Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014051.01.T01 | YP_009656865.1 | 100 | 193 | 0 | 0 | 1 | 193 | 1 | 193 | 3.33E-138 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014051.01.T01 | B5LMS0 | 98.446 | 193 | 3 | 0 | 1 | 193 | 1 | 193 | 2.98E-139 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014051.01.T01 | A0A4P8F2L1 | 100.000 | 193 | 0 | 0 | 1 | 193 | 1 | 193 | 1.59e-138 | 404 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0380014051.01 | 0.829179 | 5.950744e-55 | 6.044588e-52 |
| MsG0080048059.01 | MsG0380014051.01 | 0.801608 | 8.310431e-49 | 3.985650e-46 |
| MsG0080048560.01 | MsG0380014051.01 | 0.817421 | 3.325946e-52 | 2.421133e-49 |
| MsG0080048690.01 | MsG0380014051.01 | 0.848358 | 6.451017e-60 | 1.180776e-56 |
| MsG0080048691.01 | MsG0380014051.01 | 0.829443 | 5.134325e-55 | 5.255396e-52 |
| MsG0080048692.01 | MsG0380014051.01 | 0.903272 | 4.115856e-79 | 6.049755e-75 |
| MsG0080048693.01 | MsG0380014051.01 | 0.828310 | 9.655122e-55 | 9.560582e-52 |
| MsG0080048694.01 | MsG0380014051.01 | 0.850149 | 2.046695e-60 | 3.971308e-57 |
| MsG0080048695.01 | MsG0380014051.01 | 0.849712 | 2.712060e-60 | 5.186981e-57 |
| MsG0080048697.01 | MsG0380014051.01 | 0.819411 | 1.178282e-52 | 9.060147e-50 |
| MsG0080048698.01 | MsG0380014051.01 | 0.927350 | 1.328907e-91 | 6.600141e-87 |
| MsG0080048699.01 | MsG0380014051.01 | 0.937964 | 1.468413e-98 | 1.373511e-93 |
| MsG0080048813.01 | MsG0380014051.01 | 0.861795 | 7.982119e-64 | 2.285443e-60 |
| MsG0080049076.01 | MsG0380014051.01 | 0.868069 | 8.585474e-66 | 3.064883e-62 |
| MsG0180001072.01 | MsG0380014051.01 | 0.844996 | 5.347321e-59 | 8.786223e-56 |
| MsG0180001925.01 | MsG0380014051.01 | 0.841462 | 4.682868e-58 | 6.886313e-55 |
| MsG0180002226.01 | MsG0380014051.01 | 0.821710 | 3.493940e-53 | 2.864381e-50 |
| MsG0180002439.01 | MsG0380014051.01 | 0.827055 | 1.932249e-54 | 1.844583e-51 |
| MsG0180002546.01 | MsG0380014051.01 | 0.807779 | 4.278091e-50 | 2.404063e-47 |
| MsG0180004301.01 | MsG0380014051.01 | 0.832937 | 7.109198e-56 | 8.065196e-53 |
| MsG0180004434.01 | MsG0380014051.01 | 0.821152 | 4.699678e-53 | 3.793213e-50 |
| MsG0180004435.01 | MsG0380014051.01 | 0.838533 | 2.718549e-57 | 3.651673e-54 |
| MsG0180005791.01 | MsG0380014051.01 | 0.867245 | 1.577248e-65 | 5.468715e-62 |
| MsG0280010695.01 | MsG0380014051.01 | 0.801662 | 8.100571e-49 | 3.890360e-46 |
| MsG0280010780.01 | MsG0380014051.01 | 0.816257 | 6.071754e-52 | 4.281250e-49 |
| MsG0380013448.01 | MsG0380014051.01 | 0.896102 | 5.091086e-76 | 5.427496e-72 |
| MsG0380013888.01 | MsG0380014051.01 | 0.871301 | 7.586609e-67 | 3.045249e-63 |
| MsG0380013889.01 | MsG0380014051.01 | 0.811866 | 5.650146e-51 | 3.537228e-48 |
| MsG0380013892.01 | MsG0380014051.01 | 0.838194 | 3.324199e-57 | 4.419062e-54 |
| MsG0380013914.01 | MsG0380014051.01 | 0.804764 | 1.846951e-49 | 9.603791e-47 |
| MsG0380013916.01 | MsG0380014051.01 | 0.869094 | 4.004363e-66 | 1.483925e-62 |
| MsG0380013917.01 | MsG0380014051.01 | 0.898522 | 4.888299e-77 | 5.798437e-73 |
| MsG0380013918.01 | MsG0380014051.01 | 0.839554 | 1.478296e-57 | 2.048547e-54 |
| MsG0380013919.01 | MsG0380014051.01 | 0.839432 | 1.590076e-57 | 2.195574e-54 |
| MsG0380013920.01 | MsG0380014051.01 | 0.866919 | 2.004566e-65 | 6.872175e-62 |
| MsG0380013921.01 | MsG0380014051.01 | 0.833156 | 6.269760e-56 | 7.159832e-53 |
| MsG0380013923.01 | MsG0380014051.01 | 0.912528 | 1.756309e-83 | 3.968317e-79 |
| MsG0380013926.01 | MsG0380014051.01 | 0.894820 | 1.720820e-75 | 1.739001e-71 |
| MsG0380013928.01 | MsG0380014051.01 | 0.844150 | 9.035582e-59 | 1.445673e-55 |
| MsG0380013929.01 | MsG0380014051.01 | 0.920348 | 1.434058e-87 | 4.837792e-83 |
| MsG0380013931.01 | MsG0380014051.01 | 0.936175 | 2.640225e-97 | 2.217565e-92 |
| MsG0380013932.01 | MsG0380014051.01 | 0.893738 | 4.753022e-75 | 4.587542e-71 |
| MsG0380013935.01 | MsG0380014051.01 | 0.807924 | 3.985067e-50 | 2.247839e-47 |
| MsG0380013940.01 | MsG0380014051.01 | 0.871969 | 4.556630e-67 | 1.873490e-63 |
| MsG0380013941.01 | MsG0380014051.01 | 0.903871 | 2.216130e-79 | 3.341509e-75 |
| MsG0380013942.01 | MsG0380014051.01 | 0.949916 | 4.809348e-108 | 9.886685e-103 |
| MsG0380013943.01 | MsG0380014051.01 | 0.886952 | 2.184397e-72 | 1.592900e-68 |
| MsG0380013944.01 | MsG0380014051.01 | 0.910153 | 2.574760e-82 | 5.188808e-78 |
