Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97140.t1 | KEH32916.1 | 98.7 | 379 | 5 | 0 | 1 | 379 | 1 | 379 | 3.10E-208 | 734.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97140.t1 | Q9M2V1 | 71.6 | 324 | 91 | 1 | 45 | 367 | 73 | 396 | 2.0e-126 | 453.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97140.t1 | A0A072UUA0 | 98.7 | 379 | 5 | 0 | 1 | 379 | 1 | 379 | 2.2e-208 | 734.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene97140 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene97140 | 0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene97140 | 0.807707 | 4.43E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene97140 | 0.810356 | 1.20E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene97140 | 0.828847 | 7.16E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene97140 | 0.815881 | 7.37E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene97140 | 0.817172 | 3.78E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene97140 | 0.811735 | 6.03E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene97140 | 0.815796 | 7.70E-52 | -1.69E-46 |
| MS.gene05081 | MS.gene97140 | 0.820033 | 8.49E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene97140 | 0.804064 | 2.58E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene97140 | 0.809725 | 1.64E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene97140 | 0.814892 | 1.22E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene97140 | 0.821973 | 3.04E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene97140 | 0.830368 | 3.06E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene97140 | 0.824009 | 1.02E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene97140 | 0.800428 | 1.45E-48 | -1.69E-46 |
| MS.gene052379 | MS.gene97140 | 0.804225 | 2.39E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene97140 | 0.828555 | 8.42E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene97140 | 0.819332 | 1.23E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene97140 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene97140 | 0.814095 | 1.83E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene97140 | 0.808408 | 3.14E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene97140 | 0.828283 | 9.80E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene97140 | 0.830743 | 2.47E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene97140 | 0.830793 | 2.40E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene97140 | 0.832538 | 8.93E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene97140 | 0.816195 | 6.27E-52 | -1.69E-46 |
| MS.gene053579 | MS.gene97140 | 0.81118 | 7.97E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene97140 | 0.823304 | 1.49E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene97140 | 0.807452 | 5.02E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene97140 | 0.806791 | 6.93E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene97140 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene97140 | 0.81023 | 1.28E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene97140 | 0.803972 | 2.70E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene97140 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene055941 | MS.gene97140 | 0.81853 | 1.87E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene97140 | 0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene97140 | 0.845625 | 3.61E-59 | -1.69E-46 |
| MS.gene056876 | MS.gene97140 | 0.818184 | 2.24E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene97140 | 0.822735 | 2.02E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene97140 | 0.820699 | 5.98E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene97140 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene97140 | 0.82385 | 1.11E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene97140 | 0.806302 | 8.79E-50 | -1.69E-46 |
| MS.gene057927 | MS.gene97140 | 0.822776 | 1.98E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene97140 | 0.825361 | 4.89E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene97140 | 0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene058376 | MS.gene97140 | 0.842497 | 2.49E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene97140 | 0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene97140 | 0.816798 | 4.59E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene97140 | 0.829288 | 5.60E-55 | -1.69E-46 |
| MS.gene059366 | MS.gene97140 | 0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene97140 | 0.82385 | 1.11E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene97140 | 0.805668 | 1.19E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene97140 | 0.812497 | 4.11E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene97140 | 0.836288 | 1.02E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene97140 | 0.814213 | 1.73E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene97140 | 0.81762 | 3.00E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene97140 | 0.802804 | 4.71E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene97140 | 0.852047 | 5.96E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97140.t1 | MTR_3g011510 | 98.681 | 379 | 5 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MS.gene97140.t1 | MTR_3g011510 | 98.634 | 366 | 5 | 0 | 14 | 379 | 1 | 366 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97140.t1 | AT3G54360 | 66.940 | 366 | 105 | 2 | 18 | 367 | 31 | 396 | 1.62e-175 | 494 |
| MS.gene97140.t1 | AT3G54360 | 66.940 | 366 | 105 | 2 | 18 | 367 | 31 | 396 | 1.62e-175 | 494 |
