AlfalfaGEDB | MsG0380014011.01

M. sativa cultivar ZhongmuNo.1 / MsG0380014011.01

KEGG: K02886
GO: GO:0003735 GO:0005840 GO:0006412
PFAM: PF03947

Nr:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014011.01.T02	QAU08569.1	93.636	110	7	1	110	22	131	2.45E-65	204
MsG0380014011.01.T06	WP_206630704.1	84.615	39	6	1	39	72	110	1.50E-15	74.3
MsG0380014011.01.T04	QAU08569.1	92.857	98	7	1	98	34	131	2.08E-57	183
MsG0380014011.01.T01	QAU08569.1	93.913	115	7	1	115	17	131	1.00E-68	213
MsG0380014011.01.T05	QAU08569.1	92.391	92	7	1	92	40	131	2.62E-53	173
MsG0380014011.01.T03	QAU08569.1	93.137	102	7	1	102	30	131	3.84E-60	191

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014011.01.T01	A4QKN3	93.913	115	7	1	115	147	261	3.59E-70	214
MsG0380014011.01.T02	A4QKN3	93.636	110	7	1	110	152	261	9.89E-67	205
MsG0380014011.01.T03	A4QKN3	93.137	102	7	1	102	160	261	1.71E-61	191
MsG0380014011.01.T04	A4QJX2	92.857	98	7	1	98	164	261	1.02E-58	184
MsG0380014011.01.T05	A4QKN3	92.391	92	7	1	92	170	261	1.17E-54	173
MsG0380014011.01.T06	A4QJF6	84.615	39	6	1	39	223	261	3.50E-17	74.3

