AlfalfaGEDB | MS.gene98721

M. sativa cultivar XinJiangDaYe / MS.gene98721

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98721.t1	XP_003597517.1	100	152	0	0	1	152	60	211	8.70E-77	296.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98721.t1	Q9SRR7	71.5	151	41	1	1	151	1	149	5.7e-53	208.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98721.t1	G7IHU6	100.0	152	0	0	1	152	60	211	6.3e-77	296.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04918	MS.gene98721	0.822632	2.14E-53	-1.69E-46
MS.gene04920	MS.gene98721	0.803047	4.20E-49	-1.69E-46
MS.gene049283	MS.gene98721	0.818291	2.12E-52	-1.69E-46
MS.gene049368	MS.gene98721	0.813535	2.44E-51	-1.69E-46
MS.gene049499	MS.gene98721	0.812854	3.44E-51	-1.69E-46
MS.gene049711	MS.gene98721	0.806429	8.26E-50	-1.69E-46
MS.gene049983	MS.gene98721	0.81016	1.32E-50	-1.69E-46
MS.gene04998	MS.gene98721	0.815404	9.41E-52	-1.69E-46
MS.gene050238	MS.gene98721	0.821705	3.50E-53	-1.69E-46
MS.gene050414	MS.gene98721	0.874993	4.37E-68	-1.69E-46
MS.gene050646	MS.gene98721	0.805424	1.34E-49	-1.69E-46
MS.gene050669	MS.gene98721	0.80634	8.63E-50	-1.69E-46
MS.gene050759	MS.gene98721	0.819714	1.00E-52	-1.69E-46
MS.gene050962	MS.gene98721	0.813634	2.32E-51	-1.69E-46
MS.gene051043	MS.gene98721	0.802132	6.49E-49	-1.69E-46
MS.gene051226	MS.gene98721	0.825693	4.08E-54	-1.69E-46
MS.gene051279	MS.gene98721	0.860976	1.42E-63	-1.69E-46
MS.gene051490	MS.gene98721	0.810035	1.41E-50	-1.69E-46
MS.gene051823	MS.gene98721	0.812986	3.22E-51	-1.69E-46
MS.gene052016	MS.gene98721	0.999205	7.13E-296	-1.69E-46
MS.gene052463	MS.gene98721	0.853082	3.02E-61	-1.69E-46
MS.gene052493	MS.gene98721	0.821983	3.02E-53	-1.69E-46
MS.gene052533	MS.gene98721	0.810962	8.88E-51	-1.69E-46
MS.gene053079	MS.gene98721	0.809152	2.18E-50	-1.69E-46
MS.gene053143	MS.gene98721	0.815843	7.51E-52	-1.69E-46
MS.gene053171	MS.gene98721	0.806206	9.21E-50	-1.69E-46
MS.gene053620	MS.gene98721	0.844222	8.64E-59	-1.69E-46
MS.gene054178	MS.gene98721	0.89743	1.42E-76	-1.69E-46
MS.gene05423	MS.gene98721	0.818524	1.87E-52	-1.69E-46
MS.gene054576	MS.gene98721	0.802481	5.50E-49	-1.69E-46
MS.gene05458	MS.gene98721	0.807314	5.37E-50	-1.69E-46
MS.gene054617	MS.gene98721	0.863018	3.36E-64	-1.69E-46
MS.gene054824	MS.gene98721	0.804287	2.32E-49	-1.69E-46
MS.gene054892	MS.gene98721	0.881343	2.60E-70	-1.69E-46
MS.gene054893	MS.gene98721	0.879426	1.26E-69	-1.69E-46
MS.gene055386	MS.gene98721	0.816982	4.18E-52	-1.69E-46
MS.gene05539	MS.gene98721	0.874274	7.68E-68	-1.69E-46
MS.gene055513	MS.gene98721	0.842181	3.02E-58	-1.69E-46
MS.gene05552	MS.gene98721	0.834362	3.13E-56	-1.69E-46
MS.gene056082	MS.gene98721	0.816627	5.02E-52	-1.69E-46
MS.gene056308	MS.gene98721	0.805767	1.14E-49	-1.69E-46
MS.gene05686	MS.gene98721	0.815658	8.26E-52	-1.69E-46
MS.gene057155	MS.gene98721	0.806585	7.66E-50	-1.69E-46
MS.gene057294	MS.gene98721	0.803043	4.21E-49	-1.69E-46
MS.gene057919	MS.gene98721	0.801396	9.18E-49	-1.69E-46
MS.gene058159	MS.gene98721	0.800421	1.45E-48	-1.69E-46
MS.gene058429	MS.gene98721	0.800077	1.71E-48	-1.69E-46
MS.gene058649	MS.gene98721	0.818752	1.66E-52	-1.69E-46
