Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013944.01.T01 | QRZ59404.1 | 100 | 119 | 0 | 0 | 1 | 119 | 18 | 136 | 2.01E-79 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013944.01.T01 | B5LMR0 | 92.437 | 119 | 9 | 0 | 1 | 119 | 17 | 135 | 7.02E-77 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013944.01.T01 | A0A895KS84 | 100.000 | 119 | 0 | 0 | 1 | 119 | 18 | 136 | 9.62e-80 | 239 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048690.01 | MsG0380013944.01 | 0.825128 | 5.550172e-54 | 5.014532e-51 |
| MsG0080048692.01 | MsG0380013944.01 | 0.890842 | 6.834633e-74 | 5.844492e-70 |
| MsG0080048693.01 | MsG0380013944.01 | 0.830701 | 2.531748e-55 | 2.688191e-52 |
| MsG0080048698.01 | MsG0380013944.01 | 0.916876 | 1.049906e-85 | 2.947209e-81 |
| MsG0080048699.01 | MsG0380013944.01 | 0.927899 | 6.172102e-92 | 3.159136e-87 |
| MsG0080049076.01 | MsG0380013944.01 | 0.824331 | 8.550909e-54 | 7.550566e-51 |
| MsG0180002226.01 | MsG0380013944.01 | 0.837771 | 4.268684e-57 | 5.602905e-54 |
| MsG0180002435.01 | MsG0380013944.01 | 0.816920 | 4.312046e-52 | 3.096013e-49 |
| MsG0180003624.01 | MsG0380013944.01 | 0.814567 | 1.442445e-51 | 9.712724e-49 |
| MsG0180004435.01 | MsG0380013944.01 | 0.828547 | 8.463265e-55 | 8.438880e-52 |
| MsG0280010695.01 | MsG0380013944.01 | 0.815835 | 7.541788e-52 | 5.256336e-49 |
| MsG0380013448.01 | MsG0380013944.01 | 0.848147 | 7.378176e-60 | 1.341103e-56 |
| MsG0380013888.01 | MsG0380013944.01 | 0.873390 | 1.526225e-67 | 6.611799e-64 |
| MsG0380013916.01 | MsG0380013944.01 | 0.883193 | 5.519621e-71 | 3.464139e-67 |
| MsG0380013917.01 | MsG0380013944.01 | 0.893590 | 5.456624e-75 | 5.231413e-71 |
| MsG0380013918.01 | MsG0380013944.01 | 0.843005 | 1.827682e-58 | 2.820403e-55 |
| MsG0380013920.01 | MsG0380013944.01 | 0.895537 | 8.725914e-76 | 9.092481e-72 |
| MsG0380013923.01 | MsG0380013944.01 | 0.948738 | 5.191777e-107 | 9.875526e-102 |
| MsG0380013926.01 | MsG0380013944.01 | 0.898428 | 5.358540e-77 | 6.330384e-73 |
| MsG0380013929.01 | MsG0380013944.01 | 0.884322 | 2.117575e-71 | 1.390931e-67 |
| MsG0380013931.01 | MsG0380013944.01 | 0.915274 | 7.149322e-85 | 1.852957e-80 |
| MsG0380013932.01 | MsG0380013944.01 | 0.859202 | 4.867171e-63 | 1.275101e-59 |
| MsG0380013940.01 | MsG0380013944.01 | 0.850762 | 1.376983e-60 | 2.726105e-57 |
| MsG0380013941.01 | MsG0380013944.01 | 0.908748 | 1.217351e-81 | 2.292997e-77 |
| MsG0380013942.01 | MsG0380013944.01 | 0.933140 | 2.954656e-95 | 2.063123e-90 |
| MsG0380013943.01 | MsG0380013944.01 | 0.848658 | 5.327254e-60 | 9.846346e-57 |
| MsG0380013944.01 | MsG0380013945.01 | 0.852599 | 4.153078e-61 | 8.722794e-58 |
| MsG0380013944.01 | MsG0380013948.01 | 0.877866 | 4.455082e-69 | 2.276216e-65 |
| MsG0380013944.01 | MsG0380013949.01 | 0.801507 | 8.716574e-49 | 4.169971e-46 |