| MsG0380013945.01 | MsG0380014051.01 | 0.880444 | 5.464174e-70 | 3.080051e-66 |
| MsG0380013947.01 | MsG0380014051.01 | 0.803724 | 3.041472e-49 | 1.539644e-46 |
| MsG0380013948.01 | MsG0380014051.01 | 0.854087 | 1.554793e-61 | 3.433003e-58 |
| MsG0380013950.01 | MsG0380014051.01 | 0.855286 | 6.985894e-62 | 1.604759e-58 |
| MsG0380013951.01 | MsG0380014051.01 | 0.939569 | 1.020075e-99 | 1.058256e-94 |
| MsG0380013952.01 | MsG0380014051.01 | 0.912306 | 2.264802e-83 | 5.063720e-79 |
| MsG0380013953.01 | MsG0380014051.01 | 0.873241 | 1.712987e-67 | 7.381456e-64 |
| MsG0380013954.01 | MsG0380014051.01 | 0.808762 | 2.641360e-50 | 1.523059e-47 |
| MsG0380013956.01 | MsG0380014051.01 | 0.851652 | 7.717790e-61 | 1.572837e-57 |
| MsG0380013957.01 | MsG0380014051.01 | 0.873424 | 1.485920e-67 | 6.445775e-64 |
| MsG0380013961.01 | MsG0380014051.01 | 0.820121 | 8.108807e-53 | 6.360796e-50 |
| MsG0380013962.01 | MsG0380014051.01 | 0.834517 | 2.862583e-56 | 3.405452e-53 |
| MsG0380013964.01 | MsG0380014051.01 | 0.836190 | 1.081746e-56 | 1.353352e-53 |
| MsG0380013966.01 | MsG0380014051.01 | 0.926304 | 5.634540e-91 | 2.637551e-86 |
| MsG0380013967.01 | MsG0380014051.01 | 0.875428 | 3.104778e-68 | 1.448949e-64 |
| MsG0380013968.01 | MsG0380014051.01 | 0.941346 | 4.880789e-101 | 5.679724e-96 |
| MsG0380013969.01 | MsG0380014051.01 | 0.913892 | 3.629715e-84 | 8.776739e-80 |
| MsG0380013971.01 | MsG0380014051.01 | 0.871723 | 5.498729e-67 | 2.241025e-63 |
| MsG0380013972.01 | MsG0380014051.01 | 0.917559 | 4.582299e-86 | 1.331100e-81 |
| MsG0380013975.01 | MsG0380014051.01 | 0.850942 | 1.225135e-60 | 2.440009e-57 |
| MsG0380013977.01 | MsG0380014051.01 | 0.876773 | 1.069052e-68 | 5.248049e-65 |
| MsG0380013978.01 | MsG0380014051.01 | 0.841875 | 3.644444e-58 | 5.428581e-55 |
| MsG0380013980.01 | MsG0380014051.01 | 0.806647 | 7.430651e-50 | 4.054512e-47 |
| MsG0380013981.01 | MsG0380014051.01 | 0.891580 | 3.490180e-74 | 3.078097e-70 |
| MsG0380013983.01 | MsG0380014051.01 | 0.842961 | 1.878041e-58 | 2.894179e-55 |
| MsG0380013985.01 | MsG0380014051.01 | 0.810248 | 1.266955e-50 | 7.598861e-48 |
| MsG0380013986.01 | MsG0380014051.01 | 0.826208 | 3.078147e-54 | 2.867880e-51 |
| MsG0380013995.01 | MsG0380014051.01 | 0.919046 | 7.339223e-87 | 2.308307e-82 |
| MsG0380013997.01 | MsG0380014051.01 | 0.837642 | 4.607697e-57 | 6.023753e-54 |
| MsG0380013999.01 | MsG0380014051.01 | 0.824291 | 8.741232e-54 | 7.709401e-51 |
| MsG0380014004.01 | MsG0380014051.01 | 0.869157 | 3.820452e-66 | 1.419245e-62 |
| MsG0380014005.01 | MsG0380014051.01 | 0.887715 | 1.118123e-72 | 8.410294e-69 |
| MsG0380014006.01 | MsG0380014051.01 | 0.868606 | 5.763074e-66 | 2.097532e-62 |
| MsG0380014008.01 | MsG0380014051.01 | 0.908047 | 2.618630e-81 | 4.772187e-77 |
| MsG0380014011.01 | MsG0380014051.01 | 0.812724 | 3.671406e-51 | 2.352032e-48 |
| MsG0380014016.01 | MsG0380014051.01 | 0.827947 | 1.180666e-54 | 1.156856e-51 |
| MsG0380014017.01 | MsG0380014051.01 | 0.820122 | 8.102183e-53 | 6.355805e-50 |
| MsG0380014018.01 | MsG0380014051.01 | 0.923034 | 4.516511e-89 | 1.767877e-84 |
| MsG0380014020.01 | MsG0380014051.01 | 0.866757 | 2.257267e-65 | 7.695077e-62 |
| MsG0380014021.01 | MsG0380014051.01 | 0.827602 | 1.428617e-54 | 1.385656e-51 |
| MsG0380014023.01 | MsG0380014051.01 | 0.919092 | 6.930330e-87 | 2.185365e-82 |
| MsG0380014024.01 | MsG0380014051.01 | 0.803663 | 3.131391e-49 | 1.582656e-46 |
| MsG0380014026.01 | MsG0380014051.01 | 0.903469 | 3.360892e-79 | 4.981743e-75 |
| MsG0380014029.01 | MsG0380014051.01 | 0.844521 | 7.179819e-59 | 1.162185e-55 |
| MsG0380014030.01 | MsG0380014051.01 | 0.839491 | 1.534879e-57 | 2.123148e-54 |
| MsG0380014032.01 | MsG0380014051.01 | 0.887969 | 8.941749e-73 | 6.795197e-69 |
| MsG0380014033.01 | MsG0380014051.01 | 0.907954 | 2.897556e-81 | 5.259916e-77 |
| MsG0380014034.01 | MsG0380014051.01 | 0.842474 | 2.529311e-58 | 3.839830e-55 |
| MsG0380014036.01 | MsG0380014051.01 | 0.896191 | 4.674981e-76 | 5.003433e-72 |
| MsG0380014039.01 | MsG0380014051.01 | 0.910862 | 1.164542e-82 | 2.427076e-78 |
| MsG0380014040.01 | MsG0380014051.01 | 0.911626 | 4.913852e-83 | 1.062253e-78 |
| MsG0380014044.01 | MsG0380014051.01 | 0.838636 | 2.556642e-57 | 3.445295e-54 |
| MsG0380014050.01 | MsG0380014051.01 | 0.834112 | 3.617607e-56 | 4.251309e-53 |
| MsG0380014051.01 | MsG0380014057.01 | 0.879092 | 1.651792e-69 | 8.840535e-66 |
| MsG0380014051.01 | MsG0380014129.01 | 0.822678 | 2.083655e-53 | 1.756010e-50 |
| MsG0380014051.01 | MsG0380015348.01 | 0.854468 | 1.206133e-61 | 2.696372e-58 |
| MsG0380014051.01 | MsG0380016424.01 | 0.814469 | 1.516183e-51 | 1.018263e-48 |
| MsG0380014051.01 | MsG0380016492.01 | 0.806448 | 8.184362e-50 | 4.443485e-47 |
| MsG0380014051.01 | MsG0380017006.01 | 0.847613 | 1.034864e-59 | 1.849669e-56 |
| MsG0380014051.01 | MsG0380017007.01 | 0.950152 | 2.968538e-108 | 6.195070e-103 |
| MsG0380014051.01 | MsG0380017405.01 | 0.826185 | 3.116614e-54 | 2.901859e-51 |
| MsG0380014051.01 | MsG0380017406.01 | 0.803586 | 3.247516e-49 | 1.638255e-46 |
| MsG0380014051.01 | MsG0480018296.01 | 0.921137 | 5.259741e-88 | 1.848106e-83 |
| MsG0380014051.01 | MsG0480019028.01 | 0.812182 | 4.821233e-51 | 3.044371e-48 |
| MsG0380014051.01 | MsG0480020052.01 | 0.848069 | 7.750229e-60 | 1.405194e-56 |
| MsG0380014051.01 | MsG0480021327.01 | 0.829259 | 5.688743e-55 | 5.792554e-52 |
| MsG0380014051.01 | MsG0480021331.01 | 0.844099 | 9.321246e-59 | 1.489033e-55 |
| MsG0380014051.01 | MsG0480022591.01 | 0.834312 | 3.223347e-56 | 3.811038e-53 |
| MsG0380014051.01 | MsG0480023006.01 | 0.807684 | 4.483013e-50 | 2.512927e-47 |
| MsG0380014051.01 | MsG0480023344.01 | 0.834034 | 3.785045e-56 | 4.437584e-53 |
| MsG0380014051.01 | MsG0480023577.01 | 0.802024 | 6.827446e-49 | 3.309270e-46 |
| MsG0380014051.01 | MsG0580024570.01 | 0.802656 | 5.059250e-49 | 2.491970e-46 |
| MsG0380014051.01 | MsG0580025649.01 | 0.817430 | 3.310641e-52 | 2.410567e-49 |
| MsG0380014051.01 | MsG0580027677.01 | 0.880105 | 7.219585e-70 | 4.016853e-66 |
| MsG0380014051.01 | MsG0680030439.01 | 0.831414 | 1.691894e-55 | 1.834674e-52 |
| MsG0380014051.01 | MsG0780038047.01 | 0.813484 | 2.500769e-51 | 1.635217e-48 |
| MsG0380014051.01 | MsG0780038197.01 | 0.889934 | 1.551562e-73 | 1.277774e-69 |
| MsG0380014051.01 | MsG0780040316.01 | 0.846348 | 2.298934e-59 | 3.945308e-56 |
| MsG0380014051.01 | MsG0780040317.01 | 0.820319 | 7.305541e-53 | 5.761363e-50 |
| MsG0380014051.01 | MsG0780041121.01 | 0.810018 | 1.420241e-50 | 8.467803e-48 |
| MsG0380014051.01 | MsG0780041296.01 | 0.813311 | 2.729850e-51 | 1.776535e-48 |
| MsG0380014051.01 | MsG0780041618.01 | 0.800593 | 1.340282e-48 | 6.265188e-46 |
| MsG0380014051.01 | MsG0880042291.01 | 0.856646 | 2.794680e-62 | 6.715706e-59 |
| MsG0380014051.01 | MsG0880043069.01 | 0.807973 | 3.890483e-50 | 2.197390e-47 |
| MsG0380014051.01 | MsG0880044440.01 | 0.831032 | 2.100334e-55 | 2.251850e-52 |
| MsG0380014051.01 | MsG0880045188.01 | 0.813490 | 2.493657e-51 | 1.630818e-48 |
| MsG0380014051.01 | MsG0880045385.01 | 0.804612 | 1.987364e-49 | 1.029278e-46 |
| MsG0380014051.01 | MsG0880045630.01 | 0.878100 | 3.689131e-69 | 1.901564e-65 |
| MsG0380014051.01 | MsG0880046469.01 | 0.814830 | 1.261811e-51 | 8.556440e-49 |
| MsG0280007042.01 | MsG0380014051.01 | 0.816803 | 4.580282e-52 | 3.278007e-49 |
| MsG0280009971.01 | MsG0380014051.01 | -0.848993 | 4.299729e-60 | 8.034750e-57 |
| MsG0280010137.01 | MsG0380014051.01 | 0.825947 | 3.550125e-54 | 3.283355e-51 |
| MsG0280010142.01 | MsG0380014051.01 | 0.838122 | 3.469479e-57 | 4.601961e-54 |
| MsG0280010145.01 | MsG0380014051.01 | 0.943553 | 9.780807e-103 | 1.327463e-97 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014051.01.T01 | MTR_6g042200 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 1.13e-138 | 405 |
| MsG0380014051.01.T01 | MTR_4g006100 | 100.000 | 193 | 0 | 0 | 1 | 193 | 1 | 193 | 1.33e-136 | 406 |
| MsG0380014051.01.T01 | MTR_2g451380 | 100.000 | 149 | 0 | 0 | 1 | 149 | 1 | 149 | 1.30e-107 | 308 |
| MsG0380014051.01.T01 | MTR_0002s0150 | 90.323 | 124 | 12 | 0 | 70 | 193 | 101 | 224 | 4.23e-77 | 244 |
| MsG0380014051.01.T01 | MTR_7g021700 | 100.000 | 97 | 0 | 0 | 1 | 97 | 1 | 97 | 8.38e-63 | 207 |
| MsG0380014051.01.T01 | MTR_4g117480 | 94.286 | 70 | 4 | 0 | 15 | 84 | 1 | 70 | 6.53e-43 | 142 |
| MsG0380014051.01.T01 | MTR_1g099540 | 89.394 | 66 | 7 | 0 | 128 | 193 | 3 | 68 | 3.26e-38 | 128 |
| MsG0380014051.01.T01 | MTR_4g098830 | 57.576 | 66 | 28 | 0 | 184 | 249 | 121 | 186 | 2.25e-16 | 75.1 |
| MsG0380014051.01.T01 | MTR_6g011030 | 60.345 | 58 | 17 | 2 | 137 | 194 | 33 | 84 | 6.39e-16 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014051.01.T01 | ATCG01110 | 92.228 | 193 | 15 | 0 | 1 | 193 | 1 | 193 | 1.78e-132 | 379 |
| MsG0380014051.01.T01 | ATMG00510 | 43.575 | 179 | 101 | 0 | 14 | 192 | 14 | 192 | 1.46e-46 | 159 |
| MsG0380014051.01.T01 | ATCG00210 | 96.552 | 29 | 1 | 0 | 221 | 249 | 1 | 29 | 3.46e-11 | 57.0 |
Find 54 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCCTTTCCCTTGTAGTA+TGG | 0.237735 | 3:-48732192 | MsG0380014051.01.T01:CDS |
| TCTTGCTTGGGCTGGTTTAA+TGG | 0.280565 | 3:-48732227 | MsG0380014051.01.T01:CDS |
| AGACCTCATGATAGTCAATA+TGG | 0.289557 | 3:-48734781 | MsG0380014051.01.T01:CDS |
| TATTGATTGTGAACCAATAT+TGG | 0.291835 | 3:-48734694 | MsG0380014051.01.T01:CDS |
| TTAATTCCCCATTCATTTCA+TGG | 0.307096 | 3:-48734186 | MsG0380014051.01.T01:intron |
| ACAGAAGCAATAACCGTAAA+TGG | 0.315370 | 3:-48734573 | MsG0380014051.01.T01:CDS |
| CAATTGTTCCGGTCCATTTA+CGG | 0.318728 | 3:+48734560 | None:intergenic |
| CGTAAATGGACCGGAACAAT+TGG | 0.319748 | 3:-48734559 | MsG0380014051.01.T01:CDS |
| CTTGTAGCTGGCACATTCAT+AGG | 0.328374 | 3:+48734807 | None:intergenic |
| CTGTGTAAATAACCCAATAT+TGG | 0.346800 | 3:+48734681 | None:intergenic |
| TGAATATTTCCCAATTGTTC+CGG | 0.368041 | 3:+48734549 | None:intergenic |
| GCACCAATATCTGCCATAAA+AGG | 0.383520 | 3:+48734447 | None:intergenic |
| ATTGATTGTGAACCAATATT+GGG | 0.384432 | 3:-48734693 | MsG0380014051.01.T01:CDS |
| TTCCCTTTCCCTTGTAGTAT+GGG | 0.388916 | 3:-48732191 | MsG0380014051.01.T01:CDS |
| AAATGAATGGGGAATTAATT+CGG | 0.398243 | 3:+48734191 | None:intergenic |
| CGAAGAACACCATGCATTGA+TGG | 0.409727 | 3:+48734747 | None:intergenic |
| GCAGATATTGTATAATTGTT+CGG | 0.421110 | 3:+48734634 | None:intergenic |
| AGCTTCTCATCTACTATGGC+TGG | 0.422896 | 3:-48734472 | MsG0380014051.01.T01:CDS |
| TGAATTGACCATGAAATGAA+TGG | 0.422964 | 3:+48734178 | None:intergenic |
| CGACTTATTGTTACTCTGGA+TGG | 0.439520 | 3:-48734726 | MsG0380014051.01.T01:CDS |
| GCATAGCTTCTCATCTACTA+TGG | 0.439604 | 3:-48734476 | MsG0380014051.01.T01:CDS |
| GTAGCGGCTGATCTACCTTA+TGG | 0.440758 | 3:-48734318 | MsG0380014051.01.T01:CDS |
| TGGATATAGTAAGTCTTGCT+TGG | 0.445707 | 3:-48732240 | MsG0380014051.01.T01:CDS |
| GACCTCATGATAGTCAATAT+GGG | 0.456260 | 3:-48734780 | MsG0380014051.01.T01:CDS |
| CACTTCTTCCCCATACTACA+AGG | 0.465275 | 3:+48732182 | None:intergenic |
| GAATTGACCATGAAATGAAT+GGG | 0.471591 | 3:+48734179 | None:intergenic |
| TCTTCGACTTATTGTTACTC+TGG | 0.475804 | 3:-48734730 | MsG0380014051.01.T01:CDS |
| ATAGTAAGTCTTGCTTGGGC+TGG | 0.478250 | 3:-48732235 | MsG0380014051.01.T01:CDS |
| CATAATTACTCGTATATAGC+TGG | 0.480165 | 3:+48734512 | None:intergenic |
| TAATCCCAACGTGTTACATA+AGG | 0.485650 | 3:+48734612 | None:intergenic |
| GGGTTATTTACACAGAGGTA+TGG | 0.494293 | 3:-48734673 | MsG0380014051.01.T01:CDS |
| TCTGCCTTATGTAACACGTT+GGG | 0.505724 | 3:-48734616 | MsG0380014051.01.T01:CDS |
| GGATATAGTAAGTCTTGCTT+GGG | 0.513339 | 3:-48732239 | MsG0380014051.01.T01:CDS |
| TCCCTTTCCCTTGTAGTATG+GGG | 0.516726 | 3:-48732190 | MsG0380014051.01.T01:CDS |
| TCCCCATACTACAAGGGAAA+GGG | 0.521757 | 3:+48732189 | None:intergenic |
| GTAAATGGACCGGAACAATT+GGG | 0.525773 | 3:-48734558 | MsG0380014051.01.T01:CDS |
| CATTTATCTATCCAACCATA+AGG | 0.536061 | 3:+48734303 | None:intergenic |
| GATCTATTTGAAGCTGCGAC+AGG | 0.538812 | 3:-48734378 | MsG0380014051.01.T01:CDS |
| CGGCTGATCTACCTTATGGT+TGG | 0.543311 | 3:-48734314 | MsG0380014051.01.T01:CDS |
| AGCAATAACCGTAAATGGAC+CGG | 0.546967 | 3:-48734568 | MsG0380014051.01.T01:CDS |
| GATAGGAGACAAAATTTACA+TGG | 0.562562 | 3:-48732260 | MsG0380014051.01.T01:CDS |
| GAAGAACACCATGCATTGAT+GGG | 0.574286 | 3:+48734748 | None:intergenic |
| CTTGTAGTATGGGGAAGAAG+TGG | 0.574403 | 3:-48732181 | MsG0380014051.01.T01:CDS |
| ATCTGCCTTATGTAACACGT+TGG | 0.575287 | 3:-48734617 | MsG0380014051.01.T01:CDS |
| CTATATACGAGTAATTATGT+TGG | 0.584312 | 3:-48734508 | MsG0380014051.01.T01:CDS |
| GCTTCTCATCTACTATGGCT+GGG | 0.589546 | 3:-48734471 | MsG0380014051.01.T01:CDS |
| TTCCCCATACTACAAGGGAA+AGG | 0.600131 | 3:+48732188 | None:intergenic |
| CCATGCATTGATGGGTGTTG+AGG | 0.621910 | 3:+48734756 | None:intergenic |
| CCTCAACACCCATCAATGCA+TGG | 0.624983 | 3:-48734756 | MsG0380014051.01.T01:CDS |
| ACCTCATGATAGTCAATATG+GGG | 0.641753 | 3:-48734779 | MsG0380014051.01.T01:CDS |
| GCCCCATATTGACTATCATG+AGG | 0.669971 | 3:+48734778 | None:intergenic |
| AATTGACCATGAAATGAATG+GGG | 0.674188 | 3:+48734180 | None:intergenic |
| ACTTCTTCCCCATACTACAA+GGG | 0.696293 | 3:+48732183 | None:intergenic |
| ATATTGGGTTATTTACACAG+AGG | 0.748960 | 3:-48734678 | MsG0380014051.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATCTTATAATAATAG+TGG | + | Chr3:48734615-48734634 | None:intergenic | 10.0% |
| !! | TAATCTATTTAATGAAAAAT+TGG | - | Chr3:48733203-48733222 | MsG0380014051.01.T01:intron | 10.0% |
| !!! | TCTATTTTTTTGTATTATTT+TGG | - | Chr3:48733647-48733666 | MsG0380014051.01.T01:intron | 10.0% |
| !! | TTTCATTAATCTAACTAATA+TGG | + | Chr3:48734134-48734153 | None:intergenic | 15.0% |
| !!! | AAAATTTTTCTGTTCAAATT+AGG | - | Chr3:48732823-48732842 | MsG0380014051.01.T01:intron | 15.0% |
| !!! | AAGATTTGTATTTTTTTATG+CGG | + | Chr3:48732762-48732781 | None:intergenic | 15.0% |
| !!! | ATATAATTCCATTTTAAGTT+AGG | - | Chr3:48734041-48734060 | MsG0380014051.01.T01:intron | 15.0% |
| !!! | ATTTGTTTTCAATAGAAAAA+GGG | - | Chr3:48733530-48733549 | MsG0380014051.01.T01:intron | 15.0% |
| !!! | TATAATTCCATTTTAAGTTA+GGG | - | Chr3:48734042-48734061 | MsG0380014051.01.T01:intron | 15.0% |
| !!! | TCTCTAAAAATATAGAAAAA+GGG | + | Chr3:48732564-48732583 | None:intergenic | 15.0% |
| !!! | TTCTCTAAAAATATAGAAAA+AGG | + | Chr3:48732565-48732584 | None:intergenic | 15.0% |
| !!! | TTGCAATTATTTTTTAACAA+GGG | - | Chr3:48732707-48732726 | MsG0380014051.01.T01:intron | 15.0% |
| !!! | TTTGCAATTATTTTTTAACA+AGG | - | Chr3:48732706-48732725 | MsG0380014051.01.T01:intron | 15.0% |
| !! | ATTATGTCTTTAACGTATAA+TGG | + | Chr3:48732876-48732895 | None:intergenic | 20.0% |
| !! | TACAATAGTAGTGAAATAAA+AGG | + | Chr3:48733963-48733982 | None:intergenic | 20.0% |
| !! | TACTAGAGATTAGAAAAAAA+TGG | + | Chr3:48734234-48734253 | None:intergenic | 20.0% |
| !! | TCTAAAAATATAGAAAAAGG+GGG | + | Chr3:48732562-48732581 | None:intergenic | 20.0% |
| !! | TGTTATAATTGAAATAGAGA+AGG | - | Chr3:48733328-48733347 | MsG0380014051.01.T01:intron | 20.0% |
| !! | TTACACATACCTATATTATA+GGG | + | Chr3:48733264-48733283 | None:intergenic | 20.0% |
| !!! | AAAATGGATTCTTTTTGAAT+TGG | + | Chr3:48734218-48734237 | None:intergenic | 20.0% |
| !!! | AAATCCTGAATTCATTTTTT+GGG | + | Chr3:48732941-48732960 | None:intergenic | 20.0% |
| !!! | ATGCATAATTATTTTCGTAT+TGG | - | Chr3:48732633-48732652 | MsG0380014051.01.T01:intron | 20.0% |
| !!! | CATTTGTTTTCAATAGAAAA+AGG | - | Chr3:48733529-48733548 | MsG0380014051.01.T01:intron | 20.0% |
| !!! | CTCTAAAAATATAGAAAAAG+GGG | + | Chr3:48732563-48732582 | None:intergenic | 20.0% |
| !!! | TATTTTTGACTGAATGAAAT+GGG | - | Chr3:48734383-48734402 | MsG0380014051.01.T01:CDS | 20.0% |
| !!! | TTAAGATTCAAGAATTTTTC+AGG | - | Chr3:48733434-48733453 | MsG0380014051.01.T01:intron | 20.0% |
| !!! | TTATTTTTGACTGAATGAAA+TGG | - | Chr3:48734382-48734401 | MsG0380014051.01.T01:CDS | 20.0% |
| !!! | TTTGTTTTCAATAGAAAAAG+GGG | - | Chr3:48733531-48733550 | MsG0380014051.01.T01:intron | 20.0% |
| !!! | TTTTTGATATCTTTATCTCA+TGG | + | Chr3:48732972-48732991 | None:intergenic | 20.0% |
| ! | AAAAAGGGGATTAAAGAAAA+CGG | - | Chr3:48733545-48733564 | MsG0380014051.01.T01:intron | 25.0% |
| ! | AAACCTTGTATACAAACTTA+TGG | - | Chr3:48734079-48734098 | MsG0380014051.01.T01:intron | 25.0% |
| ! | AAATGAATGGGGAATTAATT+CGG | + | Chr3:48732790-48732809 | None:intergenic | 25.0% |
| ! | AATTCATTAGAGAGATGAAA+AGG | - | Chr3:48733912-48733931 | MsG0380014051.01.T01:intron | 25.0% |
| ! | AATTGTTGTATAGAACGAAT+CGG | - | Chr3:48734278-48734297 | MsG0380014051.01.T01:CDS | 25.0% |
| ! | ATTGATTGTGAACCAATATT+GGG | - | Chr3:48732285-48732304 | MsG0380014051.01.T01:intron | 25.0% |
| ! | CCTCTCAAAAAAACAAAAAT+GGG | + | Chr3:48733611-48733630 | None:intergenic | 25.0% |
| ! | CTATATACGAGTAATTATGT+TGG | - | Chr3:48732470-48732489 | MsG0380014051.01.T01:intron | 25.0% |
| ! | GCAGATATTGTATAATTGTT+CGG | + | Chr3:48732347-48732366 | None:intergenic | 25.0% |
| ! | GTCTTTAATTAGATTGGATA+AGG | - | Chr3:48734002-48734021 | MsG0380014051.01.T01:intron | 25.0% |
| ! | GTTACACATACCTATATTAT+AGG | + | Chr3:48733265-48733284 | None:intergenic | 25.0% |
| ! | TAATTAGATTGGATAAGGAT+AGG | - | Chr3:48734007-48734026 | MsG0380014051.01.T01:intron | 25.0% |
| ! | TCCTCTCAAAAAAACAAAAA+TGG | + | Chr3:48733612-48733631 | None:intergenic | 25.0% |
| ! | TCGAAAATTCCCTATAATAT+AGG | - | Chr3:48733252-48733271 | MsG0380014051.01.T01:intron | 25.0% |