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014011.01.T01	A0A6B7ELL5	93.913	115	7	1	115	17	131	4.79e-69	213
MsG0380014011.01.T01	A0A6M8ZBY1	94.783	115	6	1	115	147	261	1.18e-68	216
MsG0380014011.01.T02	A0A6M8ZBY1	94.545	110	6	1	110	152	261	3.72e-65	207
MsG0380014011.01.T03	A0A6B7ELL5	93.137	102	7	1	102	30	131	1.84e-60	191
MsG0380014011.01.T05	A0A6B7ELL5	92.391	92	7	1	92	40	131	1.25e-53	173
MsG0380014011.01.T06	A0A251VIT6	86.842	38	5	1	38	77	114	7.56e-16	74.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048698.01	MsG0380014011.01	0.823310	1.483623e-53	1.272802e-50
MsG0180002226.01	MsG0380014011.01	0.837542	4.888186e-57	6.370005e-54
MsG0180002435.01	MsG0380014011.01	0.816507	5.336651e-52	3.788451e-49
MsG0380013916.01	MsG0380014011.01	0.837238	5.847218e-57	7.548326e-54
MsG0380013917.01	MsG0380014011.01	0.831562	1.556240e-55	1.695119e-52
MsG0380013918.01	MsG0380014011.01	0.819218	1.303634e-52	9.970404e-50
MsG0380013920.01	MsG0380014011.01	0.864683	1.019076e-64	3.227486e-61
MsG0380013923.01	MsG0380014011.01	0.820911	5.340531e-53	4.281723e-50
MsG0380013931.01	MsG0380014011.01	0.819719	1.002168e-52	7.772780e-50
MsG0380013932.01	MsG0380014011.01	0.846405	2.217465e-59	3.812839e-56
MsG0380013942.01	MsG0380014011.01	0.812000	5.282925e-51	3.319388e-48
MsG0380013944.01	MsG0380014011.01	0.862636	4.404727e-64	1.298758e-60
MsG0380013947.01	MsG0380014011.01	0.809953	1.466650e-50	8.729256e-48
MsG0380013948.01	MsG0380014011.01	0.837171	6.082731e-57	7.836850e-54
MsG0380013949.01	MsG0380014011.01	0.861168	1.240029e-63	3.475983e-60
MsG0380013950.01	MsG0380014011.01	0.828141	1.060117e-54	1.044681e-51
MsG0380013952.01	MsG0380014011.01	0.830527	2.793012e-55	2.950172e-52
MsG0380013959.01	MsG0380014011.01	0.836844	7.374479e-57	9.407542e-54
MsG0380013964.01	MsG0380014011.01	0.824488	7.856858e-54	6.969293e-51
MsG0380013969.01	MsG0380014011.01	0.833220	6.042539e-56	6.913698e-53
MsG0380013972.01	MsG0380014011.01	0.865155	7.247906e-65	2.334628e-61
MsG0380013981.01	MsG0380014011.01	0.862542	4.708627e-64	1.383928e-60
MsG0380013988.01	MsG0380014011.01	0.832411	9.599006e-56	1.072093e-52
MsG0380013995.01	MsG0380014011.01	0.862227	5.881616e-64	1.709952e-60
MsG0380014008.01	MsG0380014011.01	0.876397	1.442591e-68	6.983493e-65
MsG0380014009.01	MsG0380014011.01	0.839838	1.246721e-57	1.742991e-54
MsG0380014011.01	MsG0380014035.01	0.812795	3.542032e-51	2.273163e-48
MsG0380014011.01	MsG0380014036.01	0.858151	1.002849e-62	2.534939e-59
MsG0380014011.01	MsG0380014039.01	0.820197	7.788913e-53	6.122308e-50
MsG0380014011.01	MsG0380014040.01	0.856633	2.819421e-62	6.772096e-59
MsG0380014011.01	MsG0380014041.01	0.841360	4.981671e-58	7.301989e-55
MsG0380014011.01	MsG0380014044.01	0.958181	4.440901e-116	1.611878e-110
MsG0380014011.01	MsG0380014051.01	0.812724	3.671406e-51	2.352032e-48
MsG0380014011.01	MsG0380014055.01	0.836140	1.114090e-56	1.391540e-53
MsG0380014011.01	MsG0380014057.01	0.921005	6.227465e-88	2.174535e-83
MsG0380014011.01	MsG0380017006.01	0.817980	2.488288e-52	1.839158e-49
MsG0380014011.01	MsG0380017007.01	0.824401	8.236851e-54	7.287608e-51
MsG0380014011.01	MsG0580028230.01	0.804199	2.422635e-49	1.241443e-46
MsG0380014011.01	MsG0780040316.01	0.823630	1.249233e-53	1.081532e-50
MsG0380014011.01	MsG0780040317.01	0.805739	1.154388e-49	6.155099e-47
MsG0280007042.01	MsG0380014011.01	0.815274	1.005505e-51	6.901267e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014011.01.T02	MTR_3g035710	94.495	109	6	0	1	109	20	128	9.49e-69	202
