AlfalfaGEDB | MsG0380013995.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013995.01

KEGG: K05582
GO: GO:0003735 GO:0005622 GO:0005840 GO:0006412 GO:0008137 GO:0048038 GO:0051536 GO:0051539 GO:0055114
PFAM: PF00189 PF00238 PF00253 PF01058

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013995.01.T01	XP_039689496.1	66.792	265	42	3	61	280	114	377	5.09E-95	295

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013995.01.T01	Q2PMP9	91.86	86	7	0	195	280	37	122	3.03E-48	159

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013995.01.T01	A0A6L2LS12	60.386	207	66	4	72	278	131	321	1.79e-62	209

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048689.01	MsG0380013995.01	0.831107	2.013314e-55	2.163391e-52
MsG0080048691.01	MsG0380013995.01	0.800854	1.185600e-48	5.579216e-46
MsG0080048692.01	MsG0380013995.01	0.838918	2.161620e-57	2.937794e-54
MsG0080048698.01	MsG0380013995.01	0.879846	8.926642e-70	4.916216e-66
MsG0080048699.01	MsG0380013995.01	0.871290	7.648655e-67	3.069012e-63
MsG0080048813.01	MsG0380013995.01	0.815715	8.020583e-52	5.572181e-49
MsG0180002226.01	MsG0380013995.01	0.839971	1.151502e-57	1.616761e-54
MsG0180002435.01	MsG0380013995.01	0.832608	8.579770e-56	9.638431e-53
MsG0180004434.01	MsG0380013995.01	0.826108	3.250542e-54	3.019886e-51
MsG0380013448.01	MsG0380013995.01	0.839260	1.762894e-57	2.421134e-54
MsG0380013888.01	MsG0380013995.01	0.874829	4.975012e-68	2.272675e-64
MsG0380013889.01	MsG0380013995.01	0.850390	1.751634e-60	3.425812e-57
MsG0380013916.01	MsG0380013995.01	0.871991	4.481097e-67	1.843638e-63
MsG0380013917.01	MsG0380013995.01	0.894020	3.651711e-75	3.565936e-71
MsG0380013918.01	MsG0380013995.01	0.887422	1.446871e-72	1.075409e-68
MsG0380013919.01	MsG0380013995.01	0.849296	3.541810e-60	6.683987e-57
MsG0380013920.01	MsG0380013995.01	0.882687	8.451298e-71	5.196893e-67
MsG0380013923.01	MsG0380013995.01	0.907473	4.876884e-81	8.664367e-77
MsG0380013926.01	MsG0380013995.01	0.876409	1.428731e-68	6.919453e-65
MsG0380013929.01	MsG0380013995.01	0.865178	7.126511e-65	2.297430e-61
MsG0380013931.01	MsG0380013995.01	0.916190	2.398622e-85	6.517903e-81
MsG0380013932.01	MsG0380013995.01	0.935570	6.887701e-97	5.586981e-92
MsG0380013935.01	MsG0380013995.01	0.804002	2.662688e-49	1.357621e-46
MsG0380013939.01	MsG0380013995.01	0.813021	3.159686e-51	2.040166e-48
MsG0380013940.01	MsG0380013995.01	0.803215	3.878024e-49	1.937619e-46
MsG0380013941.01	MsG0380013995.01	0.871128	8.650937e-67	3.450060e-63
MsG0380013942.01	MsG0380013995.01	0.898712	4.055280e-77	4.851461e-73
MsG0380013943.01	MsG0380013995.01	0.815584	8.576851e-52	5.937101e-49
MsG0380013944.01	MsG0380013995.01	0.916677	1.335333e-85	3.711197e-81
MsG0380013945.01	MsG0380013995.01	0.818360	2.041688e-52	1.525084e-49
MsG0380013947.01	MsG0380013995.01	0.809151	2.180486e-50	1.270491e-47
MsG0380013948.01	MsG0380013995.01	0.872561	2.894284e-67	1.216777e-63
MsG0380013949.01	MsG0380013995.01	0.851080	1.120186e-60	2.240923e-57
MsG0380013950.01	MsG0380013995.01	0.894004	3.704414e-75	3.615532e-71
MsG0380013951.01	MsG0380013995.01	0.877726	4.988197e-69	2.535146e-65
MsG0380013952.01	MsG0380013995.01	0.894625	2.068656e-75	2.072856e-71
MsG0380013956.01	MsG0380013995.01	0.800429	1.447323e-48	6.737770e-46
MsG0380013957.01	MsG0380013995.01	0.801337	9.444147e-49	4.498677e-46
MsG0380013958.01	MsG0380013995.01	0.827040	1.948245e-54	1.859068e-51
MsG0380013959.01	MsG0380013995.01	0.846747	1.788715e-59	3.109781e-56
MsG0380013964.01	MsG0380013995.01	0.869115	3.943159e-66	1.462440e-62
MsG0380013966.01	MsG0380013995.01	0.890087	1.352104e-73	1.120290e-69
MsG0380013967.01	MsG0380013995.01	0.804730	1.877445e-49	9.754040e-47
MsG0380013968.01	MsG0380013995.01	0.875142	3.888253e-68	1.796285e-64
MsG0380013969.01	MsG0380013995.01	0.900173	9.548143e-78	1.219969e-73
MsG0380013971.01	MsG0380013995.01	0.812359	4.412366e-51	2.799576e-48
MsG0380013972.01	MsG0380013995.01	0.918751	1.058463e-86	3.277488e-82
MsG0380013977.01	MsG0380013995.01	0.809792	1.588368e-50	9.414021e-48
MsG0380013978.01	MsG0380013995.01	0.847778	9.322478e-60	1.674946e-56
MsG0380013979.01	MsG0380013995.01	0.835319	1.797910e-56	2.191019e-53
MsG0380013980.01	MsG0380013995.01	0.861525	9.649179e-64	2.738627e-60
MsG0380013981.01	MsG0380013995.01	0.943005	2.621361e-102	3.419173e-97
MsG0380013983.01	MsG0380013995.01	0.872528	2.968069e-67	1.246317e-63
MsG0380013988.01	MsG0380013995.01	0.827296	1.691749e-54	1.626573e-51
MsG0380013995.01	MsG0380014004.01	0.843651	1.228941e-58	1.935926e-55
MsG0380013995.01	MsG0380014005.01	0.822681	2.080204e-53	1.753241e-50
MsG0380013995.01	MsG0380014008.01	0.938203	9.907077e-99	9.407883e-94
MsG0380013995.01	MsG0380014009.01	0.859445	4.117104e-63	1.087635e-59
MsG0380013995.01	MsG0380014011.01	0.862227	5.881616e-64	1.709952e-60
MsG0380013995.01	MsG0380014014.01	0.803479	3.419102e-49	1.719995e-46
MsG0380013995.01	MsG0380014018.01	0.845972	2.909236e-59	4.932928e-56
MsG0380013995.01	MsG0380014023.01	0.862989	3.427482e-64	1.023031e-60
MsG0380013995.01	MsG0380014026.01	0.857646	1.416691e-62	3.521139e-59
MsG0380013995.01	MsG0380014028.01	0.804544	2.053276e-49	1.061536e-46
MsG0380013995.01	MsG0380014030.01	0.851047	1.144186e-60	2.286467e-57
MsG0380013995.01	MsG0380014032.01	0.823462	1.367376e-53	1.178110e-50
MsG0380013995.01	MsG0380014033.01	0.852195	5.412770e-61	1.122364e-57