MS.gene058681	MS.gene98721	0.801228	9.94E-49	-1.69E-46
MS.gene059170	MS.gene98721	0.831183	1.93E-55	-1.69E-46
MS.gene059634	MS.gene98721	0.800328	1.52E-48	-1.69E-46
MS.gene059778	MS.gene98721	0.810874	9.28E-51	-1.69E-46
MS.gene060259	MS.gene98721	0.824988	5.99E-54	-1.69E-46
MS.gene060413	MS.gene98721	0.802438	5.61E-49	-1.69E-46
MS.gene060435	MS.gene98721	0.803571	3.27E-49	-1.69E-46
MS.gene060522	MS.gene98721	0.816861	4.44E-52	-1.69E-46
MS.gene060932	MS.gene98721	0.810977	8.81E-51	-1.69E-46
MS.gene061100	MS.gene98721	0.856378	3.35E-62	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98721.t1	MTR_2g098890	100.000	152	0	0	1	152	60	211	1.08e-107	305
MS.gene98721.t1	MTR_4g067270	83.553	152	23	1	1	152	1	150	3.84e-87	251
MS.gene98721.t1	MTR_7g089760	69.333	150	44	1	1	150	1	148	1.33e-62	189
MS.gene98721.t1	MTR_4g115170	47.771	157	68	2	5	147	64	220	1.80e-38	130
MS.gene98721.t1	MTR_5g079340	40.714	140	78	2	4	143	3	137	1.60e-31	110
MS.gene98721.t1	MTR_8g107110	42.958	142	76	2	2	143	21	157	4.63e-31	109
MS.gene98721.t1	MTR_3g067610	39.161	143	79	2	1	143	1	135	6.68e-30	106
MS.gene98721.t1	MTR_3g067610	42.466	73	40	1	77	149	2	72	5.32e-12	60.1
MS.gene98721.t1	MTR_1g032070	40.816	147	83	2	5	151	46	188	1.26e-29	107
MS.gene98721.t1	MTR_1g046950	41.429	140	80	1	4	143	3	140	1.58e-29	105
MS.gene98721.t1	MTR_7g075040	40.667	150	82	3	3	146	45	193	3.79e-29	105
MS.gene98721.t1	MTR_8g066630	34.247	146	93	2	4	148	16	159	3.58e-28	102
MS.gene98721.t1	MTR_7g074240	40.816	147	79	2	6	144	25	171	8.76e-28	102
MS.gene98721.t1	MTR_7g087610	42.143	140	77	2	4	143	11	146	9.18e-28	100
MS.gene98721.t1	MTR_6g025320	42.143	140	77	2	4	143	11	146	1.54e-27	100
MS.gene98721.t1	MTR_5g088320	42.143	140	77	2	4	143	11	146	1.58e-27	100
MS.gene98721.t1	MTR_5g088320	43.478	69	37	1	75	143	7	73	4.81e-11	57.8
MS.gene98721.t1	MTR_8g105230	40.845	142	80	2	5	146	36	173	4.55e-27	100
MS.gene98721.t1	MTR_1g047100	39.286	140	82	2	4	143	3	139	4.16e-26	96.7
MS.gene98721.t1	MTR_5g017510	40.000	145	79	4	4	146	47	185	5.87e-26	97.4
MS.gene98721.t1	MTR_5g017560	40.000	145	79	4	4	146	47	185	5.87e-26	97.4
MS.gene98721.t1	MTR_8g036075	39.456	147	83	3	5	146	49	194	8.36e-26	97.4
MS.gene98721.t1	MTR_5g017550	38.462	143	83	2	4	146	47	184	1.41e-25	96.7
MS.gene98721.t1	MTR_1g076650	39.568	139	80	2	5	143	12	146	8.68e-25	93.2
MS.gene98721.t1	MTR_1g076650	46.377	69	35	1	75	143	7	73	7.74e-12	59.7
MS.gene98721.t1	MTR_6g079570	37.931	145	84	3	2	145	23	162	1.17e-24	93.6
MS.gene98721.t1	MTR_1g041285	39.161	143	83	2	5	147	12	150	1.24e-24	92.8
MS.gene98721.t1	MTR_7g090450	37.589	141	85	3	5	143	73	212	1.57e-23	92.0
MS.gene98721.t1	MTR_4g086260	37.143	140	82	2	4	143	56	189	9.78e-23	89.4
MS.gene98721.t1	MTR_6g023460	34.559	136	84	2	8	143	11	141	1.30e-22	87.4
MS.gene98721.t1	MTR_4g103655	36.691	139	83	2	5	143	6	139	7.78e-22	85.5
MS.gene98721.t1	MTR_1g030440	36.424	151	80	3	1	143	18	160	1.68e-21	85.5
MS.gene98721.t1	MTR_4g103650	35.971	139	84	2	5	143	2	135	4.99e-21	83.2
MS.gene98721.t1	MTR_1g071150	38.129	139	81	2	5	143	12	145	8.55e-21	83.2
MS.gene98721.t1	MTR_4g103630	35.252	139	85	2	5	143	6	139	1.60e-20	82.0