| ! | TTACCATAAGTTTGTATACA+AGG | + | Chr3:48734085-48734104 | None:intergenic | 25.0% |
| ! | TTCTTCATATTGATAGAGAT+AGG | - | Chr3:48734701-48734720 | MsG0380014051.01.T01:CDS | 25.0% |
| ! | TTTCAATTCTACTAGAAATC+AGG | - | Chr3:48734507-48734526 | MsG0380014051.01.T01:CDS | 25.0% |
| ! | TTTCAGGAATTTGTAGTTAA+CGG | - | Chr3:48733450-48733469 | MsG0380014051.01.T01:intron | 25.0% |
| !! | AAATGAATTCAGGATTTGTT+CGG | - | Chr3:48732944-48732963 | MsG0380014051.01.T01:intron | 25.0% |
| !! | CATAATTATTTTCGTATTGG+AGG | - | Chr3:48732636-48732655 | MsG0380014051.01.T01:intron | 25.0% |
| !! | CTCTAGTAAAAGAATTTTAG+AGG | - | Chr3:48734246-48734265 | MsG0380014051.01.T01:CDS | 25.0% |
| !! | TATTGATTGTGAACCAATAT+TGG | - | Chr3:48732284-48732303 | MsG0380014051.01.T01:intron | 25.0% |
| !!! | AACTTGTTAGATGTTCTAAT+TGG | - | Chr3:48734534-48734553 | MsG0380014051.01.T01:CDS | 25.0% |
| !!! | AATCCTGAATTCATTTTTTG+GGG | + | Chr3:48732940-48732959 | None:intergenic | 25.0% |
| !!! | ATTTTTGACTGAATGAAATG+GGG | - | Chr3:48734384-48734403 | MsG0380014051.01.T01:CDS | 25.0% |
| !!! | ATTTTTGTTTTTTTGAGAGG+AGG | - | Chr3:48733611-48733630 | MsG0380014051.01.T01:intron | 25.0% |
| !!! | CAAATCCTGAATTCATTTTT+TGG | + | Chr3:48732942-48732961 | None:intergenic | 25.0% |
| !!! | TTTGTATTATTTTGGCGATA+TGG | - | Chr3:48733655-48733674 | MsG0380014051.01.T01:intron | 25.0% |
| AAATATCCTTGAGAGTAGTA+AGG | + | Chr3:48734464-48734483 | None:intergenic | 30.0% | |
| AATTGACCATGAAATGAATG+GGG | + | Chr3:48732801-48732820 | None:intergenic | 30.0% | |
| ATACCCCAAAAAATGAATTC+AGG | - | Chr3:48732934-48732953 | MsG0380014051.01.T01:intron | 30.0% | |
| ATATTGGGTTATTTACACAG+AGG | - | Chr3:48732300-48732319 | MsG0380014051.01.T01:intron | 30.0% | |
| ATTGTTGTATAGAACGAATC+GGG | - | Chr3:48734279-48734298 | MsG0380014051.01.T01:CDS | 30.0% | |
| CATAATTACTCGTATATAGC+TGG | + | Chr3:48732469-48732488 | None:intergenic | 30.0% | |
| CATTTATCTATCCAACCATA+AGG | + | Chr3:48732678-48732697 | None:intergenic | 30.0% | |
| CTGTGTAAATAACCCAATAT+TGG | + | Chr3:48732300-48732319 | None:intergenic | 30.0% | |
| GAATTGACCATGAAATGAAT+GGG | + | Chr3:48732802-48732821 | None:intergenic | 30.0% | |
| GATAGGAGACAAAATTTACA+TGG | - | Chr3:48734718-48734737 | MsG0380014051.01.T01:CDS | 30.0% | |
| GATTCGTTCTATACAACAAT+TGG | + | Chr3:48734279-48734298 | None:intergenic | 30.0% | |
| TGAATATTTCCCAATTGTTC+CGG | + | Chr3:48732432-48732451 | None:intergenic | 30.0% | |
| TGAATTGACCATGAAATGAA+TGG | + | Chr3:48732803-48732822 | None:intergenic | 30.0% | |
| TGATGCTAAATTCTAAGCAT+CGG | - | Chr3:48733838-48733857 | MsG0380014051.01.T01:intron | 30.0% | |
| TTAATTCCCCATTCATTTCA+TGG | - | Chr3:48732792-48732811 | MsG0380014051.01.T01:intron | 30.0% | |
| TTATTGCAGTCCTATTTGTT+CGG | - | Chr3:48733133-48733152 | MsG0380014051.01.T01:intron | 30.0% | |
| TTTGAATTCTCTTATCGATC+AGG | + | Chr3:48733739-48733758 | None:intergenic | 30.0% | |
| ! | ACTTTTCTTTTGTGACTGAA+AGG | - | Chr3:48733496-48733515 | MsG0380014051.01.T01:intron | 30.0% |
| ! | TATAATAATAGTGGAATCGC+TGG | + | Chr3:48734606-48734625 | None:intergenic | 30.0% |
| ! | TTTGGGGTCTTTAATTAGAT+TGG | - | Chr3:48733996-48734015 | MsG0380014051.01.T01:intron | 30.0% |
| !! | TTTTTGACTGAATGAAATGG+GGG | - | Chr3:48734385-48734404 | MsG0380014051.01.T01:CDS | 30.0% |
| !!! | ATTCCATTTTAAGTTAGGGA+AGG | - | Chr3:48734046-48734065 | MsG0380014051.01.T01:intron | 30.0% |
| !!! | CCCATTTTTGTTTTTTTGAG+AGG | - | Chr3:48733608-48733627 | MsG0380014051.01.T01:intron | 30.0% |
| AACAACGAAAATGCATGTTC+TGG | - | Chr3:48733282-48733301 | MsG0380014051.01.T01:intron | 35.0% | |
| ACAACGAAAATGCATGTTCT+GGG | - | Chr3:48733283-48733302 | MsG0380014051.01.T01:intron | 35.0% | |
| ACACCTTCCCTAACTTAAAA+TGG | + | Chr3:48734052-48734071 | None:intergenic | 35.0% | |
| ACAGAAGCAATAACCGTAAA+TGG | - | Chr3:48732405-48732424 | MsG0380014051.01.T01:intron | 35.0% | |
| ACCTCATGATAGTCAATATG+GGG | - | Chr3:48732199-48732218 | MsG0380014051.01.T01:CDS | 35.0% | |
| AGACCTCATGATAGTCAATA+TGG | - | Chr3:48732197-48732216 | MsG0380014051.01.T01:CDS | 35.0% | |
| CTAATTGGATGTTTCGTCAA+TGG | - | Chr3:48734549-48734568 | MsG0380014051.01.T01:CDS | 35.0% | |
| GACCTCATGATAGTCAATAT+GGG | - | Chr3:48732198-48732217 | MsG0380014051.01.T01:CDS | 35.0% | |
| GATGCTAAATTCTAAGCATC+GGG | - | Chr3:48733839-48733858 | MsG0380014051.01.T01:intron | 35.0% | |