Find 83 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCATGTATATTGCGCTTTA+AGG | 0.157277 | 3.2:-5477556 | MS.gene97140:CDS |
| TTCAACTTGTTCTTGTTTAT+CGG | 0.174396 | 3.2:+5472432 | None:intergenic |
| AACATCACGGCGAACATTTA+AGG | 0.189458 | 3.2:+5475550 | None:intergenic |
| TCCGTTTCGCTTAATAAAAT+TGG | 0.209504 | 3.2:-5475629 | MS.gene97140:CDS |
| GTTCTTGTTTATCGGCCTTT+TGG | 0.296831 | 3.2:+5472440 | None:intergenic |
| TTTGGAAAGAGGTTCTTTCT+TGG | 0.311270 | 3.2:-5477364 | MS.gene97140:CDS |
| TGAAAATGTCTTGTCTTTGT+AGG | 0.334054 | 3.2:-5477957 | None:intergenic |
| GATTGGTCCTCTTAGTTGTA+TGG | 0.347050 | 3.2:-5477731 | MS.gene97140:CDS |
| TAGAGATTCCAGCAAGTCTA+TGG | 0.352338 | 3.2:+5472991 | None:intergenic |
| TAAGGTGAAGAAAGAGGTTA+AGG | 0.357284 | 3.2:-5477809 | MS.gene97140:CDS |
| TATATACGAGGATGTGTCTT+TGG | 0.357386 | 3.2:-5477382 | MS.gene97140:CDS |
| ACATAGGTTCAGTCTTGATT+TGG | 0.359386 | 3.2:+5476839 | None:intergenic |
| AGGTTCTTTCTTGGTGCAAC+AGG | 0.360238 | 3.2:-5477355 | MS.gene97140:CDS |
| TCAAGAAGCCATAGACTTGC+TGG | 0.365900 | 3.2:-5472999 | MS.gene97140:CDS |
| CAATTCAAATGTTTCATCTC+AGG | 0.394732 | 3.2:-5475519 | MS.gene97140:intron |
| AGAACAAGGCACACATTTGC+TGG | 0.397964 | 3.2:+5477684 | None:intergenic |
| TTCACAACTTGGAGCAGTCT+TGG | 0.399825 | 3.2:-5476763 | MS.gene97140:CDS |
| TGTCTCACCAAAGTGCCCTT+TGG | 0.400552 | 3.2:-5477776 | MS.gene97140:CDS |
| GTCTCACCAAAGTGCCCTTT+GGG | 0.401548 | 3.2:-5477775 | MS.gene97140:CDS |
| AAAGTTGCCAAAGGATGATA+TGG | 0.402202 | 3.2:-5475781 | MS.gene97140:CDS |
| GATTCACAAACATTTAAGAT+TGG | 0.409014 | 3.2:-5477748 | MS.gene97140:CDS |
| TTTAAGGACTGCCCGTTATG+TGG | 0.414325 | 3.2:-5477540 | MS.gene97140:CDS |
| GACACATCCTCGTATATAAC+AGG | 0.418665 | 3.2:+5477387 | None:intergenic |
| GGTGATCTTAAATATTATGA+TGG | 0.426058 | 3.2:-5475608 | MS.gene97140:CDS |
| TTAAGGACTGCCCGTTATGT+GGG | 0.437605 | 3.2:-5477539 | MS.gene97140:CDS |
| TGGGTATGCTTGGTGACTGC+TGG | 0.442245 | 3.2:-5476743 | MS.gene97140:intron |
| GAGCCCGATGCTGATCTTCA+AGG | 0.446498 | 3.2:-5477498 | MS.gene97140:CDS |
| CAATATCAGCCCCACATAAC+GGG | 0.455884 | 3.2:+5477529 | None:intergenic |
| ATAACCTCCATATCATCCTT+TGG | 0.459438 | 3.2:+5475774 | None:intergenic |
| TTAGAAGCATTACTGTCATC+CGG | 0.462561 | 3.2:+5477877 | None:intergenic |
| TCACAACTTGGAGCAGTCTT+GGG | 0.474641 | 3.2:-5476762 | MS.gene97140:CDS |
| GTAGTTGATCGCTTTATTGA+AGG | 0.475161 | 3.2:-5477474 | MS.gene97140:CDS |
| GTGATCTTAAATATTATGAT+GGG | 0.479498 | 3.2:-5475607 | MS.gene97140:CDS |
| AGTACGACCTTGCAGCTTGA+AGG | 0.480052 | 3.2:+5475582 | None:intergenic |
| AGCCAGTGGACTTGAGCAAC+GGG | 0.481590 | 3.2:-5472954 | MS.gene97140:intron |
| TCATCTAGAGCATGAAAGTA+AGG | 0.483268 | 3.2:-5477827 | MS.gene97140:CDS |
| TCTTGCAAAAGTAGCGGATG+TGG | 0.484863 | 3.2:-5473062 | MS.gene97140:CDS |
| TCATATCCCAAAGGGCACTT+TGG | 0.487972 | 3.2:+5477769 | None:intergenic |
| AGCATTACTGTCATCCGGAC+GGG | 0.488506 | 3.2:+5477882 | None:intergenic |
| GAGGATGTGTCTTTGGAAAG+AGG | 0.495437 | 3.2:-5477375 | MS.gene97140:CDS |
| GTCTTTGTAGGTTCTTGTTG+TGG | 0.496387 | 3.2:-5477945 | MS.gene97140:CDS |
| TACCCGTTGCTCAAGTCCAC+TGG | 0.497823 | 3.2:+5472952 | None:intergenic |
| AAGGTCATGCCAGGATCAAA+AGG | 0.498126 | 3.2:-5477455 | MS.gene97140:CDS |
| TCAGAGTTATGTTCACAACT+TGG | 0.500296 | 3.2:-5476774 | MS.gene97140:CDS |
| CAAGTTGAACAAACAATATG+AGG | 0.503148 | 3.2:-5472418 | None:intergenic |
| CATCCTTCTATAGCGGCTAT+CGG | 0.503220 | 3.2:-5472482 | MS.gene97140:intron |
| TCTTAGTTGTATGGTATGCC+AGG | 0.506853 | 3.2:-5477722 | MS.gene97140:CDS |
| GGAGCAGTCTTGGGTATGCT+TGG | 0.510369 | 3.2:-5476753 | MS.gene97140:CDS |
| TGAAAGTAAGGTGAAGAAAG+AGG | 0.514258 | 3.2:-5477815 | MS.gene97140:CDS |
| GCGGATGTGGACAAAAGTCT+AGG | 0.516734 | 3.2:-5473049 | MS.gene97140:CDS |
| AGACTTCCTTAGAAGCCAAA+AGG | 0.521354 | 3.2:-5472455 | MS.gene97140:CDS |
| TCAATATCAGCCCCACATAA+CGG | 0.522651 | 3.2:+5477528 | None:intergenic |
| CACTTTCTAAATTCTGAGCA+CGG | 0.525130 | 3.2:+5476862 | None:intergenic |
| CGGATGTGGACAAAAGTCTA+GGG | 0.527420 | 3.2:-5473048 | MS.gene97140:CDS |
| TTTGTGAATCATATCCCAAA+GGG | 0.546663 | 3.2:+5477761 | None:intergenic |
| ACACCTTGAAGATCAGCATC+GGG | 0.547362 | 3.2:+5477495 | None:intergenic |
| AACTGCTATCACCCATTGCT+CGG | 0.561570 | 3.2:+5475844 | None:intergenic |
| GATGAAAAGTCCGCTAGTGA+TGG | 0.561875 | 3.2:-5473025 | MS.gene97140:CDS |
| TGGCATACCATACAACTAAG+AGG | 0.568439 | 3.2:+5477724 | None:intergenic |
| AGGTCTGTTAATTTAGACAA+TGG | 0.578810 | 3.2:-5477435 | MS.gene97140:CDS |
| TACACCTTGAAGATCAGCAT+CGG | 0.579839 | 3.2:+5477494 | None:intergenic |
| CTTGGTGCAACAGGCCATGA+GGG | 0.579935 | 3.2:-5477346 | MS.gene97140:intron |
| ATTTCTGTCAAAGTTGCCAA+AGG | 0.579969 | 3.2:-5475790 | MS.gene97140:CDS |
| GCTTTATTGAAGGTCATGCC+AGG | 0.582251 | 3.2:-5477464 | MS.gene97140:CDS |
| AAGCCAGTGGACTTGAGCAA+CGG | 0.586144 | 3.2:-5472955 | MS.gene97140:CDS |
| GCATTACTGTCATCCGGACG+GGG | 0.603496 | 3.2:+5477883 | None:intergenic |
| GTTTGTGAATCATATCCCAA+AGG | 0.606562 | 3.2:+5477760 | None:intergenic |
| TAAGGACTGCCCGTTATGTG+GGG | 0.607937 | 3.2:-5477538 | MS.gene97140:CDS |
| TGGTGTCGAATAGAAGTGCC+TGG | 0.612439 | 3.2:+5477704 | None:intergenic |
| ATGGGGACCTTCAAGCTGCA+AGG | 0.614405 | 3.2:-5475589 | MS.gene97140:CDS |
| TGTTTCTCTTGCAAAAGTAG+CGG | 0.619467 | 3.2:-5473068 | MS.gene97140:CDS |
| TCTTGGTGCAACAGGCCATG+AGG | 0.620045 | 3.2:-5477347 | MS.gene97140:CDS |
| AAGCATTACTGTCATCCGGA+CGG | 0.622249 | 3.2:+5477881 | None:intergenic |
| AATTGTTCTTGACAACATCA+CGG | 0.633322 | 3.2:+5475537 | None:intergenic |
| TTGCAGAAAACATGAGAACA+AGG | 0.633881 | 3.2:+5477670 | None:intergenic |
| GTTGCCAAAGGATGATATGG+AGG | 0.634024 | 3.2:-5475778 | MS.gene97140:intron |