MsG0380014011.01.T02	MTR_0002s0800	88.182	110	13	0	1	110	14	123	5.77e-65	196
MsG0380014011.01.T02	MTR_0002s0360	88.182	110	13	0	1	110	14	123	5.77e-65	196
MsG0380014011.01.T02	MTR_3g037420	90.000	110	11	0	1	110	15	124	9.53e-65	192
MsG0380014011.01.T02	MTR_8g102110	94.444	90	5	0	1	90	23	112	9.37e-54	164
MsG0380014011.01.T02	MTR_4g051430	79.412	102	1	1	1	102	280	361	4.73e-46	152
MsG0380014011.01.T02	MTR_2g015360	52.830	106	44	3	1	101	79	183	1.85e-25	94.7
MsG0380014011.01.T02	MTR_0082s0210	92.683	41	3	0	19	59	36	76	5.98e-18	72.4
MsG0380014011.01.T02	MTR_7g076940	41.111	90	46	3	1	83	126	215	4.90e-13	63.5
MsG0380014011.01.T02	MTR_5g021800	40.000	90	47	3	1	83	126	215	3.20e-12	61.2
MsG0380014011.01.T02	MTR_4g127750	93.750	32	2	0	1	32	109	140	8.74e-11	55.8
MsG0380014011.01.T06	MTR_3g037420	84.615	39	6	0	1	39	86	124	1.03e-18	72.8
MsG0380014011.01.T06	MTR_3g035710	84.211	38	6	0	1	38	91	128	3.37e-18	71.6
MsG0380014011.01.T06	MTR_0002s0800	82.051	39	7	0	1	39	85	123	6.44e-18	72.4
MsG0380014011.01.T06	MTR_0002s0360	82.051	39	7	0	1	39	85	123	6.44e-18	72.4
MsG0380014011.01.T06	MTR_4g051430	84.211	38	6	0	1	38	331	368	1.15e-16	70.9
MsG0380014011.01.T04	MTR_3g035710	93.814	97	6	0	1	97	32	128	7.14e-61	182
MsG0380014011.01.T04	MTR_0002s0800	86.735	98	13	0	1	98	26	123	7.43e-57	174
MsG0380014011.01.T04	MTR_0002s0360	86.735	98	13	0	1	98	26	123	7.43e-57	174
MsG0380014011.01.T04	MTR_3g037420	88.776	98	11	0	1	98	27	124	9.34e-57	172
MsG0380014011.01.T04	MTR_8g102110	93.590	78	5	0	1	78	35	112	7.81e-46	143
MsG0380014011.01.T04	MTR_4g051430	76.667	90	1	1	1	90	292	361	3.17e-38	131
MsG0380014011.01.T04	MTR_2g015360	53.571	84	36	1	9	89	100	183	2.60e-22	86.3
MsG0380014011.01.T04	MTR_0082s0210	92.683	41	3	0	7	47	36	76	3.69e-18	72.4
MsG0380014011.01.T04	MTR_7g076940	41.892	74	38	2	3	71	142	215	6.19e-11	57.0
MsG0380014011.01.T01	MTR_3g035710	94.737	114	6	0	1	114	15	128	3.88e-72	211
MsG0380014011.01.T01	MTR_3g037420	90.435	115	11	0	1	115	10	124	3.38e-68	201
MsG0380014011.01.T01	MTR_0002s0800	87.826	115	14	0	1	115	9	123	4.81e-68	204
MsG0380014011.01.T01	MTR_0002s0360	87.826	115	14	0	1	115	9	123	4.81e-68	204
MsG0380014011.01.T01	MTR_8g102110	94.737	95	5	0	1	95	18	112	2.39e-57	173
MsG0380014011.01.T01	MTR_4g051430	80.374	107	1	1	1	107	275	361	1.35e-49	162
MsG0380014011.01.T01	MTR_2g015360	53.153	111	46	3	1	106	74	183	9.08e-28	100
MsG0380014011.01.T01	MTR_0082s0210	92.683	41	3	0	24	64	36	76	7.64e-18	72.0
MsG0380014011.01.T01	MTR_4g127750	94.444	36	2	0	2	37	105	140	6.89e-14	64.3
MsG0380014011.01.T01	MTR_7g076940	41.053	95	49	3	1	88	121	215	1.47e-13	65.1
MsG0380014011.01.T01	MTR_4g047905	96.970	33	1	0	1	33	15	47	5.79e-13	60.5
MsG0380014011.01.T01	MTR_5g021800	40.000	95	50	3	1	88	121	215	7.60e-13	63.2
MsG0380014011.01.T05	MTR_3g035710	93.407	91	6	0	1	91	38	128	7.09e-57	172
MsG0380014011.01.T05	MTR_3g037420	89.130	92	10	0	1	92	33	124	8.41e-54	164
MsG0380014011.01.T05	MTR_0002s0800	85.870	92	13	0	1	92	32	123	7.82e-53	164
MsG0380014011.01.T05	MTR_0002s0360	85.870	92	13	0	1	92	32	123	7.82e-53	164
MsG0380014011.01.T05	MTR_8g102110	93.056	72	5	0	1	72	41	112	7.67e-42	133
MsG0380014011.01.T05	MTR_4g051430	75.000	84	1	1	1	84	298	361	3.00e-34	120
MsG0380014011.01.T05	MTR_2g015360	53.571	84	36	1	3	83	100	183	2.18e-22	86.3
MsG0380014011.01.T05	MTR_0082s0210	92.683	41	3	0	1	41	36	76	3.17e-18	72.4
MsG0380014011.01.T03	MTR_3g035710	94.059	101	6	0	1	101	28	128	1.34e-63	189