MsG0380013995.01	MsG0380014034.01	0.853954	1.697680e-61	3.731956e-58
MsG0380013995.01	MsG0380014035.01	0.858996	5.611313e-63	1.459645e-59
MsG0380013995.01	MsG0380014036.01	0.933452	1.837040e-95	1.305803e-90
MsG0380013995.01	MsG0380014039.01	0.922817	6.001651e-89	2.320341e-84
MsG0380013995.01	MsG0380014040.01	0.925951	9.139762e-91	4.196867e-86
MsG0380013995.01	MsG0380014041.01	0.865486	5.701639e-65	1.858182e-61
MsG0380013995.01	MsG0380014044.01	0.885363	8.673985e-72	5.937426e-68
MsG0380013995.01	MsG0380014048.01	0.806058	9.891302e-50	5.317098e-47
MsG0380013995.01	MsG0380014050.01	0.837344	5.494661e-57	7.116308e-54
MsG0380013995.01	MsG0380014051.01	0.919046	7.339223e-87	2.308307e-82
MsG0380013995.01	MsG0380014052.01	0.805330	1.406127e-49	7.418539e-47
MsG0380013995.01	MsG0380014055.01	0.857819	1.258949e-62	3.146994e-59
MsG0380013995.01	MsG0380014057.01	0.887042	2.019441e-72	1.477923e-68
MsG0380013995.01	MsG0380017006.01	0.883656	3.731338e-71	2.387360e-67
MsG0380013995.01	MsG0380017007.01	0.907046	7.734247e-81	1.347295e-76
MsG0380013995.01	MsG0480018296.01	0.861280	1.145916e-63	3.225484e-60
MsG0380013995.01	MsG0480022300.01	0.813995	1.930282e-51	1.279679e-48
MsG0380013995.01	MsG0480023344.01	0.809395	1.932757e-50	1.133495e-47
MsG0380013995.01	MsG0580027677.01	0.821964	3.050592e-53	2.518952e-50
MsG0380013995.01	MsG0580028230.01	0.810560	1.084751e-50	6.560005e-48
MsG0380013995.01	MsG0780038197.01	0.825132	5.537706e-54	5.004014e-51
MsG0380013995.01	MsG0780040316.01	0.887038	2.026129e-72	1.482577e-68
MsG0380013995.01	MsG0780040317.01	0.843642	1.235546e-58	1.945811e-55
MsG0380013995.01	MsG0880044440.01	0.829040	6.428271e-55	6.502103e-52
MsG0380013995.01	MsG0880045283.01	0.817116	3.895527e-52	2.811965e-49
MsG0280007041.01	MsG0380013995.01	0.829534	4.877303e-55	5.005744e-52
MsG0280007042.01	MsG0380013995.01	0.880041	7.610430e-70	4.224252e-66
MsG0280010145.01	MsG0380013995.01	0.884178	2.392704e-71	1.562936e-67

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013995.01.T01	MTR_4g051390	100.000	86	0	0	195	280	37	122	9.76e-53	168
MsG0380013995.01.T01	MTR_1779s0020	82.796	93	16	0	188	280	30	122	1.67e-47	155
MsG0380013995.01.T01	MTR_4g051410	88.636	88	10	0	61	148	114	201	4.28e-46	154
MsG0380013995.01.T01	MTR_0002s0630	68.376	117	30	3	1	112	83	197	5.33e-46	157
MsG0380013995.01.T01	MTR_7g021790	98.611	72	1	0	1	72	83	154	3.75e-45	152
MsG0380013995.01.T01	MTR_4g051225	98.611	72	1	0	1	72	83	154	4.04e-45	152
MsG0380013995.01.T01	MTR_2g087550	87.500	88	11	0	193	280	35	122	2.57e-44	149
MsG0380013995.01.T01	MTR_0002s0780	77.273	88	20	0	193	280	163	250	2.42e-39	138
MsG0380013995.01.T01	MTR_0002s0790	70.130	77	23	0	72	148	150	226	3.56e-30	114
MsG0380013995.01.T01	MTR_8g038470	68.182	88	21	1	61	148	91	171	1.85e-29	110
MsG0380013995.01.T01	MTR_3g035610	93.182	44	3	0	149	192	45	88	2.12e-23	92.0
MsG0380013995.01.T01	MTR_3g104310	52.113	71	33	1	2	72	126	195	4.17e-22	91.7
MsG0380013995.01.T01	MTR_5g063380	67.925	53	17	0	140	192	30	82	6.75e-18	79.3
MsG0380013995.01.T01	MTR_5g096490	42.353	85	49	0	195	279	48	132	3.16e-13	65.9
MsG0380013995.01.T01	MTR_5g007240	42.353	85	49	0	195	279	81	165	4.86e-13	66.2
MsG0380013995.01.T01	MTR_5g096490	42.353	85	49	0	195	279	81	165	4.86e-13	66.2
MsG0380013995.01.T01	MTR_4g116740	85.714	35	5	0	223	257	65	99	8.59e-13	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013995.01.T01	ATCG00780	79.570	93	19	0	188	280	30	122	7.74e-46	150
MsG0380013995.01.T01	ATCG00430	98.611	72	1	0	1	72	83	154	4.31e-45	152
MsG0380013995.01.T01	ATCG00800	90.909	77	7	0	72	148	129	205	2.54e-43	147
MsG0380013995.01.T01	AT5G11770	53.521	71	32	1	2	72	134	203	3.61e-22	92.0
MsG0380013995.01.T01	ATCG00330	86.364	44	6	0	149	192	45	88	1.10e-21	87.4
MsG0380013995.01.T01	AT5G46160	38.043	92	50	2	195	279	80	171	5.84e-13	66.2
MsG0380013995.01.T01	AT5G46160	38.043	92	50	2	195	279	81	172	5.89e-13	66.2

Find 59 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATACAGTTCGAACTATTTA+TGG	0.120735	3:-48598580	MsG0380013995.01.T01:CDS
CCCATAGCAATAACATATTT+TGG	0.145578	3:+48600707	None:intergenic
TATCGAGACTTTGGATTATC+TGG	0.188027	3:-48596324	MsG0380013995.01.T01:CDS
GATCTTTCTAAAGATGAATT+TGG	0.231628	3:+48596237	None:intergenic
TCTATAACGGCTTCCGGTTT+AGG	0.271031	3:+48600581	None:intergenic
CGATTCTTATAGTACTGTTC+GGG	0.334412	3:-48600651	MsG0380013995.01.T01:CDS
TAAAGAATAGAATTTCGTTT+AGG	0.349086	3:-48598768	MsG0380013995.01.T01:CDS
GGGCACCGTAACTATGAAAA+TGG	0.352067	3:-48600768	None:intergenic
ATAATTAGCTCTCGGTCTTC+CGG	0.352637	3:+48596344	None:intergenic
AGCTATTGAATTAGCTGAAC+AGG	0.363850	3:-48598731	MsG0380013995.01.T01:CDS
ATACAGTTCGAACTATTTAT+GGG	0.369096	3:-48598579	MsG0380013995.01.T01:CDS
ATGGGAGCCTGTACAATTAC+AGG	0.381263	3:-48600689	MsG0380013995.01.T01:CDS
ATAGCATCTATAACGGCTTC+CGG	0.383241	3:+48600575	None:intergenic
TAGAAAGATCTGAAGTGATC+AGG	0.408019	3:-48596224	MsG0380013995.01.T01:CDS
AGAGCTAATTATCGAGACTT+TGG	0.411010	3:-48596333	MsG0380013995.01.T01:CDS
AATTTAACTGTCTCAATTCT+CGG	0.413515	3:+48596070	None:intergenic
GCCAGGCTGTCCACCTAAAC+CGG	0.419334	3:-48600594	MsG0380013995.01.T01:CDS
CCGATTCTTATAGTACTGTT+CGG	0.421214	3:-48600652	MsG0380013995.01.T01:CDS
ATAAATAGTTCGAACTGTAT+AGG	0.427068	3:+48598582	None:intergenic
ACCAAAATATGTTATTGCTA+TGG	0.431305	3:-48600708	MsG0380013995.01.T01:CDS