| TGATCTTAAATATTATGATG+GGG | 0.641979 | 3.2:-5475606 | MS.gene97140:CDS |
| TTCTTGAAATCCATCACTAG+CGG | 0.650386 | 3.2:+5473015 | None:intergenic |
| TTGAAAAGGACATACCCTCA+TGG | 0.661737 | 3.2:+5477332 | None:intergenic |
| TGCGAACGTCTTCTGCACAT+AGG | 0.663682 | 3.2:+5476823 | None:intergenic |
| GGATGTGGACAAAAGTCTAG+GGG | 0.700647 | 3.2:-5473047 | MS.gene97140:CDS |
| TAATAAGCCTGTTATATACG+AGG | 0.704805 | 3.2:-5477394 | MS.gene97140:CDS |
| ACATTGAAATCTGAAGCCAG+TGG | 0.727372 | 3.2:-5472968 | MS.gene97140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATTAATTAATAAA+AGG | + | chr3.2:5476692-5476711 | None:intergenic | 0.0% |
| !! | TATATATATATATATATAAA+TGG | + | chr3.2:5474240-5474221 | None:intergenic | 0.0% |
| !! | ATTTATCTATCATATAATAT+AGG | + | chr3.2:5476985-5477004 | None:intergenic | 10.0% |
| !! | TTTACATTATATACTAAAAA+TGG | + | chr3.2:5477794-5477813 | None:intergenic | 10.0% |
| !! | AAATAACATCAAGAAATATT+TGG | + | chr3.2:5475264-5475283 | None:intergenic | 15.0% |
| !! | AAATTAAATTTGTGAAAGAA+TGG | - | chr3.2:5473090-5473109 | MS.gene97140:intron | 15.0% |
| !! | AATAAAAAATTAAAGCAAAG+CGG | + | chr3.2:5474930-5474949 | None:intergenic | 15.0% |
| !! | AATTAATGACAAAAATTTCA+AGG | + | chr3.2:5473121-5473140 | None:intergenic | 15.0% |
| !! | AGATATAATTCAAATATAAG+TGG | + | chr3.2:5474893-5474912 | None:intergenic | 15.0% |
| !! | CTTTGTAAAATATTTGATAT+TGG | - | chr3.2:5475987-5476006 | MS.gene97140:intron | 15.0% |
| !! | TTATTTCATGTTTAATACTT+CGG | - | chr3.2:5473213-5473232 | MS.gene97140:intron | 15.0% |
| !! | TTCATTGTTTATATCAATTT+AGG | - | chr3.2:5477268-5477287 | MS.gene97140:intron | 15.0% |
| !! | TTGATATAAACAATGAAAAA+AGG | + | chr3.2:5477265-5477284 | None:intergenic | 15.0% |
| !! | TTTGGTCATAAATATATTAT+AGG | - | chr3.2:5475879-5475898 | MS.gene97140:intron | 15.0% |
| !!! | AAGCAATTTTTATTTTGAAA+CGG | + | chr3.2:5475437-5475456 | None:intergenic | 15.0% |
| !!! | ATATGTTTTTATCATTTTCA+TGG | + | chr3.2:5475533-5475552 | None:intergenic | 15.0% |
| !! | AAATAAAAATTGCTTTGACA+AGG | - | chr3.2:5475442-5475461 | MS.gene97140:intron | 20.0% |
| !! | ATAAAAAATTAAAGCAAAGC+GGG | + | chr3.2:5474929-5474948 | None:intergenic | 20.0% |
| !! | ATAGACTAATATATAAAGAC+AGG | - | chr3.2:5473792-5473811 | MS.gene97140:intron | 20.0% |
| !! | CAAAAACATTATATGCAATA+TGG | + | chr3.2:5472761-5472780 | None:intergenic | 20.0% |
| !! | CTAAAGCAAAAAATTTAATG+TGG | + | chr3.2:5477137-5477156 | None:intergenic | 20.0% |
| !! | CTTTGTAAAAAATTTGGTAT+TGG | + | chr3.2:5476877-5476896 | None:intergenic | 20.0% |
| !! | GTGATCTTAAATATTATGAT+GGG | - | chr3.2:5474765-5474784 | MS.gene97140:intron | 20.0% |
| !! | TAGACTAATATATAAAGACA+GGG | - | chr3.2:5473793-5473812 | MS.gene97140:intron | 20.0% |
| !! | TATAATAGAAAGAGAAAAGA+AGG | - | chr3.2:5475550-5475569 | MS.gene97140:CDS | 20.0% |
| !! | TGATCTTAAATATTATGATG+GGG | - | chr3.2:5474766-5474785 | MS.gene97140:intron | 20.0% |
| !! | TTGAATTATATCTAATCGTA+CGG | - | chr3.2:5474900-5474919 | MS.gene97140:intron | 20.0% |
| !! | TTGTGAAACAATAAGAAATA+TGG | + | chr3.2:5474432-5474451 | None:intergenic | 20.0% |
| !!! | AAATTTTGGGAGAAAAAAAA+AGG | - | chr3.2:5475841-5475860 | MS.gene97140:CDS | 20.0% |
| !!! | AATAAACTGAAAACATCTTT+TGG | + | chr3.2:5475028-5475047 | None:intergenic | 20.0% |
| !!! | AGATATACAGTTTTCATTTT+AGG | - | chr3.2:5477827-5477846 | MS.gene97140:CDS | 20.0% |
| !!! | CACATTAAATTTTTTGCTTT+AGG | - | chr3.2:5477135-5477154 | MS.gene97140:intron | 20.0% |
| !!! | TGACCAAATTAATTTTTTAG+AGG | + | chr3.2:5475867-5475886 | None:intergenic | 20.0% |
| !!! | TTAATTAGTTTATCGAAACA+GGG | - | chr3.2:5475198-5475217 | MS.gene97140:intron | 20.0% |
| !!! | TTTAATTAGTTTATCGAAAC+AGG | - | chr3.2:5475197-5475216 | MS.gene97140:intron | 20.0% |
| ! | AAAAAGATCTCAATTACTCT+TGG | - | chr3.2:5477036-5477055 | MS.gene97140:intron | 25.0% |
| ! | AAAAGTTGTTTATCCAAAAC+AGG | + | chr3.2:5473240-5473259 | None:intergenic | 25.0% |
| ! | AAACTAGCAAAAACTAATTC+TGG | + | chr3.2:5474267-5474286 | None:intergenic | 25.0% |
| ! | AAAGTTGTTTATCCAAAACA+GGG | + | chr3.2:5473239-5473258 | None:intergenic | 25.0% |
| ! | AAGCTAAAATTCACATACTA+AGG | + | chr3.2:5475224-5475243 | None:intergenic | 25.0% |
| ! | ACGTTGTAACATAACAAAAT+TGG | - | chr3.2:5473943-5473962 | MS.gene97140:intron | 25.0% |
| ! | AGCAAGATAAATTGTACTTA+TGG | + | chr3.2:5475746-5475765 | None:intergenic | 25.0% |
| ! | AGTTTAATGTCATGTTTAAG+AGG | - | chr3.2:5474467-5474486 | MS.gene97140:intron | 25.0% |
| ! | CAAGAAAGATAAAAACAAAG+AGG | - | chr3.2:5474042-5474061 | MS.gene97140:intron | 25.0% |
| ! | GATGATATAACTTGATTCAA+TGG | - | chr3.2:5477544-5477563 | MS.gene97140:CDS | 25.0% |
| ! | GGTAAAATGTTATTATCAAG+TGG | + | chr3.2:5473466-5473485 | None:intergenic | 25.0% |
| ! | GGTGATCTTAAATATTATGA+TGG | - | chr3.2:5474764-5474783 | MS.gene97140:intron | 25.0% |
| ! | TAACCTATAAGTTGTTTATC+TGG | - | chr3.2:5473358-5473377 | MS.gene97140:intron | 25.0% |
| ! | TATAACTTGATTCAATGGTT+AGG | - | chr3.2:5477549-5477568 | MS.gene97140:CDS | 25.0% |
| ! | TATAGGCTTAAATGTGTATT+TGG | - | chr3.2:5475896-5475915 | MS.gene97140:intron | 25.0% |
| ! | TATCCAGATAAACAACTTAT+AGG | + | chr3.2:5473364-5473383 | None:intergenic | 25.0% |
| ! | TATGACTTATGATTCATTCA+TGG | - | chr3.2:5474330-5474349 | MS.gene97140:intron | 25.0% |
| ! | TCAGATATTGTTTAGACATA+TGG | - | chr3.2:5473684-5473703 | MS.gene97140:intron | 25.0% |
| ! | TGTTGAATTCAAATCATCTT+TGG | - | chr3.2:5474105-5474124 | MS.gene97140:intron | 25.0% |
| !! | AATGTTTAGAATAGAATCAG+TGG | - | chr3.2:5474065-5474084 | MS.gene97140:intron | 25.0% |