MsG0380014011.01.T03	MTR_0002s0800	87.255	102	13	0	1	102	22	123	1.12e-59	182
MsG0380014011.01.T03	MTR_0002s0360	87.255	102	13	0	1	102	22	123	1.12e-59	182
MsG0380014011.01.T03	MTR_3g037420	89.216	102	11	0	1	102	23	124	1.69e-59	179
MsG0380014011.01.T03	MTR_8g102110	93.902	82	5	0	1	82	31	112	1.65e-48	150
MsG0380014011.01.T03	MTR_4g051430	77.660	94	1	1	1	94	288	361	8.31e-41	138
MsG0380014011.01.T03	MTR_2g015360	52.632	95	40	2	4	93	89	183	7.37e-23	87.8
MsG0380014011.01.T03	MTR_0082s0210	92.683	41	3	0	11	51	36	76	3.94e-18	72.4
MsG0380014011.01.T03	MTR_7g076940	41.892	74	38	2	7	75	142	215	6.26e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014011.01.T02	ATCG00830	92.727	110	8	0	1	110	152	261	2.23e-66	201
MsG0380014011.01.T02	ATCG01310	92.727	110	8	0	1	110	152	261	2.23e-66	201
MsG0380014011.01.T02	AT2G44065	48.571	105	50	2	1	101	87	191	1.15e-24	93.2
MsG0380014011.01.T02	AT2G44065	48.571	105	50	2	1	101	87	191	1.15e-24	93.2
MsG0380014011.01.T02	AT2G44065	48.571	105	50	2	1	101	87	191	1.15e-24	93.2
MsG0380014011.01.T02	AT3G51190	47.778	90	40	3	1	83	127	216	4.41e-15	68.9
MsG0380014011.01.T02	AT2G18020	45.556	90	42	3	1	83	126	215	9.13e-14	65.5
MsG0380014011.01.T02	AT4G36130	42.222	90	45	3	1	83	126	215	3.56e-13	63.9
MsG0380014011.01.T06	ATCG00830	84.615	39	6	0	1	39	223	261	8.37e-18	73.2
MsG0380014011.01.T06	ATCG01310	84.615	39	6	0	1	39	223	261	8.37e-18	73.2
MsG0380014011.01.T04	ATCG00830	91.837	98	8	0	1	98	164	261	1.97e-58	181
MsG0380014011.01.T04	ATCG01310	91.837	98	8	0	1	98	164	261	1.97e-58	181
MsG0380014011.01.T04	AT2G44065	52.941	85	35	2	9	89	108	191	1.11e-21	85.1
MsG0380014011.01.T04	AT2G44065	52.941	85	35	2	9	89	108	191	1.11e-21	85.1
MsG0380014011.01.T04	AT2G44065	52.941	85	35	2	9	89	108	191	1.11e-21	85.1
MsG0380014011.01.T04	AT3G51190	45.946	74	35	2	3	71	143	216	2.60e-12	60.8
MsG0380014011.01.T04	AT4G36130	41.892	74	38	2	3	71	142	215	9.55e-11	56.6
MsG0380014011.01.T01	ATCG00830	92.174	115	9	0	1	115	147	261	2.34e-69	209
MsG0380014011.01.T01	ATCG01310	92.174	115	9	0	1	115	147	261	2.34e-69	209
MsG0380014011.01.T01	AT2G44065	49.550	111	50	3	1	106	82	191	3.32e-26	97.4
MsG0380014011.01.T01	AT2G44065	49.550	111	50	3	1	106	82	191	3.32e-26	97.4
MsG0380014011.01.T01	AT2G44065	49.550	111	50	3	1	106	82	191	3.32e-26	97.4
MsG0380014011.01.T01	AT3G51190	47.368	95	43	3	1	88	122	216	1.01e-15	70.9
MsG0380014011.01.T01	AT2G18020	45.263	95	45	3	1	88	121	215	2.78e-14	67.0
MsG0380014011.01.T01	AT4G36130	42.105	95	48	3	1	88	121	215	1.23e-13	65.1
MsG0380014011.01.T05	ATCG00830	91.304	92	8	0	1	92	170	261	3.33e-54	169
MsG0380014011.01.T05	ATCG01310	91.304	92	8	0	1	92	170	261	3.33e-54	169
MsG0380014011.01.T05	AT2G44065	51.190	84	38	1	3	83	108	191	8.80e-22	85.1
MsG0380014011.01.T05	AT2G44065	51.190	84	38	1	3	83	108	191	8.80e-22	85.1
MsG0380014011.01.T05	AT2G44065	51.190	84	38	1	3	83	108	191	8.80e-22	85.1
MsG0380014011.01.T05	AT3G51190	48.529	68	30	2	3	65	149	216	9.59e-12	59.3
MsG0380014011.01.T03	ATCG00830	92.157	102	8	0	1	102	160	261	3.98e-61	187
MsG0380014011.01.T03	ATCG01310	92.157	102	8	0	1	102	160	261	3.98e-61	187
MsG0380014011.01.T03	AT2G44065	48.454	97	46	2	1	93	95	191	6.59e-22	85.9
MsG0380014011.01.T03	AT2G44065	48.454	97	46	2	1	93	95	191	6.59e-22	85.9
MsG0380014011.01.T03	AT2G44065	48.454	97	46	2	1	93	95	191	6.59e-22	85.9
MsG0380014011.01.T03	AT3G51190	45.946	74	35	2	7	75	143	216	2.69e-12	61.2
MsG0380014011.01.T03	AT4G36130	41.892	74	38	2	7	75	142	215	9.56e-11	57.0