GGAGTTCAAGTACAAATTGC+GGG	0.442137	3:-48598697	MsG0380013995.01.T01:CDS
TTATAGTACTGTTCGGGGCG+TGG	0.449303	3:-48600645	MsG0380013995.01.T01:CDS
ATTCTTGCAGAATTTATAGC+TGG	0.453857	3:-48598796	MsG0380013995.01.T01:intron
CCAAAATATGTTATTGCTAT+GGG	0.459012	3:-48600707	MsG0380013995.01.T01:CDS
CCTGTGGATGTCTATTTGCC+AGG	0.459278	3:-48600611	MsG0380013995.01.T01:CDS
ATTTAACTGTCTCAATTCTC+GGG	0.470566	3:+48596071	None:intergenic
AAGAAATTGCACGTGTCGAA+TGG	0.483791	3:-48598660	MsG0380013995.01.T01:CDS
TCCGGTTTAGGTGGACAGCC+TGG	0.487255	3:+48600593	None:intergenic
GCTGAACAGGCAGGTACAAA+AGG	0.497837	3:-48598718	MsG0380013995.01.T01:CDS
ATCTCGTATTATAATACCTC+GGG	0.516039	3:+48596024	None:intergenic
TCATATAATCGAACTAAAGA+AGG	0.525955	3:+48600743	None:intergenic
CATCCCTCCTGTAATTGTAC+AGG	0.526031	3:+48600682	None:intergenic
GATAAAGAAGGAAATCCAAA+AGG	0.534245	3:-48596117	MsG0380013995.01.T01:CDS
CGAATGGATTAGAGAAGGTA+GGG	0.541012	3:-48598644	MsG0380013995.01.T01:CDS
CCGAACAGTACTATAAGAAT+CGG	0.541435	3:+48600652	None:intergenic
TCTCAATTCTCGGGCTATTG+CGG	0.549036	3:+48596080	None:intergenic
AGAAAGATCTGAAGTGATCA+GGG	0.551046	3:-48596223	MsG0380013995.01.T01:CDS
CAAATTGCGGGACGTATCGA+CGG	0.567491	3:-48598685	MsG0380013995.01.T01:CDS
GCGGTTCTCATTGATAAAGA+AGG	0.571105	3:-48596129	MsG0380013995.01.T01:CDS
ATAACGGCTTCCGGTTTAGG+TGG	0.571411	3:+48600584	None:intergenic
TTAGCTCGAATGGTTTGTAG+AGG	0.585057	3:+48598619	None:intergenic
AAAGAACTAAAACGTAGTAA+TGG	0.588124	3:-48596180	MsG0380013995.01.T01:CDS
CCTGGCAAATAGACATCCAC+AGG	0.589717	3:+48600611	None:intergenic
AAGTCTCGATAATTAGCTCT+CGG	0.595033	3:+48596336	None:intergenic
TCGAATGGATTAGAGAAGGT+AGG	0.595160	3:-48598645	MsG0380013995.01.T01:CDS
CAACGTCGACGAAGACGTGT+AGG	0.602876	3:+48596375	None:intergenic
ATTGAATTAGCTGAACAGGC+AGG	0.608696	3:-48598727	MsG0380013995.01.T01:CDS
AATAGTTTCATTAGCACCCG+AGG	0.609986	3:-48596040	MsG0380013995.01.T01:CDS
CGTGGATAAGCTAATTCCTG+TGG	0.619980	3:-48600627	MsG0380013995.01.T01:CDS
CGTGTCGAATGGATTAGAGA+AGG	0.634314	3:-48598649	MsG0380013995.01.T01:CDS
TACAGTTCGAACTATTTATG+GGG	0.637128	3:-48598578	MsG0380013995.01.T01:intron
GATCTCGTATTATAATACCT+CGG	0.645272	3:+48596023	None:intergenic
AGGAGTTCAAGTACAAATTG+CGG	0.647406	3:-48598698	MsG0380013995.01.T01:CDS
AATAAAGTATGATGATAATG+CGG	0.648055	3:-48596151	MsG0380013995.01.T01:CDS
GGAGCCTGTACAATTACAGG+AGG	0.664070	3:-48600686	MsG0380013995.01.T01:CDS
AAAGTATGATGATAATGCGG+CGG	0.676057	3:-48596148	MsG0380013995.01.T01:CDS
GATTCTTATAGTACTGTTCG+GGG	0.694011	3:-48600650	MsG0380013995.01.T01:CDS
GAGCCTGTACAATTACAGGA+GGG	0.718983	3:-48600685	MsG0380013995.01.T01:CDS
CGTGTAGGTGCACTATTACG+CGG	0.722612	3:+48596390	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATCTTATTAATATTAAAG+AGG	-	Chr3:48598873-48598892	MsG0380013995.01.T01:intron	10.0%
!!	AATAAAAAAAAAGACAAATA+TGG	-	Chr3:48599151-48599170	MsG0380013995.01.T01:intron	10.0%
!!	AATAAAAAAGACAATAATAT+AGG	-	Chr3:48597207-48597226	MsG0380013995.01.T01:intron	10.0%
!!	AGATACATTATAAAAAAATT+CGG	+	Chr3:48597404-48597423	None:intergenic	10.0%
!!	ATAAAAAAGACAATAATATA+GGG	-	Chr3:48597208-48597227	MsG0380013995.01.T01:intron	10.0%
!!!	AAATTTGTTATTTCTTTTTT+GGG	+	Chr3:48598342-48598361	None:intergenic	10.0%
!!!	CTTTTTTTTTATTATCATAT+TGG	+	Chr3:48599144-48599163	None:intergenic	10.0%
!!!	TAAATTTGTTATTTCTTTTT+TGG	+	Chr3:48598343-48598362	None:intergenic	10.0%
!!	AAACTTATATAAAAAAAAGC+AGG	-	Chr3:48596542-48596561	MsG0380013995.01.T01:intron	15.0%
!!	ATGAAATTGAATATAATCTT+AGG	+	Chr3:48598965-48598984	None:intergenic	15.0%
!!	TAATTAAAAAAAAGGGATAT+AGG	-	Chr3:48597903-48597922	MsG0380013995.01.T01:intron	15.0%
!!	TCAAATAAAATGAAAAGAAA+TGG	-	Chr3:48597377-48597396	MsG0380013995.01.T01:intron	15.0%
!!	TTTATCAAAAGCTAAAAATA+AGG	+	Chr3:48598285-48598304	None:intergenic	15.0%
!!	TTTCATTCATATCTTAATTA+TGG	-	Chr3:48597160-48597179	MsG0380013995.01.T01:intron	15.0%
!!!	AATAGATACATATTTTTTAG+TGG	+	Chr3:48597679-48597698	None:intergenic	15.0%
!!!	ATAAATTTAAGATGTAATGT+TGG	+	Chr3:48599063-48599082	None:intergenic	15.0%
!!!	TAAAATAGTAACATTCTTTT+TGG	-	Chr3:48597514-48597533	MsG0380013995.01.T01:intron	15.0%
!!!	TAAATTTAAGATGTAATGTT+GGG	+	Chr3:48599062-48599081	None:intergenic	15.0%
!!!	TGCTTTTTTTTATATAAGTT+TGG	+	Chr3:48596543-48596562	None:intergenic	15.0%
!!	AAGAATATACAGATAAATGA+AGG	-	Chr3:48598625-48598644	MsG0380013995.01.T01:CDS	20.0%
!!	AATAATCATTAGAACGAAAT+AGG	-	Chr3:48599891-48599910	MsG0380013995.01.T01:intron	20.0%
!!	AATCAAAATAAAGATCTATG+TGG	-	Chr3:48598546-48598565	MsG0380013995.01.T01:intron	20.0%
!!	AATGAATAGATGTATATTCT+AGG	+	Chr3:48597597-48597616	None:intergenic	20.0%
!!	AGAATATACAGATAAATGAA+GGG	-	Chr3:48598626-48598645	MsG0380013995.01.T01:CDS	20.0%
!!	ATATAGAATTCTACTATGTA+AGG	-	Chr3:48598681-48598700	MsG0380013995.01.T01:CDS	20.0%
!!	ATCCTGTATTTCATAAAAAT+TGG	+	Chr3:48597026-48597045	None:intergenic	20.0%
!!	ATGAAAAAAATGGTAATTGT+TGG	-	Chr3:48599922-48599941	MsG0380013995.01.T01:intron	20.0%
!!	ATTCAAATCGTAAAATTACT+TGG	+	Chr3:48597489-48597508	None:intergenic	20.0%
!!	ATTCATATCTTAATTATGGA+TGG	-	Chr3:48597164-48597183	MsG0380013995.01.T01:intron	20.0%
!!	ATTCTAAATTCATCCATATA+TGG	-	Chr3:48598747-48598766	MsG0380013995.01.T01:CDS	20.0%
!!	CAAGTAATTTCCTAAAATTA+GGG	+	Chr3:48597836-48597855	None:intergenic	20.0%
!!	GATATAGGATAAAAAATTAG+CGG	-	Chr3:48597918-48597937	MsG0380013995.01.T01:intron	20.0%
