Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014040.01.T01 | QRZ59404.1 | 100 | 119 | 0 | 0 | 1 | 119 | 18 | 136 | 2.01E-79 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014040.01.T01 | B5LMR0 | 92.437 | 119 | 9 | 0 | 1 | 119 | 17 | 135 | 7.02E-77 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014040.01.T01 | A0A0F6NLP2 | 100.000 | 119 | 0 | 0 | 1 | 119 | 17 | 135 | 1.03e-79 | 239 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048690.01 | MsG0380014040.01 | 0.809306 | 2.019483e-50 | 1.181536e-47 |
| MsG0080048692.01 | MsG0380014040.01 | 0.882150 | 1.326287e-70 | 7.988288e-67 |
| MsG0080048693.01 | MsG0380014040.01 | 0.820708 | 5.945724e-53 | 4.739787e-50 |
| MsG0080048698.01 | MsG0380014040.01 | 0.905864 | 2.732693e-80 | 4.510659e-76 |
| MsG0080048699.01 | MsG0380014040.01 | 0.919404 | 4.696118e-87 | 1.506773e-82 |
| MsG0080049076.01 | MsG0380014040.01 | 0.816147 | 6.424388e-52 | 4.516156e-49 |
| MsG0180002226.01 | MsG0380014040.01 | 0.832314 | 1.014319e-55 | 1.129425e-52 |
| MsG0180002435.01 | MsG0380014040.01 | 0.820093 | 8.229762e-53 | 6.450571e-50 |
| MsG0180003624.01 | MsG0380014040.01 | 0.801402 | 9.160208e-49 | 4.370495e-46 |
| MsG0180004435.01 | MsG0380014040.01 | 0.819537 | 1.102510e-52 | 8.507970e-50 |
| MsG0380013448.01 | MsG0380014040.01 | 0.838432 | 2.886475e-57 | 3.865507e-54 |
| MsG0380013888.01 | MsG0380014040.01 | 0.870336 | 1.575696e-66 | 6.106915e-63 |
| MsG0380013916.01 | MsG0380014040.01 | 0.878189 | 3.433774e-69 | 1.775891e-65 |
| MsG0380013917.01 | MsG0380014040.01 | 0.895450 | 9.474840e-76 | 9.838336e-72 |
| MsG0380013918.01 | MsG0380014040.01 | 0.843420 | 1.416636e-58 | 2.215329e-55 |
| MsG0380013920.01 | MsG0380014040.01 | 0.889922 | 1.569106e-73 | 1.291477e-69 |
| MsG0380013923.01 | MsG0380014040.01 | 0.948182 | 1.565280e-106 | 2.873860e-101 |
| MsG0380013926.01 | MsG0380014040.01 | 0.890927 | 6.324575e-74 | 5.428607e-70 |
| MsG0380013929.01 | MsG0380014040.01 | 0.873927 | 1.005755e-67 | 4.441887e-64 |
| MsG0380013931.01 | MsG0380014040.01 | 0.911170 | 8.229566e-83 | 1.741536e-78 |
| MsG0380013932.01 | MsG0380014040.01 | 0.864226 | 1.416181e-64 | 4.413815e-61 |
| MsG0380013940.01 | MsG0380014040.01 | 0.842117 | 3.145235e-58 | 4.721117e-55 |
| MsG0380013941.01 | MsG0380014040.01 | 0.904947 | 7.199784e-80 | 1.139129e-75 |
| MsG0380013942.01 | MsG0380014040.01 | 0.925056 | 3.075496e-90 | 1.343275e-85 |
| MsG0380013943.01 | MsG0380014040.01 | 0.837230 | 5.877429e-57 | 7.585356e-54 |
| MsG0380013944.01 | MsG0380014040.01 | 0.987998 | 2.509759e-172 | 1.410085e-165 |
| MsG0380013945.01 | MsG0380014040.01 | 0.841862 | 3.672619e-58 | 5.468391e-55 |
| MsG0380013948.01 | MsG0380014040.01 | 0.872932 | 2.173982e-67 | 9.261150e-64 |