MS.gene98721.t1	MTR_4g112460	34.028	144	87	3	4	144	10	148	5.49e-20	81.6
MS.gene98721.t1	MTR_3g089090	34.286	140	85	3	6	144	6	139	1.43e-19	79.7
MS.gene98721.t1	MTR_3g089070	34.286	140	85	3	6	144	7	140	1.53e-19	79.7
MS.gene98721.t1	MTR_0168s0120	41.228	114	63	2	30	143	1	110	1.83e-19	78.6
MS.gene98721.t1	MTR_6g025320	41.228	114	63	2	30	143	1	110	1.83e-19	78.6
MS.gene98721.t1	MTR_3g088655	34.395	157	83	3	1	143	4	154	3.22e-19	79.3
MS.gene98721.t1	MTR_1g096490	34.752	141	85	3	6	146	336	469	4.44e-19	82.8
MS.gene98721.t1	MTR_4g066660	33.099	142	89	2	6	147	378	513	5.95e-19	82.8
MS.gene98721.t1	MTR_5g008705	33.333	132	84	2	12	143	1	128	2.04e-18	76.3
MS.gene98721.t1	MTR_1g026190	31.206	141	91	2	6	146	388	522	5.22e-18	80.1
MS.gene98721.t1	MTR_5g092810	33.333	141	88	2	6	146	398	532	6.18e-18	79.7
MS.gene98721.t1	MTR_7g074020	31.250	144	95	2	5	148	30	169	7.92e-18	75.9
MS.gene98721.t1	MTR_7g115040	41.007	139	78	2	5	143	12	146	9.31e-18	75.1
MS.gene98721.t1	MTR_1g054865	31.655	139	88	2	6	144	467	598	1.78e-17	78.6
MS.gene98721.t1	MTR_3g051770	31.724	145	92	2	6	146	389	530	1.79e-17	78.6
MS.gene98721.t1	MTR_8g069915	30.070	143	92	3	5	144	12	149	2.81e-17	74.3
MS.gene98721.t1	MTR_5g009830	34.043	141	87	2	6	146	372	506	3.06e-17	77.8
MS.gene98721.t1	MTR_6g007613	31.944	144	94	2	5	148	29	168	3.86e-17	74.3
MS.gene98721.t1	MTR_4g132070	31.915	141	90	2	6	146	397	531	5.28e-17	77.0
MS.gene98721.t1	MTR_5g089320	32.624	141	89	2	6	146	374	508	5.29e-17	77.0
MS.gene98721.t1	MTR_3g098090	31.206	141	90	2	6	146	338	471	7.22e-17	76.6
MS.gene98721.t1	MTR_8g095440	32.624	141	88	2	6	146	336	469	1.78e-16	75.5
MS.gene98721.t1	MTR_7g091890	33.333	141	89	2	6	146	364	499	1.87e-16	75.5
MS.gene98721.t1	MTR_4g127560	49.315	73	37	0	72	144	122	194	2.69e-16	72.4
MS.gene98721.t1	MTR_8g099095	33.333	141	88	2	6	146	372	506	3.18e-16	74.7
MS.gene98721.t1	MTR_0028s0170	31.915	141	90	2	6	146	384	518	3.40e-16	74.7
MS.gene98721.t1	MTR_3g098070	30.496	141	91	2	6	146	335	468	7.57e-16	73.6
MS.gene98721.t1	MTR_1g041150	31.915	141	89	2	6	146	424	557	9.01e-16	73.6
MS.gene98721.t1	MTR_7g011010	34.375	128	70	3	17	144	85	198	1.60e-15	70.5
MS.gene98721.t1	MTR_3g083470	31.944	144	84	3	4	147	92	221	2.42e-15	70.5
MS.gene98721.t1	MTR_8g078270	32.168	143	91	3	2	143	50	187	3.21e-15	69.7
MS.gene98721.t1	MTR_6g007613	34.286	105	67	1	5	109	29	131	3.92e-15	68.6
MS.gene98721.t1	MTR_4g132040	29.787	141	93	2	6	146	401	535	5.45e-15	71.2
MS.gene98721.t1	MTR_5g099240	34.043	141	86	3	6	146	402	535	8.63e-15	70.9
MS.gene98721.t1	MTR_5g099240	33.333	141	87	2	6	146	330	463	8.85e-15	70.9
MS.gene98721.t1	MTR_4g082050	51.515	66	30	1	79	144	76	139	9.97e-15	67.4
MS.gene98721.t1	MTR_1g055255	31.206	141	90	2	6	146	430	563	9.98e-15	70.5
MS.gene98721.t1	MTR_5g008695	34.513	113	72	1	30	142	2	112	1.14e-14	66.2
MS.gene98721.t1	MTR_7g074020	30.894	123	81	2	5	127	30	148	2.68e-14	66.6
MS.gene98721.t1	MTR_1g052530	33.333	141	89	2	6	146	358	493	4.36e-14	68.6
MS.gene98721.t1	MTR_7g106710	29.787	141	92	2	6	146	441	574	1.10e-13	67.8
MS.gene98721.t1	MTR_4g107490	33.099	142	88	4	6	146	379	514	2.00e-13	67.0
MS.gene98721.t1	MTR_5g025690	33.594	128	71	3	17	144	83	196	2.20e-13	64.7