!!	TAAAGAATAGAATTTCGTTT+AGG	-	Chr3:48598019-48598038	MsG0380013995.01.T01:intron	20.0%
!!	TCAAGTAATTTCCTAAAATT+AGG	+	Chr3:48597837-48597856	None:intergenic	20.0%
!!	TCATCATACATAATTTATCT+AGG	+	Chr3:48597650-48597669	None:intergenic	20.0%
!!	TCCCAAATTTCTTAAAATTT+GGG	+	Chr3:48597702-48597721	None:intergenic	20.0%
!!	TCCTGTATTTCATAAAAATT+GGG	+	Chr3:48597025-48597044	None:intergenic	20.0%
!!	TTCATATCTTAATTATGGAT+GGG	-	Chr3:48597165-48597184	MsG0380013995.01.T01:intron	20.0%
!!	TTCCCAAATTTCTTAAAATT+TGG	+	Chr3:48597703-48597722	None:intergenic	20.0%
!!!	AAAAAATTAGCGGATTAAAT+GGG	-	Chr3:48597928-48597947	MsG0380013995.01.T01:intron	20.0%
!!!	AATAAAGTATGATGATAATG+CGG	-	Chr3:48600636-48600655	MsG0380013995.01.T01:CDS	20.0%
!!!	ATTCATTGAGATTCTAAAAT+TGG	-	Chr3:48597231-48597250	MsG0380013995.01.T01:intron	20.0%
!!!	CATTAACTATTTAAGATGTA+CGG	-	Chr3:48597311-48597330	MsG0380013995.01.T01:intron	20.0%
!!!	CTTATTGTATTTTGTACAAA+AGG	+	Chr3:48596479-48596498	None:intergenic	20.0%
!!!	GATAATGTTGTTTTGATATA+AGG	+	Chr3:48599188-48599207	None:intergenic	20.0%
!!!	GATTAATCATTTTATAGTGA+AGG	-	Chr3:48598382-48598401	MsG0380013995.01.T01:intron	20.0%
!!!	GCTGTTATTTTATATGTATA+TGG	-	Chr3:48596696-48596715	MsG0380013995.01.T01:intron	20.0%
!!!	GCTTTTCTTATTTCTTTTTT+TGG	+	Chr3:48600328-48600347	None:intergenic	20.0%
!!!	TAAAAAATTAGCGGATTAAA+TGG	-	Chr3:48597927-48597946	MsG0380013995.01.T01:intron	20.0%
!!!	TAAGAATTCATTCTTTTTTG+AGG	-	Chr3:48599023-48599042	MsG0380013995.01.T01:intron	20.0%
!!!	TCCCAAATTTTAAGAAATTT+GGG	-	Chr3:48597698-48597717	MsG0380013995.01.T01:intron	20.0%
!!!	TTCCCAAATTTTAAGAAATT+TGG	-	Chr3:48597697-48597716	MsG0380013995.01.T01:intron	20.0%
!!!	TTTAAAATAGAATACAATCG+CGG	+	Chr3:48599326-48599345	None:intergenic	20.0%
!!!	TTTTGTTATAGCATCTATAA+CGG	+	Chr3:48596222-48596241	None:intergenic	20.0%
!	AAAATACTTTATGAAATGGG+AGG	-	Chr3:48599788-48599807	MsG0380013995.01.T01:intron	25.0%
!	AAACCTATTTAAATGCTTTC+AGG	-	Chr3:48600032-48600051	MsG0380013995.01.T01:intron	25.0%
!	AAAGAAAAGTTTGATTGAGA+GGG	-	Chr3:48600252-48600271	MsG0380013995.01.T01:intron	25.0%
!	AAAGAACTAAAACGTAGTAA+TGG	-	Chr3:48600607-48600626	MsG0380013995.01.T01:CDS	25.0%
!	AAATACTTTATGAAATGGGA+GGG	-	Chr3:48599789-48599808	MsG0380013995.01.T01:intron	25.0%
!	AACCTATTTAAATGCTTTCA+GGG	-	Chr3:48600033-48600052	MsG0380013995.01.T01:intron	25.0%
!	AACGAAAAAGTGAATTAAAC+AGG	-	Chr3:48596451-48596470	MsG0380013995.01.T01:intron	25.0%
!	AATTTAACTGTCTCAATTCT+CGG	+	Chr3:48600720-48600739	None:intergenic	25.0%
!	ACCAAAATATGTTATTGCTA+TGG	-	Chr3:48596079-48596098	MsG0380013995.01.T01:CDS	25.0%
!	ATAAATAGTTCGAACTGTAT+AGG	+	Chr3:48598208-48598227	None:intergenic	25.0%
!	ATACAGTTCGAACTATTTAT+GGG	-	Chr3:48598208-48598227	MsG0380013995.01.T01:intron	25.0%
!	ATATAATCTTAGGTATTCAC+AGG	+	Chr3:48598955-48598974	None:intergenic	25.0%
!	ATCATTTCTTTGTATGAAGA+AGG	-	Chr3:48600152-48600171	MsG0380013995.01.T01:intron	25.0%
!	ATGGAACGATACTTAATTTA+GGG	-	Chr3:48597254-48597273	MsG0380013995.01.T01:intron	25.0%
!	CAACATTATCTAGTTAGATA+TGG	-	Chr3:48599198-48599217	MsG0380013995.01.T01:intron	25.0%
!	CAGAAAAAATCGAAACAAAA+TGG	-	Chr3:48597541-48597560	MsG0380013995.01.T01:intron	25.0%
!	CCAAAATATGTTATTGCTAT+GGG	-	Chr3:48596080-48596099	MsG0380013995.01.T01:CDS	25.0%
!	CCTGTATTTCATAAAAATTG+GGG	+	Chr3:48597024-48597043	None:intergenic	25.0%
!	CTTCTATCATTGATACTAAT+AGG	-	Chr3:48600212-48600231	MsG0380013995.01.T01:intron	25.0%
!	CTTTGATATAGAACCAAATA+TGG	+	Chr3:48599248-48599267	None:intergenic	25.0%
!	GAATATACAGATAAATGAAG+GGG	-	Chr3:48598627-48598646	MsG0380013995.01.T01:CDS	25.0%
!	GAGAAGTAAAAAAAAATGCA+GGG	-	Chr3:48596564-48596583	MsG0380013995.01.T01:intron	25.0%
!	GGAATATATTCATCCATATA+TGG	+	Chr3:48598763-48598782	None:intergenic	25.0%
!	GGCAAAATACTTTATGAAAT+GGG	-	Chr3:48599785-48599804	MsG0380013995.01.T01:intron	25.0%
!	GGTCTTTAGTATGAAAAAAA+TGG	-	Chr3:48599912-48599931	MsG0380013995.01.T01:intron	25.0%
!	TAATCCTTGATTATAATTGC+CGG	+	Chr3:48596354-48596373	None:intergenic	25.0%
!	TATACAGTTCGAACTATTTA+TGG	-	Chr3:48598207-48598226	MsG0380013995.01.T01:intron	25.0%
!	TATATTTGAAAATGTGTCAG+AGG	+	Chr3:48596408-48596427	None:intergenic	25.0%
!	TCATATAATCGAACTAAAGA+AGG	+	Chr3:48596047-48596066	None:intergenic	25.0%
!	TCATTTCTTTGTATGAAGAA+GGG	-	Chr3:48600153-48600172	MsG0380013995.01.T01:intron	25.0%
!	TTAAAATAGAATACAATCGC+GGG	+	Chr3:48599325-48599344	None:intergenic	25.0%
!	TTAGATATGGATAGCAAAAA+GGG	-	Chr3:48599211-48599230	MsG0380013995.01.T01:intron	25.0%
!	TTAGTATCAATGATAGAAGT+CGG	+	Chr3:48600211-48600230	None:intergenic	25.0%
!!	GATCTTTCTAAAGATGAATT+TGG	+	Chr3:48600553-48600572	None:intergenic	25.0%
!!!	AATCTTACTGATTCATTAGA+TGG	-	Chr3:48598985-48599004	MsG0380013995.01.T01:intron	25.0%
!!!	AGCAATAACATATTTTGGTT+CGG	+	Chr3:48596078-48596097	None:intergenic	25.0%
!!!	ATAATCAATTTTAGCTCGAA+TGG	+	Chr3:48598181-48598200	None:intergenic	25.0%
!!!	ATCTTACTGATTCATTAGAT+GGG	-	Chr3:48598986-48599005	MsG0380013995.01.T01:intron	25.0%
!!!	ATTGAGATTCTAAAATTGGA+TGG	-	Chr3:48597235-48597254	MsG0380013995.01.T01:intron	25.0%
!!!	ATTTCATAAAGTATTTTGCC+GGG	+	Chr3:48599785-48599804	None:intergenic	25.0%
!!!	CATTTCATAAAGTATTTTGC+CGG	+	Chr3:48599786-48599805	None:intergenic	25.0%
!!!	TAATTCACTTTTTCGTTTGT+CGG	+	Chr3:48596448-48596467	None:intergenic	25.0%