| MsG0380013944.01 | MsG0380013950.01 | 0.811635 | 6.344370e-51 | 3.947402e-48 |
| MsG0380013944.01 | MsG0380013951.01 | 0.937779 | 1.988222e-98 | 1.838476e-93 |
| MsG0380013944.01 | MsG0380013952.01 | 0.909886 | 3.467118e-82 | 6.894355e-78 |
| MsG0380013944.01 | MsG0380013953.01 | 0.841139 | 5.694194e-58 | 8.289033e-55 |
| MsG0380013944.01 | MsG0380013957.01 | 0.852282 | 5.115074e-61 | 1.063620e-57 |
| MsG0380013944.01 | MsG0380013959.01 | 0.859428 | 4.165145e-63 | 1.099689e-59 |
| MsG0380013944.01 | MsG0380013961.01 | 0.845774 | 3.293160e-59 | 5.548293e-56 |
| MsG0380013944.01 | MsG0380013962.01 | 0.854878 | 9.175408e-62 | 2.079259e-58 |
| MsG0380013944.01 | MsG0380013964.01 | 0.809441 | 1.889601e-50 | 1.109527e-47 |
| MsG0380013944.01 | MsG0380013966.01 | 0.920644 | 9.857427e-88 | 3.380934e-83 |
| MsG0380013944.01 | MsG0380013967.01 | 0.853042 | 3.103706e-61 | 6.617256e-58 |
| MsG0380013944.01 | MsG0380013968.01 | 0.935025 | 1.620720e-96 | 1.274506e-91 |
| MsG0380013944.01 | MsG0380013969.01 | 0.909627 | 4.619381e-82 | 9.072840e-78 |
| MsG0380013944.01 | MsG0380013971.01 | 0.833523 | 5.079635e-56 | 5.864898e-53 |
| MsG0380013944.01 | MsG0380013972.01 | 0.914046 | 3.031586e-84 | 7.387466e-80 |
| MsG0380013944.01 | MsG0380013977.01 | 0.855320 | 6.827492e-62 | 1.570308e-58 |
| MsG0380013944.01 | MsG0380013981.01 | 0.905147 | 5.835624e-80 | 9.316873e-76 |
| MsG0380013944.01 | MsG0380013983.01 | 0.825889 | 3.664096e-54 | 3.383151e-51 |
| MsG0380013944.01 | MsG0380013995.01 | 0.916677 | 1.335333e-85 | 3.711197e-81 |
| MsG0380013944.01 | MsG0380013999.01 | 0.808663 | 2.772791e-50 | 1.594684e-47 |
| MsG0380013944.01 | MsG0380014004.01 | 0.823727 | 1.185321e-53 | 1.029137e-50 |
| MsG0380013944.01 | MsG0380014005.01 | 0.854027 | 1.617702e-61 | 3.564869e-58 |
| MsG0380013944.01 | MsG0380014006.01 | 0.842213 | 2.966352e-58 | 4.465711e-55 |
| MsG0380013944.01 | MsG0380014008.01 | 0.971602 | 2.013186e-133 | 2.214594e-127 |
| MsG0380013944.01 | MsG0380014009.01 | 0.809221 | 2.105925e-50 | 1.229358e-47 |
| MsG0380013944.01 | MsG0380014011.01 | 0.862636 | 4.404727e-64 | 1.298758e-60 |
| MsG0380013944.01 | MsG0380014017.01 | 0.809747 | 1.624053e-50 | 9.614420e-48 |
| MsG0380013944.01 | MsG0380014018.01 | 0.920090 | 1.986334e-87 | 6.605400e-83 |
| MsG0380013944.01 | MsG0380014020.01 | 0.801903 | 7.226845e-49 | 3.492234e-46 |
| MsG0380013944.01 | MsG0380014023.01 | 0.884404 | 1.973938e-71 | 1.300440e-67 |
| MsG0380013944.01 | MsG0380014026.01 | 0.903213 | 4.374623e-79 | 6.411117e-75 |
| MsG0380013944.01 | MsG0380014027.01 | 0.816468 | 5.446389e-52 | 3.862183e-49 |
| MsG0380013944.01 | MsG0380014032.01 | 0.853147 | 2.895820e-61 | 6.195502e-58 |
| MsG0380013944.01 | MsG0380014033.01 | 0.890645 | 8.170879e-74 | 6.930923e-70 |
