10 | 32 | 444 | 25 | 451 | 7.91e-139 | 406 |
MS.gene92248.t1 | AT3G02110 | 43.683 | 467 | 237 | 9 | 1 | 451 | 1 | 457 | 1.03e-138 | 406 |
MS.gene92248.t1 | AT2G24010 | 45.898 | 451 | 197 | 11 | 32 | 444 | 25 | 466 | 1.43e-133 | 393 |
MS.gene92248.t1 | AT2G35770 | 44.369 | 444 | 233 | 8 | 10 | 451 | 13 | 444 | 1.22e-129 | 383 |
MS.gene92248.t1 | AT2G24010 | 43.590 | 468 | 193 | 11 | 40 | 444 | 3 | 462 | 3.54e-127 | 377 |
MS.gene92248.t1 | AT3G63470 | 42.155 | 427 | 228 | 10 | 32 | 453 | 73 | 485 | 1.24e-118 | 356 |
MS.gene92248.t1 | AT1G61130 | 41.348 | 445 | 242 | 9 | 13 | 448 | 9 | 443 | 5.34e-117 | 351 |
MS.gene92248.t1 | AT2G24010 | 48.619 | 362 | 158 | 9 | 40 | 381 | 3 | 356 | 8.21e-115 | 341 |
MS.gene92248.t1 | AT5G23210 | 42.188 | 448 | 223 | 10 | 30 | 451 | 44 | 481 | 1.15e-114 | 346 |
MS.gene92248.t1 | AT1G11080 | 38.936 | 470 | 254 | 9 | 7 | 451 | 14 | 475 | 1.37e-113 | 343 |
MS.gene92248.t1 | AT1G11080 | 38.936 | 470 | 254 | 9 | 7 | 451 | 14 | 475 | 1.44e-113 | 343 |
MS.gene92248.t1 | AT5G23210 | 43.614 | 415 | 201 | 9 | 30 | 418 | 44 | 451 | 8.02e-113 | 340 |
MS.gene92248.t1 | AT4G15100 | 38.793 | 464 | 254 | 10 | 8 | 451 | 14 | 467 | 1.52e-112 | 340 |
MS.gene92248.t1 | AT5G08260 | 39.046 | 461 | 252 | 11 | 10 | 448 | 6 | 459 | 1.36e-110 | 335 |
MS.gene92248.t1 | AT3G17180 | 41.542 | 402 | 214 | 6 | 33 | 418 | 34 | 430 | 1.23e-106 | 323 |
MS.gene92248.t1 | AT3G17180 | 40.275 | 437 | 234 | 8 | 33 | 451 | 34 | 461 | 1.64e-106 | 324 |
MS.gene92248.t1 | AT1G43780 | 35.974 | 467 | 272 | 14 | 1 | 451 | 1 | 456 | 1.39e-98 | 304 |
MS.gene92248.t1 | AT3G52000 | 37.875 | 433 | 249 | 12 | 24 | 451 | 48 | 465 | 4.04e-96 | 298 |
MS.gene92248.t1 | AT2G05850 | 36.259 | 433 | 260 | 9 | 24 | 451 | 49 | 470 | 4.67e-96 | 298 |
MS.gene92248.t1 | AT2G12480 | 36.364 | 451 | 270 | 9 | 7 | 451 | 4 | 443 | 9.30e-96 | 296 |
MS.gene92248.t1 | AT5G42240 | 38.863 | 422 | 239 | 8 | 42 | 451 | 36 | 450 | 9.86e-96 | 296 |
MS.gene92248.t1 | AT3G52020 | 39.386 | 391 | 223 | 10 | 32 | 418 | 73 | 453 | 1.09e-95 | 297 |
MS.gene92248.t1 | AT3G52010 | 38.369 | 417 | 240 | 11 | 40 | 451 | 66 | 470 | 4.51e-95 | 295 |
MS.gene92248.t1 | AT5G23210 | 41.237 | 388 | 195 | 7 | 90 | 451 | 6 | 386 | 9.61e-94 | 289 |
MS.gene92248.t1 | AT5G23210 | 41.039 | 385 | 194 | 7 | 93 | 451 | 8 | 385 | 8.23e-93 | 286 |