!!!	TCTATGGGTCATTTTATAAA+AGG	-	Chr3:48598704-48598723	MsG0380013995.01.T01:CDS	25.0%
	AAGGCCAAAAAGTTTAATCT+AGG	+	Chr3:48597462-48597481	None:intergenic	30.0%
	AATACTTTATGAAATGGGAG+GGG	-	Chr3:48599790-48599809	MsG0380013995.01.T01:intron	30.0%
	AATTTCCCATTTCTCACTTA+AGG	+	Chr3:48600356-48600375	None:intergenic	30.0%
	ACAGATATTTCTTGACTATC+TGG	+	Chr3:48597096-48597115	None:intergenic	30.0%
	ACATAATTTATCTAGGCGTA+CGG	+	Chr3:48597643-48597662	None:intergenic	30.0%
	AGAATGAATTGAGTTCGTAT+AGG	+	Chr3:48599866-48599885	None:intergenic	30.0%
	AGATATTTCTTGACTATCTG+GGG	+	Chr3:48597094-48597113	None:intergenic	30.0%
	AGGCCAAAAAGTTTAATCTA+GGG	+	Chr3:48597461-48597480	None:intergenic	30.0%
	AGGGAATCTTATGATATGTT+AGG	-	Chr3:48596912-48596931	MsG0380013995.01.T01:intron	30.0%
	ATCCAAAAGGAACCTATTTA+AGG	-	Chr3:48600058-48600077	MsG0380013995.01.T01:intron	30.0%
	ATTAAAATACGTTTCAGACG+CGG	+	Chr3:48596957-48596976	None:intergenic	30.0%
	ATTCTACTATGTAAGGTCTA+TGG	-	Chr3:48598688-48598707	MsG0380013995.01.T01:CDS	30.0%
	ATTCTTGCAGAATTTATAGC+TGG	-	Chr3:48597991-48598010	MsG0380013995.01.T01:intron	30.0%
	ATTTAACTGTCTCAATTCTC+GGG	+	Chr3:48600719-48600738	None:intergenic	30.0%
	CAAAGAAAAGTTTGATTGAG+AGG	-	Chr3:48600251-48600270	MsG0380013995.01.T01:intron	30.0%
	CAAGAATTTAGAAATCGTGA+GGG	+	Chr3:48597978-48597997	None:intergenic	30.0%
	CAGAAAATAGAAGGAATTCT+CGG	+	Chr3:48596864-48596883	None:intergenic	30.0%
	CAGATATTTCTTGACTATCT+GGG	+	Chr3:48597095-48597114	None:intergenic	30.0%
	CGGCAAAATACTTTATGAAA+TGG	-	Chr3:48599784-48599803	MsG0380013995.01.T01:intron	30.0%
	CGTAAAATTACTTGGTTGAA+AGG	+	Chr3:48597481-48597500	None:intergenic	30.0%
	GATAAAGAAGGAAATCCAAA+AGG	-	Chr3:48600670-48600689	MsG0380013995.01.T01:CDS	30.0%
	GATGGAACGATACTTAATTT+AGG	-	Chr3:48597253-48597272	MsG0380013995.01.T01:intron	30.0%
	GGAATAGTTCATAGATCTTT+GGG	-	Chr3:48596615-48596634	MsG0380013995.01.T01:intron	30.0%
	GGAGAAGTAAAAAAAAATGC+AGG	-	Chr3:48596563-48596582	MsG0380013995.01.T01:intron	30.0%
	GGATGGGATAAATAACAAAA+TGG	-	Chr3:48597181-48597200	MsG0380013995.01.T01:intron	30.0%
	GGTAACATCAATTAGATATC+CGG	-	Chr3:48597332-48597351	MsG0380013995.01.T01:intron	30.0%
	GGTCTATAAGAATCCATATT+TGG	-	Chr3:48599232-48599251	MsG0380013995.01.T01:intron	30.0%
	GTAATTTCCTAAAATTAGGG+TGG	+	Chr3:48597833-48597852	None:intergenic	30.0%
	GTTAGATATGGATAGCAAAA+AGG	-	Chr3:48599210-48599229	MsG0380013995.01.T01:intron	30.0%
	GTTAGGTCTAAATTCTACAA+TGG	+	Chr3:48598901-48598920	None:intergenic	30.0%
	TAATAGGAAATGAACCATCA+TGG	-	Chr3:48600228-48600247	MsG0380013995.01.T01:intron	30.0%
	TACAGTTCGAACTATTTATG+GGG	-	Chr3:48598209-48598228	MsG0380013995.01.T01:intron	30.0%
	TAGATTCGACAGAATAATAG+AGG	-	Chr3:48597137-48597156	MsG0380013995.01.T01:intron	30.0%
	TTATCTGGATATAAAGAACG+CGG	-	Chr3:48598514-48598533	MsG0380013995.01.T01:intron	30.0%
	TTCTACTATGTAAGGTCTAT+GGG	-	Chr3:48598689-48598708	MsG0380013995.01.T01:CDS	30.0%
	TTTGTAAAGTCTCTATTCCT+TGG	+	Chr3:48596650-48596669	None:intergenic	30.0%
!	ATGTTTGATAGCTTACCTAA+AGG	+	Chr3:48600085-48600104	None:intergenic	30.0%
!	CCCATAGCAATAACATATTT+TGG	+	Chr3:48596083-48596102	None:intergenic	30.0%
!	CCCCAATTTTTATGAAATAC+AGG	-	Chr3:48597021-48597040	MsG0380013995.01.T01:intron	30.0%
!	CTTCCCTAGATTAAACTTTT+TGG	-	Chr3:48597455-48597474	MsG0380013995.01.T01:intron	30.0%
!	GAGAATTCCTTCTATTTTCT+GGG	-	Chr3:48596863-48596882	MsG0380013995.01.T01:intron	30.0%
!	TACTTTTATGCATACCTCTT+CGG	+	Chr3:48596823-48596842	None:intergenic	30.0%
!	TAGAAAGGCTATTTCAATAG+CGG	-	Chr3:48599829-48599848	MsG0380013995.01.T01:intron	30.0%
!	TCAAAAAATCCACATTTTCG+CGG	+	Chr3:48599107-48599126	None:intergenic	30.0%
!	TGTTTGATAGCTTACCTAAA+GGG	+	Chr3:48600084-48600103	None:intergenic	30.0%
!	TTTGTTATCAACGAGAGAAT+AGG	-	Chr3:48596282-48596301	MsG0380013995.01.T01:CDS	30.0%
!!	GAAAAAATTCGAGTTCCTTT+TGG	+	Chr3:48600688-48600707	None:intergenic	30.0%
!!	GTTATCTCTGAAATAGATGA+TGG	+	Chr3:48596386-48596405	None:intergenic	30.0%
!!	TTCCCTGAAAGCATTTAAAT+AGG	+	Chr3:48600038-48600057	None:intergenic	30.0%
!!!	AAAGTGCTGATTTTCAAGAA+AGG	-	Chr3:48596892-48596911	MsG0380013995.01.T01:intron	30.0%
!!!	AAGTGCTGATTTTCAAGAAA+GGG	-	Chr3:48596893-48596912	MsG0380013995.01.T01:intron	30.0%
!!!	ACTTTTTCAGTTCATCCTAT+TGG	+	Chr3:48597284-48597303	None:intergenic	30.0%
!!!	CCTTTCTAGCTATATTTTCT+GGG	+	Chr3:48599817-48599836	None:intergenic	30.0%
!!!	GCAATAACATATTTTGGTTC+GGG	+	Chr3:48596077-48596096	None:intergenic	30.0%
!!!	TACTTTTTCTTTTTCGTAGC+CGG	+	Chr3:48597354-48597373	None:intergenic	30.0%
	AAAAGGATCTCCCGAATATT+GGG	-	Chr3:48599745-48599764	MsG0380013995.01.T01:intron	35.0%
	AACCATAAATCGAAAAGCGA+TGG	-	Chr3:48598918-48598937	MsG0380013995.01.T01:intron	35.0%
	AAGTGAGAAATGGGAAATTC+AGG	-	Chr3:48600357-48600376	MsG0380013995.01.T01:intron	35.0%
	ACATCTAGACAAATAGAAGC+AGG	-	Chr3:48599613-48599632	MsG0380013995.01.T01:intron	35.0%
	ACCATAAATCGAAAAGCGAT+GGG	-	Chr3:48598919-48598938	MsG0380013995.01.T01:intron	35.0%
	ACGAACCACAAATTTCATCT+TGG	-	Chr3:48596314-48596333	MsG0380013995.01.T01:CDS	35.0%
	ACTCATCGCTTAACATTATC+TGG	-	Chr3:48598499-48598518	MsG0380013995.01.T01:intron	35.0%
	AGAGCTAATTATCGAGACTT+TGG	-	Chr3:48600454-48600473	MsG0380013995.01.T01:intron	35.0%
	AGCTATTGAATTAGCTGAAC+AGG	-	Chr3:48598056-48598075	MsG0380013995.01.T01:intron	35.0%
	AGGAGTTCAAGTACAAATTG+CGG	-	Chr3:48598089-48598108	MsG0380013995.01.T01:intron	35.0%