Find 45 sgRNAs with CRISPR-Local

Find 55 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCACCATGTGGATGGTCTAC+AGG	0.374827	3:+48641847	None:intergenic
GGTTATTTCTATGTTATGTA+TGG	0.395638	3:+48642108	None:intergenic
GTTATGTATGGCCGTGCCTA+AGG	0.403150	3:+48642120	None:intergenic
GCAACATTAAAATTACCTTC+TGG	0.409057	3:-48642012	MsG0380014011.01.T01:CDS
TCTACTTCTTCTTCCAGTGC+AGG	0.432752	3:+48641769	None:intergenic
GATTGCAAAAGAGGGGAAAT+CGG	0.451584	3:-48642034	MsG0380014011.01.T01:CDS
TAGAAATAACCCCTTGGAAA+GGG	0.490320	3:-48642096	MsG0380014011.01.T07:CDS
CATCCACATGGTGGTGGTGA+AGG	0.493903	3:-48641838	MsG0380014011.01.T01:CDS
AGCGAAACTGATTGCAAAAG+AGG	0.500228	3:-48642043	MsG0380014011.01.T01:CDS
ACCTAACCAACGTTTAGCTC+CGG	0.500488	3:+48641903	None:intergenic
GGATAACCCCAAGGAGTTGA+GGG	0.501467	3:+48641790	None:intergenic
CTAATTGTCCACCCTTTCCA+AGG	0.509178	3:+48642085	None:intergenic
TCCTTGGGGTTATCCTGCAC+TGG	0.510535	3:-48641782	MsG0380014011.01.T01:CDS
ACATGGTGGTGGTGAAGGGA+GGG	0.520822	3:-48641833	MsG0380014011.01.T01:CDS
GCCGGAGCTAAACGTTGGTT+AGG	0.522087	3:-48641904	MsG0380014011.01.T01:CDS
CACATGGTGGTGGTGAAGGG+AGG	0.525514	3:-48641834	MsG0380014011.01.T01:CDS
CTTCACCACCACCATGTGGA+TGG	0.526187	3:+48641839	None:intergenic
ATAACTACTCCTCTTACTAC+AGG	0.526817	3:+48641874	None:intergenic
CACCATGTGGATGGTCTACA+GGG	0.532724	3:+48641848	None:intergenic
TAATTGTCCACCCTTTCCAA+GGG	0.533664	3:+48642086	None:intergenic
GGTAAGCGTCCTGTAGTAAG+AGG	0.536554	3:-48641883	MsG0380014011.01.T01:CDS
TCAGCAACAGTAGGACAAGT+AGG	0.541112	3:-48641961	MsG0380014011.01.T01:CDS
GGTGAAGGGAGGGCCCCGAT+TGG	0.541114	3:-48641823	MsG0380014011.01.T01:CDS
GGACAATTAGCTAGAGCAGC+TGG	0.543739	3:-48642072	MsG0380014011.01.T01:CDS
ATCCACATGGTGGTGGTGAA+GGG	0.544348	3:-48641837	MsG0380014011.01.T01:CDS
TTATGTATGGCCGTGCCTAA+GGG	0.546055	3:+48642121	None:intergenic
ATAGAAATAACCCCTTGGAA+AGG	0.550133	3:-48642097	MsG0380014011.01.T07:CDS
GTAGGACAAGTAGGGAATGT+TGG	0.550877	3:-48641952	MsG0380014011.01.T01:CDS
GCGAAACTGATTGCAAAAGA+GGG	0.554830	3:-48642042	MsG0380014011.01.T01:CDS
ATTAAAATTACCTTCTGGAG+AGG	0.560627	3:-48642007	MsG0380014011.01.T01:CDS
AGGATAACCCCAAGGAGTTG+AGG	0.567413	3:+48641789	None:intergenic
AACCGATATGCCCTTAGGCA+CGG	0.569174	3:-48642131	None:intergenic
CTCCCTTCACCACCACCATG+TGG	0.585580	3:+48641835	None:intergenic
CAGCAACAGTAGGACAAGTA+GGG	0.586255	3:-48641960	MsG0380014011.01.T01:CDS
AAATAACCCCTTGGAAAGGG+TGG	0.586635	3:-48642093	MsG0380014011.01.T07:CDS
ATAACATAGAAATAACCCCT+TGG	0.608026	3:-48642102	MsG0380014011.01.T07:CDS
ATCAAACGGACCTCTCCAGA+AGG	0.618237	3:+48641997	None:intergenic
ACTTCAACCGATATGCCCTT+AGG	0.622846	3:-48642136	None:intergenic
GTAGACCATCCACATGGTGG+TGG	0.631075	3:-48641844	MsG0380014011.01.T01:CDS
TCCAGTGCAGGATAACCCCA+AGG	0.646961	3:+48641781	None:intergenic
CGAAACTGATTGCAAAAGAG+GGG	0.648445	3:-48642041	MsG0380014011.01.T01:CDS
GCAGAGCCGGAGCTAAACGT+TGG	0.663271	3:-48641909	MsG0380014011.01.T01:CDS
AATTGTCCACCCTTTCCAAG+GGG	0.687634	3:+48642087	None:intergenic
AACCCTGTAGACCATCCACA+TGG	0.689961	3:-48641850	MsG0380014011.01.T01:CDS
CCTGTAGACCATCCACATGG+TGG	0.727826	3:-48641847	MsG0380014011.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGCAGTTTTTTGATATCAAA+CGG	+	Chr3:48641897-48641916	None:intergenic	25.0%
!!!	GGTTATTTCTATGTTATGTA+TGG	+	Chr3:48641772-48641791	None:intergenic	25.0%
	ATAACATAGAAATAACCCCT+TGG	-	Chr3:48641775-48641794	MsG0380014011.01.T01:CDS	30.0%