| MsG0380013944.01 | MsG0380014034.01 | 0.831792 | 1.365421e-55 | 1.497606e-52 |
| MsG0380013944.01 | MsG0380014036.01 | 0.870662 | 1.232037e-66 | 4.830627e-63 |
| MsG0380013944.01 | MsG0380014039.01 | 0.967648 | 1.440614e-127 | 1.111656e-121 |
| MsG0380013944.01 | MsG0380014040.01 | 0.987998 | 2.509759e-172 | 1.410085e-165 |
| MsG0380013944.01 | MsG0380014041.01 | 0.817385 | 3.389063e-52 | 2.464641e-49 |
| MsG0380013944.01 | MsG0380014044.01 | 0.889721 | 1.879476e-73 | 1.534135e-69 |
| MsG0380013944.01 | MsG0380014046.01 | 0.817873 | 2.630508e-52 | 1.938683e-49 |
| MsG0380013944.01 | MsG0380014051.01 | 0.910153 | 2.574760e-82 | 5.188808e-78 |
| MsG0380013944.01 | MsG0380014054.01 | 0.829814 | 4.170267e-55 | 4.315984e-52 |
| MsG0380013944.01 | MsG0380014055.01 | 0.807188 | 5.710945e-50 | 3.160277e-47 |
| MsG0380013944.01 | MsG0380014057.01 | 0.936587 | 1.367416e-97 | 1.180154e-92 |
| MsG0380013944.01 | MsG0380015697.01 | 0.811171 | 7.999614e-51 | 4.916963e-48 |
| MsG0380013944.01 | MsG0380017007.01 | 0.945432 | 3.088709e-104 | 4.726062e-99 |
| MsG0380013944.01 | MsG0480018296.01 | 0.896561 | 3.276740e-76 | 3.564132e-72 |
| MsG0380013944.01 | MsG0480020052.01 | 0.813024 | 3.154722e-51 | 2.037103e-48 |
| MsG0380013944.01 | MsG0480023810.01 | -0.823403 | 1.411450e-53 | 1.213981e-50 |
| MsG0380013944.01 | MsG0580024570.01 | 0.812612 | 3.884084e-51 | 2.480929e-48 |
| MsG0380013944.01 | MsG0580027677.01 | 0.846248 | 2.447584e-59 | 4.186653e-56 |
| MsG0380013944.01 | MsG0580029583.01 | -0.806424 | 8.280149e-50 | 4.492681e-47 |
| MsG0380013944.01 | MsG0780038197.01 | 0.820799 | 5.666015e-53 | 4.528354e-50 |
| MsG0380013944.01 | MsG0780040316.01 | 0.855350 | 6.693361e-62 | 1.541038e-58 |
| MsG0380013944.01 | MsG0880045630.01 | 0.821902 | 3.153768e-53 | 2.599701e-50 |
| MsG0280006475.01 | MsG0380013944.01 | 0.808982 | 2.370219e-50 | 1.374728e-47 |
| MsG0280009733.01 | MsG0380013944.01 | 0.812581 | 3.944165e-51 | 2.517281e-48 |
| MsG0280009971.01 | MsG0380013944.01 | -0.844408 | 7.699433e-59 | 1.241800e-55 |
| MsG0280010140.01 | MsG0380013944.01 | 0.829817 | 4.162630e-55 | 4.308572e-52 |
| MsG0280010145.01 | MsG0380013944.01 | 0.932367 | 9.475968e-95 | 6.325632e-90 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013944.01.T01 | MTR_4g034750 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.83e-83 | 239 |
| MsG0380013944.01.T01 | MTR_1779s0010 | 89.831 | 118 | 12 | 0 | 1 | 118 | 1 | 118 | 5.28e-75 | 218 |
| MsG0380013944.01.T01 | MTR_0002s0140 | 93.137 | 102 | 7 | 0 | 18 | 119 | 152 | 253 | 1.63e-63 | 194 |
| MsG0380013944.01.T01 | MTR_0002s0780 | 84.112 | 107 | 17 | 0 | 1 | 107 | 32 | 138 | 1.06e-62 | 191 |
| MsG0380013944.01.T01 | MTR_0702s0030 | 92.473 | 93 | 7 | 0 | 1 | 93 | 1 | 93 | 3.41e-58 | 175 |
| MsG0380013944.01.T01 | MTR_8g081460 | 92.473 | 93 | 7 | 0 | 1 | 93 | 1 | 93 | 3.41e-58 | 175 |