	AGTGAGAAATGGGAAATTCA+GGG	-	Chr3:48600358-48600377	MsG0380013995.01.T01:intron	35.0%
	CATACCGGCAATTATAATCA+AGG	-	Chr3:48596347-48596366	MsG0380013995.01.T01:CDS	35.0%
	CATCTAGACAAATAGAAGCA+GGG	-	Chr3:48599614-48599633	MsG0380013995.01.T01:intron	35.0%
	CCCAGAAAATATAGCTAGAA+AGG	-	Chr3:48599814-48599833	MsG0380013995.01.T01:intron	35.0%
	CCGAACAGTACTATAAGAAT+CGG	+	Chr3:48596138-48596157	None:intergenic	35.0%
	CCGATTCTTATAGTACTGTT+CGG	-	Chr3:48596135-48596154	MsG0380013995.01.T01:CDS	35.0%
	CGAGGTAATACAATTTCCTT+CGG	-	Chr3:48599554-48599573	MsG0380013995.01.T01:intron	35.0%
	CGATTCTTATAGTACTGTTC+GGG	-	Chr3:48596136-48596155	MsG0380013995.01.T01:CDS	35.0%
	CGGAATAGTTCATAGATCTT+TGG	-	Chr3:48596614-48596633	MsG0380013995.01.T01:intron	35.0%
	CTGGATGTAGAAATAGAAGA+AGG	+	Chr3:48600185-48600204	None:intergenic	35.0%
	GATAATGTTAAGCGATGAGT+AGG	+	Chr3:48598499-48598518	None:intergenic	35.0%
	GATGTAGAAATAGAAGAAGG+TGG	+	Chr3:48600182-48600201	None:intergenic	35.0%
	GATTCTTATAGTACTGTTCG+GGG	-	Chr3:48596137-48596156	MsG0380013995.01.T01:CDS	35.0%
	GCAAGAATTTAGAAATCGTG+AGG	+	Chr3:48597979-48597998	None:intergenic	35.0%
	GCGAATCAATAAAACTGAGA+AGG	-	Chr3:48598805-48598824	MsG0380013995.01.T01:intron	35.0%
	GCGATATAATCTTTACGCAA+AGG	+	Chr3:48597002-48597021	None:intergenic	35.0%
	GGAAATTGTATTACCTCGAT+AGG	+	Chr3:48599552-48599571	None:intergenic	35.0%
	GGCTACGAAAAAGAAAAAGT+AGG	-	Chr3:48597353-48597372	MsG0380013995.01.T01:intron	35.0%
	GGGTATTAGGAATCAAAGTT+TGG	-	Chr3:48598229-48598248	MsG0380013995.01.T01:intron	35.0%
	TACTCATAGAAATGAATCGC+CGG	-	Chr3:48597727-48597746	MsG0380013995.01.T01:intron	35.0%
	TATCGAGACTTTGGATTATC+TGG	-	Chr3:48600463-48600482	MsG0380013995.01.T01:intron	35.0%
	TCAGTCCTTAAGTGAGAAAT+GGG	-	Chr3:48600348-48600367	MsG0380013995.01.T01:intron	35.0%
	TGAGGTGAAAATCTCATGTA+CGG	-	Chr3:48599431-48599450	MsG0380013995.01.T01:intron	35.0%
	TTACCTAAAGGGCCTTAAAT+AGG	+	Chr3:48600073-48600092	None:intergenic	35.0%
	TTCCAAACCCAGAAAATAGA+AGG	+	Chr3:48596873-48596892	None:intergenic	35.0%
	TTTAATCTAGGGAAGTTCAG+AGG	+	Chr3:48597450-48597469	None:intergenic	35.0%
!	AAAGTATGATGATAATGCGG+CGG	-	Chr3:48600639-48600658	MsG0380013995.01.T01:CDS	35.0%
!	AAGTCTCGATAATTAGCTCT+CGG	+	Chr3:48600454-48600473	None:intergenic	35.0%
!	ACTTTTATGCATACCTCTTC+GGG	+	Chr3:48596822-48596841	None:intergenic	35.0%
!	AGAAAGATCTGAAGTGATCA+GGG	-	Chr3:48600564-48600583	MsG0380013995.01.T01:CDS	35.0%
!	CAAAAAATCCACATTTTCGC+GGG	+	Chr3:48599106-48599125	None:intergenic	35.0%
!	CAAACTTTTCTTTGCCATGA+TGG	+	Chr3:48600245-48600264	None:intergenic	35.0%
!	CATGAGATTTTCACCTCATA+CGG	+	Chr3:48599429-48599448	None:intergenic	35.0%
!	CGAACTATTTATGGGGTATT+AGG	-	Chr3:48598216-48598235	MsG0380013995.01.T01:intron	35.0%
!	CGAGAATTCCTTCTATTTTC+TGG	-	Chr3:48596862-48596881	MsG0380013995.01.T01:intron	35.0%
!	TAGAAAGATCTGAAGTGATC+AGG	-	Chr3:48600563-48600582	MsG0380013995.01.T01:intron	35.0%
!	TTAATTTAGGGTGAGCCAAT+AGG	-	Chr3:48597266-48597285	MsG0380013995.01.T01:intron	35.0%
!	TTCCTTCTATTTTCTGGGTT+TGG	-	Chr3:48596868-48596887	MsG0380013995.01.T01:intron	35.0%
!	TTCTTCCTCGATGTTGTTTA+CGG	+	Chr3:48599517-48599536	None:intergenic	35.0%
!	TTGAGTTCGTATAGGCATTT+TGG	+	Chr3:48599858-48599877	None:intergenic	35.0%
!	TTTGAATCGATTTATTCGCG+AGG	-	Chr3:48599401-48599420	MsG0380013995.01.T01:intron	35.0%
!!	CTTCTTCTATTTCTACATCC+AGG	-	Chr3:48600183-48600202	MsG0380013995.01.T01:intron	35.0%
!!	GCTCTTGATTTGTCTATTCT+AGG	+	Chr3:48598784-48598803	None:intergenic	35.0%
!!	TACTGATTCATTAGATGGGA+TGG	-	Chr3:48598990-48599009	MsG0380013995.01.T01:intron	35.0%
!!	TCGCTTTTCGATTTATGGTT+AGG	+	Chr3:48598918-48598937	None:intergenic	35.0%
!!	TTCTTTGGGGTTATAGTTGA+TGG	+	Chr3:48599487-48599506	None:intergenic	35.0%
!!	TTTACGGAATCTGGTTCTTT+GGG	+	Chr3:48599501-48599520	None:intergenic	35.0%
!!!	CATTCTTTTTTGAGGAGTTG+TGG	-	Chr3:48599031-48599050	MsG0380013995.01.T01:intron	35.0%
!!!	GCCTTTCTAGCTATATTTTC+TGG	+	Chr3:48599818-48599837	None:intergenic	35.0%
!!!	GTATTTTAATGCCCGAAAGT+TGG	-	Chr3:48596967-48596986	MsG0380013995.01.T01:intron	35.0%
!!!	TCTTTGGGTTTTGATTACCA+AGG	-	Chr3:48596630-48596649	MsG0380013995.01.T01:intron	35.0%
	AACGACAGCTACCCAATATT+CGG	+	Chr3:48599759-48599778	None:intergenic	40.0%
	AAGAAATTGCACGTGTCGAA+TGG	-	Chr3:48598127-48598146	MsG0380013995.01.T01:intron	40.0%
	AATAGTTTCATTAGCACCCG+AGG	-	Chr3:48600747-48600766	MsG0380013995.01.T01:CDS	40.0%
	ACTCATAGAAATGAATCGCC+GGG	-	Chr3:48597728-48597747	MsG0380013995.01.T01:intron	40.0%
	AGATTCCGTAAACAACATCG+AGG	-	Chr3:48599509-48599528	MsG0380013995.01.T01:intron	40.0%
	ATAGCATCTATAACGGCTTC+CGG	+	Chr3:48596215-48596234	None:intergenic	40.0%
	ATGAAAGGAAAAGCCTATCG+AGG	-	Chr3:48599536-48599555	MsG0380013995.01.T01:intron	40.0%
	ATTGAATTAGCTGAACAGGC+AGG	-	Chr3:48598060-48598079	MsG0380013995.01.T01:intron	40.0%
	CAACATCGAGGAAGAATGAA+AGG	-	Chr3:48599521-48599540	MsG0380013995.01.T01:intron	40.0%
	CTCAGTCCTTAAGTGAGAAA+TGG	-	Chr3:48600347-48600366	MsG0380013995.01.T01:intron	40.0%
	CTTACTGTAACAGGTTTGTC+TGG	+	Chr3:48599698-48599717	None:intergenic	40.0%
	CTTCGGAAAATATGCTCTTC+AGG	-	Chr3:48599571-48599590	MsG0380013995.01.T01:intron	40.0%
	GAAAAGGATCTCCCGAATAT+TGG	-	Chr3:48599744-48599763	MsG0380013995.01.T01:intron	40.0%
	GACTTTACAAATAAAGCCCG+AGG	-	Chr3:48596659-48596678	MsG0380013995.01.T01:intron	40.0%
	GCGGTTCTCATTGATAAAGA+AGG	-	Chr3:48600658-48600677	MsG0380013995.01.T01:CDS	40.0%