MS.gene92248.t1 | AT5G23210 | 42.614 | 352 | 172 | 6 | 93 | 418 | 8 | 355 | 5.77e-91 | 280 |
MS.gene92248.t1 | AT5G42230 | 35.308 | 422 | 254 | 8 | 42 | 451 | 32 | 446 | 1.94e-88 | 277 |
MS.gene92248.t1 | AT5G42230 | 35.308 | 422 | 254 | 8 | 42 | 451 | 32 | 446 | 1.94e-88 | 277 |
MS.gene92248.t1 | AT2G33530 | 38.739 | 444 | 224 | 15 | 36 | 444 | 32 | 462 | 2.02e-87 | 275 |
MS.gene92248.t1 | AT2G24000 | 36.427 | 431 | 192 | 10 | 32 | 451 | 25 | 384 | 1.95e-86 | 270 |
MS.gene92248.t1 | AT1G28110 | 36.446 | 439 | 239 | 12 | 36 | 444 | 30 | 458 | 1.45e-85 | 270 |
MS.gene92248.t1 | AT1G28110 | 36.446 | 439 | 239 | 12 | 36 | 444 | 30 | 458 | 1.45e-85 | 270 |
MS.gene92248.t1 | AT2G12480 | 34.521 | 449 | 257 | 9 | 7 | 451 | 4 | 419 | 3.39e-85 | 268 |
MS.gene92248.t1 | AT2G12480 | 34.298 | 449 | 257 | 9 | 7 | 451 | 4 | 418 | 1.07e-83 | 265 |
MS.gene92248.t1 | AT2G12480 | 34.298 | 449 | 256 | 9 | 7 | 451 | 4 | 417 | 1.84e-83 | 264 |
MS.gene92248.t1 | AT4G12910 | 32.927 | 492 | 269 | 12 | 6 | 451 | 8 | 484 | 3.68e-78 | 251 |
MS.gene92248.t1 | AT4G12910 | 33.261 | 460 | 248 | 11 | 6 | 419 | 8 | 454 | 5.56e-76 | 245 |
MS.gene92248.t1 | AT3G25420 | 33.333 | 456 | 245 | 12 | 42 | 448 | 33 | 478 | 1.04e-74 | 243 |
MS.gene92248.t1 | AT3G56540 | 53.179 | 173 | 76 | 4 | 24 | 196 | 65 | 232 | 7.33e-59 | 194 |
MS.gene92248.t1 | AT2G22990 | 29.245 | 424 | 271 | 12 | 38 | 452 | 22 | 425 | 7.16e-49 | 173 |
MS.gene92248.t1 | AT2G23000 | 30.488 | 410 | 248 | 12 | 38 | 433 | 24 | 410 | 9.14e-49 | 172 |
MS.gene92248.t1 | AT2G23000 | 30.488 | 410 | 248 | 12 | 38 | 433 | 24 | 410 | 9.14e-49 | 172 |
MS.gene92248.t1 | AT2G22970 | 30.549 | 419 | 252 | 13 | 34 | 439 | 20 | 412 | 9.89e-49 | 172 |
MS.gene92248.t1 | AT2G22990 | 29.877 | 405 | 255 | 12 | 38 | 433 | 22 | 406 | 4.46e-48 | 170 |
MS.gene92248.t1 | AT2G22970 | 30.288 | 416 | 252 | 12 | 34 | 437 | 20 | 409 | 5.58e-48 | 171 |
MS.gene92248.t1 | AT2G22990 | 29.877 | 405 | 255 | 12 | 38 | 433 | 22 | 406 | 7.01e-48 | 170 |
MS.gene92248.t1 | AT2G22970 | 30.751 | 413 | 247 | 13 | 34 | 433 | 20 | 406 | 8.71e-48 | 170 |
MS.gene92248.t1 | AT2G22920 | 29.557 | 406 | 255 | 9 | 38 | 433 | 24 | 408 | 5.19e-46 | 165 |
MS.gene92248.t1 | AT2G22920 | 30.208 | 384 | 238 | 8 | 38 | 412 | 24 | 386 | 5.41e-46 | 164 |
MS.gene92248.t1 | AT1G73280 | 28.506 | 435 | 280 | 11 | 7 | 433 | 3 | 414 | 8.12e-45 | 162 |