| MsG0380013944.01.T01 | MTR_2g087560 | 100.000 | 62 | 0 | 0 | 58 | 119 | 5 | 66 | 8.33e-39 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013944.01.T01 | ATCG00790 | 89.916 | 119 | 12 | 0 | 1 | 119 | 17 | 135 | 2.48e-75 | 219 |
| MsG0380013944.01.T01 | AT2G28815 | 69.492 | 118 | 34 | 1 | 2 | 119 | 176 | 291 | 7.25e-52 | 165 |
| MsG0380013944.01.T01 | ATMG00080 | 44.444 | 117 | 57 | 1 | 8 | 116 | 60 | 176 | 3.98e-27 | 99.0 |
Find 40 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGTTCGTATAGGCATTT+TGG | 0.204790 | 3:-48483370 | None:intergenic |
| TTCGCCGAGGTGGGAAAATA+TGG | 0.213680 | 3:+48483175 | MsG0380013944.01.T01:CDS |
| GAAAAGGATCTCCCGAATAT+TGG | 0.285746 | 3:+48483259 | MsG0380013944.01.T01:CDS |
| CTTCGGAAAATATGCTCTTC+AGG | 0.308187 | 3:+48483086 | MsG0380013944.01.T01:CDS |
| AACGACAGCTACCCAATATT+CGG | 0.319047 | 3:-48483271 | None:intergenic |
| CGGCAAAATACTTTATGAAA+TGG | 0.331198 | 3:+48483299 | MsG0380013944.01.T01:CDS |
| TACCGAAACGCGTATGGGTT+CGG | 0.335014 | 3:+48483236 | MsG0380013944.01.T01:CDS |
| TCCCGAACCCATACGCGTTT+CGG | 0.342652 | 3:-48483238 | None:intergenic |
| TCGGTAGGTCTTACTGTAAC+AGG | 0.351913 | 3:-48483219 | None:intergenic |
| ACCGAAACGCGTATGGGTTC+GGG | 0.378215 | 3:+48483237 | MsG0380013944.01.T01:CDS |
| ACGCGTATGGGTTCGGGAAA+AGG | 0.380444 | 3:+48483243 | MsG0380013944.01.T01:CDS |
| AAAAGGATCTCCCGAATATT+GGG | 0.401363 | 3:+48483260 | MsG0380013944.01.T01:CDS |
| TTCAGGCACTTGAGCCCGCT+TGG | 0.408794 | 3:+48483103 | MsG0380013944.01.T01:CDS |
| CTTACTGTAACAGGTTTGTC+TGG | 0.423476 | 3:-48483210 | None:intergenic |
| ACGACAGCTACCCAATATTC+GGG | 0.439549 | 3:-48483270 | None:intergenic |
| CCCAGAAAATATAGCTAGAA+AGG | 0.450098 | 3:+48483329 | MsG0380013944.01.T01:CDS |
| GGCAAAATACTTTATGAAAT+GGG | 0.452998 | 3:+48483300 | MsG0380013944.01.T01:CDS |
| CGAGGTAATACAATTTCCTT+CGG | 0.460344 | 3:+48483069 | MsG0380013944.01.T01:CDS |
| AAGACCTACCGAAACGCGTA+TGG | 0.469364 | 3:+48483230 | MsG0380013944.01.T01:CDS |
| TCACGAAATGTTCGCCGAGG+TGG | 0.471440 | 3:+48483165 | MsG0380013944.01.T01:CDS |
| GGAAATTGTATTACCTCGAT+AGG | 0.489800 | 3:-48483064 | None:intergenic |
| GACAAATAGAAGCAGGGCGA+CGG | 0.495582 | 3:+48483136 | MsG0380013944.01.T01:CDS |
| CACGAAATGTTCGCCGAGGT+GGG | 0.504047 | 3:+48483166 | MsG0380013944.01.T01:CDS |
| AGAATGAATTGAGTTCGTAT+AGG | 0.508317 | 3:-48483378 | None:intergenic |
| ACATCTAGACAAATAGAAGC+AGG | 0.517724 | 3:+48483129 | MsG0380013944.01.T01:CDS |
| ACAAATAGAAGCAGGGCGAC+GGG | 0.523315 | 3:+48483137 | MsG0380013944.01.T01:CDS |
| CAACATCGAGGAAGAATGAA+AGG | 0.544496 | 3:+48483036 | None:intergenic |
| TCGCCGAGGTGGGAAAATAT+GGG | 0.558660 | 3:+48483176 | MsG0380013944.01.T01:CDS |
| AAATACTTTATGAAATGGGA+GGG | 0.559811 | 3:+48483304 | MsG0380013944.01.T01:CDS |