	GGAGAAGAAGAGGCAAAAAT+TGG	-	Chr3:48600273-48600292	MsG0380013995.01.T01:intron	40.0%
	GGAGTTCAAGTACAAATTGC+GGG	-	Chr3:48598090-48598109	MsG0380013995.01.T01:intron	40.0%
	GTACGGTTCTGTAATAGAGA+TGG	-	Chr3:48599448-48599467	MsG0380013995.01.T01:intron	40.0%
	TACAAATAAAGCCCGAGGAT+TGG	-	Chr3:48596664-48596683	MsG0380013995.01.T01:intron	40.0%
	TAGTTTAGATCAACCCGAAG+AGG	-	Chr3:48596806-48596825	MsG0380013995.01.T01:intron	40.0%
	TGATTCATTAGATGGGATGG+CGG	-	Chr3:48598993-48599012	MsG0380013995.01.T01:intron	40.0%
	TGCGTCCAAGATGAAATTTG+TGG	+	Chr3:48596322-48596341	None:intergenic	40.0%
	TGCTACATCATAGGCACATT+GGG	+	Chr3:48596739-48596758	None:intergenic	40.0%
	TGCTTTCAGGGAAATCCAAA+AGG	-	Chr3:48600045-48600064	MsG0380013995.01.T01:intron	40.0%
	TTAATGCCCGAAAGTTGGAT+AGG	-	Chr3:48596972-48596991	MsG0380013995.01.T01:intron	40.0%
	TTGTCTAGATGTGATCCAAG+CGG	+	Chr3:48599605-48599624	None:intergenic	40.0%
!	AATTCTCGGATTTTGCCTTG+GGG	+	Chr3:48596850-48596869	None:intergenic	40.0%
!	ATAATTAGCTCTCGGTCTTC+CGG	+	Chr3:48600446-48600465	None:intergenic	40.0%
!	GAACCTATTTAAGGCCCTTT+AGG	-	Chr3:48600067-48600086	MsG0380013995.01.T01:intron	40.0%
!	GAATTCTCGGATTTTGCCTT+GGG	+	Chr3:48596851-48596870	None:intergenic	40.0%
!	GGCCTTAAATAGGTTCCTTT+TGG	+	Chr3:48600063-48600082	None:intergenic	40.0%
!	TCGATGTTGTTTACGGAATC+TGG	+	Chr3:48599510-48599529	None:intergenic	40.0%
!	TGACACACCACCCTAATTTT+AGG	-	Chr3:48597823-48597842	MsG0380013995.01.T01:intron	40.0%
!	TTAGCTCGAATGGTTTGTAG+AGG	+	Chr3:48598171-48598190	None:intergenic	40.0%
!!	CGAATGGATTAGAGAAGGTA+GGG	-	Chr3:48598143-48598162	MsG0380013995.01.T01:intron	40.0%
!!	CTGAAGAGCATATTTTCCGA+AGG	+	Chr3:48599573-48599592	None:intergenic	40.0%
!!	GCATAAAAGTATTTGCCCCA+AGG	-	Chr3:48596832-48596851	MsG0380013995.01.T01:intron	40.0%
!!	GTTTACGGAATCTGGTTCTT+TGG	+	Chr3:48599502-48599521	None:intergenic	40.0%
!!	TCCCATCGCTTTTCGATTTA+TGG	+	Chr3:48598923-48598942	None:intergenic	40.0%
!!	TCGAATGGATTAGAGAAGGT+AGG	-	Chr3:48598142-48598161	MsG0380013995.01.T01:intron	40.0%
!!	TTACGGAATCTGGTTCTTTG+GGG	+	Chr3:48599500-48599519	None:intergenic	40.0%
!!!	AGCGGATTAAATGGGCTTTT+GGG	-	Chr3:48597936-48597955	MsG0380013995.01.T01:intron	40.0%
!!!	TAGCGGATTAAATGGGCTTT+TGG	-	Chr3:48597935-48597954	MsG0380013995.01.T01:intron	40.0%
!!!	TTCACTTTTTCGTTTGTCGG+AGG	+	Chr3:48596445-48596464	None:intergenic	40.0%
	AATATTCGCCCGCGAAAATG+TGG	-	Chr3:48599095-48599114	MsG0380013995.01.T01:intron	45.0%
	ACACTAGCTAATAGTCCTCC+TGG	+	Chr3:48596762-48596781	None:intergenic	45.0%
	ACGACAGCTACCCAATATTC+GGG	+	Chr3:48599758-48599777	None:intergenic	45.0%
	AGATTTGAACTGGTGACACG+AGG	-	Chr3:48597755-48597774	MsG0380013995.01.T01:intron	45.0%
	AGCAATCGAATGCCAATCCT+CGG	+	Chr3:48596679-48596698	None:intergenic	45.0%
	AGGCCATCCTATCCAACTTT+CGG	+	Chr3:48596982-48597001	None:intergenic	45.0%
	ATGCTTAGTGTGTGACTCGT+TGG	-	Chr3:48598412-48598431	MsG0380013995.01.T01:intron	45.0%
	ATGGGAGCCTGTACAATTAC+AGG	-	Chr3:48596098-48596117	MsG0380013995.01.T01:CDS	45.0%
	CAATGATAGAAGTCGGATCC+TGG	+	Chr3:48600204-48600223	None:intergenic	45.0%
	CATCCCTCCTGTAATTGTAC+AGG	+	Chr3:48596108-48596127	None:intergenic	45.0%
	CGTGGATAAGCTAATTCCTG+TGG	-	Chr3:48596160-48596179	MsG0380013995.01.T01:CDS	45.0%
	GAGCCTGTACAATTACAGGA+GGG	-	Chr3:48596102-48596121	MsG0380013995.01.T01:CDS	45.0%
	GTGCTACATCATAGGCACAT+TGG	+	Chr3:48596740-48596759	None:intergenic	45.0%
	TCGGTAGGTCTTACTGTAAC+AGG	+	Chr3:48599707-48599726	None:intergenic	45.0%
	TCGTGTCACCAGTTCAAATC+TGG	+	Chr3:48597756-48597775	None:intergenic	45.0%
	TCTATAACGGCTTCCGGTTT+AGG	+	Chr3:48596209-48596228	None:intergenic	45.0%
	TCTCAATTCTCGGGCTATTG+CGG	+	Chr3:48600710-48600729	None:intergenic	45.0%
	TGATTGAGAGGGAGAAGAAG+AGG	-	Chr3:48600263-48600282	MsG0380013995.01.T01:intron	45.0%
	TTAGGGTGGTGTGTCAAGAA+TGG	+	Chr3:48597819-48597838	None:intergenic	45.0%
!	ACCAGTTCAAATCTGGTTCC+CGG	+	Chr3:48597749-48597768	None:intergenic	45.0%
!	GGAATTCTCGGATTTTGCCT+TGG	+	Chr3:48596852-48596871	None:intergenic	45.0%
!	GTACCCATATTTTCCCACCT+CGG	+	Chr3:48599667-48599686	None:intergenic	45.0%
!	TCTGCTTGGCTAGTCAAACA+CGG	-	Chr3:48596594-48596613	MsG0380013995.01.T01:intron	45.0%
!	TTTTCAGTCCTCTGCTCTAC+CGG	-	Chr3:48597779-48597798	MsG0380013995.01.T01:intron	45.0%
!!	AAATGGGCTTTTGGGGATAG+AGG	-	Chr3:48597944-48597963	MsG0380013995.01.T01:intron	45.0%
!!	AATGGGCTTTTGGGGATAGA+GGG	-	Chr3:48597945-48597964	MsG0380013995.01.T01:intron	45.0%
!!	CGTGTCGAATGGATTAGAGA+AGG	-	Chr3:48598138-48598157	MsG0380013995.01.T01:intron	45.0%
!!	GCGGATTAAATGGGCTTTTG+GGG	-	Chr3:48597937-48597956	MsG0380013995.01.T01:intron	45.0%
!!!	AATTTAAAATTAAATTTGTT+TGG	-	Chr3:48599369-48599388	MsG0380013995.01.T01:intron	5.0%
!!!	TGAATTTTAATTAAAAAAAA+GGG	-	Chr3:48597896-48597915	MsG0380013995.01.T01:intron	5.0%
!!!	TTGAATTTTAATTAAAAAAA+AGG	-	Chr3:48597895-48597914	MsG0380013995.01.T01:intron	5.0%
	AAGACCTACCGAAACGCGTA+TGG	-	Chr3:48599715-48599734	MsG0380013995.01.T01:intron	50.0%
	ACAAATAGAAGCAGGGCGAC+GGG	-	Chr3:48599621-48599640	MsG0380013995.01.T01:intron	50.0%
	ACGAAAATGTTCGCCGAGGT+GGG	-	Chr3:48599651-48599670	MsG0380013995.01.T01:intron	50.0%
	AGACCTACCGAAACGCGTAT+GGG	-	Chr3:48599716-48599735	MsG0380013995.01.T01:intron	50.0%
	ATAACGGCTTCCGGTTTAGG+TGG	+	Chr3:48596206-48596225	None:intergenic	50.0%