MS.gene98721.t1	MTR_5g027000	27.407	135	94	2	6	140	23	153	1.50e-12	62.0
MS.gene98721.t1	MTR_7g068710	30.822	146	88	4	5	146	361	497	3.89e-12	63.2
MS.gene98721.t1	MTR_3g055480	48.485	66	31	2	86	150	51	114	5.07e-12	59.3
MS.gene98721.t1	MTR_5g011850	30.714	140	91	3	4	143	11	144	5.44e-12	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98721.t1	AT2G43290	71.242	153	41	1	1	150	61	213	2.97e-75	223
MS.gene98721.t1	AT1G05990	75.497	151	36	1	1	151	1	150	4.89e-74	218
MS.gene98721.t1	AT3G07490	76.316	152	34	1	1	152	1	150	8.51e-71	210
MS.gene98721.t1	AT3G59440	69.333	150	43	1	3	152	49	195	1.28e-66	201
MS.gene98721.t1	AT4G03290	66.883	154	49	2	1	152	1	154	1.22e-64	194
MS.gene98721.t1	AT4G12860	63.816	152	53	1	1	152	1	150	1.11e-59	182
MS.gene98721.t1	AT1G18210	40.141	142	77	2	2	143	20	153	1.07e-31	111
MS.gene98721.t1	AT1G18210	40.141	142	77	2	2	143	20	153	1.07e-31	111
MS.gene98721.t1	AT1G24620	44.366	142	75	2	5	146	37	174	4.48e-30	108
MS.gene98721.t1	AT1G73630	39.716	141	77	2	5	145	20	152	2.78e-29	105
MS.gene98721.t1	AT5G37770	39.041	146	85	2	4	147	16	159	3.14e-29	105
MS.gene98721.t1	AT5G37770	39.041	146	85	2	4	147	16	159	3.14e-29	105
MS.gene98721.t1	AT5G37780	42.143	140	77	2	4	143	11	146	5.42e-28	101
MS.gene98721.t1	AT5G37780	43.478	69	37	1	75	143	7	73	4.54e-11	57.8
MS.gene98721.t1	AT1G66410	42.143	140	77	2	4	143	11	146	5.42e-28	101
MS.gene98721.t1	AT1G66410	43.478	69	37	1	75	143	7	73	4.54e-11	57.8
MS.gene98721.t1	AT1G66400	37.762	143	87	1	5	147	15	155	1.06e-27	101
MS.gene98721.t1	AT3G56800	42.143	140	77	2	4	143	11	146	1.16e-27	100
MS.gene98721.t1	AT2G27030	42.143	140	77	2	4	143	11	146	1.16e-27	100
MS.gene98721.t1	AT2G41110	42.143	140	77	2	4	143	11	146	1.16e-27	100
MS.gene98721.t1	AT3G43810	42.143	140	77	2	4	143	11	146	1.62e-27	100
MS.gene98721.t1	AT2G27030	42.143	140	77	2	4	143	11	146	3.61e-27	100
MS.gene98721.t1	AT5G21274	41.429	140	78	2	4	143	11	146	5.87e-27	99.0
MS.gene98721.t1	AT3G43810	42.143	140	77	2	4	143	11	146	9.18e-27	100
MS.gene98721.t1	AT4G20780	36.774	155	82	1	6	144	30	184	9.24e-25	94.4
MS.gene98721.t1	AT5G44460	40.000	150	76	4	6	144	29	175	1.39e-24	94.0
MS.gene98721.t1	AT2G41110	38.816	152	77	3	4	143	11	158	1.84e-24	92.8
MS.gene98721.t1	AT3G22930	39.860	143	82	2	5	147	35	173	2.22e-24	93.2
MS.gene98721.t1	AT4G14640	39.286	140	81	2	4	143	12	147	4.18e-24	91.7
MS.gene98721.t1	AT2G15680	38.571	140	80	2	4	143	49	182	7.27e-24	92.0
MS.gene98721.t1	AT5G37780	38.065	155	77	3	4	143	11	161	9.86e-24	91.3
MS.gene98721.t1	AT2G36180	39.568	139	81	2	6	143	1	137	1.22e-22	87.8
MS.gene98721.t1	AT3G03400	34.559	136	87	1	1	136	1	134	1.33e-22	87.4
MS.gene98721.t1	AT5G37780	42.400	125	68	2	19	143	13	133	1.49e-22	87.4
MS.gene98721.t1	AT5G17470	35.714	140	84	3	6	143	3	138	1.83e-22	87.4
MS.gene98721.t1	AT1G66410	42.400	125	68	2	19	143	36	156	1.93e-22	87.8
MS.gene98721.t1	AT2G41100	33.766	154	86	2	4	143	11	162	1.99e-22	91.3
MS.gene98721.t1	AT2G41100	35.404	161	79	4	4	145	100	254	4.22e-22	90.1
MS.gene98721.t1	AT2G41100	33.766	154	86	2	4	143	11	162	1.99e-22	91.3
MS.gene98721.t1	AT2G41100	35.404	161	79	4	4	145	100	254	4.22e-22	90.1