| !! | ACCAATTTTATTAAGCGAAA+CGG | + | chr3.2:5474747-5474766 | None:intergenic | 25.0% |
| !! | AGGCCTCTAAAAAATTAATT+TGG | - | chr3.2:5475861-5475880 | MS.gene97140:intron | 25.0% |
| !! | CTAAGATTAGTGTATCTTTT+AGG | - | chr3.2:5473740-5473759 | MS.gene97140:intron | 25.0% |
| !! | GATTCACAAACATTTAAGAT+TGG | - | chr3.2:5472624-5472643 | MS.gene97140:intron | 25.0% |
| !! | TAGATTCATTTCTAGACATA+TGG | - | chr3.2:5475301-5475320 | MS.gene97140:intron | 25.0% |
| !! | TTCAACTTGTTCTTGTTTAT+CGG | + | chr3.2:5477943-5477962 | None:intergenic | 25.0% |
| !! | TTGGTCATGAATTCAAATTT+TGG | - | chr3.2:5477055-5477074 | MS.gene97140:intron | 25.0% |
| !!! | ACCATTTGTAATTCTAAAAC+AGG | - | chr3.2:5473483-5473502 | MS.gene97140:intron | 25.0% |
| !!! | ATTTTAACAAAAGGACATAC+TGG | + | chr3.2:5472468-5472487 | None:intergenic | 25.0% |
| !!! | CTACAGCTTTTTATTTTACT+AGG | - | chr3.2:5473419-5473438 | MS.gene97140:intron | 25.0% |
| !!! | CTCTTTGTTTTTATCTTTCT+TGG | + | chr3.2:5474044-5474063 | None:intergenic | 25.0% |
| !!! | TTACACTAAATAAAGTATCG+TGG | + | chr3.2:5473889-5473908 | None:intergenic | 25.0% |
| !!! | TTTTTTCTCCCAAAATTTTG+AGG | + | chr3.2:5475839-5475858 | None:intergenic | 25.0% |
| AAAAATTGCTTTGACAAGGT+TGG | - | chr3.2:5475446-5475465 | MS.gene97140:intron | 30.0% | |
| AAAATTGCTTTGACAAGGTT+GGG | - | chr3.2:5475447-5475466 | MS.gene97140:intron | 30.0% | |
| AACATTAACCTTGTTCTTCT+TGG | + | chr3.2:5476594-5476613 | None:intergenic | 30.0% | |
| AACCAAACAAAAAAAACTGC+AGG | - | chr3.2:5476909-5476928 | MS.gene97140:intron | 30.0% | |
| AACCAAACAAAAAAAACTGC+AGG | + | chr3.2:5476928-5476909 | None:intergenic | 30.0% | |
| AAGAACCTTCACATTTGAAA+AGG | + | chr3.2:5473057-5473076 | None:intergenic | 30.0% | |
| AATTGTTCTTGACAACATCA+CGG | + | chr3.2:5474838-5474857 | None:intergenic | 30.0% | |
| ACCAAACAAAAAAAACTGCA+GGG | - | chr3.2:5476910-5476929 | MS.gene97140:intron | 30.0% | |
| ACCAAACAAAAAAAACTGCA+GGG | + | chr3.2:5476929-5476910 | None:intergenic | 30.0% | |
| AGCATAATACTAACAAGGTT+GGG | - | chr3.2:5475407-5475426 | MS.gene97140:intron | 30.0% | |
| AGGTCTGTTAATTTAGACAA+TGG | - | chr3.2:5472937-5472956 | MS.gene97140:intron | 30.0% | |
| ATGAATCTAACTAACGTGAT+TGG | + | chr3.2:5475290-5475309 | None:intergenic | 30.0% | |
| ATTATCATCCACAATGAAAG+TGG | - | chr3.2:5473141-5473160 | MS.gene97140:intron | 30.0% | |
| CAATTCAAATGTTTCATCTC+AGG | - | chr3.2:5474853-5474872 | MS.gene97140:intron | 30.0% | |
| CCTAGATTCAATTAACCTAA+GGG | + | chr3.2:5475776-5475795 | None:intergenic | 30.0% | |
| CCTTAGGTTAATTGAATCTA+GGG | - | chr3.2:5475774-5475793 | MS.gene97140:intron | 30.0% | |
| CTAGATTCAATTAACCTAAG+GGG | + | chr3.2:5475775-5475794 | None:intergenic | 30.0% | |
| CTATAAGTGCTTATCATCTA+AGG | - | chr3.2:5473274-5473293 | MS.gene97140:intron | 30.0% | |
| CTCGCACTTTGTAAAAAATT+TGG | + | chr3.2:5476883-5476902 | None:intergenic | 30.0% | |
| CTTGATAAGATAGAAAAGCT+TGG | + | chr3.2:5476229-5476248 | None:intergenic | 30.0% | |
| GAACAAGGTTAATGTTAATC+TGG | - | chr3.2:5476598-5476617 | MS.gene97140:intron | 30.0% | |
| GAACATAGCTTATAGCTTAT+AGG | - | chr3.2:5475074-5475093 | MS.gene97140:intron | 30.0% | |
| GTAGATATACAATTCTACCA+TGG | - | chr3.2:5477732-5477751 | MS.gene97140:CDS | 30.0% | |
| GTGTGAAGTTATTACTTACT+TGG | - | chr3.2:5477632-5477651 | MS.gene97140:intron | 30.0% | |
| TAATAAGCCTGTTATATACG+AGG | - | chr3.2:5472978-5472997 | MS.gene97140:CDS | 30.0% | |
| TATAGGCTTAATTGTGTGTT+TGG | + | chr3.2:5476968-5476987 | None:intergenic | 30.0% | |
| TCAAATCATCTTTGGTATTG+AGG | - | chr3.2:5474113-5474132 | MS.gene97140:intron | 30.0% | |
| TCCGTTTCGCTTAATAAAAT+TGG | - | chr3.2:5474743-5474762 | MS.gene97140:intron | 30.0% | |
| TTTAACATCTCATTGACAGA+AGG | - | chr3.2:5476850-5476869 | MS.gene97140:CDS | 30.0% | |
| TTTAACATCTCATTGACAGA+AGG | + | chr3.2:5476869-5476850 | None:intergenic | 30.0% | |
| TTTCTATCTTATCAAGCACT+TGG | - | chr3.2:5476233-5476252 | MS.gene97140:intron | 30.0% | |
| TTTGTGAATCATATCCCAAA+GGG | + | chr3.2:5472614-5472633 | None:intergenic | 30.0% | |
| ! | ATGTTTTCTGCAAGTATGTA+TGG | - | chr3.2:5472712-5472731 | MS.gene97140:intron | 30.0% |
| ! | ATTCATTTCTAGACATATGG+AGG | - | chr3.2:5475304-5475323 | MS.gene97140:intron | 30.0% |
| ! | CAAATATTTTACAAAGTGCG+AGG | + | chr3.2:5475983-5476002 | None:intergenic | 30.0% |
| ! | CAAATCATCTTTGGTATTGA+GGG | - | chr3.2:5474114-5474133 | MS.gene97140:intron | 30.0% |
| ! | TATGTCCTTTTCAAATGTGA+AGG | - | chr3.2:5473049-5473068 | MS.gene97140:CDS | 30.0% |
| ! | TTCATTTCTAGACATATGGA+GGG | - | chr3.2:5475305-5475324 | MS.gene97140:intron | 30.0% |
| !! | TTTAGGCCTCTTAATTTGTA+GGG | - | chr3.2:5477152-5477171 | MS.gene97140:intron | 30.0% |
| !!! | CAAATTTTTTACAAAGTGCG+AGG | - | chr3.2:5476881-5476900 | MS.gene97140:intron | 30.0% |
| !!! | GCCTGTTTTAGAATTACAAA+TGG | + | chr3.2:5473487-5473506 | None:intergenic | 30.0% |
| AAAGTGTGTGTGTAATCTGT+AGG | + | chr3.2:5474724-5474743 | None:intergenic | 35.0% | |
| AAAGTTGCCAAAGGATGATA+TGG | - | chr3.2:5474591-5474610 | MS.gene97140:intron | 35.0% | |
| AACGTCAAAGTTACTAACAG+CGG | - | chr3.2:5476446-5476465 | MS.gene97140:intron | 35.0% | |
| AAGGTTAATGTTAATCTGGC+CGG | - | chr3.2:5476602-5476621 | MS.gene97140:intron | 35.0% | |
| ACACGTTAGAACATGTCATT+TGG | - | chr3.2:5477210-5477229 | MS.gene97140:intron | 35.0% | |
| ACATAGGTTCAGTCTTGATT+TGG | + | chr3.2:5473536-5473555 | None:intergenic | 35.0% | |
| ACTAATTCTGGACACCATAA+AGG | + | chr3.2:5474255-5474274 | None:intergenic | 35.0% | |
| AGAATAGAATCAGTGGAGAT+TGG | - | chr3.2:5474072-5474091 | MS.gene97140:intron | 35.0% | |
| AGTTAAGAAGCAGACTGATA+AGG | - | chr3.2:5475359-5475378 | MS.gene97140:intron | 35.0% | |
| ATAACCTCCATATCATCCTT+TGG | + | chr3.2:5474601-5474620 | None:intergenic | 35.0% | |
| ATAGAAAGAGAAAAGAAGGC+AGG | - | chr3.2:5475554-5475573 | MS.gene97140:CDS | 35.0% | |
| ATGGATTCGAGAAATAAGCA+TGG | + | chr3.2:5472742-5472761 | None:intergenic | 35.0% | |
| ATGGGTGGTTAAAGATTCAA+AGG | + | chr3.2:5477182-5477201 | None:intergenic | 35.0% | |
| ATTTCTGTCAAAGTTGCCAA+AGG | - | chr3.2:5474582-5474601 | MS.gene97140:intron | 35.0% | |
| ATTTGAAGAAGAGAAACGCA+AGG | + | chr3.2:5476661-5476680 | None:intergenic | 35.0% | |
| CAATTTCCATCCTTCTATAG+CGG | - | chr3.2:5477883-5477902 | MS.gene97140:CDS | 35.0% | |
| CACTTTCTAAATTCTGAGCA+CGG | + | chr3.2:5473513-5473532 | None:intergenic | 35.0% | |
| CAGCATAATACTAACAAGGT+TGG | - | chr3.2:5475406-5475425 | MS.gene97140:intron | 35.0% | |
| CATAATCACCACTTTCATTG+TGG | + | chr3.2:5473152-5473171 | None:intergenic | 35.0% | |
| CCCTAGATTCAATTAACCTA+AGG | + | chr3.2:5475777-5475796 | None:intergenic | 35.0% | |
| CCCTTAGGTTAATTGAATCT+AGG | - | chr3.2:5475773-5475792 | MS.gene97140:intron | 35.0% | |
| CTGTCAAATAGCAGTTATAG+TGG | - | chr3.2:5473913-5473932 | MS.gene97140:intron | 35.0% | |
| GAAAACATGGTCGAAAATAG+TGG | - | chr3.2:5473818-5473837 | MS.gene97140:intron | 35.0% | |
| GACTCAGCATAATACTAACA+AGG | - | chr3.2:5475402-5475421 | MS.gene97140:intron | 35.0% | |
| GCATAATACTAACAAGGTTG+GGG | - | chr3.2:5475408-5475427 | MS.gene97140:intron | 35.0% | |
| GGTTCAAGATGAATGAATCA+GGG | + | chr3.2:5474411-5474430 | None:intergenic | 35.0% | |
| GTTAGTAAAACTGAAGTCCA+TGG | + | chr3.2:5477752-5477771 | None:intergenic | 35.0% | |
| GTTAGTATTATGCTGAGTCT+GGG | + | chr3.2:5475401-5475420 | None:intergenic | 35.0% | |
| GTTTGTGAATCATATCCCAA+AGG | + | chr3.2:5472615-5472634 | None:intergenic | 35.0% | |
| TAAGGTGAAGAAAGAGGTTA+AGG | - | chr3.2:5472563-5472582 | MS.gene97140:intron | 35.0% | |
| TATATACGAGGATGTGTCTT+TGG | - | chr3.2:5472990-5473009 | MS.gene97140:CDS | 35.0% | |
| TCAAATGTTTCATCTCAGGT+TGG | - | chr3.2:5474857-5474876 | MS.gene97140:intron | 35.0% | |
| TCACGTGGCATTAAATGATT+GGG | + | chr3.2:5476070-5476089 | None:intergenic | 35.0% | |
| TCAGAGTTATGTTCACAACT+TGG | - | chr3.2:5473598-5473617 | MS.gene97140:intron | 35.0% | |
| TCTAACGTGTAAATGTGCAT+GGG | + | chr3.2:5477200-5477219 | None:intergenic | 35.0% | |
| TCTGGATATGACATTGTTGA+TGG | - | chr3.2:5473376-5473395 | MS.gene97140:intron | 35.0% | |
| TGAAAGTAAGGTGAAGAAAG+AGG | - | chr3.2:5472557-5472576 | MS.gene97140:intron | 35.0% | |
| TGGATTCGAGAAATAAGCAT+GGG | + | chr3.2:5472741-5472760 | None:intergenic | 35.0% | |
| TGGTTCAAGATGAATGAATC+AGG | + | chr3.2:5474412-5474431 | None:intergenic | 35.0% | |
| TGTTAGTATTATGCTGAGTC+TGG | + | chr3.2:5475402-5475421 | None:intergenic | 35.0% | |
| TGTTTCTCTTGCAAAAGTAG+CGG | - | chr3.2:5477304-5477323 | MS.gene97140:intron | 35.0% | |
| TTACAAGAACTCACGTAATG+AGG | + | chr3.2:5475674-5475693 | None:intergenic | 35.0% | |
| TTAGTATTATGCTGAGTCTG+GGG | + | chr3.2:5475400-5475419 | None:intergenic | 35.0% | |
| TTCTAACGTGTAAATGTGCA+TGG | + | chr3.2:5477201-5477220 | None:intergenic | 35.0% | |
| TTCTTGAAATCCATCACTAG+CGG | + | chr3.2:5477360-5477379 | None:intergenic | 35.0% | |
| TTGCAGAAAACATGAGAACA+AGG | + | chr3.2:5472705-5472724 | None:intergenic | 35.0% | |
| TTTGGAAAGAGGTTCTTTCT+TGG | - | chr3.2:5473008-5473027 | MS.gene97140:CDS | 35.0% | |
| ! | ACTTTTGATACATTCTGAGC+TGG | - | chr3.2:5473184-5473203 | MS.gene97140:intron | 35.0% |
| ! | ATAACTTTTCCACTGATCAG+AGG | - | chr3.2:5475636-5475655 | MS.gene97140:CDS | 35.0% |
| ! | ATTAACAGACCTTTTGATCC+TGG | + | chr3.2:5472929-5472948 | None:intergenic | 35.0% |
| ! | CAAAAACAGGTAAAAGTGCA+GGG | - | chr3.2:5476941-5476960 | MS.gene97140:intron | 35.0% |
| ! | CAAAAACTGGTAAAAGTGCA+GGG | + | chr3.2:5475923-5475942 | None:intergenic | 35.0% |
| ! | CTTACGAGTTTCATTGATTG+CGG | - | chr3.2:5473764-5473783 | MS.gene97140:intron | 35.0% |
| ! | GGTTTTCAGATGAGGATTTA+CGG | + | chr3.2:5476277-5476296 | None:intergenic | 35.0% |
| ! | GTAGTTGATCGCTTTATTGA+AGG | - | chr3.2:5472898-5472917 | MS.gene97140:intron | 35.0% |
| ! | TCATCTAGAGCATGAAAGTA+AGG | - | chr3.2:5472545-5472564 | MS.gene97140:intron | 35.0% |
| ! | TCATTTCTAGACATATGGAG+GGG | - | chr3.2:5475306-5475325 | MS.gene97140:intron | 35.0% |
| ! | TTTCCTATTGCTCAAGCTTT+TGG | - | chr3.2:5476383-5476402 | MS.gene97140:intron | 35.0% |
| ! | TTTTCTGCAAGTATGTATGG+TGG | - | chr3.2:5472715-5472734 | MS.gene97140:intron | 35.0% |
| ! | TTTTGTTAAAATTCCCCGTC+CGG | - | chr3.2:5472476-5472495 | MS.gene97140:intron | 35.0% |
| !! | AACATAGACGGTGTTGTTAA+TGG | + | chr3.2:5476309-5476328 | None:intergenic | 35.0% |
| !! | CATTAGAACCTTGCTTTTCT+TGG | - | chr3.2:5474623-5474642 | MS.gene97140:intron | 35.0% |
| !! | CTTTAGGCCTCTTAATTTGT+AGG | - | chr3.2:5477151-5477170 | MS.gene97140:intron | 35.0% |
| !! | GCTTTAGGCCTCAAAATTTT+GGG | - | chr3.2:5475828-5475847 | MS.gene97140:CDS | 35.0% |
| !! | TTAGAAGCATTACTGTCATC+CGG | + | chr3.2:5472498-5472517 | None:intergenic | 35.0% |
| !!! | CTTTTACCAGTTTTTGGCAT+TGG | - | chr3.2:5475927-5475946 | MS.gene97140:intron | 35.0% |
| !!! | CTTTTACCTGTTTTTGGCAT+TGG | + | chr3.2:5476937-5476956 | None:intergenic | 35.0% |
| !!! | GTATTGAGGGTGTTTAGTTT+TGG | - | chr3.2:5474127-5474146 | MS.gene97140:intron | 35.0% |
| !!! | TCCCTGCAGTTTTTTTTGTT+TGG | - | chr3.2:5475950-5475969 | MS.gene97140:intron | 35.0% |
| !!! | TCCCTGCAGTTTTTTTTGTT+TGG | + | chr3.2:5475969-5475950 | None:intergenic | 35.0% |
| !!! | TTGTTTTTTAGTGTGTCACG+TGG | + | chr3.2:5476085-5476104 | None:intergenic | 35.0% |
| AAAAGCAGTAGTCGCCTTTA+TGG | - | chr3.2:5474238-5474257 | MS.gene97140:intron | 40.0% | |
| AACATCACGGCGAACATTTA+AGG | + | chr3.2:5474825-5474844 | None:intergenic | 40.0% | |
| AGACTTCCTTAGAAGCCAAA+AGG | - | chr3.2:5477917-5477936 | MS.gene97140:CDS | 40.0% | |
| AGGAAAACTCTTGTGACAGT+TGG | + | chr3.2:5476369-5476388 | None:intergenic | 40.0% | |
| AGTTATGTTAGTGCGCAAAC+AGG | + | chr3.2:5475622-5475641 | None:intergenic | 40.0% | |
| ATATGGAGGGGATAGAATGA+TGG | - | chr3.2:5475318-5475337 | MS.gene97140:intron | 40.0% | |
| ATCTTGCTCTTTAACCCCTT+AGG | - | chr3.2:5475758-5475777 | MS.gene97140:intron | 40.0% | |
| ATGAATCAGGGAAGAGCAAA+AGG | + | chr3.2:5474399-5474418 | None:intergenic | 40.0% | |
| ATGCCATACTGGATAGCTAA+CGG | + | chr3.2:5475052-5475071 | None:intergenic | 40.0% | |
| CGCAGTCAGATAGAAAAAGT+CGG | - | chr3.2:5473568-5473587 | MS.gene97140:intron | 40.0% | |
| CTATCTTATCAAGCACTTGG+TGG | - | chr3.2:5476236-5476255 | MS.gene97140:intron | 40.0% | |
| CTCACGTAATGAGGAAACTA+CGG | + | chr3.2:5475665-5475684 | None:intergenic | 40.0% | |
| GACACATCCTCGTATATAAC+AGG | + | chr3.2:5472988-5473007 | None:intergenic | 40.0% | |
| GCTATGTTCATATGCCATAC+TGG | + | chr3.2:5475063-5475082 | None:intergenic | 40.0% | |
| GGCATGTATATTGCGCTTTA+AGG | - | chr3.2:5472816-5472835 | MS.gene97140:intron | 40.0% | |
| GGTTGCGATGAAAACATAGA+CGG | + | chr3.2:5476321-5476340 | None:intergenic | 40.0% | |
| GTCACGTGGCATTAAATGAT+TGG | + | chr3.2:5476071-5476090 | None:intergenic | 40.0% | |
| GTCTTTGTAGGTTCTTGTTG+TGG | - | chr3.2:5472427-5472446 | MS.gene97140:CDS | 40.0% | |
| GTGGTTAAAGATTCAAAGGC+CGG | + | chr3.2:5477178-5477197 | None:intergenic | 40.0% | |
| TAAAGACAGGGTCGAAAACA+TGG | - | chr3.2:5473805-5473824 | MS.gene97140:intron | 40.0% | |
| TAAGAAGCAGACTGATAAGG+AGG | - | chr3.2:5475362-5475381 | MS.gene97140:intron | 40.0% | |
| TAATACTAACAAGGTTGGGG+TGG | - | chr3.2:5475411-5475430 | MS.gene97140:intron | 40.0% | |
| TAATGTTAATCTGGCCGGAA+TGG | - | chr3.2:5476607-5476626 | MS.gene97140:intron | 40.0% | |
| TACACCTTGAAGATCAGCAT+CGG | + | chr3.2:5472881-5472900 | None:intergenic | 40.0% | |
| TAGAGATTCCAGCAAGTCTA+TGG | + | chr3.2:5477384-5477403 | None:intergenic | 40.0% | |
| TCAATATCAGCCCCACATAA+CGG | + | chr3.2:5472847-5472866 | None:intergenic | 40.0% | |
| TCACGTAATGAGGAAACTAC+GGG | + | chr3.2:5475664-5475683 | None:intergenic | 40.0% | |
| TCTTAGTTGTATGGTATGCC+AGG | - | chr3.2:5472650-5472669 | MS.gene97140:intron | 40.0% | |
| TGGAGATTCCAAGAAGAACA+AGG | - | chr3.2:5476583-5476602 | MS.gene97140:intron | 40.0% | |
| TGGCATACCATACAACTAAG+AGG | + | chr3.2:5472651-5472670 | None:intergenic | 40.0% | |
| TGTGCCTCTCACTAAATTCT+GGG | - | chr3.2:5476541-5476560 | MS.gene97140:intron | 40.0% | |
| TTATGTCTGTCTCTTGTGCA+GGG | - | chr3.2:5472795-5472814 | MS.gene97140:intron | 40.0% | |
| TTGAAAAGGACATACCCTCA+TGG | + | chr3.2:5473043-5473062 | None:intergenic | 40.0% | |
| TTTATGTCTGTCTCTTGTGC+AGG | - | chr3.2:5472794-5472813 | MS.gene97140:intron | 40.0% | |
| TTTCAGATGAGGATTTACGG+TGG | + | chr3.2:5476274-5476293 | None:intergenic | 40.0% | |
| TTTCCGTTAGCTATCCAGTA+TGG | - | chr3.2:5475046-5475065 | MS.gene97140:intron | 40.0% | |
| ! | ACATTGAAATCTGAAGCCAG+TGG | - | chr3.2:5477404-5477423 | MS.gene97140:CDS | 40.0% |
| ! | AGGTTAATTGAATCTAGGGC+CGG | - | chr3.2:5475778-5475797 | MS.gene97140:intron | 40.0% |
| ! | CCAAAAACAGGTAAAAGTGC+AGG | - | chr3.2:5476940-5476959 | MS.gene97140:intron | 40.0% |
| ! | CCAAAAACTGGTAAAAGTGC+AGG | + | chr3.2:5475924-5475943 | None:intergenic | 40.0% |
| ! | CCTGCACTTTTACCAGTTTT+TGG | - | chr3.2:5475921-5475940 | MS.gene97140:intron | 40.0% |
| ! | CCTGCACTTTTACCTGTTTT+TGG | + | chr3.2:5476943-5476962 | None:intergenic | 40.0% |
| ! | GAACATGTCATTTGGACAGA+AGG | - | chr3.2:5477218-5477237 | MS.gene97140:intron | 40.0% |
| ! | GATTGGTCCTCTTAGTTGTA+TGG | - | chr3.2:5472641-5472660 | MS.gene97140:intron | 40.0% |
| ! | GTAAGTTGAGGTAAAAGCCA+CGG | + | chr3.2:5476520-5476539 | None:intergenic | 40.0% |
| ! | TTAATACTTCGGCCCTGTTT+TGG | - | chr3.2:5473224-5473243 | MS.gene97140:intron | 40.0% |
| !! | AAGCTTTTGGTGGACACAAA+CGG | - | chr3.2:5476396-5476415 | MS.gene97140:intron | 40.0% |
| !! | ATAGACGGTGTTGTTAATGG+TGG | + | chr3.2:5476306-5476325 | None:intergenic | 40.0% |
| !! | GGACGGGGAATTTTAACAAA+AGG | + | chr3.2:5472477-5472496 | None:intergenic | 40.0% |
| !! | GTTCTTGTTTATCGGCCTTT+TGG | + | chr3.2:5477935-5477954 | None:intergenic | 40.0% |
| !! | TGTTGTTAATGGTGGTGGAT+TGG | + | chr3.2:5476298-5476317 | None:intergenic | 40.0% |
| !!! | GGCTTTAGGCCTCAAAATTT+TGG | - | chr3.2:5475827-5475846 | MS.gene97140:CDS | 40.0% |
| !!! | TTGTTTTTTAGTGTGCCACG+TGG | - | chr3.2:5476778-5476797 | MS.gene97140:CDS | 40.0% |
| AACGTGTAAATGTGCATGGG+TGG | + | chr3.2:5477197-5477216 | None:intergenic | 45.0% | |
| AACTGCTATCACCCATTGCT+CGG | + | chr3.2:5474531-5474550 | None:intergenic | 45.0% | |
| AAGCATTACTGTCATCCGGA+CGG | + | chr3.2:5472494-5472513 | None:intergenic | 45.0% | |
| AAGGTCATGCCAGGATCAAA+AGG | - | chr3.2:5472917-5472936 | MS.gene97140:intron | 45.0% | |
| ACACCTTGAAGATCAGCATC+GGG | + | chr3.2:5472880-5472899 | None:intergenic | 45.0% | |
| AGAACAAGGCACACATTTGC+TGG | + | chr3.2:5472691-5472710 | None:intergenic | 45.0% | |
| CAATATCAGCCCCACATAAC+GGG | + | chr3.2:5472846-5472865 | None:intergenic | 45.0% | |
| CACTAGAGCCAAGAAAAGCA+AGG | + | chr3.2:5474634-5474653 | None:intergenic | 45.0% | |
| CATCCTTCTATAGCGGCTAT+CGG | - | chr3.2:5477890-5477909 | MS.gene97140:CDS | 45.0% | |
| CATTAAATGATTGGGCCACG+TGG | + | chr3.2:5476062-5476081 | None:intergenic | 45.0% | |
| CCACCAAAAGCTTGAGCAAT+AGG | + | chr3.2:5476389-5476408 | None:intergenic | 45.0% | |