	CAAATTGCGGGACGTATCGA+CGG	-	Chr3:48598102-48598121	MsG0380013995.01.T01:intron	50.0%
	CCTGGCAAATAGACATCCAC+AGG	+	Chr3:48596179-48596198	None:intergenic	50.0%
	CCTGTGGATGTCTATTTGCC+AGG	-	Chr3:48596176-48596195	MsG0380013995.01.T01:CDS	50.0%
	CGTGTAGGTGCACTATTACG+CGG	+	Chr3:48600400-48600419	None:intergenic	50.0%
	CTTGGACGCAGTACTCATAC+CGG	-	Chr3:48596332-48596351	MsG0380013995.01.T01:CDS	50.0%
	GACAAATAGAAGCAGGGCGA+CGG	-	Chr3:48599620-48599639	MsG0380013995.01.T01:intron	50.0%
	GCAATCGAATGCCAATCCTC+GGG	+	Chr3:48596678-48596697	None:intergenic	50.0%
	GCTGAACAGGCAGGTACAAA+AGG	-	Chr3:48598069-48598088	MsG0380013995.01.T01:intron	50.0%
	GGAGCCTGTACAATTACAGG+AGG	-	Chr3:48596101-48596120	MsG0380013995.01.T01:CDS	50.0%
	GGCCATCCTATCCAACTTTC+GGG	+	Chr3:48596981-48597000	None:intergenic	50.0%
	GGTGGTGTGTCAAGAATGGT+CGG	+	Chr3:48597815-48597834	None:intergenic	50.0%
	GTGGTGTGTCAAGAATGGTC+GGG	+	Chr3:48597814-48597833	None:intergenic	50.0%
	TACCGAAACGCGTATGGGTT+CGG	-	Chr3:48599721-48599740	MsG0380013995.01.T01:intron	50.0%
	TCGAAAAGCGATGGGAACGA+TGG	-	Chr3:48598927-48598946	MsG0380013995.01.T01:intron	50.0%
	TCGCCGAGGTGGGAAAATAT+GGG	-	Chr3:48599661-48599680	MsG0380013995.01.T01:intron	50.0%
	TGCAGGGTCATTTGTCTGCT+TGG	-	Chr3:48596580-48596599	MsG0380013995.01.T01:intron	50.0%
	TGCCCGAAAGTTGGATAGGA+TGG	-	Chr3:48596976-48596995	MsG0380013995.01.T01:intron	50.0%
	TGGGTAGCTGTCGTTAAACC+CGG	-	Chr3:48599764-48599783	MsG0380013995.01.T01:intron	50.0%
	TGTCACGAAAATGTTCGCCG+AGG	-	Chr3:48599647-48599666	MsG0380013995.01.T01:intron	50.0%
	TGTGCCTATGATGTAGCACC+AGG	-	Chr3:48596741-48596760	MsG0380013995.01.T01:intron	50.0%
	TTATAGTACTGTTCGGGGCG+TGG	-	Chr3:48596142-48596161	MsG0380013995.01.T01:CDS	50.0%
	TTCGCCGAGGTGGGAAAATA+TGG	-	Chr3:48599660-48599679	MsG0380013995.01.T01:intron	50.0%
!	TATCTGGGGTTGTCGAAGTG+CGG	+	Chr3:48597080-48597099	None:intergenic	50.0%
!!	TCATTAGATGGGATGGCGGA+CGG	-	Chr3:48598997-48599016	MsG0380013995.01.T01:intron	50.0%
!!	TCCTCCTGGTGCTACATCAT+AGG	+	Chr3:48596748-48596767	None:intergenic	50.0%
!!!	CGTCGACGTTGTTTTTCGAC+CGG	-	Chr3:48600424-48600443	MsG0380013995.01.T01:intron	50.0%
	AATGGTCGGGATAGCTCAGC+CGG	+	Chr3:48597801-48597820	None:intergenic	55.0%
	ACCGAAACGCGTATGGGTTC+GGG	-	Chr3:48599722-48599741	MsG0380013995.01.T01:intron	55.0%
	ACGCGTATGGGTTCGGGAAA+AGG	-	Chr3:48599728-48599747	MsG0380013995.01.T01:intron	55.0%
	CAACGTCGACGAAGACGTGT+AGG	+	Chr3:48600415-48600434	None:intergenic	55.0%
	CACGAAAATGTTCGCCGAGG+TGG	-	Chr3:48599650-48599669	MsG0380013995.01.T01:intron	55.0%
	GAACCCATACGCGTTTCGGT+AGG	+	Chr3:48599722-48599741	None:intergenic	55.0%
	GCCGGGAACCAGATTTGAAC+TGG	-	Chr3:48597745-48597764	MsG0380013995.01.T01:intron	55.0%
	GCCTATGATGTAGCACCAGG+AGG	-	Chr3:48596744-48596763	MsG0380013995.01.T01:intron	55.0%
	TATTCGCGAGGAGCCGTATG+AGG	-	Chr3:48599413-48599432	MsG0380013995.01.T01:intron	55.0%
	TCCCGAACCCATACGCGTTT+CGG	+	Chr3:48599726-48599745	None:intergenic	55.0%
	CTTCAGGCACTTGAGCCGCT+TGG	-	Chr3:48599587-48599606	MsG0380013995.01.T01:intron	60.0%
	GCCAGGCTGTCCACCTAAAC+CGG	-	Chr3:48596193-48596212	MsG0380013995.01.T01:CDS	60.0%
	TAGCTCAGCCGGTAGAGCAG+AGG	+	Chr3:48597790-48597809	None:intergenic	60.0%
	TCCGGTTTAGGTGGACAGCC+TGG	+	Chr3:48596197-48596216	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	48596032	48600777	48596032	ID=MsG0380013995.01;Name=MsG0380013995.01
Chr3	mRNA	48596032	48600777	48596032	ID=MsG0380013995.01.T01;Parent=MsG0380013995.01;Name=MsG0380013995.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|1\|1\|3\|0\|280
Chr3	exon	48600564	48600777	48600564	ID=MsG0380013995.01.T01:exon:9238;Parent=MsG0380013995.01.T01
Chr3	exon	48598579	48598808	48598579	ID=MsG0380013995.01.T01:exon:9237;Parent=MsG0380013995.01.T01
Chr3	exon	48596032	48596430	48596032	ID=MsG0380013995.01.T01:exon:9236;Parent=MsG0380013995.01.T01
Chr3	CDS	48600564	48600777	48600564	ID=MsG0380013995.01.T01:cds;Parent=MsG0380013995.01.T01
Chr3	CDS	48598579	48598808	48598579	ID=MsG0380013995.01.T01:cds;Parent=MsG0380013995.01.T01
Chr3	CDS	48596032	48596430	48596032	ID=MsG0380013995.01.T01:cds;Parent=MsG0380013995.01.T01

Gene Sequence

>MsG0380013995.01.T01

ATGAAAATGGCTCCTTCTTTAGTTCGATTATATGAGCAAATGCCCGAACCAAAATATGTTATTGCTATGGGAGCCTGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGCGTGGATAAGCTAATTCCTGTGGATGTCTATTTGCCAGGCTGTCCACCTAAACCGGAAGCCGTTATAGATGCTATAACAAAACTTCAATTTATAGCTGGACAATTAAAGAATAGAATTTCGTTTAGGAAAGCAATCAAAAAAGCTATTGAATTAGCTGAACAGGCAGGTACAAAAGGAGTTCAAGTACAAATTGCGGGACGTATCGACGGAAAAGAAATTGCACGTGTCGAATGGATTAGAGAAGGTAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTCCTATACAGTTCGAACTATTTATGGGGGAAAGTTAGAAGCACTACCGCGTAATAGTGCACCTACACGTCTTCGTCGACGTTGTTTTTCGACCGGAAGACCGAGAGCTAATTATCGAGACTTTGGATTATCTGGACACATACTTCGTGAAATTGTTGACATTGTTGACATTGTTGTTGCTGTAATCAAAAAAGCAGTACCAAATTCATCTTTAGAAAGATCTGAAGTGATCAGGGCTGTAATTGTACGTACTTGTAAAGAACTAAAACGTAGTAATGGTATAATAATAAAGTATGATGATAATGCGGCGGTTCTCATTGATAAAGAAGGAAATCCAAAAGGAACTCGAATTTTTTCCGCAATAGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCCGAGGTATTATAA

Protein sequence

>MsG0380013995.01.T01

MKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLQFIAGQLKNRISFRKAIKKAIELAEQAGTKGVQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGGKLEALPRNSAPTRLRRRCFSTGRPRANYRDFGLSGHILREIVDIVDIVVAVIKKAVPNSSLERSEVIRAVIVRTCKELKRSNGIIIKYDDNAAVLIDKEGNPKGTRIFSAIARELRQLNFTKIVSLAPEVL*