| MsG0380013949.01 | MsG0380014040.01 | 0.802457 | 5.559629e-49 | 2.724723e-46 |
| MsG0380013950.01 | MsG0380014040.01 | 0.821807 | 3.317866e-53 | 2.727591e-50 |
| MsG0380013951.01 | MsG0380014040.01 | 0.930575 | 1.340782e-93 | 8.028717e-89 |
| MsG0380013952.01 | MsG0380014040.01 | 0.908732 | 1.238934e-81 | 2.331585e-77 |
| MsG0380013953.01 | MsG0380014040.01 | 0.831608 | 1.515544e-55 | 1.653053e-52 |
| MsG0380013957.01 | MsG0380014040.01 | 0.839994 | 1.135413e-57 | 1.595403e-54 |
| MsG0380013959.01 | MsG0380014040.01 | 0.862110 | 6.391185e-64 | 1.850241e-60 |
| MsG0380013961.01 | MsG0380014040.01 | 0.834502 | 2.887966e-56 | 3.433966e-53 |
| MsG0380013962.01 | MsG0380014040.01 | 0.836692 | 8.063295e-57 | 1.023932e-53 |
| MsG0380013964.01 | MsG0380014040.01 | 0.808664 | 2.771018e-50 | 1.593720e-47 |
| MsG0380013966.01 | MsG0380014040.01 | 0.913909 | 3.559449e-84 | 8.613880e-80 |
| MsG0380013967.01 | MsG0380014040.01 | 0.840656 | 7.623408e-58 | 1.093249e-54 |
| MsG0380013968.01 | MsG0380014040.01 | 0.928174 | 4.190142e-92 | 2.175979e-87 |
| MsG0380013969.01 | MsG0380014040.01 | 0.908966 | 9.583629e-82 | 1.823968e-77 |
| MsG0380013971.01 | MsG0380014040.01 | 0.822650 | 2.114161e-53 | 1.780351e-50 |
| MsG0380013972.01 | MsG0380014040.01 | 0.912919 | 1.121463e-83 | 2.584062e-79 |
| MsG0380013977.01 | MsG0380014040.01 | 0.842661 | 2.256812e-58 | 3.445398e-55 |
| MsG0380013981.01 | MsG0380014040.01 | 0.906789 | 1.018900e-80 | 1.752945e-76 |
| MsG0380013983.01 | MsG0380014040.01 | 0.830686 | 2.553981e-55 | 2.710544e-52 |
| MsG0380013995.01 | MsG0380014040.01 | 0.925951 | 9.139762e-91 | 4.196867e-86 |
| MsG0380014004.01 | MsG0380014040.01 | 0.822323 | 2.518812e-53 | 2.101395e-50 |
| MsG0380014005.01 | MsG0380014040.01 | 0.844817 | 5.976084e-59 | 9.764101e-56 |
| MsG0380014006.01 | MsG0380014040.01 | 0.830666 | 2.582253e-55 | 2.738951e-52 |
| MsG0380014008.01 | MsG0380014040.01 | 0.985578 | 5.267223e-164 | 2.170184e-157 |
| MsG0380014009.01 | MsG0380014040.01 | 0.826901 | 2.103144e-54 | 1.998870e-51 |
| MsG0380014011.01 | MsG0380014040.01 | 0.856633 | 2.819421e-62 | 6.772096e-59 |
| MsG0380014018.01 | MsG0380014040.01 | 0.910356 | 2.052375e-82 | 4.175677e-78 |
| MsG0380014023.01 | MsG0380014040.01 | 0.874370 | 7.122472e-68 | 3.198016e-64 |
| MsG0380014026.01 | MsG0380014040.01 | 0.891629 | 3.335197e-74 | 2.947838e-70 |
| MsG0380014027.01 | MsG0380014040.01 | 0.809464 | 1.868284e-50 | 1.097662e-47 |
| MsG0380014032.01 | MsG0380014040.01 | 0.843348 | 1.481116e-58 | 2.310976e-55 |
| MsG0380014033.01 | MsG0380014040.01 | 0.880380 | 5.756609e-70 | 3.236411e-66 |
| MsG0380014034.01 | MsG0380014040.01 | 0.826928 | 2.072540e-54 | 1.971348e-51 |