MS.gene92248.t1 | AT2G22980 | 28.873 | 426 | 263 | 13 | 38 | 452 | 25 | 421 | 1.58e-44 | 161 |
MS.gene92248.t1 | AT2G22980 | 28.675 | 415 | 257 | 12 | 38 | 441 | 25 | 411 | 1.61e-44 | 160 |
MS.gene92248.t1 | AT3G12203 | 30.100 | 402 | 251 | 10 | 40 | 433 | 10 | 389 | 2.34e-44 | 160 |
MS.gene92248.t1 | AT3G12203 | 30.100 | 402 | 251 | 10 | 40 | 433 | 31 | 410 | 2.63e-44 | 160 |
MS.gene92248.t1 | AT3G12230 | 28.960 | 404 | 258 | 10 | 38 | 433 | 26 | 408 | 5.63e-44 | 160 |
MS.gene92248.t1 | AT3G10450 | 29.024 | 410 | 259 | 11 | 38 | 438 | 28 | 414 | 1.44e-43 | 158 |
MS.gene92248.t1 | AT3G12240 | 30.296 | 406 | 250 | 11 | 38 | 433 | 27 | 409 | 2.17e-43 | 158 |
MS.gene92248.t1 | AT2G22980 | 28.747 | 407 | 251 | 12 | 38 | 433 | 25 | 403 | 3.40e-43 | 157 |
MS.gene92248.t1 | AT2G23010 | 29.340 | 409 | 259 | 10 | 38 | 436 | 24 | 412 | 4.05e-43 | 157 |
MS.gene92248.t1 | AT3G10450 | 28.395 | 405 | 259 | 10 | 38 | 433 | 28 | 410 | 4.87e-43 | 157 |
MS.gene92248.t1 | AT2G23010 | 29.730 | 407 | 255 | 11 | 38 | 433 | 24 | 410 | 4.92e-43 | 157 |
MS.gene92248.t1 | AT1G73270 | 29.412 | 408 | 247 | 12 | 40 | 433 | 34 | 414 | 1.28e-42 | 156 |
MS.gene92248.t1 | AT1G73270 | 29.412 | 408 | 247 | 12 | 40 | 433 | 34 | 414 | 1.61e-42 | 156 |
MS.gene92248.t1 | AT3G12220 | 29.319 | 382 | 242 | 9 | 38 | 412 | 26 | 386 | 1.72e-42 | 155 |
MS.gene92248.t1 | AT5G09640 | 28.276 | 435 | 257 | 14 | 10 | 412 | 4 | 415 | 2.11e-42 | 156 |
MS.gene92248.t1 | AT1G73310 | 27.941 | 408 | 266 | 10 | 38 | 438 | 32 | 418 | 2.42e-41 | 152 |
MS.gene92248.t1 | AT2G22990 | 28.889 | 405 | 250 | 13 | 38 | 433 | 22 | 397 | 2.44e-41 | 152 |
MS.gene92248.t1 | AT1G73300 | 27.723 | 404 | 263 | 10 | 38 | 433 | 32 | 414 | 2.83e-41 | 152 |
MS.gene92248.t1 | AT1G73300 | 27.723 | 404 | 263 | 10 | 38 | 433 | 32 | 414 | 2.83e-41 | 152 |
MS.gene92248.t1 | AT1G73290 | 27.763 | 389 | 253 | 9 | 31 | 412 | 22 | 389 | 4.72e-41 | 151 |
MS.gene92248.t1 | AT5G36180 | 27.711 | 415 | 271 | 10 | 38 | 444 | 32 | 425 | 9.99e-41 | 151 |
MS.gene92248.t1 | AT1G73290 | 27.763 | 389 | 253 | 9 | 31 | 412 | 22 | 389 | 1.05e-40 | 151 |
MS.gene92248.t1 | AT1G73310 | 27.805 | 410 | 266 | 11 | 38 | 440 | 32 | 418 | 1.55e-40 | 150 |
MS.gene92248.t1 | AT2G22970 | 32.573 | 307 | 171 | 9 | 34 | 313 | 20 | 317 | 1.61e-40 | 147 |
MS.gene92248.t1 | AT3G10450 | 28.645 | 391 | 247 | 11 | 57 | 438 | 4 | 371 | 9.35e-40 | 147 |
MS.gene92248.t1 | AT3G12220 | 28.926 | 363 | 230 | 9 | 57 | 412 | 15 | 356 | 1.42e-39 | 147 |
MS.gene92248.t1 | AT1G73280 | 31.193 | 327 | 194 | 9 | 7 | 309 | 3 | 322 | 1.58e-39 | 146 |
MS.gene92248.t1 | AT2G22920 | 34.470 | 264 | 161 | 5 | 38 | 294 | 24 | 282 | 1.78e-39 | 145 |
MS.gene92248.t1 | AT3G10450 | 27.681 | 401 | 255 | 11 | 57 | 448 | 4 | 378 | 1.98e-39 | 146 |
MS.gene92248.t1 | AT3G12203 | 29.412 | 374 | 234 | 10 | 68 | 433 | 1 | 352 | 3.64e-39 | 145 |
MS.gene92248.t1 | AT1G73290 | 31.734 | 271 | 173 | 5 | 31 | 294 | 22 | 287 | 2.77e-38 | 141 |
MS.gene92248.t1 | AT1G33540 | 28.878 | 419 | 258 | 13 | 42 | 433 | 32 | 437 | 3.42e-38 | 144 |
MS.gene92248.t1 | AT2G22980 | 34.831 | 267 | 153 | 8 | 38 | 294 | 25 | 280 | 1.05e-37 | 141 |
MS.gene92248.t1 | AT5G22980 | 27.427 | 412 | 258 | 14 | 51 | 448 | 96 | 480 | 1.33e-37 | 144 |
MS.gene92248.t1 | AT1G33540 | 28.713 | 404 | 248 | 13 | 57 | 433 | 4 | 394 | 2.94e-36 | 138 |
MS.gene92248.t1 | AT3G10410 | 27.791 | 421 | 247 | 14 | 53 | 451 | 99 | 484 | 3.29e-36 | 140 |
MS.gene92248.t1 | AT3G12220 | 33.466 | 251 | 153 | 6 | 38 | 282 | 26 | 268 | 1.33e-34 | 133 |
MS.gene92248.t1 | AT3G45010 | 28.125 | 352 | 212 | 13 | 51 | 388 | 99 | 423 | 1.80e-33 | 132 |
MS.gene92248.t1 | AT1G15000 | 38.764 | 178 | 96 | 6 | 55 | 228 | 37 | 205 | 7.48e-31 | 124 |
MS.gene92248.t1 | AT2G22990 | 27.419 | 310 | 203 | 9 | 128 | 433 | 1 | 292 | 6.24e-28 | 113 |
MS.gene92248.t1 | AT2G22990 | 27.419 | 310 | 203 | 9 | 128 | 433 | 1 | 292 | 7.24e-28 | 113 |
MS.gene92248.t1 | AT1G73280 | 25.796 | 314 | 211 | 7 | 123 | 433 | 18 | 312 | 1.47e-26 | 110 |
MS.gene92248.t1 | AT2G22980 | 25.625 | 320 | 206 | 9 | 128 | 441 | 1 | 294 | 2.73e-25 | 105 |
MS.gene92248.t1 | AT1G73310 | 24.843 | 318 | 218 | 7 | 123 | 438 | 18 | 316 | 4.04e-24 | 102 |
MS.gene92248.t1 | AT1G73280 | 25.490 | 306 | 206 | 7 | 131 | 433 | 1 | 287 | 9.53e-24 | 101 |
MS.gene92248.t1 | AT5G36180 | 25.625 | 320 | 215 | 8 | 123 | 439 | 18 | 317 | 2.03e-23 | 100 |
MS.gene92248.t1 | AT5G36180 | 25.228 | 329 | 218 | 8 | 123 | 446 | 18 | 323 | 2.34e-23 | 100 |
MS.gene92248.t1 | AT5G36180 | 24.615 | 325 | 223 | 7 | 123 | 444 | 18 | 323 | 3.51e-23 | 100 |
MS.gene92248.t1 | AT5G36180 | 24.615 | 325 | 223 | 7 | 123 | 444 | 18 | 323 | 3.51e-23 | 100 |
MS.gene92248.t1 | AT5G22960 | 31.928 | 166 | 88 | 5 | 53 | 218 | 34 | 174 | 1.25e-20 | 89.7 |
MS.gene92248.t1 | AT2G27920 | 28.324 | 173 | 112 | 6 | 56 | 225 | 37 | 200 | 2.77e-15 | 78.2 |
Find 98 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTACTGGTCTGCGAATA+TGG | 0.221283 | 2.1:-33062688 | MS.gene92248:CDS |
GGTTGTTCTTCTATTGCTTA+TGG | 0.228301 | 2.1:-33075053 | MS.gene92248:CDS |
TCACCTTGATTCCAAGAATA+AGG | 0.266471 | 2.1:+33074969 | None:intergenic |
TATAAATTTCAAAGGTTTCA+TGG | 0.284809 | 2.1:-33070480 | MS.gene92248:intron |
GATCAACATGTAGAATCTTT+TGG | 0.295617 | 2.1:+33063164 | None:intergenic |
TCCTGTCCTTGTTGGACAAA+TGG | 0.319796 | 2.1:+33075248 | None:intergenic |
GTCTGCGAATATGGATATTC+AGG | 0.330589 | 2.1:-33062679 | MS.gene92248:intron |
ATCAGCTTTGAACATTATTC+TGG | 0.344117 | 2.1:-33075188 | MS.gene92248:CDS |
CAATCTTGTCCTGTCCTTGT+TGG | 0.353304 | 2.1:+33075240 | None:intergenic |
GTGGACAAATGGTATGATTT+CGG | 0.356676 | 2.1:-33070282 | MS.gene92248:CDS |
GGAAATTGCTGATAAAGAAA+TGG | 0.365053 | 2.1:-33070180 | MS.gene92248:CDS |
TATATGTCGAGTACTGTTCT+AGG | 0.371006 | 2.1:+33062722 | None:intergenic |
TTGCAATGTTACATTGGAAA+AGG | 0.372020 | 2.1:+33075276 | None:intergenic |
AAGAATAAGGATTAAAATGA+AGG | 0.376238 | 2.1:+33074982 | None:intergenic |
AATCCTTATTCTTGGAATCA+AGG | 0.389072 | 2.1:-33074972 | MS.gene92248:intron |
TGAGTCAATATAAAGAATAT+TGG | 0.390141 | 2.1:+33074869 | None:intergenic |
TATTTGAGACCACTTAGAAT+TGG | 0.412853 | 2.1:+33075328 | None:intergenic |
TATGGTGAAGCTGAGGAAAT+TGG | 0.416971 | 2.1:-33075035 | MS.gene92248:CDS |
CATGGAGGTTCCTGCTAAGA+AGG | 0.420125 | 2.1:+33062381 | None:intergenic |
CGAAAATCCCCAACTGATCA+TGG | 0.422919 | 2.1:+33070312 | None:intergenic |
ACAGTCCTGTGAAAGGATCT+TGG | 0.426722 | 2.1:-33070201 | MS.gene92248:CDS |
CCATCTGAATTAATATGAAA+AGG | 0.429688 | 2.1:+33075011 | None:intergenic |
TTCGAGTTTATGTGGACAAA+TGG | 0.440512 | 2.1:-33070293 | MS.gene92248:CDS |
TTGATCAAAGCCTTCTTAGC+AGG | 0.443113 | 2.1:-33062391 | MS.gene92248:CDS |
GCACTGTGGTAAACACAAAC+TGG | 0.445189 | 2.1:-33062754 | MS.gene92248:CDS |
CCGTGAGCCCCTGGCGTGCA+TGG | 0.445833 | 2.1:-33062474 | MS.gene92248:CDS |
TATGAAAATCCAACTCCAAC+AGG | 0.447951 | 2.1:+33074846 | None:intergenic |
AGATCATAAGCCTGCTGAAT+GGG | 0.448872 | 2.1:-33063140 | MS.gene92248:CDS |