| TGTCTAGATGTGATCCAAGC+GGG | 0.577171 | 3:-48483117 | None:intergenic |
| AGACCTACCGAAACGCGTAT+GGG | 0.590467 | 3:+48483231 | MsG0380013944.01.T01:CDS |
| TGGGTAGCTGTCGTTAAACC+CGG | 0.594583 | 3:+48483279 | MsG0380013944.01.T01:CDS |
| AATACTTTATGAAATGGGAG+GGG | 0.600055 | 3:+48483305 | MsG0380013944.01.T01:CDS |
| AAAATACTTTATGAAATGGG+AGG | 0.611197 | 3:+48483303 | MsG0380013944.01.T01:CDS |
| GAACCCATACGCGTTTCGGT+AGG | 0.634160 | 3:-48483234 | None:intergenic |
| TAGAAAGGCTATTTCAATAG+CGG | 0.635841 | 3:+48483344 | MsG0380013944.01.T01:CDS |
| CATCTAGACAAATAGAAGCA+GGG | 0.656135 | 3:+48483130 | MsG0380013944.01.T01:CDS |
| ATGAAAGGAAAAGCCTATCG+AGG | 0.661155 | 3:+48483051 | MsG0380013944.01.T01:CDS |
| TTGTCTAGATGTGATCCAAG+CGG | 0.679866 | 3:-48483118 | None:intergenic |
| ATGTCACGAAATGTTCGCCG+AGG | 0.702470 | 3:+48483162 | MsG0380013944.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAATACTTTATGAAATGGG+AGG | + | Chr3:48483303-48483322 | MsG0380013944.01.T01:CDS | 25.0% |
| ! | AAATACTTTATGAAATGGGA+GGG | + | Chr3:48483304-48483323 | MsG0380013944.01.T01:CDS | 25.0% |
| ! | GGCAAAATACTTTATGAAAT+GGG | + | Chr3:48483300-48483319 | MsG0380013944.01.T01:CDS | 25.0% |
| !!! | ATTTCATAAAGTATTTTGCC+GGG | - | Chr3:48483300-48483319 | None:intergenic | 25.0% |
| !!! | CATTTCATAAAGTATTTTGC+CGG | - | Chr3:48483301-48483320 | None:intergenic | 25.0% |
| AATACTTTATGAAATGGGAG+GGG | + | Chr3:48483305-48483324 | MsG0380013944.01.T01:CDS | 30.0% | |
| AGAATGAATTGAGTTCGTAT+AGG | - | Chr3:48483381-48483400 | None:intergenic | 30.0% | |
| CGGCAAAATACTTTATGAAA+TGG | + | Chr3:48483299-48483318 | MsG0380013944.01.T01:CDS | 30.0% | |
| ! | TAGAAAGGCTATTTCAATAG+CGG | + | Chr3:48483344-48483363 | MsG0380013944.01.T01:CDS | 30.0% |
| !!! | CCTTTCTAGCTATATTTTCT+GGG | - | Chr3:48483332-48483351 | None:intergenic | 30.0% |
| AAAAGGATCTCCCGAATATT+GGG | + | Chr3:48483260-48483279 | MsG0380013944.01.T01:CDS | 35.0% | |
| ACATCTAGACAAATAGAAGC+AGG | + | Chr3:48483129-48483148 | MsG0380013944.01.T01:CDS | 35.0% | |
| CATCTAGACAAATAGAAGCA+GGG | + | Chr3:48483130-48483149 | MsG0380013944.01.T01:CDS | 35.0% | |
| CCCAGAAAATATAGCTAGAA+AGG | + | Chr3:48483329-48483348 | MsG0380013944.01.T01:CDS | 35.0% | |
| CGAGGTAATACAATTTCCTT+CGG | + | Chr3:48483069-48483088 | MsG0380013944.01.T01:CDS | 35.0% | |
| GGAAATTGTATTACCTCGAT+AGG | - | Chr3:48483067-48483086 | None:intergenic | 35.0% | |
| ! | TTGAGTTCGTATAGGCATTT+TGG | - | Chr3:48483373-48483392 | None:intergenic | 35.0% |
| !!! | GCCTTTCTAGCTATATTTTC+TGG | - | Chr3:48483333-48483352 | None:intergenic | 35.0% |
| AACGACAGCTACCCAATATT+CGG | - | Chr3:48483274-48483293 | None:intergenic | 40.0% | |
| ATGAAAGGAAAAGCCTATCG+AGG | + | Chr3:48483051-48483070 | MsG0380013944.01.T01:CDS | 40.0% | |
| CTTACTGTAACAGGTTTGTC+TGG | - | Chr3:48483213-48483232 | None:intergenic | 40.0% | |