	GCAACATTAAAATTACCTTC+TGG	-	Chr3:48641865-48641884	MsG0380014011.01.T01:CDS	30.0%
	GGAGTAAACCAAAAAAGTTT+GGG	-	Chr3:48641946-48641965	MsG0380014011.01.T01:CDS	30.0%
	TGGAGTAAACCAAAAAAGTT+TGG	-	Chr3:48641945-48641964	MsG0380014011.01.T01:CDS	30.0%
!	ATTAAAATTACCTTCTGGAG+AGG	-	Chr3:48641870-48641889	MsG0380014011.01.T01:CDS	30.0%
	AAAAAAACCCTCAACTCCTT+GGG	-	Chr3:48642080-48642099	MsG0380014011.01.T01:CDS	35.0%
	ATAACTACTCCTCTTACTAC+AGG	+	Chr3:48642006-48642025	None:intergenic	35.0%
	ATAGAAATAACCCCTTGGAA+AGG	-	Chr3:48641780-48641799	MsG0380014011.01.T01:CDS	35.0%
	TAGAAATAACCCCTTGGAAA+GGG	-	Chr3:48641781-48641800	MsG0380014011.01.T01:CDS	35.0%
!!!	AGGGTTTTTTTCTACCAATC+GGG	+	Chr3:48642071-48642090	None:intergenic	35.0%
!!!	GAGGGTTTTTTTCTACCAAT+CGG	+	Chr3:48642072-48642091	None:intergenic	35.0%
	AAAAAACCCTCAACTCCTTG+GGG	-	Chr3:48642081-48642100	MsG0380014011.01.T01:CDS	40.0%
	AAAAACTGCTCAGCAACAGT+AGG	-	Chr3:48641907-48641926	MsG0380014011.01.T01:CDS	40.0%
	AGCGAAACTGATTGCAAAAG+AGG	-	Chr3:48641834-48641853	MsG0380014011.01.T01:CDS	40.0%
	CGAAACTGATTGCAAAAGAG+GGG	-	Chr3:48641836-48641855	MsG0380014011.01.T01:CDS	40.0%
	GAAAAAAACCCTCAACTCCT+TGG	-	Chr3:48642079-48642098	MsG0380014011.01.T01:CDS	40.0%
	GATTGCAAAAGAGGGGAAAT+CGG	-	Chr3:48641843-48641862	MsG0380014011.01.T01:CDS	40.0%
	GCGAAACTGATTGCAAAAGA+GGG	-	Chr3:48641835-48641854	MsG0380014011.01.T01:CDS	40.0%
	TAATTGTCCACCCTTTCCAA+GGG	+	Chr3:48641794-48641813	None:intergenic	40.0%
!!!	GGGTTTTTTTCTACCAATCG+GGG	+	Chr3:48642070-48642089	None:intergenic	40.0%
	AAATAACCCCTTGGAAAGGG+TGG	-	Chr3:48641784-48641803	MsG0380014011.01.T01:CDS	45.0%
	AATTGTCCACCCTTTCCAAG+GGG	+	Chr3:48641793-48641812	None:intergenic	45.0%
	CAAAAAAGTTTGGGCAGAGC+CGG	-	Chr3:48641955-48641974	MsG0380014011.01.T01:CDS	45.0%
	CAGCAACAGTAGGACAAGTA+GGG	-	Chr3:48641917-48641936	MsG0380014011.01.T01:CDS	45.0%
	CTAATTGTCCACCCTTTCCA+AGG	+	Chr3:48641795-48641814	None:intergenic	45.0%
	GTAGGACAAGTAGGGAATGT+TGG	-	Chr3:48641925-48641944	MsG0380014011.01.T01:CDS	45.0%
	TCAGCAACAGTAGGACAAGT+AGG	-	Chr3:48641916-48641935	MsG0380014011.01.T01:CDS	45.0%
	TCTACTTCTTCTTCCAGTGC+AGG	+	Chr3:48642111-48642130	None:intergenic	45.0%
	TTATGTATGGCCGTGCCTAA+GGG	+	Chr3:48641759-48641778	None:intergenic	45.0%
!	ACCTAACCAACGTTTAGCTC+CGG	+	Chr3:48641977-48641996	None:intergenic	45.0%
	AACCCTGTAGACCATCCACA+TGG	-	Chr3:48642027-48642046	MsG0380014011.01.T01:CDS	50.0%
	AGGATAACCCCAAGGAGTTG+AGG	+	Chr3:48642091-48642110	None:intergenic	50.0%
	ATCAAACGGACCTCTCCAGA+AGG	+	Chr3:48641883-48641902	None:intergenic	50.0%
	CACCATGTGGATGGTCTACA+GGG	+	Chr3:48642032-48642051	None:intergenic	50.0%
	GGACAATTAGCTAGAGCAGC+TGG	-	Chr3:48641805-48641824	MsG0380014011.01.T01:CDS	50.0%
	GGATAACCCCAAGGAGTTGA+GGG	+	Chr3:48642090-48642109	None:intergenic	50.0%
	GGTAAGCGTCCTGTAGTAAG+AGG	-	Chr3:48641994-48642013	MsG0380014011.01.T01:CDS	50.0%
	GTTATGTATGGCCGTGCCTA+AGG	+	Chr3:48641760-48641779	None:intergenic	50.0%
!!	ATCCACATGGTGGTGGTGAA+GGG	-	Chr3:48642040-48642059	MsG0380014011.01.T01:CDS	50.0%
!!!	CGGCTCTGCCCAAACTTTTT+TGG	+	Chr3:48641957-48641976	None:intergenic	50.0%
	CCACCATGTGGATGGTCTAC+AGG	+	Chr3:48642033-48642052	None:intergenic	55.0%
	CCTGTAGACCATCCACATGG+TGG	-	Chr3:48642030-48642049	MsG0380014011.01.T01:CDS	55.0%
	CTTCACCACCACCATGTGGA+TGG	+	Chr3:48642041-48642060	None:intergenic	55.0%
	GTAGACCATCCACATGGTGG+TGG	-	Chr3:48642033-48642052	MsG0380014011.01.T01:CDS	55.0%