MS.gene98721.t1	AT1G32250	32.886	149	94	2	4	148	15	161	2.06e-22	87.8
MS.gene98721.t1	AT2G41100	35.404	161	79	4	4	145	65	219	2.58e-22	90.1
MS.gene98721.t1	AT2G41100	33.058	121	64	3	38	143	9	127	9.55e-14	67.0
MS.gene98721.t1	AT2G41100	35.404	161	79	4	4	145	65	219	2.58e-22	90.1
MS.gene98721.t1	AT2G41100	33.058	121	64	3	38	143	9	127	9.55e-14	67.0
MS.gene98721.t1	AT2G41100	35.404	161	79	4	4	145	65	219	2.58e-22	90.1
MS.gene98721.t1	AT2G41100	33.058	121	64	3	38	143	9	127	9.55e-14	67.0
MS.gene98721.t1	AT5G37780	42.400	125	68	2	19	143	52	172	2.66e-22	87.8
MS.gene98721.t1	AT3G10190	36.364	143	80	4	5	143	70	205	4.93e-22	87.8
MS.gene98721.t1	AT1G21550	36.842	152	78	5	3	143	8	152	3.33e-21	84.3
MS.gene98721.t1	AT5G42380	35.417	144	90	2	1	144	45	185	1.25e-20	83.6
MS.gene98721.t1	AT3G50770	34.932	146	82	4	5	143	64	203	3.15e-20	83.2
MS.gene98721.t1	AT1G76040	34.752	141	86	2	6	146	179	313	4.52e-20	84.7
MS.gene98721.t1	AT1G76040	34.752	141	86	2	6	146	179	313	4.52e-20	84.7
MS.gene98721.t1	AT1G66410	41.228	114	63	2	30	143	1	110	6.87e-20	79.7
MS.gene98721.t1	AT1G66410	41.228	114	63	2	30	143	1	110	6.87e-20	79.7
MS.gene98721.t1	AT1G76640	34.286	140	90	1	5	144	22	159	7.63e-20	80.9
MS.gene98721.t1	AT2G41090	33.571	140	86	2	4	143	11	143	8.45e-20	81.6
MS.gene98721.t1	AT1G76040	34.752	141	86	2	6	146	417	551	1.08e-19	84.7
MS.gene98721.t1	AT3G43810	41.228	114	63	2	30	143	1	110	1.92e-19	78.6
MS.gene98721.t1	AT3G43810	41.228	114	63	2	30	143	1	110	1.92e-19	78.6
MS.gene98721.t1	AT4G14640	39.200	125	72	2	19	143	9	129	2.31e-19	79.0
MS.gene98721.t1	AT1G76650	34.286	140	87	2	5	144	43	177	5.87e-19	79.0
MS.gene98721.t1	AT1G76650	34.286	140	87	2	5	144	43	177	5.87e-19	79.0
MS.gene98721.t1	AT3G20410	33.333	141	88	2	6	146	397	531	1.35e-18	81.6
MS.gene98721.t1	AT3G20410	33.333	141	88	2	6	146	397	531	1.35e-18	81.6
MS.gene98721.t1	AT1G50700	33.333	141	88	2	6	146	379	513	1.42e-18	81.6
MS.gene98721.t1	AT5G12180	33.333	141	88	2	6	146	379	513	1.90e-18	81.3
MS.gene98721.t1	AT2G41410	34.043	141	90	3	4	143	69	207	2.30e-18	78.6
MS.gene98721.t1	AT1G35670	32.624	141	88	3	6	146	332	465	3.63e-18	80.5
MS.gene98721.t1	AT3G51920	30.345	145	97	2	4	148	11	151	7.98e-18	75.5
MS.gene98721.t1	AT3G03000	33.333	144	93	2	5	148	20	160	8.73e-18	75.9
MS.gene98721.t1	AT3G03000	41.538	65	38	0	4	68	93	157	8.21e-11	57.4
MS.gene98721.t1	AT1G18530	32.867	143	88	3	5	144	7	144	1.25e-17	75.1
MS.gene98721.t1	AT4G09570	32.624	141	88	3	6	146	331	464	1.66e-17	78.6
MS.gene98721.t1	AT4G21940	33.333	141	88	2	6	146	407	541	1.74e-17	78.6
MS.gene98721.t1	AT4G21940	33.333	141	88	2	6	146	407	541	1.96e-17	78.6
MS.gene98721.t1	AT5G19360	33.333	141	88	2	6	146	374	508	4.06e-17	77.4
MS.gene98721.t1	AT5G12480	34.752	141	88	2	6	146	271	407	4.50e-17	77.4
MS.gene98721.t1	AT3G25600	32.168	143	89	3	5	144	12	149	5.62e-17	73.6
MS.gene98721.t1	AT5G12480	34.752	141	88	2	6	146	365	501	6.70e-17	77.0
MS.gene98721.t1	AT3G57530	35.036	137	83	2	10	146	373	503	7.91e-17	76.6
MS.gene98721.t1	AT2G41860	33.803	142	87	3	6	146	360	495	1.01e-16	76.3
MS.gene98721.t1	AT2G41860	33.803	142	87	3	6	146	360	495	1.02e-16	76.3
MS.gene98721.t1	AT2G31500	34.667	150	88	5	3	146	365	510	1.03e-16	76.3
MS.gene98721.t1	AT3G50360	30.556	144	96	2	5	148	27	166	1.12e-16	72.8
MS.gene98721.t1	AT4G35310	34.043	141	86	3	6	146	403	536	2.18e-16	75.5
MS.gene98721.t1	AT4G35310	34.043	141	86	3	6	146	403	536	2.18e-16	75.5
MS.gene98721.t1	AT3G10660	31.469	143	91	2	6	148	492	627	2.35e-16	75.5
MS.gene98721.t1	AT3G10660	31.469	143	91	2	6	148	492	627	2.35e-16	75.5
MS.gene98721.t1	AT2G38910	32.867	143	89	3	6	148	440	575	2.54e-16	75.1
MS.gene98721.t1	AT5G04870	31.250	144	92	2	6	149	456	592	2.88e-16	75.1
MS.gene98721.t1	AT1G74740	33.803	142	87	3	6	146	365	500	3.12e-16	75.1
MS.gene98721.t1	AT4G38230	32.624	141	88	2	6	146	186	319	3.70e-16	74.3
MS.gene98721.t1	AT4G23650	31.915	141	90	2	6	146	384	518	4.70e-16	74.3
MS.gene98721.t1	AT5G23580	31.655	139	88	2	6	144	328	459	5.01e-16	74.3
MS.gene98721.t1	AT2G17290	33.333	141	87	3	6	146	391	524	5.42e-16	74.3
MS.gene98721.t1	AT2G17290	33.333	141	87	3	6	146	391	524	5.42e-16	74.3
MS.gene98721.t1	AT4G37010	29.167	144	98	2	5	148	27	166	5.45e-16	71.2
MS.gene98721.t1	AT4G37010	29.167	144	98	2	5	148	31	170	6.24e-16	71.2
MS.gene98721.t1	AT1G76650	33.571	140	78	4	5	144	43	167	7.03e-16	70.9
MS.gene98721.t1	AT4G38230	32.624	141	88	2	6	146	360	493	7.86e-16	73.9
MS.gene98721.t1	AT4G38230	32.624	141	88	2	6	146	330	463	8.17e-16	73.6
MS.gene98721.t1	AT4G38230	32.624	141	88	2	6	146	330	463	8.17e-16	73.6
MS.gene98721.t1	AT4G04720	31.915	141	90	2	6	146	385	519	1.44e-15	73.2
MS.gene98721.t1	AT4G04720	31.915	141	90	2	6	146	385	519	1.44e-15	73.2
MS.gene98721.t1	AT1G61950	33.571	140	87	2	6	145	405	538	5.73e-15	71.2
MS.gene98721.t1	AT4G04740	30.496	141	92	2	6	146	374	508	5.77e-15	71.2
MS.gene98721.t1	AT4G04740	30.496	141	92	2	6	146	374	508	5.77e-15	71.2
MS.gene98721.t1	AT4G04740	30.496	141	92	2	6	146	374	508	5.77e-15	71.2
MS.gene98721.t1	AT4G04740	30.496	141	92	2	6	146	374	508	5.77e-15	71.2
MS.gene98721.t1	AT4G04740	30.496	141	92	2	6	146	374	508	5.77e-15	71.2
MS.gene98721.t1	AT4G04740	30.496	141	92	2	6	146	374	508	5.77e-15	71.2
MS.gene98721.t1	AT4G04695	31.206	141	91	2	6	146	337	471	6.47e-15	71.2
MS.gene98721.t1	AT1G18890	33.099	142	88	3	6	146	369	504	2.34e-14	69.7
MS.gene98721.t1	AT1G50700	28.144	167	88	3	6	146	379	539	4.92e-14	68.6
MS.gene98721.t1	AT2G41100	33.871	124	57	4	41	145	12	129	6.43e-14	66.2
MS.gene98721.t1	AT4G14640	37.374	99	60	1	4	102	12	108	8.64e-14	64.3
MS.gene98721.t1	AT3G29000	30.709	127	72	1	22	148	84	194	2.28e-13	64.7
MS.gene98721.t1	AT4G04710	30.496	141	92	2	6	146	338	472	2.77e-13	66.6
MS.gene98721.t1	AT4G04710	30.496	141	92	2	6	146	324	458	2.77e-13	66.2
MS.gene98721.t1	AT4G04700	30.216	139	91	2	6	144	337	469	2.85e-13	66.2
MS.gene98721.t1	AT4G04710	30.496	141	92	2	6	146	351	485	3.22e-13	66.2
MS.gene98721.t1	AT5G19450	32.394	142	90	3	6	146	363	499	6.29e-13	65.5
MS.gene98721.t1	AT5G19450	32.394	142	90	3	6	146	363	499	6.29e-13	65.5
MS.gene98721.t1	AT5G39670	42.105	76	44	0	68	143	124	199	1.12e-12	63.2
MS.gene98721.t1	AT3G22930	36.735	98	60	1	5	102	35	130	1.52e-12	61.2
MS.gene98721.t1	AT3G03410	28.777	139	86	2	7	145	4	129	3.51e-12	60.5
MS.gene98721.t1	AT4G04710	30.070	143	92	3	6	146	351	487	5.63e-12	62.8
MS.gene98721.t1	AT2G17890	29.167	144	90	5	5	144	415	550	6.82e-12	62.4
MS.gene98721.t1	AT2G41100	45.312	64	33	1	82	145	14	75	8.00e-12	59.7
MS.gene98721.t1	AT1G62820	30.000	140	92	3	4	143	12	145	2.25e-11	58.5
MS.gene98721.t1	AT3G51850	28.873	142	96	2	5	146	359	495	5.96e-11	59.7
MS.gene98721.t1	AT1G12310	29.286	140	93	3	4	143	12	145	5.97e-11	57.4

Find 33 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGATTCCTTGGAGAATTT+AGG	0.247504	2.1:+5557458	MS.gene98721:CDS
TCAACTCTTTCTTTGTTATA+CGG	0.252007	2.1:-5557436	None:intergenic
AAATGGTTTGGTTGATTATA+AGG	0.252764	2.1:+5557769	MS.gene98721:CDS
CGTCGTTGCGGTCAAACATT+TGG	0.299949	2.1:-5557409	None:intergenic
TGATGAGTTGAGATCGGTTT+TGG	0.312846	2.1:+5557673	MS.gene98721:CDS
AAAACACGTTTGAGTTCATT+TGG	0.342285	2.1:-5557386	None:intergenic
GAAGACTGTAAGAAGATGAT+AGG	0.350621	2.1:+5557728	MS.gene98721:CDS
ATTTGACTCAGCTCTTTGTC+AGG	0.382764	2.1:-5557491	None:intergenic
GAAAGAGTTGAATGATTCCT+TGG	0.417781	2.1:+5557448	MS.gene98721:CDS
AAGAGGAGGAAGAAGATATG+AGG	0.424538	2.1:+5557603	MS.gene98721:CDS
GGAGTTTAAGCAAATGATGA+AGG	0.441958	2.1:+5557790	MS.gene98721:CDS
ATAGGGACTGTTGATGTTGA+TGG	0.445399	2.1:+5557746	MS.gene98721:CDS
TGATGTTGATGGAAATGGTT+TGG	0.447188	2.1:+5557757	MS.gene98721:CDS
ACTGTTGATGTTGATGGAAA+TGG	0.457780	2.1:+5557752	MS.gene98721:CDS
AGAGGAGGAAGAAGATATGA+GGG	0.472178	2.1:+5557604	MS.gene98721:CDS
GTGTTTGATCAGAACGGTGA+TGG	0.513651	2.1:+5557638	MS.gene98721:CDS
GAGTGAACGTGATGAAGAGG+AGG	0.519722	2.1:+5557589	MS.gene98721:CDS
AAGCAAATGATGAAGGGTGG+TGG	0.523305	2.1:+5557797	MS.gene98721:CDS
TTTGACTCAGCTCTTTGTCA+GGG	0.541354	2.1:-5557490	None:intergenic
TAGCGTTGATGAGTTGAGAT+CGG	0.560869	2.1:+5557667	MS.gene98721:CDS
AAGACTGTAAGAAGATGATA+GGG	0.560997	2.1:+5557729	MS.gene98721:CDS
CAATATCCACACATCCATCT+CGG	0.578574	2.1:-5557535	None:intergenic
TATGAGTGAACGTGATGAAG+AGG	0.579424	2.1:+5557586	MS.gene98721:CDS
AAGATTGATGTGAACCGAGA+TGG	0.581296	2.1:+5557521	MS.gene98721:CDS
AGATGGATGTGTGGATATTG+AGG	0.593221	2.1:+5557538	MS.gene98721:CDS
TTATACGGCCATCGTCGTTG+CGG	0.593300	2.1:-5557421	None:intergenic
ATGTTTGACCGCAACGACGA+TGG	0.596739	2.1:+5557413	MS.gene98721:CDS
GAAGATTCCTAAATTCTCCA+AGG	0.608715	2.1:-5557465	None:intergenic
GTTTCGTTGGGATTGAAACA+AGG	0.613024	2.1:+5557695	MS.gene98721:CDS
GAGTTTAAGCAAATGATGAA+GGG	0.617670	2.1:+5557791	MS.gene98721:CDS
TTTAAGCAAATGATGAAGGG+TGG	0.643324	2.1:+5557794	MS.gene98721:CDS
TTCAACGTGTTTGATCAGAA+CGG	0.663829	2.1:+5557632	MS.gene98721:CDS
TGTGAACCGAGATGGATGTG+TGG	0.734567	2.1:+5557529	MS.gene98721:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCAACTCTTTCTTTGTTATA+CGG	-	chr2.1:5557439-5557458	None:intergenic	25.0%
!!!	AAATGGTTTGGTTGATTATA+AGG	+	chr2.1:5557769-5557788	MS.gene98721:CDS	25.0%
	AAGACTGTAAGAAGATGATA+GGG	+	chr2.1:5557729-5557748	MS.gene98721:CDS	30.0%
	AATGATTCCTTGGAGAATTT+AGG	+	chr2.1:5557458-5557477	MS.gene98721:CDS	30.0%
	GAGTTTAAGCAAATGATGAA+GGG	+	chr2.1:5557791-5557810	MS.gene98721:CDS	30.0%
!	AAAACACGTTTGAGTTCATT+TGG	-	chr2.1:5557389-5557408	None:intergenic	30.0%
	GAAAGAGTTGAATGATTCCT+TGG	+	chr2.1:5557448-5557467	MS.gene98721:CDS	35.0%
	GAAGACTGTAAGAAGATGAT+AGG	+	chr2.1:5557728-5557747	MS.gene98721:CDS	35.0%
	GAAGATTCCTAAATTCTCCA+AGG	-	chr2.1:5557468-5557487	None:intergenic	35.0%
	GGAGTTTAAGCAAATGATGA+AGG	+	chr2.1:5557790-5557809	MS.gene98721:CDS	35.0%
	TTCAACGTGTTTGATCAGAA+CGG	+	chr2.1:5557632-5557651	MS.gene98721:CDS	35.0%
	TTTAAGCAAATGATGAAGGG+TGG	+	chr2.1:5557794-5557813	MS.gene98721:CDS	35.0%
!	ACTGTTGATGTTGATGGAAA+TGG	+	chr2.1:5557752-5557771	MS.gene98721:CDS	35.0%
!	TGATGTTGATGGAAATGGTT+TGG	+	chr2.1:5557757-5557776	MS.gene98721:CDS	35.0%
	AAGAGGAGGAAGAAGATATG+AGG	+	chr2.1:5557603-5557622	MS.gene98721:CDS	40.0%
	AAGATTGATGTGAACCGAGA+TGG	+	chr2.1:5557521-5557540	MS.gene98721:CDS	40.0%
	AGAGGAGGAAGAAGATATGA+GGG	+	chr2.1:5557604-5557623	MS.gene98721:CDS	40.0%
	AGATGGATGTGTGGATATTG+AGG	+	chr2.1:5557538-5557557	MS.gene98721:CDS	40.0%
	ATAGGGACTGTTGATGTTGA+TGG	+	chr2.1:5557746-5557765	MS.gene98721:CDS	40.0%
	ATTTGACTCAGCTCTTTGTC+AGG	-	chr2.1:5557494-5557513	None:intergenic	40.0%
	CAATATCCACACATCCATCT+CGG	-	chr2.1:5557538-5557557	None:intergenic	40.0%
	GTTTCGTTGGGATTGAAACA+AGG	+	chr2.1:5557695-5557714	MS.gene98721:CDS	40.0%
	TATGAGTGAACGTGATGAAG+AGG	+	chr2.1:5557586-5557605	MS.gene98721:CDS	40.0%
	TTTGACTCAGCTCTTTGTCA+GGG	-	chr2.1:5557493-5557512	None:intergenic	40.0%
!!	TAGCGTTGATGAGTTGAGAT+CGG	+	chr2.1:5557667-5557686	MS.gene98721:CDS	40.0%
!!	TGATGAGTTGAGATCGGTTT+TGG	+	chr2.1:5557673-5557692	MS.gene98721:CDS	40.0%
!!!	AGATCGGTTTTGGTTTCGTT+GGG	+	chr2.1:5557683-5557702	MS.gene98721:CDS	40.0%
	AAGCAAATGATGAAGGGTGG+TGG	+	chr2.1:5557797-5557816	MS.gene98721:CDS	45.0%
	GTGTTTGATCAGAACGGTGA+TGG	+	chr2.1:5557638-5557657	MS.gene98721:CDS	45.0%
!!!	GAGATCGGTTTTGGTTTCGT+TGG	+	chr2.1:5557682-5557701	MS.gene98721:CDS	45.0%
	ATGTTTGACCGCAACGACGA+TGG	+	chr2.1:5557413-5557432	MS.gene98721:CDS	50.0%
	CGTCGTTGCGGTCAAACATT+TGG	-	chr2.1:5557412-5557431	None:intergenic	50.0%
	GAGTGAACGTGATGAAGAGG+AGG	+	chr2.1:5557589-5557608	MS.gene98721:CDS	50.0%
	TGTGAACCGAGATGGATGTG+TGG	+	chr2.1:5557529-5557548	MS.gene98721:CDS	50.0%
	TTATACGGCCATCGTCGTTG+CGG	-	chr2.1:5557424-5557443	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	5557380	5557838	5557380	ID=MS.gene98721
chr2.1	mRNA	5557380	5557838	5557380	ID=MS.gene98721.t1;Parent=MS.gene98721
chr2.1	exon	5557380	5557838	5557380	ID=MS.gene98721.t1.exon1;Parent=MS.gene98721.t1
chr2.1	CDS	5557380	5557838	5557380	ID=cds.MS.gene98721.t1;Parent=MS.gene98721.t1

Gene Sequence

>MS.gene98721

ATGGATCCAAATGAACTCAAACGTGTTTTCCAAATGTTTGACCGCAACGACGATGGCCGTATAACAAAGAAAGAGTTGAATGATTCCTTGGAGAATTTAGGAATCTTCATCCCTGACAAAGAGCTGAGTCAAATGATCGAGAAGATTGATGTGAACCGAGATGGATGTGTGGATATTGAGGAATTTAGAGAGTTGTATGAGTCAATTATGAGTGAACGTGATGAAGAGGAGGAAGAAGATATGAGGGAAGCATTCAACGTGTTTGATCAGAACGGTGATGGATTCATTAGCGTTGATGAGTTGAGATCGGTTTTGGTTTCGTTGGGATTGAAACAAGGAAGAACAGTTGAAGACTGTAAGAAGATGATAGGGACTGTTGATGTTGATGGAAATGGTTTGGTTGATTATAAGGAGTTTAAGCAAATGATGAAGGGTGGTGGATTCACTGCTCTCAGTTAG

Protein sequence

>MS.gene98721.t1

MDPNELKRVFQMFDRNDDGRITKKELNDSLENLGIFIPDKELSQMIEKIDVNRDGCVDIEEFRELYESIMSERDEEEEEDMREAFNVFDQNGDGFISVDELRSVLVSLGLKQGRTVEDCKKMIGTVDVDGNGLVDYKEFKQMMKGGGFTALS