| CTTCGGAAAATATGCTCTTC+AGG | + | Chr3:48483086-48483105 | MsG0380013944.01.T01:CDS | 40.0% | |
| GAAAAGGATCTCCCGAATAT+TGG | + | Chr3:48483259-48483278 | MsG0380013944.01.T01:CDS | 40.0% | |
| TTGTCTAGATGTGATCCAAG+CGG | - | Chr3:48483121-48483140 | None:intergenic | 40.0% | |
| !! | CTGAAGAGCATATTTTCCGA+AGG | - | Chr3:48483088-48483107 | None:intergenic | 40.0% |
| ACGACAGCTACCCAATATTC+GGG | - | Chr3:48483273-48483292 | None:intergenic | 45.0% | |
| TCGGTAGGTCTTACTGTAAC+AGG | - | Chr3:48483222-48483241 | None:intergenic | 45.0% | |
| TGTCTAGATGTGATCCAAGC+GGG | - | Chr3:48483120-48483139 | None:intergenic | 45.0% | |
| ! | GTACCCATATTTTCCCACCT+CGG | - | Chr3:48483182-48483201 | None:intergenic | 45.0% |
| AAGACCTACCGAAACGCGTA+TGG | + | Chr3:48483230-48483249 | MsG0380013944.01.T01:CDS | 50.0% | |
| ACAAATAGAAGCAGGGCGAC+GGG | + | Chr3:48483137-48483156 | MsG0380013944.01.T01:CDS | 50.0% | |
| AGACCTACCGAAACGCGTAT+GGG | + | Chr3:48483231-48483250 | MsG0380013944.01.T01:CDS | 50.0% | |
| ATGTCACGAAATGTTCGCCG+AGG | + | Chr3:48483162-48483181 | MsG0380013944.01.T01:CDS | 50.0% | |
| GACAAATAGAAGCAGGGCGA+CGG | + | Chr3:48483136-48483155 | MsG0380013944.01.T01:CDS | 50.0% | |
| TACCGAAACGCGTATGGGTT+CGG | + | Chr3:48483236-48483255 | MsG0380013944.01.T01:CDS | 50.0% | |
| TCGCCGAGGTGGGAAAATAT+GGG | + | Chr3:48483176-48483195 | MsG0380013944.01.T01:CDS | 50.0% | |
| TGGGTAGCTGTCGTTAAACC+CGG | + | Chr3:48483279-48483298 | MsG0380013944.01.T01:CDS | 50.0% | |
| TTCGCCGAGGTGGGAAAATA+TGG | + | Chr3:48483175-48483194 | MsG0380013944.01.T01:CDS | 50.0% | |
| ACCGAAACGCGTATGGGTTC+GGG | + | Chr3:48483237-48483256 | MsG0380013944.01.T01:CDS | 55.0% | |
| ACGCGTATGGGTTCGGGAAA+AGG | + | Chr3:48483243-48483262 | MsG0380013944.01.T01:CDS | 55.0% | |
| CACGAAATGTTCGCCGAGGT+GGG | + | Chr3:48483166-48483185 | MsG0380013944.01.T01:CDS | 55.0% | |
| GAACCCATACGCGTTTCGGT+AGG | - | Chr3:48483237-48483256 | None:intergenic | 55.0% | |
| TCACGAAATGTTCGCCGAGG+TGG | + | Chr3:48483165-48483184 | MsG0380013944.01.T01:CDS | 55.0% | |
| TCCCGAACCCATACGCGTTT+CGG | - | Chr3:48483241-48483260 | None:intergenic | 55.0% | |
| TTCAGGCACTTGAGCCCGCT+TGG | + | Chr3:48483103-48483122 | MsG0380013944.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 48483051 | 48483410 | 48483051 | ID=MsG0380013944.01;Name=MsG0380013944.01 |
| Chr3 | mRNA | 48483051 | 48483410 | 48483051 | ID=MsG0380013944.01.T01;Parent=MsG0380013944.01;Name=MsG0380013944.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|119 |
| Chr3 | exon | 48483051 | 48483410 | 48483051 | ID=MsG0380013944.01.T01:exon:17710;Parent=MsG0380013944.01.T01 |
| Chr3 | CDS | 48483051 | 48483410 | 48483051 | ID=MsG0380013944.01.T01:cds;Parent=MsG0380013944.01.T01 |
| Gene Sequence |
| Protein sequence |