| MsG0380014036.01 | MsG0380014040.01 | 0.876627 | 1.201134e-68 | 5.864351e-65 |
| MsG0380014039.01 | MsG0380014040.01 | 0.964907 | 6.370825e-124 | 3.891340e-118 |
| MsG0380014040.01 | MsG0380014041.01 | 0.835596 | 1.530458e-56 | 1.880338e-53 |
| MsG0380014040.01 | MsG0380014044.01 | 0.888404 | 6.086838e-73 | 4.709176e-69 |
| MsG0380014040.01 | MsG0380014051.01 | 0.911626 | 4.913852e-83 | 1.062253e-78 |
| MsG0380014040.01 | MsG0380014054.01 | 0.819760 | 9.807092e-53 | 7.615166e-50 |
| MsG0380014040.01 | MsG0380014055.01 | 0.826100 | 3.265657e-54 | 3.033224e-51 |
| MsG0380014040.01 | MsG0380014057.01 | 0.931917 | 1.855018e-94 | 1.208174e-89 |
| MsG0380014040.01 | MsG0380015697.01 | 0.802061 | 6.706084e-49 | 3.253619e-46 |
| MsG0380014040.01 | MsG0380017007.01 | 0.939068 | 2.363469e-99 | 2.374743e-94 |
| MsG0380014040.01 | MsG0480018296.01 | 0.886882 | 2.322729e-72 | 1.688901e-68 |
| MsG0380014040.01 | MsG0480023810.01 | -0.812370 | 4.388111e-51 | 2.784922e-48 |
| MsG0380014040.01 | MsG0580027677.01 | 0.834972 | 2.199423e-56 | 2.652412e-53 |
| MsG0380014040.01 | MsG0780038197.01 | 0.812264 | 4.626118e-51 | 2.927747e-48 |
| MsG0380014040.01 | MsG0780040316.01 | 0.855532 | 5.924025e-62 | 1.371940e-58 |
| MsG0380014040.01 | MsG0880045630.01 | 0.810096 | 1.365913e-50 | 8.160068e-48 |
| MsG0280007042.01 | MsG0380014040.01 | 0.803652 | 3.148058e-49 | 1.590637e-46 |
| MsG0280009733.01 | MsG0380014040.01 | 0.802371 | 5.791697e-49 | 2.832365e-46 |
| MsG0280009971.01 | MsG0380014040.01 | -0.828802 | 7.342097e-55 | 7.375038e-52 |
| MsG0280010140.01 | MsG0380014040.01 | 0.831528 | 1.586523e-55 | 1.726324e-52 |
| MsG0280010145.01 | MsG0380014040.01 | 0.923895 | 1.451858e-89 | 5.962382e-85 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014040.01.T01 | MTR_4g034750 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.83e-83 | 239 |
| MsG0380014040.01.T01 | MTR_1779s0010 | 89.831 | 118 | 12 | 0 | 1 | 118 | 1 | 118 | 5.28e-75 | 218 |
| MsG0380014040.01.T01 | MTR_0002s0140 | 93.137 | 102 | 7 | 0 | 18 | 119 | 152 | 253 | 1.63e-63 | 194 |
| MsG0380014040.01.T01 | MTR_0002s0780 | 84.112 | 107 | 17 | 0 | 1 | 107 | 32 | 138 | 1.06e-62 | 191 |
| MsG0380014040.01.T01 | MTR_0702s0030 | 92.473 | 93 | 7 | 0 | 1 | 93 | 1 | 93 | 3.41e-58 | 175 |
| MsG0380014040.01.T01 | MTR_8g081460 | 92.473 | 93 | 7 | 0 | 1 | 93 | 1 | 93 | 3.41e-58 | 175 |
| MsG0380014040.01.T01 | MTR_2g087560 | 100.000 | 62 | 0 | 0 | 58 | 119 | 5 | 66 | 8.33e-39 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014040.01.T01 | ATCG00790 | 89.916 | 119 | 12 | 0 | 1 | 119 | 17 | 135 | 2.48e-75 | 219 |
| MsG0380014040.01.T01 | AT2G28815 | 69.492 | 118 | 34 | 1 | 2 | 119 | 176 | 291 | 7.25e-52 | 165 |
| MsG0380014040.01.T01 | ATMG00080 | 44.444 | 117 | 57 | 1 | 8 | 116 | 60 | 176 | 3.98e-27 | 99.0 |
Find 40 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGTTCGTATAGGCATTT+TGG | 0.204790 | 3:+48717780 | None:intergenic |
| TTCGCCGAGGTGGGAAAATA+TGG | 0.213680 | 3:-48717975 | MsG0380014040.01.T01:CDS |
| GAAAAGGATCTCCCGAATAT+TGG | 0.285746 | 3:-48717891 | MsG0380014040.01.T01:CDS |
| CTTCGGAAAATATGCTCTTC+AGG | 0.308187 | 3:-48718064 | MsG0380014040.01.T01:CDS |
| AACGACAGCTACCCAATATT+CGG | 0.319047 | 3:+48717879 | None:intergenic |
| CGGCAAAATACTTTATGAAA+TGG | 0.331198 | 3:-48717851 | MsG0380014040.01.T01:CDS |
| TACCGAAACGCGTATGGGTT+CGG | 0.335014 | 3:-48717914 | MsG0380014040.01.T01:CDS |
| TCCCGAACCCATACGCGTTT+CGG | 0.342652 | 3:+48717912 | None:intergenic |
| TCGGTAGGTCTTACTGTAAC+AGG | 0.351913 | 3:+48717931 | None:intergenic |
| ACCGAAACGCGTATGGGTTC+GGG | 0.378215 | 3:-48717913 | MsG0380014040.01.T01:CDS |
| ACGCGTATGGGTTCGGGAAA+AGG | 0.380444 | 3:-48717907 | MsG0380014040.01.T01:CDS |
| AAAAGGATCTCCCGAATATT+GGG | 0.401363 | 3:-48717890 | MsG0380014040.01.T01:CDS |
| TTCAGGCACTTGAGCCCGCT+TGG | 0.408794 | 3:-48718047 | MsG0380014040.01.T01:CDS |
| CTTACTGTAACAGGTTTGTC+TGG | 0.423476 | 3:+48717940 | None:intergenic |
| ACGACAGCTACCCAATATTC+GGG | 0.439549 | 3:+48717880 | None:intergenic |
| CCCAGAAAATATAGCTAGAA+AGG | 0.450098 | 3:-48717821 | MsG0380014040.01.T01:CDS |
| GGCAAAATACTTTATGAAAT+GGG | 0.452998 | 3:-48717850 | MsG0380014040.01.T01:CDS |
| CGAGGTAATACAATTTCCTT+CGG | 0.460344 | 3:-48718081 | MsG0380014040.01.T01:CDS |
| AAGACCTACCGAAACGCGTA+TGG | 0.469364 | 3:-48717920 | MsG0380014040.01.T01:CDS |
| TCACGAAATGTTCGCCGAGG+TGG | 0.471440 | 3:-48717985 | MsG0380014040.01.T01:CDS |
| GGAAATTGTATTACCTCGAT+AGG | 0.489800 | 3:+48718086 | None:intergenic |
| GACAAATAGAAGCAGGGCGA+CGG | 0.495582 | 3:-48718014 | MsG0380014040.01.T01:CDS |
| CACGAAATGTTCGCCGAGGT+GGG | 0.504047 | 3:-48717984 | MsG0380014040.01.T01:CDS |
| AGAATGAATTGAGTTCGTAT+AGG | 0.508317 | 3:+48717772 | None:intergenic |
| ACATCTAGACAAATAGAAGC+AGG | 0.517724 | 3:-48718021 | MsG0380014040.01.T01:CDS |
| ACAAATAGAAGCAGGGCGAC+GGG | 0.523315 | 3:-48718013 | MsG0380014040.01.T01:CDS |
| CAACATCGAGGAAGAATGAA+AGG | 0.544496 | 3:-48718114 | None:intergenic |
| TCGCCGAGGTGGGAAAATAT+GGG | 0.558660 | 3:-48717974 | MsG0380014040.01.T01:CDS |
| AAATACTTTATGAAATGGGA+GGG | 0.559811 | 3:-48717846 | MsG0380014040.01.T01:CDS |
| TGTCTAGATGTGATCCAAGC+GGG | 0.577171 | 3:+48718033 | None:intergenic |
| AGACCTACCGAAACGCGTAT+GGG | 0.590467 | 3:-48717919 | MsG0380014040.01.T01:CDS |
| TGGGTAGCTGTCGTTAAACC+CGG | 0.594583 | 3:-48717871 | MsG0380014040.01.T01:CDS |
| AATACTTTATGAAATGGGAG+GGG | 0.600055 | 3:-48717845 | MsG0380014040.01.T01:CDS |
| AAAATACTTTATGAAATGGG+AGG | 0.611197 | 3:-48717847 | MsG0380014040.01.T01:CDS |
| GAACCCATACGCGTTTCGGT+AGG | 0.634160 | 3:+48717916 | None:intergenic |
| TAGAAAGGCTATTTCAATAG+CGG | 0.635841 | 3:-48717806 | MsG0380014040.01.T01:CDS |
| CATCTAGACAAATAGAAGCA+GGG | 0.656135 | 3:-48718020 | MsG0380014040.01.T01:CDS |
| ATGAAAGGAAAAGCCTATCG+AGG | 0.661155 | 3:-48718099 | MsG0380014040.01.T01:CDS |
| TTGTCTAGATGTGATCCAAG+CGG | 0.679866 | 3:+48718032 | None:intergenic |
| ATGTCACGAAATGTTCGCCG+AGG | 0.702470 | 3:-48717988 | MsG0380014040.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAATACTTTATGAAATGGG+AGG | - | Chr3:48718014-48718033 | MsG0380014040.01.T01:CDS | 25.0% |
| ! | AAATACTTTATGAAATGGGA+GGG | - | Chr3:48718015-48718034 | MsG0380014040.01.T01:CDS | 25.0% |
| ! | GGCAAAATACTTTATGAAAT+GGG | - | Chr3:48718011-48718030 | MsG0380014040.01.T01:CDS | 25.0% |
| !!! | ATTTCATAAAGTATTTTGCC+GGG | + | Chr3:48718011-48718030 | None:intergenic | 25.0% |
| !!! | CATTTCATAAAGTATTTTGC+CGG | + | Chr3:48718012-48718031 | None:intergenic | 25.0% |
| AATACTTTATGAAATGGGAG+GGG | - | Chr3:48718016-48718035 | MsG0380014040.01.T01:CDS | 30.0% | |
| AGAATGAATTGAGTTCGTAT+AGG | + | Chr3:48718092-48718111 | None:intergenic | 30.0% | |
| CGGCAAAATACTTTATGAAA+TGG | - | Chr3:48718010-48718029 | MsG0380014040.01.T01:CDS | 30.0% | |
| ! | TAGAAAGGCTATTTCAATAG+CGG | - | Chr3:48718055-48718074 | MsG0380014040.01.T01:CDS | 30.0% |
| !!! | CCTTTCTAGCTATATTTTCT+GGG | + | Chr3:48718043-48718062 | None:intergenic | 30.0% |
| AAAAGGATCTCCCGAATATT+GGG | - | Chr3:48717971-48717990 | MsG0380014040.01.T01:CDS | 35.0% | |
| ACATCTAGACAAATAGAAGC+AGG | - | Chr3:48717840-48717859 | MsG0380014040.01.T01:CDS | 35.0% | |
| CATCTAGACAAATAGAAGCA+GGG | - | Chr3:48717841-48717860 | MsG0380014040.01.T01:CDS | 35.0% | |
| CCCAGAAAATATAGCTAGAA+AGG | - | Chr3:48718040-48718059 | MsG0380014040.01.T01:CDS | 35.0% | |
| CGAGGTAATACAATTTCCTT+CGG | - | Chr3:48717780-48717799 | MsG0380014040.01.T01:CDS | 35.0% | |
| GGAAATTGTATTACCTCGAT+AGG | + | Chr3:48717778-48717797 | None:intergenic | 35.0% | |
| ! | TTGAGTTCGTATAGGCATTT+TGG | + | Chr3:48718084-48718103 | None:intergenic | 35.0% |
| !!! | GCCTTTCTAGCTATATTTTC+TGG | + | Chr3:48718044-48718063 | None:intergenic | 35.0% |
| AACGACAGCTACCCAATATT+CGG | + | Chr3:48717985-48718004 | None:intergenic | 40.0% | |
| ATGAAAGGAAAAGCCTATCG+AGG | - | Chr3:48717762-48717781 | MsG0380014040.01.T01:CDS | 40.0% | |
| CTTACTGTAACAGGTTTGTC+TGG | + | Chr3:48717924-48717943 | None:intergenic | 40.0% | |
| CTTCGGAAAATATGCTCTTC+AGG | - | Chr3:48717797-48717816 | MsG0380014040.01.T01:CDS | 40.0% | |
| GAAAAGGATCTCCCGAATAT+TGG | - | Chr3:48717970-48717989 | MsG0380014040.01.T01:CDS | 40.0% | |
| TTGTCTAGATGTGATCCAAG+CGG | + | Chr3:48717832-48717851 | None:intergenic | 40.0% | |
| !! | CTGAAGAGCATATTTTCCGA+AGG | + | Chr3:48717799-48717818 | None:intergenic | 40.0% |
| ACGACAGCTACCCAATATTC+GGG | + | Chr3:48717984-48718003 | None:intergenic | 45.0% | |
| TCGGTAGGTCTTACTGTAAC+AGG | + | Chr3:48717933-48717952 | None:intergenic | 45.0% | |
| TGTCTAGATGTGATCCAAGC+GGG | + | Chr3:48717831-48717850 | None:intergenic | 45.0% | |
| ! | GTACCCATATTTTCCCACCT+CGG | + | Chr3:48717893-48717912 | None:intergenic | 45.0% |
| AAGACCTACCGAAACGCGTA+TGG | - | Chr3:48717941-48717960 | MsG0380014040.01.T01:CDS | 50.0% | |
| ACAAATAGAAGCAGGGCGAC+GGG | - | Chr3:48717848-48717867 | MsG0380014040.01.T01:CDS | 50.0% | |
| AGACCTACCGAAACGCGTAT+GGG | - | Chr3:48717942-48717961 | MsG0380014040.01.T01:CDS | 50.0% | |
| ATGTCACGAAATGTTCGCCG+AGG | - | Chr3:48717873-48717892 | MsG0380014040.01.T01:CDS | 50.0% | |
| GACAAATAGAAGCAGGGCGA+CGG | - | Chr3:48717847-48717866 | MsG0380014040.01.T01:CDS | 50.0% | |
| TACCGAAACGCGTATGGGTT+CGG | - | Chr3:48717947-48717966 | MsG0380014040.01.T01:CDS | 50.0% | |
| TCGCCGAGGTGGGAAAATAT+GGG | - | Chr3:48717887-48717906 | MsG0380014040.01.T01:CDS | 50.0% | |
| TGGGTAGCTGTCGTTAAACC+CGG | - | Chr3:48717990-48718009 | MsG0380014040.01.T01:CDS | 50.0% | |
| TTCGCCGAGGTGGGAAAATA+TGG | - | Chr3:48717886-48717905 | MsG0380014040.01.T01:CDS | 50.0% | |
| ACCGAAACGCGTATGGGTTC+GGG | - | Chr3:48717948-48717967 | MsG0380014040.01.T01:CDS | 55.0% | |
| ACGCGTATGGGTTCGGGAAA+AGG | - | Chr3:48717954-48717973 | MsG0380014040.01.T01:CDS | 55.0% | |
| CACGAAATGTTCGCCGAGGT+GGG | - | Chr3:48717877-48717896 | MsG0380014040.01.T01:CDS | 55.0% | |
| GAACCCATACGCGTTTCGGT+AGG | + | Chr3:48717948-48717967 | None:intergenic | 55.0% | |
| TCACGAAATGTTCGCCGAGG+TGG | - | Chr3:48717876-48717895 | MsG0380014040.01.T01:CDS | 55.0% | |
| TCCCGAACCCATACGCGTTT+CGG | + | Chr3:48717952-48717971 | None:intergenic | 55.0% | |
| TTCAGGCACTTGAGCCCGCT+TGG | - | Chr3:48717814-48717833 | MsG0380014040.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 48717762 | 48718121 | 48717762 | ID=MsG0380014040.01;Name=MsG0380014040.01 |
| Chr3 | mRNA | 48717762 | 48718121 | 48717762 | ID=MsG0380014040.01.T01;Parent=MsG0380014040.01;Name=MsG0380014040.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|119 |
| Chr3 | exon | 48717762 | 48718121 | 48717762 | ID=MsG0380014040.01.T01:exon:7354;Parent=MsG0380014040.01.T01 |
| Chr3 | CDS | 48717762 | 48718121 | 48717762 | ID=MsG0380014040.01.T01:cds;Parent=MsG0380014040.01.T01 |
| Gene Sequence |
| Protein sequence |