| CGGATGTGGACAAAAGTCTA+GGG | - | chr3.2:5477324-5477343 | MS.gene97140:intron | 45.0% | |
| CTGTAGCTTCAGCAGATCAA+GGG | + | chr3.2:5473405-5473424 | None:intergenic | 45.0% | |
| CTGTGCCTCTCACTAAATTC+TGG | - | chr3.2:5476540-5476559 | MS.gene97140:intron | 45.0% | |
| GATGAAAAGTCCGCTAGTGA+TGG | - | chr3.2:5477347-5477366 | MS.gene97140:CDS | 45.0% | |
| GATGAGCAAGAGGTGGAAAA+AGG | - | chr3.2:5476629-5476648 | MS.gene97140:intron | 45.0% | |
| GGATGTGGACAAAAGTCTAG+GGG | - | chr3.2:5477325-5477344 | MS.gene97140:intron | 45.0% | |
| GGTGGAGTTACAATCTCTGA+CGG | - | chr3.2:5476467-5476486 | MS.gene97140:intron | 45.0% | |
| GTCAAAGTTACTAACAGCGG+TGG | - | chr3.2:5476449-5476468 | MS.gene97140:intron | 45.0% | |
| GTTCTCGCAAACAGTCTCAT+AGG | + | chr3.2:5474981-5475000 | None:intergenic | 45.0% | |
| GTTGCCAAAGGATGATATGG+AGG | - | chr3.2:5474594-5474613 | MS.gene97140:intron | 45.0% | |
| TCAAGAAGCCATAGACTTGC+TGG | - | chr3.2:5477373-5477392 | MS.gene97140:CDS | 45.0% | |
| TCACAACTTGGAGCAGTCTT+GGG | - | chr3.2:5473610-5473629 | MS.gene97140:intron | 45.0% | |
| TCAGGGAAGAGCAAAAGGTA+CGG | + | chr3.2:5474394-5474413 | None:intergenic | 45.0% | |
| TCTCACTAAATTCTGGGCTC+CGG | - | chr3.2:5476547-5476566 | MS.gene97140:intron | 45.0% | |
| TTAAGGACTGCCCGTTATGT+GGG | - | chr3.2:5472833-5472852 | MS.gene97140:intron | 45.0% | |
| TTCACAACTTGGAGCAGTCT+TGG | - | chr3.2:5473609-5473628 | MS.gene97140:intron | 45.0% | |
| TTTAAGGACTGCCCGTTATG+TGG | - | chr3.2:5472832-5472851 | MS.gene97140:intron | 45.0% | |
| ! | AAAACTAACAGAGTGCCACG+TGG | - | chr3.2:5476044-5476063 | MS.gene97140:intron | 45.0% |
| ! | AAAACTAACAGAGTGCCACG+TGG | + | chr3.2:5476063-5476044 | None:intergenic | 45.0% |
| ! | AATTTTCTGCAGCCGAGCAA+TGG | - | chr3.2:5474516-5474535 | MS.gene97140:intron | 45.0% |
| ! | AGGTTCTTTCTTGGTGCAAC+AGG | - | chr3.2:5473017-5473036 | MS.gene97140:CDS | 45.0% |
| ! | ATTTTCTGCAGCCGAGCAAT+GGG | - | chr3.2:5474517-5474536 | MS.gene97140:intron | 45.0% |
| ! | CAGAATTTAGTGAGAGGCAC+AGG | + | chr3.2:5476542-5476561 | None:intergenic | 45.0% |
| ! | CCTATTGCTCAAGCTTTTGG+TGG | - | chr3.2:5476386-5476405 | MS.gene97140:intron | 45.0% |
| ! | GAGGATGTGTCTTTGGAAAG+AGG | - | chr3.2:5472997-5473016 | MS.gene97140:CDS | 45.0% |
| ! | GCTTTATTGAAGGTCATGCC+AGG | - | chr3.2:5472908-5472927 | MS.gene97140:intron | 45.0% |
| ! | GGTTGATGCTTAGCGAAAGA+TGG | - | chr3.2:5473705-5473724 | MS.gene97140:intron | 45.0% |
| ! | TGTCATTTGGACAGAAGGCA+TGG | - | chr3.2:5477223-5477242 | MS.gene97140:intron | 45.0% |
| !! | TCATATCCCAAAGGGCACTT+TGG | + | chr3.2:5472606-5472625 | None:intergenic | 45.0% |
| !! | TCTTGCAAAAGTAGCGGATG+TGG | - | chr3.2:5477310-5477329 | MS.gene97140:intron | 45.0% |
| !!! | GGTGGATTGGTTTTCAGATG+AGG | + | chr3.2:5476285-5476304 | None:intergenic | 45.0% |
| !!! | TATCGGCCTTTTGGCTTCTA+AGG | + | chr3.2:5477926-5477945 | None:intergenic | 45.0% |
| !!! | TTAGAATAATATATTTTTAA+AGG | - | chr3.2:5477111-5477130 | MS.gene97140:intron | 5.0% |
| AGATGAGGATTTACGGTGGC+TGG | + | chr3.2:5476270-5476289 | None:intergenic | 50.0% | |
| AGCAGACTGATAAGGAGGTG+AGG | - | chr3.2:5475367-5475386 | MS.gene97140:intron | 50.0% | |
| AGCATTACTGTCATCCGGAC+GGG | + | chr3.2:5472493-5472512 | None:intergenic | 50.0% | |
| AGTACGACCTTGCAGCTTGA+AGG | + | chr3.2:5474793-5474812 | None:intergenic | 50.0% | |
| AGTTGAGGTAAAAGCCACGG+TGG | + | chr3.2:5476517-5476536 | None:intergenic | 50.0% | |
| CACCTCTTGCTCATCCATTC+CGG | + | chr3.2:5476624-5476643 | None:intergenic | 50.0% | |
| CAGGGACCAATGCCAAAAAC+AGG | - | chr3.2:5476928-5476947 | MS.gene97140:intron | 50.0% | |
| CAGGGACCAATGCCAAAAAC+TGG | + | chr3.2:5476947-5476928 | None:intergenic | 50.0% | |
| CCACGTGGCGTGATATAACT+GGG | - | chr3.2:5476793-5476812 | MS.gene97140:CDS | 50.0% | |
| CGATAGCCGCTATAGAAGGA+TGG | + | chr3.2:5477892-5477911 | None:intergenic | 50.0% | |
| GAACCGATAGCCGCTATAGA+AGG | + | chr3.2:5477896-5477915 | None:intergenic | 50.0% | |
| GAGGGGATAGAATGATGGCT+TGG | - | chr3.2:5475323-5475342 | MS.gene97140:intron | 50.0% | |
| GCAGACTGATAAGGAGGTGA+GGG | - | chr3.2:5475368-5475387 | MS.gene97140:intron | 50.0% | |
| GCGGATGTGGACAAAAGTCT+AGG | - | chr3.2:5477323-5477342 | MS.gene97140:intron | 50.0% | |
| GCTGTAGCTTCAGCAGATCA+AGG | + | chr3.2:5473406-5473425 | None:intergenic | 50.0% | |
| GGAACACACGTGCATCTTAC+CGG | + | chr3.2:5476348-5476367 | None:intergenic | 50.0% | |
| GGAGCCCAGAATTTAGTGAG+AGG | + | chr3.2:5476548-5476567 | None:intergenic | 50.0% | |
| GGTGACTGCTGGTAAGTTGT+AGG | - | chr3.2:5473640-5473659 | MS.gene97140:intron | 50.0% | |
| GTAAAAGCCACGGTGGTTGA+TGG | + | chr3.2:5476510-5476529 | None:intergenic | 50.0% | |
| TAAGGACTGCCCGTTATGTG+GGG | - | chr3.2:5472834-5472853 | MS.gene97140:intron | 50.0% | |
| TGCGAACGTCTTCTGCACAT+AGG | + | chr3.2:5473552-5473571 | None:intergenic | 50.0% | |
| TGTTGTTACCGCCGTTGTAG+TGG | + | chr3.2:5476424-5476443 | None:intergenic | 50.0% | |
| ! | AAGCCAGTGGACTTGAGCAA+CGG | - | chr3.2:5477417-5477436 | MS.gene97140:CDS | 50.0% |
| ! | GGGATAGAATGATGGCTTGG+TGG | - | chr3.2:5475326-5475345 | MS.gene97140:intron | 50.0% |
| ! | GTCTCACCAAAGTGCCCTTT+GGG | - | chr3.2:5472597-5472616 | MS.gene97140:intron | 50.0% |
| ! | TGAGAGGCACAGGTAAGTTG+AGG | + | chr3.2:5476532-5476551 | None:intergenic | 50.0% |
| ! | TGTCTCACCAAAGTGCCCTT+TGG | - | chr3.2:5472596-5472615 | MS.gene97140:intron | 50.0% |
| !! | AGAATGATGGCTTGGTGGCT+GGG | - | chr3.2:5475331-5475350 | MS.gene97140:intron | 50.0% |
| !! | CACAAACGGTGCCACTACAA+CGG | - | chr3.2:5476410-5476429 | MS.gene97140:intron | 50.0% |
| !! | GACGGTGTTGTTAATGGTGG+TGG | + | chr3.2:5476303-5476322 | None:intergenic | 50.0% |
| !! | GGCCTCTTAATTTGTAGGGC+CGG | - | chr3.2:5477156-5477175 | MS.gene97140:intron | 50.0% |
| !! | TAGAATGATGGCTTGGTGGC+TGG | - | chr3.2:5475330-5475349 | MS.gene97140:intron | 50.0% |
| !! | TGGTGTCGAATAGAAGTGCC+TGG | + | chr3.2:5472671-5472690 | None:intergenic | 50.0% |
| ATGGGGACCTTCAAGCTGCA+AGG | - | chr3.2:5474783-5474802 | MS.gene97140:intron | 55.0% | |
| CCCAGTTATATCACGCCACG+TGG | + | chr3.2:5476796-5476815 | None:intergenic | 55.0% | |
| CGGAATGGATGAGCAAGAGG+TGG | - | chr3.2:5476622-5476641 | MS.gene97140:intron | 55.0% | |
| CGTGATATAACTGGGCCACG+TGG | - | chr3.2:5476801-5476820 | MS.gene97140:CDS | 55.0% | |
| GACAAGGTTGGGCAGCTGTT+TGG | - | chr3.2:5475458-5475477 | MS.gene97140:intron | 55.0% | |
| GAGCCCGATGCTGATCTTCA+AGG | - | chr3.2:5472874-5472893 | MS.gene97140:intron | 55.0% | |
| GAGGCCTAAAGCCCTTGCTT+GGG | + | chr3.2:5475820-5475839 | None:intergenic | 55.0% | |
| GCAACCCAAGCAAGGGCTTT+AGG | - | chr3.2:5475813-5475832 | MS.gene97140:CDS | 55.0% | |
| GCACCTGTCATTCAGCTCGA+CGG | + | chr3.2:5476195-5476214 | None:intergenic | 55.0% | |
| GCATTACTGTCATCCGGACG+GGG | + | chr3.2:5472492-5472511 | None:intergenic | 55.0% | |
| GCCACGTGGCGTGATATAAC+TGG | - | chr3.2:5476792-5476811 | MS.gene97140:CDS | 55.0% | |
| GGAGCAGTCTTGGGTATGCT+TGG | - | chr3.2:5473619-5473638 | MS.gene97140:intron | 55.0% | |
| GGCCGGCCCTACAAATTAAG+AGG | + | chr3.2:5477161-5477180 | None:intergenic | 55.0% | |
| TACCCGTTGCTCAAGTCCAC+TGG | + | chr3.2:5477423-5477442 | None:intergenic | 55.0% | |
| TCCTCTTCCATCAACCACCG+TGG | - | chr3.2:5476500-5476519 | MS.gene97140:intron | 55.0% | |
| TGAGGCCTAAAGCCCTTGCT+TGG | + | chr3.2:5475821-5475840 | None:intergenic | 55.0% | |
| TTGCCGTCGAGCTGAATGAC+AGG | - | chr3.2:5476189-5476208 | MS.gene97140:intron | 55.0% | |
| ! | AAGCCCTTGCTTGGGTTGCT+TGG | + | chr3.2:5475812-5475831 | None:intergenic | 55.0% |
| ! | AGCCAGTGGACTTGAGCAAC+GGG | - | chr3.2:5477418-5477437 | MS.gene97140:CDS | 55.0% |
| ! | CTTGGTGCAACAGGCCATGA+GGG | - | chr3.2:5473026-5473045 | MS.gene97140:CDS | 55.0% |
| ! | GTTGATGGAAGAGGACGCGA+CGG | + | chr3.2:5476495-5476514 | None:intergenic | 55.0% |
| ! | GTTTTCATCGCAACCGTCGC+CGG | - | chr3.2:5476326-5476345 | MS.gene97140:intron | 55.0% |
| ! | TCTTGGTGCAACAGGCCATG+AGG | - | chr3.2:5473025-5473044 | MS.gene97140:CDS | 55.0% |
| ! | TGAATCTAGGGCCGGCCTAA+GGG | - | chr3.2:5475786-5475805 | MS.gene97140:CDS | 55.0% |
| ! | TGGGTATGCTTGGTGACTGC+TGG | - | chr3.2:5473629-5473648 | MS.gene97140:intron | 55.0% |
| ! | TTGAATCTAGGGCCGGCCTA+AGG | - | chr3.2:5475785-5475804 | MS.gene97140:CDS | 55.0% |
| !! | AAACGGTGCCACTACAACGG+CGG | - | chr3.2:5476413-5476432 | MS.gene97140:intron | 55.0% |
| !! | GAATGATGGCTTGGTGGCTG+GGG | - | chr3.2:5475332-5475351 | MS.gene97140:intron | 55.0% |
| AGGGCCAAGCAACCCAAGCA+AGG | - | chr3.2:5475805-5475824 | MS.gene97140:CDS | 60.0% | |
| CACGTGCATCTTACCGGCGA+CGG | + | chr3.2:5476342-5476361 | None:intergenic | 60.0% | |
| CAGCTCGACGGCAACTGTTG+TGG | + | chr3.2:5476183-5476202 | None:intergenic | 60.0% | |
| CTACGGGTGCCTCTGATCAG+TGG | + | chr3.2:5475648-5475667 | None:intergenic | 60.0% | |
| GGCCGGAATGGATGAGCAAG+AGG | - | chr3.2:5476619-5476638 | MS.gene97140:intron | 60.0% | |
| GGGCCAAGCAACCCAAGCAA+GGG | - | chr3.2:5475806-5475825 | MS.gene97140:CDS | 60.0% | |
| TCTCCACCGTCGAATCTCGC+CGG | + | chr3.2:5476569-5476588 | None:intergenic | 60.0% | |
| ! | GCTTGGGTTGCTTGGCCCTT+AGG | + | chr3.2:5475804-5475823 | None:intergenic | 60.0% |
| !! | GCCACGGTGGTTGATGGAAG+AGG | + | chr3.2:5476504-5476523 | None:intergenic | 60.0% |
| GGGTTGCTTGGCCCTTAGGC+CGG | + | chr3.2:5475800-5475819 | None:intergenic | 65.0% | |
| TGGGCTCCGGCGAGATTCGA+CGG | - | chr3.2:5476560-5476579 | MS.gene97140:intron | 65.0% | |
| !! | GATGGCTTGGTGGCTGGGGT+GGG | - | chr3.2:5475336-5475355 | MS.gene97140:intron | 65.0% |
| !! | TGATGGCTTGGTGGCTGGGG+TGG | - | chr3.2:5475335-5475354 | MS.gene97140:intron | 65.0% |
| GCTCCGGCGAGATTCGACGG+TGG | - | chr3.2:5476563-5476582 | MS.gene97140:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 5472420 | 5477974 | 5472420 | ID=MS.gene97140 |
| chr3.2 | mRNA | 5472420 | 5477974 | 5472420 | ID=MS.gene97140.t1;Parent=MS.gene97140 |
| chr3.2 | exon | 5477670 | 5477974 | 5477670 | ID=MS.gene97140.t1.exon1;Parent=MS.gene97140.t1 |
| chr3.2 | CDS | 5477670 | 5477974 | 5477670 | ID=cds.MS.gene97140.t1;Parent=MS.gene97140.t1 |
| chr3.2 | exon | 5477347 | 5477578 | 5477347 | ID=MS.gene97140.t1.exon2;Parent=MS.gene97140.t1 |
| chr3.2 | CDS | 5477347 | 5477578 | 5477347 | ID=cds.MS.gene97140.t1;Parent=MS.gene97140.t1 |
| chr3.2 | exon | 5476744 | 5476889 | 5476744 | ID=MS.gene97140.t1.exon3;Parent=MS.gene97140.t1 |
| chr3.2 | CDS | 5476744 | 5476889 | 5476744 | ID=cds.MS.gene97140.t1;Parent=MS.gene97140.t1 |
| chr3.2 | exon | 5475779 | 5475866 | 5475779 | ID=MS.gene97140.t1.exon4;Parent=MS.gene97140.t1 |
| chr3.2 | CDS | 5475779 | 5475866 | 5475779 | ID=cds.MS.gene97140.t1;Parent=MS.gene97140.t1 |
| chr3.2 | exon | 5475520 | 5475666 | 5475520 | ID=MS.gene97140.t1.exon5;Parent=MS.gene97140.t1 |
| chr3.2 | CDS | 5475520 | 5475666 | 5475520 | ID=cds.MS.gene97140.t1;Parent=MS.gene97140.t1 |
| chr3.2 | exon | 5472955 | 5473104 | 5472955 | ID=MS.gene97140.t1.exon6;Parent=MS.gene97140.t1 |
| chr3.2 | CDS | 5472955 | 5473104 | 5472955 | ID=cds.MS.gene97140.t1;Parent=MS.gene97140.t1 |
| chr3.2 | exon | 5472420 | 5472491 | 5472420 | ID=MS.gene97140.t1.exon7;Parent=MS.gene97140.t1 |
| chr3.2 | CDS | 5472420 | 5472491 | 5472420 | ID=cds.MS.gene97140.t1;Parent=MS.gene97140.t1 |
| Gene Sequence |
| Protein sequence |