| GGAAATGCATCGTACTAATT+AGG | + | Chr3:48734443-48734462 | None:intergenic | 35.0% | |
| GGATATAGTAAGTCTTGCTT+GGG | - | Chr3:48734739-48734758 | MsG0380014051.01.T01:CDS | 35.0% | |
| TAATCCCAACGTGTTACATA+AGG | + | Chr3:48732369-48732388 | None:intergenic | 35.0% | |
| TAGATTGGATAAGGATAGGT+CGG | - | Chr3:48734011-48734030 | MsG0380014051.01.T01:intron | 35.0% | |
| TATTGCAGTCCTATTTGTTC+GGG | - | Chr3:48733134-48733153 | MsG0380014051.01.T01:intron | 35.0% | |
| TCTTCGACTTATTGTTACTC+TGG | - | Chr3:48732248-48732267 | MsG0380014051.01.T01:CDS | 35.0% | |
| TGGATATAGTAAGTCTTGCT+TGG | - | Chr3:48734738-48734757 | MsG0380014051.01.T01:CDS | 35.0% | |
| TTAAAGACCCCAAAAGTAGA+TGG | + | Chr3:48733990-48734009 | None:intergenic | 35.0% | |
| TTGCAGTGCATAAAAAGACT+TGG | - | Chr3:48733051-48733070 | MsG0380014051.01.T01:intron | 35.0% | |
| ! | CAGAGGTATGGAAAAAATTG+CGG | - | Chr3:48732317-48732336 | MsG0380014051.01.T01:intron | 35.0% |
| ! | TTGTAGTGTCCATCTACTTT+TGG | - | Chr3:48733978-48733997 | MsG0380014051.01.T01:intron | 35.0% |
| !! | CTTTTGTGACTGAAAGGTAT+AGG | - | Chr3:48733502-48733521 | MsG0380014051.01.T01:intron | 35.0% |
| !! | TGTAGTGTCCATCTACTTTT+GGG | - | Chr3:48733979-48733998 | MsG0380014051.01.T01:intron | 35.0% |
| !! | TTTCGTCAATGGTGTTATGA+CGG | - | Chr3:48734560-48734579 | MsG0380014051.01.T01:CDS | 35.0% |
| !! | TTTTGACTGAATGAAATGGG+GGG | - | Chr3:48734386-48734405 | MsG0380014051.01.T01:CDS | 35.0% |
| !!! | TTGTTTTTTTGAGAGGAGGA+GGG | - | Chr3:48733615-48733634 | MsG0380014051.01.T01:intron | 35.0% |
| !!! | TTTGTTTTTTTGAGAGGAGG+AGG | - | Chr3:48733614-48733633 | MsG0380014051.01.T01:intron | 35.0% |
| ACTTCTTCCCCATACTACAA+GGG | + | Chr3:48734798-48734817 | None:intergenic | 40.0% | |
| AGCAATAACCGTAAATGGAC+CGG | - | Chr3:48732410-48732429 | MsG0380014051.01.T01:intron | 40.0% | |
| ATCTGCCTTATGTAACACGT+TGG | - | Chr3:48732361-48732380 | MsG0380014051.01.T01:intron | 40.0% | |
| CAACGAAAATGCATGTTCTG+GGG | - | Chr3:48733284-48733303 | MsG0380014051.01.T01:intron | 40.0% | |
| CAATTGTTCCGGTCCATTTA+CGG | + | Chr3:48732421-48732440 | None:intergenic | 40.0% | |
| CGACTTATTGTTACTCTGGA+TGG | - | Chr3:48732252-48732271 | MsG0380014051.01.T01:CDS | 40.0% | |
| GCAAGCTAGTGTAGGAATAA+GGG | - | Chr3:48733808-48733827 | MsG0380014051.01.T01:intron | 40.0% | |
| GCACCAATATCTGCCATAAA+AGG | + | Chr3:48732534-48732553 | None:intergenic | 40.0% | |
| GCATAGCTTCTCATCTACTA+TGG | - | Chr3:48732502-48732521 | MsG0380014051.01.T01:intron | 40.0% | |
| GCATTTCCTTACTACTCTCA+AGG | - | Chr3:48734455-48734474 | MsG0380014051.01.T01:CDS | 40.0% | |
| GGGGGGGTAAAATAAAACAT+AGG | - | Chr3:48734403-48734422 | MsG0380014051.01.T01:CDS | 40.0% | |
| GGGTTATTTACACAGAGGTA+TGG | - | Chr3:48732305-48732324 | MsG0380014051.01.T01:intron | 40.0% | |
| GTAAATGGACCGGAACAATT+GGG | - | Chr3:48732420-48732439 | MsG0380014051.01.T01:intron | 40.0% | |
| TCTGCCTTATGTAACACGTT+GGG | - | Chr3:48732362-48732381 | MsG0380014051.01.T01:intron | 40.0% | |
| TTCCCTTTCCCTTGTAGTAT+GGG | - | Chr3:48734787-48734806 | MsG0380014051.01.T01:CDS | 40.0% | |
| TTTCCCTTTCCCTTGTAGTA+TGG | - | Chr3:48734786-48734805 | MsG0380014051.01.T01:CDS | 40.0% | |
| TTTGACTGAATGAAATGGGG+GGG | - | Chr3:48734387-48734406 | MsG0380014051.01.T01:CDS | 40.0% | |
| ! | ATGAGGTCTTTTCTTGTAGC+TGG | + | Chr3:48732186-48732205 | None:intergenic | 40.0% |
| ! | CTTTTTCCCCAGTTCAAATC+CGG | - | Chr3:48733707-48733726 | MsG0380014051.01.T01:intron | 40.0% |
| ! | GAAGAACACCATGCATTGAT+GGG | + | Chr3:48732233-48732252 | None:intergenic | 40.0% |
| ! | GGACCTTTTATGGCAGATAT+TGG | - | Chr3:48732528-48732547 | MsG0380014051.01.T01:intron | 40.0% |
| ! | TTTTCGTATTGGAGGAGTAG+CGG | - | Chr3:48732644-48732663 | MsG0380014051.01.T01:intron | 40.0% |
| ! | TTTTTCCCCAGTTCAAATCC+GGG | - | Chr3:48733708-48733727 | MsG0380014051.01.T01:intron | 40.0% |
| !! | CGTATATAGCTGGCTCTTTT+AGG | + | Chr3:48732459-48732478 | None:intergenic | 40.0% |
| !! | GTAGTGTCCATCTACTTTTG+GGG | - | Chr3:48733980-48733999 | MsG0380014051.01.T01:intron | 40.0% |
| !!! | TGTTTTTTTGAGAGGAGGAG+GGG | - | Chr3:48733616-48733635 | MsG0380014051.01.T01:intron | 40.0% |
| AGCTTCTCATCTACTATGGC+TGG | - | Chr3:48732506-48732525 | MsG0380014051.01.T01:intron | 45.0% | |
| ATAGTAAGTCTTGCTTGGGC+TGG | - | Chr3:48734743-48734762 | MsG0380014051.01.T01:CDS | 45.0% | |