	TCCAGTGCAGGATAACCCCA+AGG	+	Chr3:48642099-48642118	None:intergenic	55.0%
	TCCTTGGGGTTATCCTGCAC+TGG	-	Chr3:48642095-48642114	MsG0380014011.01.T07:CDS	55.0%
!	GCCGGAGCTAAACGTTGGTT+AGG	-	Chr3:48641973-48641992	MsG0380014011.01.T01:CDS	55.0%
!!	ACATGGTGGTGGTGAAGGGA+GGG	-	Chr3:48642044-48642063	MsG0380014011.01.T01:CDS	55.0%
!!	CATCCACATGGTGGTGGTGA+AGG	-	Chr3:48642039-48642058	MsG0380014011.01.T01:CDS	55.0%
	CTCCCTTCACCACCACCATG+TGG	+	Chr3:48642045-48642064	None:intergenic	60.0%
	GCAGAGCCGGAGCTAAACGT+TGG	-	Chr3:48641968-48641987	MsG0380014011.01.T01:CDS	60.0%
!!	CACATGGTGGTGGTGAAGGG+AGG	-	Chr3:48642043-48642062	MsG0380014011.01.T01:CDS	60.0%
	GGTGAAGGGAGGGCCCCGAT+TGG	-	Chr3:48642054-48642073	MsG0380014011.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	48641753	48642146	48641753	ID=MsG0380014011.01;Name=MsG0380014011.01
Chr3	mRNA	48641753	48642103	48641753	ID=MsG0380014011.01.T01;Parent=MsG0380014011.01;Name=MsG0380014011.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|116
Chr3	exon	48641753	48642103	48641753	ID=MsG0380014011.01.T01:exon:9370;Parent=MsG0380014011.01.T01
Chr3	CDS	48641753	48642103	48641753	ID=MsG0380014011.01.T01:cds;Parent=MsG0380014011.01.T01
Chr3	mRNA	48641753	48642088	48641753	ID=MsG0380014011.01.T02;Parent=MsG0380014011.01;Name=MsG0380014011.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|111
Chr3	exon	48641753	48642088	48641753	ID=MsG0380014011.01.T02:exon:9371;Parent=MsG0380014011.01.T02
Chr3	CDS	48641753	48642088	48641753	ID=MsG0380014011.01.T02:cds;Parent=MsG0380014011.01.T02
Chr3	mRNA	48641753	48642064	48641753	ID=MsG0380014011.01.T03;Parent=MsG0380014011.01;Name=MsG0380014011.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|103
Chr3	exon	48641753	48642064	48641753	ID=MsG0380014011.01.T03:exon:9372;Parent=MsG0380014011.01.T03
Chr3	CDS	48641753	48642064	48641753	ID=MsG0380014011.01.T03:cds;Parent=MsG0380014011.01.T03
Chr3	mRNA	48641753	48642052	48641753	ID=MsG0380014011.01.T04;Parent=MsG0380014011.01;Name=MsG0380014011.01.T04;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|99
Chr3	exon	48641753	48642052	48641753	ID=MsG0380014011.01.T04:exon:9373;Parent=MsG0380014011.01.T04
Chr3	CDS	48641753	48642052	48641753	ID=MsG0380014011.01.T04:cds;Parent=MsG0380014011.01.T04
Chr3	mRNA	48641753	48642034	48641753	ID=MsG0380014011.01.T05;Parent=MsG0380014011.01;Name=MsG0380014011.01.T05;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|93
Chr3	exon	48641753	48642034	48641753	ID=MsG0380014011.01.T05:exon:9374;Parent=MsG0380014011.01.T05
Chr3	CDS	48641753	48642034	48641753	ID=MsG0380014011.01.T05:cds;Parent=MsG0380014011.01.T05
Chr3	mRNA	48641753	48641875	48641753	ID=MsG0380014011.01.T06;Parent=MsG0380014011.01;Name=MsG0380014011.01.T06;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|40
Chr3	exon	48641753	48641875	48641753	ID=MsG0380014011.01.T06:exon:9375;Parent=MsG0380014011.01.T06
Chr3	CDS	48641753	48641875	48641753	ID=MsG0380014011.01.T06:cds;Parent=MsG0380014011.01.T06
Chr3	mRNA	48642081	48642146	48642081	ID=MsG0380014011.01.T07;Parent=MsG0380014011.01;Name=MsG0380014011.01.T07;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|21
Chr3	exon	48642081	48642146	48642081	ID=MsG0380014011.01.T07:exon:9376;Parent=MsG0380014011.01.T07
Chr3	CDS	48642081	48642146	48642081	ID=MsG0380014011.01.T07:cds;Parent=MsG0380014011.01.T07