GTATAGCGAGTAGATGTTAC+CGG | 0.448892 | 2.1:+33062520 | None:intergenic |
GACGATTTCCATGATCAGTT+GGG | 0.450265 | 2.1:-33070320 | MS.gene92248:CDS |
CATTCAGCAGGCTTATGATC+TGG | 0.453021 | 2.1:+33063142 | None:intergenic |
TTCTCAACAACGGCGATAAG+AGG | 0.454675 | 2.1:-33074797 | MS.gene92248:CDS |
GAAATTGCTGATAAAGAAAT+GGG | 0.456645 | 2.1:-33070179 | MS.gene92248:CDS |
AGCTTCCAACCGTGAGCCCC+TGG | 0.456902 | 2.1:-33062483 | MS.gene92248:CDS |
GGAGGAGTGAAGATACTGTA+TGG | 0.468358 | 2.1:+33070146 | None:intergenic |
CTGCAGGTCTCCCATTCAGC+AGG | 0.473733 | 2.1:+33063130 | None:intergenic |
ATCTCATATTTCTATTGAAG+TGG | 0.479798 | 2.1:-33070710 | MS.gene92248:CDS |
GTCATCATACCATGCACGCC+AGG | 0.480079 | 2.1:+33062465 | None:intergenic |
CACAATTCTATAAATTTCAA+AGG | 0.480437 | 2.1:-33070488 | MS.gene92248:CDS |
GGCGTGCATGGTATGATGAC+GGG | 0.482407 | 2.1:-33062462 | MS.gene92248:CDS |
AAGATTGGTAGAGCACTTCC+AGG | 0.484784 | 2.1:-33075224 | MS.gene92248:CDS |
ATTGACTCACCTGTTGGAGT+TGG | 0.487702 | 2.1:-33074855 | MS.gene92248:CDS |
ATCAGCGGTGAGAGCTATGC+AGG | 0.488144 | 2.1:-33070648 | MS.gene92248:intron |
GCACGCCAGGGGCTCACGGT+TGG | 0.497915 | 2.1:+33062478 | None:intergenic |
CTGCTGAATGGGAGACCTGC+AGG | 0.498633 | 2.1:-33063129 | MS.gene92248:intron |
CTTTATATTGACTCACCTGT+TGG | 0.499451 | 2.1:-33074861 | MS.gene92248:CDS |
GCGGTGAGTGGTTCAAGAGT+TGG | 0.505258 | 2.1:+33062358 | None:intergenic |
GTTCATTGTCATCATAACAT+TGG | 0.506268 | 2.1:-33075303 | MS.gene92248:CDS |
AGTTGTACTTGACAATAACT+TGG | 0.508533 | 2.1:+33070522 | None:intergenic |
ACCATTTGTCCAACAAGGAC+AGG | 0.509689 | 2.1:-33075249 | MS.gene92248:CDS |
AGACGATTTCCATGATCAGT+TGG | 0.510824 | 2.1:-33070321 | MS.gene92248:CDS |
CAACAAGGACAGGACAAGAT+TGG | 0.511283 | 2.1:-33075239 | MS.gene92248:CDS |
TTGCCATGCTAATGATCAGC+AGG | 0.511849 | 2.1:-33070123 | MS.gene92248:CDS |
TATCGTGAACTTATTCCTAC+TGG | 0.513639 | 2.1:-33062701 | MS.gene92248:CDS |
AAAAGTAGTGGCTTAGAAGT+AGG | 0.514146 | 2.1:+33075095 | None:intergenic |
AATTTCCAAGATCCTTTCAC+AGG | 0.515552 | 2.1:+33070196 | None:intergenic |
TGCAATGTTACATTGGAAAA+GGG | 0.529664 | 2.1:+33075277 | None:intergenic |
TGACCTGCTGATCATTAGCA+TGG | 0.552003 | 2.1:+33070120 | None:intergenic |
GTTCTGTTGCAATGTTACAT+TGG | 0.557162 | 2.1:+33075270 | None:intergenic |
TAATACAGATGCGGTAATCC+CGG | 0.560059 | 2.1:-33062539 | MS.gene92248:CDS |
TGGTTATATAACAGTGAATG+AGG | 0.560384 | 2.1:-33075168 | MS.gene92248:CDS |
CAGATCATAAGCCTGCTGAA+TGG | 0.568427 | 2.1:-33063141 | MS.gene92248:CDS |
GAGTGGTTCAAGAGTTGGCA+TGG | 0.570776 | 2.1:+33062363 | None:intergenic |
TCATCATACCATGCACGCCA+GGG | 0.573326 | 2.1:+33062466 | None:intergenic |
GATCAAGAGGCGGCGGTGAG+TGG | 0.576418 | 2.1:+33062346 | None:intergenic |
ATAACAGTGAATGAGGATGT+TGG | 0.577186 | 2.1:-33075161 | MS.gene92248:CDS |
TGGCGTGCATGGTATGATGA+CGG | 0.579941 | 2.1:-33062463 | MS.gene92248:CDS |
ACAATAACTTGGCTAAGTTG+AGG | 0.581298 | 2.1:+33070533 | None:intergenic |
TGCTGATCATTAGCATGGCA+AGG | 0.581714 | 2.1:+33070125 | None:intergenic |
ACGATTTCCATGATCAGTTG+GGG | 0.582348 | 2.1:-33070319 | MS.gene92248:CDS |
CCATGCACGCCAGGGGCTCA+CGG | 0.583994 | 2.1:+33062474 | None:intergenic |
ATCCTTCACAGTCCTGTGAA+AGG | 0.584239 | 2.1:-33070208 | MS.gene92248:CDS |
TCTTTCATGTAACAGAGTGT+TGG | 0.584932 | 2.1:-33063256 | MS.gene92248:intron |
CTGAAATGGCCAATTCTAAG+TGG | 0.595959 | 2.1:-33075337 | None:intergenic |
CAGTGAATGAGGATGTTGGT+AGG | 0.604941 | 2.1:-33075157 | MS.gene92248:CDS |
GAGGAGTGAAGATACTGTAT+GGG | 0.606990 | 2.1:+33070147 | None:intergenic |
ATCCTTTCACAGGACTGTGA+AGG | 0.607993 | 2.1:+33070206 | None:intergenic |
AACAACGGCGATAAGAGGAC+AGG | 0.614127 | 2.1:-33074792 | MS.gene92248:intron |
ACAACCATAACTTGATCAAG+AGG | 0.621399 | 2.1:+33062333 | None:intergenic |
CCATTAAACCATAAAAGTAG+TGG | 0.623474 | 2.1:+33075083 | None:intergenic |
TATTGCTTATGGTGAAGCTG+AGG | 0.624002 | 2.1:-33075042 | MS.gene92248:CDS |
ATCCATATTCGCAGACCAGT+AGG | 0.627927 | 2.1:+33062686 | None:intergenic |
GCGTGCATGGTATGATGACG+GGG | 0.628891 | 2.1:-33062461 | MS.gene92248:CDS |
ATAACTTGATCAAGAGGCGG+CGG | 0.630274 | 2.1:+33062339 | None:intergenic |
TATAGCGAGTAGATGTTACC+GGG | 0.637459 | 2.1:+33062521 | None:intergenic |
TGTGGTAAACACAAACTGGA+AGG | 0.642909 | 2.1:-33062750 | MS.gene92248:CDS |
CATCATACCATGCACGCCAG+GGG | 0.654327 | 2.1:+33062467 | None:intergenic |
TGCCAGTGGTAATACAGATG+CGG | 0.670172 | 2.1:-33062548 | MS.gene92248:intron |
CAGAGTGTTGGAAGACTCAG+AGG | 0.672935 | 2.1:-33063244 | MS.gene92248:CDS |
ACCATAACTTGATCAAGAGG+CGG | 0.676966 | 2.1:+33062336 | None:intergenic |
ACAGAACCATTTGTCCAACA+AGG | 0.681679 | 2.1:-33075254 | MS.gene92248:CDS |
TCTGATGACATTCTCAACAA+CGG | 0.685910 | 2.1:-33074807 | MS.gene92248:CDS |
TGGTTCAAGAGTTGGCATGG+AGG | 0.690653 | 2.1:+33062366 | None:intergenic |
TCTCATTCATTGCAGCACTG+TGG | 0.693510 | 2.1:-33062768 | MS.gene92248:intron |
TATATACTTCAATCGACCAG+AGG | 0.714316 | 2.1:-33063188 | MS.gene92248:CDS |
TGCATGGTATGATGACGGGG+AGG | 0.715312 | 2.1:-33062458 | MS.gene92248:CDS |
TAAGCAATAGAAGAACAACC+AGG | 0.719081 | 2.1:+33075056 | None:intergenic |
TGATCATTAGCATGGCAAGG+AGG | 0.733253 | 2.1:+33070128 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 33062348 | 33075354 | 33062348 | ID=MS.gene92248 |
chr2.1 | mRNA | 33062348 | 33075354 | 33062348 | ID=MS.gene92248.t1;Parent=MS.gene92248 |
chr2.1 | exon | 33074973 | 33075354 | 33074973 | ID=MS.gene92248.t1.exon1;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33074973 | 33075354 | 33074973 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
chr2.1 | exon | 33074793 | 33074894 | 33074793 | ID=MS.gene92248.t1.exon2;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33074793 | 33074894 | 33074793 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
chr2.1 | exon | 33070649 | 33070741 | 33070649 | ID=MS.gene92248.t1.exon3;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33070649 | 33070741 | 33070649 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
chr2.1 | exon | 33070481 | 33070566 | 33070481 | ID=MS.gene92248.t1.exon4;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33070481 | 33070566 | 33070481 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
chr2.1 | exon | 33070109 | 33070360 | 33070109 | ID=MS.gene92248.t1.exon5;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33070109 | 33070360 | 33070109 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
chr2.1 | exon | 33063130 | 33063263 | 33063130 | ID=MS.gene92248.t1.exon6;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33063130 | 33063263 | 33063130 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
chr2.1 | exon | 33062680 | 33062775 | 33062680 | ID=MS.gene92248.t1.exon7;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33062680 | 33062775 | 33062680 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
chr2.1 | exon | 33062348 | 33062564 | 33062348 | ID=MS.gene92248.t1.exon8;Parent=MS.gene92248.t1 |
chr2.1 | CDS | 33062348 | 33062564 | 33062348 | ID=cds.MS.gene92248.t1;Parent=MS.gene92248.t1 |
Gene Sequence |
Protein sequence |