| ATGTGCTGTCCCGAACAAAT+AGG | + | Chr3:48733146-48733165 | None:intergenic | 45.0% | |
| CACTTCTTCCCCATACTACA+AGG | + | Chr3:48734799-48734818 | None:intergenic | 45.0% | |
| CGAAGAACACCATGCATTGA+TGG | + | Chr3:48732234-48732253 | None:intergenic | 45.0% | |
| CGAATCGGGAGACAATCAAA+TGG | - | Chr3:48734293-48734312 | MsG0380014051.01.T01:CDS | 45.0% | |
| CGCAAGCTAGTGTAGGAATA+AGG | - | Chr3:48733807-48733826 | MsG0380014051.01.T01:intron | 45.0% | |
| CGGATTTGAACTGGGGAAAA+AGG | + | Chr3:48733709-48733728 | None:intergenic | 45.0% | |
| CGTAAATGGACCGGAACAAT+TGG | - | Chr3:48732419-48732438 | MsG0380014051.01.T01:intron | 45.0% | |
| CTTGTAGTATGGGGAAGAAG+TGG | - | Chr3:48734797-48734816 | MsG0380014051.01.T01:CDS | 45.0% | |
| GCTTCTCATCTACTATGGCT+GGG | - | Chr3:48732507-48732526 | MsG0380014051.01.T01:intron | 45.0% | |
| TCCCCATACTACAAGGGAAA+GGG | + | Chr3:48734792-48734811 | None:intergenic | 45.0% | |
| TCCCTTTCCCTTGTAGTATG+GGG | - | Chr3:48734788-48734807 | MsG0380014051.01.T01:CDS | 45.0% | |
| TGGATAAGGATAGGTCGGAT+GGG | - | Chr3:48734016-48734035 | MsG0380014051.01.T01:intron | 45.0% | |
| TTCCCCATACTACAAGGGAA+AGG | + | Chr3:48734793-48734812 | None:intergenic | 45.0% | |
| TTGGATAAGGATAGGTCGGA+TGG | - | Chr3:48734015-48734034 | MsG0380014051.01.T01:intron | 45.0% | |
| ! | ACTATGGCTGGGACCTTTTA+TGG | - | Chr3:48732518-48732537 | MsG0380014051.01.T01:intron | 45.0% |
| ! | GATCTATTTGAAGCTGCGAC+AGG | - | Chr3:48732600-48732619 | MsG0380014051.01.T01:intron | 45.0% |
| ! | GCCCCATATTGACTATCATG+AGG | + | Chr3:48732203-48732222 | None:intergenic | 45.0% |
| !! | TCTTGCTTGGGCTGGTTTAA+TGG | - | Chr3:48734751-48734770 | MsG0380014051.01.T01:CDS | 45.0% |
| !! | AAAATAATAATAATATTGAT+TGG | - | Chr3:48733362-48733381 | MsG0380014051.01.T01:intron | 5.0% |
| CCTCAACACCCATCAATGCA+TGG | - | Chr3:48732222-48732241 | MsG0380014051.01.T01:CDS | 50.0% | |
| CGGCTGATCTACCTTATGGT+TGG | - | Chr3:48732664-48732683 | MsG0380014051.01.T01:intron | 50.0% | |
| GGATAAGGATAGGTCGGATG+GGG | - | Chr3:48734017-48734036 | MsG0380014051.01.T01:intron | 50.0% | |
| GTAGCGGCTGATCTACCTTA+TGG | - | Chr3:48732660-48732679 | MsG0380014051.01.T01:intron | 50.0% | |
| TTTCCAGCGCAAGCTAGTGT+AGG | - | Chr3:48733800-48733819 | MsG0380014051.01.T01:intron | 50.0% | |
| ! | ATTCCTACACTAGCTTGCGC+TGG | + | Chr3:48733806-48733825 | None:intergenic | 50.0% |
| ! | CCATGCATTGATGGGTGTTG+AGG | + | Chr3:48732225-48732244 | None:intergenic | 50.0% |
| !! | ATTTTGGCGATATGGCCGAG+TGG | - | Chr3:48733663-48733682 | MsG0380014051.01.T01:intron | 50.0% |
| !! | TTGAGAGGAGGAGGGGTATT+CGG | - | Chr3:48733623-48733642 | MsG0380014051.01.T01:intron | 50.0% |
| ATATGGCCGAGTGGTAAGGC+GGG | - | Chr3:48733672-48733691 | MsG0380014051.01.T01:intron | 55.0% | |
| CGACACCCGGATTTGAACTG+GGG | + | Chr3:48733716-48733735 | None:intergenic | 55.0% | |
| CTTATCGATCAGGCGACACC+CGG | + | Chr3:48733729-48733748 | None:intergenic | 55.0% | |
| GATATGGCCGAGTGGTAAGG+CGG | - | Chr3:48733671-48733690 | MsG0380014051.01.T01:intron | 55.0% | |
| GCGACACCCGGATTTGAACT+GGG | + | Chr3:48733717-48733736 | None:intergenic | 55.0% | |
| GGCGACACCCGGATTTGAAC+TGG | + | Chr3:48733718-48733737 | None:intergenic | 60.0% | |
| GGCGATATGGCCGAGTGGTA+AGG | - | Chr3:48733668-48733687 | MsG0380014051.01.T01:intron | 60.0% | |
| TATGGCCGAGTGGTAAGGCG+GGG | - | Chr3:48733673-48733692 | MsG0380014051.01.T01:intron | 60.0% | |
| ATGGCCGAGTGGTAAGGCGG+GGG | - | Chr3:48733674-48733693 | MsG0380014051.01.T01:intron | 65.0% | |
| CAGTCCCCCGCCTTACCACT+CGG | + | Chr3:48733681-48733700 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 48732174 | 48734826 | 48732174 | ID=MsG0380014051.01;Name=MsG0380014051.01 |
| Chr3 | mRNA | 48732174 | 48734826 | 48732174 | ID=MsG0380014051.01.T01;Parent=MsG0380014051.01;Name=MsG0380014051.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0|0|1|0|0|2|0|249 |
| Chr3 | exon | 48734187 | 48734826 | 48734187 | ID=MsG0380014051.01.T01:exon:9339;Parent=MsG0380014051.01.T01 |
| Chr3 | exon | 48732174 | 48732283 | 48732174 | ID=MsG0380014051.01.T01:exon:9338;Parent=MsG0380014051.01.T01 |
| Chr3 | CDS | 48734187 | 48734826 | 48734187 | ID=MsG0380014051.01.T01:cds;Parent=MsG0380014051.01.T01 |
| Chr3 | CDS | 48732174 | 48732283 | 48732174 | ID=MsG0380014051.01.T01:cds;Parent=MsG0380014051.01.T01 |
| Gene Sequence |
| Protein sequence |