Gene Sequence

>MsG0380014011.01.T02

TTAGCTAGAGCAGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTCTGGAGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTGGAAGAAGAAGTAGAAAAAAGAAAAATATAG

>MsG0380014011.01.T06

ATGAACCCTGTAGACCATCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTGGAAGAAGAAGTAGAAAAAAGAAAAATATAG

>MsG0380014011.01.T04

GCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTCTGGAGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTGGAAGAAGAAGTAGAAAAAAGAAAAATATAG

>MsG0380014011.01.T07

ATGCCCTTAGGCACGGCCATACATAACATAGAAATAACCCCTTGGAAAGGGTGGACAATTAGCTAG

>MsG0380014011.01.T01

GGAAAGGGTGGACAATTAGCTAGAGCAGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTCTGGAGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTGGAAGAAGAAGTAGAAAAAAGAAAAATATAG

>MsG0380014011.01.T05

GCAACATTAAAATTACCTTCTGGAGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTGGAAGAAGAAGTAGAAAAAAGAAAAATATAG

>MsG0380014011.01.T03

GCGAAACTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTCTGGAGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTGGAAGAAGAAGTAGAAAAAAGAAAAATATAG

Protein sequence

>MsG0380014011.01.T02

LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALEEEVEKRKI*

>MsG0380014011.01.T06

MNPVDHPHGGGEGRAPIGRKKPSTPWGYPALEEEVEKRKI*

>MsG0380014011.01.T04

AKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALEEEVEKRKI*

>MsG0380014011.01.T07

MPLGTAIHNIEITPWKGWTIS*

>MsG0380014011.01.T01

GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALEEEVEKRKI*

>MsG0380014011.01.T05

ATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALEEEVEKRKI*

>MsG0380014011.01.T03

AKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALEEEVEKRKI*