Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013972.01.T01 | YP_009642736.1 | 100 | 126 | 0 | 0 | 1 | 126 | 268 | 393 | 7.26E-82 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013972.01.T01 | B5LMS0 | 99.206 | 126 | 1 | 0 | 1 | 126 | 268 | 393 | 2.40E-84 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013972.01.T01 | A0A4P8F4K5 | 100.000 | 126 | 0 | 0 | 1 | 126 | 268 | 393 | 3.47e-82 | 255 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048689.01 | MsG0380013972.01 | 0.837074 | 6.441847e-57 | 8.274545e-54 |
| MsG0080048690.01 | MsG0380013972.01 | 0.824118 | 9.597729e-54 | 8.423858e-51 |
| MsG0080048691.01 | MsG0380013972.01 | 0.829232 | 5.775926e-55 | 5.876249e-52 |
| MsG0080048692.01 | MsG0380013972.01 | 0.854766 | 9.888188e-62 | 2.232405e-58 |
| MsG0080048698.01 | MsG0380013972.01 | 0.911170 | 8.231360e-83 | 1.741862e-78 |
| MsG0080048699.01 | MsG0380013972.01 | 0.889740 | 1.847404e-73 | 1.509405e-69 |
| MsG0080049076.01 | MsG0380013972.01 | 0.806317 | 8.724221e-50 | 4.720599e-47 |
| MsG0180002226.01 | MsG0380013972.01 | 0.852427 | 4.649003e-61 | 9.710932e-58 |
| MsG0180002435.01 | MsG0380013972.01 | 0.817468 | 3.246529e-52 | 2.366395e-49 |
| MsG0180003624.01 | MsG0380013972.01 | 0.810465 | 1.137521e-50 | 6.861622e-48 |
| MsG0180004301.01 | MsG0380013972.01 | 0.802756 | 4.822722e-49 | 2.381692e-46 |
| MsG0180004434.01 | MsG0380013972.01 | 0.822717 | 2.040579e-53 | 1.721605e-50 |
| MsG0180004435.01 | MsG0380013972.01 | 0.804607 | 1.991335e-49 | 1.031222e-46 |
| MsG0180004505.01 | MsG0380013972.01 | 0.809764 | 1.610407e-50 | 9.537941e-48 |
| MsG0380013448.01 | MsG0380013972.01 | 0.864353 | 1.292806e-64 | 4.046897e-61 |
| MsG0380013887.01 | MsG0380013972.01 | 0.801521 | 8.657035e-49 | 4.143013e-46 |
| MsG0380013888.01 | MsG0380013972.01 | 0.878799 | 2.095679e-69 | 1.109001e-65 |
| MsG0380013889.01 | MsG0380013972.01 | 0.832211 | 1.075932e-55 | 1.194452e-52 |
| MsG0380013915.01 | MsG0380013972.01 | 0.802442 | 5.599145e-49 | 2.743061e-46 |
| MsG0380013916.01 | MsG0380013972.01 | 0.892119 | 2.128303e-74 | 1.918632e-70 |
| MsG0380013917.01 | MsG0380013972.01 | 0.919491 | 4.210671e-87 | 1.356135e-82 |
| MsG0380013918.01 | MsG0380013972.01 | 0.875959 | 2.041996e-68 | 9.724730e-65 |
| MsG0380013919.01 | MsG0380013972.01 | 0.826517 | 2.597155e-54 | 2.441065e-51 |
| MsG0380013920.01 | MsG0380013972.01 | 0.887456 | 1.404021e-72 | 1.044885e-68 |
| MsG0380013923.01 | MsG0380013972.01 | 0.877314 | 6.941450e-69 | 3.474955e-65 |
| MsG0380013926.01 | MsG0380013972.01 | 0.891871 | 2.672807e-74 | 2.385047e-70 |
| MsG0380013929.01 | MsG0380013972.01 | 0.886305 | 3.837887e-72 | 2.726419e-68 |
| MsG0380013931.01 | MsG0380013972.01 | 0.932057 | 1.507052e-94 | 9.890294e-90 |
| MsG0380013932.01 | MsG0380013972.01 | 0.910951 | 1.053149e-82 | 2.206279e-78 |
| MsG0380013935.01 | MsG0380013972.01 | 0.809054 | 2.286892e-50 | 1.328997e-47 |
| MsG0380013940.01 | MsG0380013972.01 | 0.825326 | 4.981328e-54 | 4.526212e-51 |
| MsG0380013941.01 | MsG0380013972.01 | 0.894461 | 2.413869e-75 | 2.402481e-71 |
| MsG0380013942.01 | MsG0380013972.01 | 0.919599 | 3.680072e-87 | 1.191057e-82 |
| MsG0380013943.01 | MsG0380013972.01 | 0.842850 | 2.010099e-58 | 3.087044e-55 |
| MsG0380013944.01 | MsG0380013972.01 | 0.914046 | 3.031586e-84 | 7.387466e-80 |
| MsG0380013945.01 | MsG0380013972.01 | 0.838189 | 3.333622e-57 | 4.430939e-54 |
| MsG0380013947.01 | MsG0380013972.01 | 0.828502 | 8.676338e-55 | 8.640148e-52 |
| MsG0380013948.01 | MsG0380013972.01 | 0.891473 | 3.847819e-74 | 3.378521e-70 |
| MsG0380013949.01 | MsG0380013972.01 | 0.840228 | 9.864420e-58 | 1.396113e-54 |
| MsG0380013950.01 | MsG0380013972.01 | 0.846428 | 2.185026e-59 | 3.760124e-56 |
| MsG0380013951.01 | MsG0380013972.01 | 0.922437 | 9.849858e-89 | 3.724054e-84 |
| MsG0380013952.01 | MsG0380013972.01 | 0.934707 | 2.659527e-96 | 2.047819e-91 |
| MsG0380013953.01 | MsG0380013972.01 | 0.818667 | 1.739417e-52 | 1.310216e-49 |
| MsG0380013956.01 | MsG0380013972.01 | 0.806604 | 7.589587e-50 | 4.136825e-47 |
| MsG0380013957.01 | MsG0380013972.01 | 0.824786 | 6.682319e-54 | 5.979061e-51 |
| MsG0380013959.01 | MsG0380013972.01 | 0.862536 | 4.729287e-64 | 1.389694e-60 |
| MsG0380013961.01 | MsG0380013972.01 | 0.833211 | 6.076246e-56 | 6.950440e-53 |
| MsG0380013962.01 | MsG0380013972.01 | 0.829536 | 4.873544e-55 | 5.002037e-52 |
| MsG0380013963.01 | MsG0380013972.01 | 0.808549 | 2.932063e-50 | 1.681392e-47 |
| MsG0380013964.01 | MsG0380013972.01 | 0.849796 | 2.569428e-60 | 4.927872e-57 |
| MsG0380013966.01 | MsG0380013972.01 | 0.891285 | 4.566249e-74 | 3.978496e-70 |
| MsG0380013967.01 | MsG0380013972.01 | 0.827514 | 1.499731e-54 | 1.451026e-51 |
| MsG0380013968.01 | MsG0380013972.01 | 0.914100 | 2.846688e-84 | 6.957602e-80 |
| MsG0380013969.01 | MsG0380013972.01 | 0.938486 | 6.217039e-99 | 6.018960e-94 |
| MsG0380013971.01 | MsG0380013972.01 | 0.824012 | 1.016392e-53 | 8.893949e-51 |
| MsG0380013972.01 | MsG0380013975.01 | 0.800884 | 1.168903e-48 | 5.504885e-46 |
| MsG0380013972.01 | MsG0380013977.01 | 0.832871 | 7.381367e-56 | 8.357661e-53 |
| MsG0380013972.01 | MsG0380013978.01 | 0.851621 | 7.878131e-61 | 1.603942e-57 |
| MsG0380013972.01 | MsG0380013979.01 | 0.829267 | 5.664311e-55 | 5.769068e-52 |
| MsG0380013972.01 | MsG0380013980.01 | 0.822130 | 2.793122e-53 | 2.317381e-50 |
| MsG0380013972.01 | MsG0380013981.01 | 0.932139 | 1.332808e-94 | 8.783247e-90 |
| MsG0380013972.01 | MsG0380013983.01 | 0.876687 | 1.145465e-68 | 5.604711e-65 |
| MsG0380013972.01 | MsG0380013995.01 | 0.918751 | 1.058463e-86 | 3.277488e-82 |
| MsG0380013972.01 | MsG0380013999.01 | 0.815404 | 9.408704e-52 | 6.480681e-49 |
| MsG0380013972.01 | MsG0380014004.01 | 0.835333 | 1.783559e-56 | 2.174384e-53 |
| MsG0380013972.01 | MsG0380014005.01 | 0.836510 | 8.968755e-57 | 1.132663e-53 |
| MsG0380013972.01 | MsG0380014006.01 | 0.813205 | 2.880382e-51 | 1.868988e-48 |
| MsG0380013972.01 | MsG0380014008.01 | 0.917569 | 4.523412e-86 | 1.314218e-81 |
| MsG0380013972.01 | MsG0380014009.01 | 0.848481 | 5.965278e-60 | 1.096372e-56 |
| MsG0380013972.01 | MsG0380014011.01 | 0.865155 | 7.247906e-65 | 2.334628e-61 |
| MsG0380013972.01 | MsG0380014017.01 | 0.816577 | 5.147957e-52 | 3.661629e-49 |
| MsG0380013972.01 | MsG0380014018.01 | 0.870061 | 1.938828e-66 | 7.440577e-63 |
| MsG0380013972.01 | MsG0380014020.01 | 0.808626 | 2.823874e-50 | 1.622476e-47 |
| MsG0380013972.01 | MsG0380014021.01 | 0.800013 | 1.758626e-48 | 8.100634e-46 |
| MsG0380013972.01 | MsG0380014023.01 | 0.869238 | 3.595744e-66 | 1.339679e-62 |
| MsG0380013972.01 | MsG0380014026.01 | 0.882557 | 9.423857e-71 | 5.766047e-67 |
| MsG0380013972.01 | MsG0380014027.01 | 0.816827 | 4.523946e-52 | 3.239878e-49 |
| MsG0380013972.01 | MsG0380014028.01 | 0.819416 | 1.174966e-52 | 9.036121e-50 |
| MsG0380013972.01 | MsG0380014030.01 | 0.842620 | 2.313206e-58 | 3.527161e-55 |
| MsG0380013972.01 | MsG0380014032.01 | 0.844466 | 7.429342e-59 | 1.200440e-55 |
| MsG0380013972.01 | MsG0380014033.01 | 0.866353 | 3.033934e-65 | 1.019531e-61 |
| MsG0380013972.01 | MsG0380014034.01 | 0.877851 | 4.511054e-69 | 2.303273e-65 |
| MsG0380013972.01 | MsG0380014035.01 | 0.850874 | 1.280173e-60 | 2.543738e-57 |
| MsG0380013972.01 | MsG0380014036.01 | 0.915630 | 4.686582e-85 | 1.236683e-80 |
| MsG0380013972.01 | MsG0380014039.01 | 0.901705 | 2.043908e-78 | 2.795166e-74 |
| MsG0380013972.01 | MsG0380014040.01 | 0.912919 | 1.121463e-83 | 2.584062e-79 |
| MsG0380013972.01 | MsG0380014041.01 | 0.853142 | 2.905592e-61 | 6.215235e-58 |
| MsG0380013972.01 | MsG0380014044.01 | 0.884800 | 1.407342e-71 | 9.416457e-68 |
| MsG0380013972.01 | MsG0380014050.01 | 0.822374 | 2.450802e-53 | 2.047759e-50 |
| MsG0380013972.01 | MsG0380014051.01 | 0.917559 | 4.582299e-86 | 1.331100e-81 |
| MsG0380013972.01 | MsG0380014055.01 | 0.846934 | 1.589848e-59 | 2.780379e-56 |
| MsG0380013972.01 | MsG0380014057.01 | 0.899276 | 2.325111e-77 | 2.854491e-73 |
| MsG0380013972.01 | MsG0380017006.01 | 0.839635 | 1.408523e-57 | 1.956901e-54 |
| MsG0380013972.01 | MsG0380017007.01 | 0.935035 | 1.595398e-96 | 1.255609e-91 |
| MsG0380013972.01 | MsG0480018296.01 | 0.875235 | 3.615589e-68 | 1.676004e-64 |
| MsG0380013972.01 | MsG0580027677.01 | 0.839828 | 1.254357e-57 | 1.753176e-54 |
| MsG0380013972.01 | MsG0680032339.01 | 0.807263 | 5.506399e-50 | 3.053081e-47 |
| MsG0380013972.01 | MsG0780038197.01 | 0.816114 | 6.532892e-52 | 4.588432e-49 |
| MsG0380013972.01 | MsG0780040316.01 | 0.882668 | 8.588281e-71 | 5.276306e-67 |
| MsG0380013972.01 | MsG0780040317.01 | 0.855145 | 7.678831e-62 | 1.755412e-58 |
| MsG0380013972.01 | MsG0880043541.01 | 0.811240 | 7.728694e-51 | 4.759112e-48 |
| MsG0380013972.01 | MsG0880044440.01 | 0.871437 | 6.838860e-67 | 2.759196e-63 |
| MsG0380013972.01 | MsG0880045630.01 | 0.811544 | 6.638026e-51 | 4.120600e-48 |
| MsG0280007042.01 | MsG0380013972.01 | 0.864044 | 1.613908e-64 | 4.997035e-61 |
| MsG0280009971.01 | MsG0380013972.01 | -0.816813 | 4.558258e-52 | 3.263131e-49 |
| MsG0280010137.01 | MsG0380013972.01 | 0.816651 | 4.954453e-52 | 3.531273e-49 |
| MsG0280010145.01 | MsG0380013972.01 | 0.899501 | 1.862595e-77 | 2.309777e-73 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013972.01.T01 | MTR_6g042200 | 96.639 | 119 | 4 | 0 | 1 | 119 | 268 | 386 | 6.69e-75 | 235 |
| MsG0380013972.01.T01 | MTR_4g006100 | 97.479 | 119 | 3 | 0 | 1 | 119 | 268 | 386 | 8.77e-75 | 238 |
| MsG0380013972.01.T01 | MTR_0002s0150 | 78.992 | 119 | 25 | 0 | 1 | 119 | 299 | 417 | 2.16e-62 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013972.01.T01 | ATCG01110 | 90.476 | 126 | 12 | 0 | 1 | 126 | 268 | 393 | 5.17e-77 | 233 |
| MsG0380013972.01.T01 | ATMG00510 | 37.594 | 133 | 70 | 3 | 1 | 126 | 268 | 394 | 4.05e-18 | 79.0 |
Find 21 sgRNAs with CRISPR-Local
Find 40 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGTTAAAAGAATGAAAT+TGG | 0.240964 | 3:+48543755 | MsG0380013972.01.T01:CDS |
| TAAAATTATTCAACAGGCTT+TGG | 0.308807 | 3:+48543470 | MsG0380013972.01.T01:CDS |
| TCTCACATAAAGTTCTTGTT+TGG | 0.322955 | 3:-48543619 | None:intergenic |
| ATCCATTAAAATTATTCAAC+AGG | 0.326815 | 3:+48543464 | MsG0380013972.01.T01:CDS |
| TATTCAAAATCATTCCATTC+TGG | 0.326932 | 3:-48543555 | None:intergenic |
| AGGTAGCATAGATATCATTA+TGG | 0.351209 | 3:+48543797 | MsG0380013972.01.T01:CDS |
| CAGGCTTTGGAAGGAATTCC+AGG | 0.354309 | 3:+48543483 | MsG0380013972.01.T01:CDS |
| CTCACATAAAGTTCTTGTTT+GGG | 0.400339 | 3:-48543618 | None:intergenic |
| GGTAGCATAGATATCATTAT+GGG | 0.462662 | 3:+48543798 | MsG0380013972.01.T01:CDS |
| TCGCTCCTTTGATAGAGAAA+AGG | 0.480513 | 3:+48543530 | MsG0380013972.01.T01:CDS |
| GCTGATATTATGACAATACT+AGG | 0.522631 | 3:+48543777 | MsG0380013972.01.T01:CDS |
| ATAGAGAAAAGGAGCCAGAA+TGG | 0.528576 | 3:+48543541 | MsG0380013972.01.T01:CDS |
| AGATGGAAAATTCGTCCACC+TGG | 0.529045 | 3:+48543705 | MsG0380013972.01.T01:CDS |
| ATTATTCAACAGGCTTTGGA+AGG | 0.539344 | 3:+48543474 | MsG0380013972.01.T01:CDS |
| TGTTTGGGCAATTCAAAAGT+CGG | 0.557531 | 3:-48543603 | None:intergenic |
| TTTCTAATAGGAGATCAGAA+TGG | 0.560048 | 3:+48543672 | MsG0380013972.01.T01:CDS |
| ATTTGCAAATTGATAAAACC+AGG | 0.570420 | 3:-48543723 | None:intergenic |
| AGAACTTTATGTGAGAGTTG+AGG | 0.641734 | 3:+48543626 | MsG0380013972.01.T01:CDS |
| CTTTGGAAGGAATTCCAGGT+GGG | 0.666113 | 3:+48543487 | MsG0380013972.01.T01:CDS |
| TGCAAATTGATAAAACCAGG+TGG | 0.677686 | 3:-48543720 | None:intergenic |
| GCTTTGGAAGGAATTCCAGG+TGG | 0.694925 | 3:+48543486 | MsG0380013972.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGTTAAAAGAATGAAAT+TGG | + | Chr3:48543755-48543774 | MsG0380013972.01.T01:CDS | 15.0% |
| !! | ATCCATTAAAATTATTCAAC+AGG | + | Chr3:48543464-48543483 | MsG0380013972.01.T01:CDS | 20.0% |
| !!! | CGAATTTCTAAATTTTCATA+TGG | - | Chr3:48543513-48543532 | None:intergenic | 20.0% |
| !!! | GAATTAGGAATTTTTCTAAT+AGG | + | Chr3:48543660-48543679 | MsG0380013972.01.T01:CDS | 20.0% |
| !!! | TTCATTCTTTTAACTAATTG+AGG | - | Chr3:48543753-48543772 | None:intergenic | 20.0% |
| ! | ATTTGCAAATTGATAAAACC+AGG | - | Chr3:48543726-48543745 | None:intergenic | 25.0% |
| ! | TAAAATTATTCAACAGGCTT+TGG | + | Chr3:48543470-48543489 | MsG0380013972.01.T01:CDS | 25.0% |
| ! | TATTCAAAATCATTCCATTC+TGG | - | Chr3:48543558-48543577 | None:intergenic | 25.0% |
| !! | AGCCTGTTGAATAATTTTAA+TGG | - | Chr3:48543469-48543488 | None:intergenic | 25.0% |
| !!! | GATTTTGAATATCGATTCAT+TGG | + | Chr3:48543567-48543586 | MsG0380013972.01.T01:CDS | 25.0% |
| AGGTAGCATAGATATCATTA+TGG | + | Chr3:48543797-48543816 | MsG0380013972.01.T01:CDS | 30.0% | |
| GCTGATATTATGACAATACT+AGG | + | Chr3:48543777-48543796 | MsG0380013972.01.T01:CDS | 30.0% | |
| GGTAGCATAGATATCATTAT+GGG | + | Chr3:48543798-48543817 | MsG0380013972.01.T01:CDS | 30.0% | |
| TCTCACATAAAGTTCTTGTT+TGG | - | Chr3:48543622-48543641 | None:intergenic | 30.0% | |
| TTTCTAATAGGAGATCAGAA+TGG | + | Chr3:48543672-48543691 | MsG0380013972.01.T01:CDS | 30.0% | |
| ! | CTCACATAAAGTTCTTGTTT+GGG | - | Chr3:48543621-48543640 | None:intergenic | 30.0% |
| AAAAATTCCTAATTCCCCCT+TGG | - | Chr3:48543655-48543674 | None:intergenic | 35.0% | |
| AAAATTCCTAATTCCCCCTT+GGG | - | Chr3:48543654-48543673 | None:intergenic | 35.0% | |
| AGAACTTTATGTGAGAGTTG+AGG | + | Chr3:48543626-48543645 | MsG0380013972.01.T01:CDS | 35.0% | |
| TGCAAATTGATAAAACCAGG+TGG | - | Chr3:48543723-48543742 | None:intergenic | 35.0% | |
| TGTTTGGGCAATTCAAAAGT+CGG | - | Chr3:48543606-48543625 | None:intergenic | 35.0% | |
| !! | ATTATTCAACAGGCTTTGGA+AGG | + | Chr3:48543474-48543493 | MsG0380013972.01.T01:CDS | 35.0% |
| AAATTCCTAATTCCCCCTTG+GGG | - | Chr3:48543653-48543672 | None:intergenic | 40.0% | |
| ATAGAGAAAAGGAGCCAGAA+TGG | + | Chr3:48543541-48543560 | MsG0380013972.01.T01:CDS | 40.0% | |
| TCGCTCCTTTGATAGAGAAA+AGG | + | Chr3:48543530-48543549 | MsG0380013972.01.T01:CDS | 40.0% | |
| ! | AAATTTTCATATGGCCCACC+TGG | - | Chr3:48543504-48543523 | None:intergenic | 40.0% |
| ! | AGAATGGTTTTCCTTGGAGA+TGG | + | Chr3:48543688-48543707 | MsG0380013972.01.T01:CDS | 40.0% |
| ! | GAGATCAGAATGGTTTTCCT+TGG | + | Chr3:48543682-48543701 | MsG0380013972.01.T01:CDS | 40.0% |
| ! | TGGCTCCTTTTCTCTATCAA+AGG | - | Chr3:48543538-48543557 | None:intergenic | 40.0% |
| AATTCCTAATTCCCCCTTGG+GGG | - | Chr3:48543652-48543671 | None:intergenic | 45.0% | |
| AGATGGAAAATTCGTCCACC+TGG | + | Chr3:48543705-48543724 | MsG0380013972.01.T01:CDS | 45.0% | |
| ! | CTTTGGAAGGAATTCCAGGT+GGG | + | Chr3:48543487-48543506 | MsG0380013972.01.T01:CDS | 45.0% |
| ! | GGACGAATTTTCCATCTCCA+AGG | - | Chr3:48543702-48543721 | None:intergenic | 45.0% |
| !! | CAGGCTTTGGAAGGAATTCC+AGG | + | Chr3:48543483-48543502 | MsG0380013972.01.T01:CDS | 50.0% |
| !! | GCTTTGGAAGGAATTCCAGG+TGG | + | Chr3:48543486-48543505 | MsG0380013972.01.T01:CDS | 50.0% |
| GTGAGAGTTGAGGCCCCCAA+GGG | + | Chr3:48543636-48543655 | MsG0380013972.01.T01:CDS | 60.0% | |
| TGAGAGTTGAGGCCCCCAAG+GGG | + | Chr3:48543637-48543656 | MsG0380013972.01.T01:CDS | 60.0% | |
| TGTGAGAGTTGAGGCCCCCA+AGG | + | Chr3:48543635-48543654 | MsG0380013972.01.T01:CDS | 60.0% | |
| GAGAGTTGAGGCCCCCAAGG+GGG | + | Chr3:48543638-48543657 | MsG0380013972.01.T01:CDS | 65.0% | |
| GAGGCCCCCAAGGGGGAATT+AGG | + | Chr3:48543645-48543664 | MsG0380013972.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 48543456 | 48543836 | 48543456 | ID=MsG0380013972.01;Name=MsG0380013972.01 |
| Chr3 | mRNA | 48543456 | 48543836 | 48543456 | ID=MsG0380013972.01.T01;Parent=MsG0380013972.01;Name=MsG0380013972.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|126 |
| Chr3 | exon | 48543456 | 48543836 | 48543456 | ID=MsG0380013972.01.T01:exon:8493;Parent=MsG0380013972.01.T01 |
| Chr3 | CDS | 48543456 | 48543836 | 48543456 | ID=MsG0380013972.01.T01:cds;Parent=MsG0380013972.01.T01 |
| Gene Sequence |
| Protein sequence |
