AlfalfaGEDB | MsG0380013952.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013952.01

KEGG: K05572
GO: GO:0016020 GO:0055114
PFAM: PF00146

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013952.01.T01	AOG66162.1	100	188	0	0	1	188	1	188	2.24E-126	363

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013952.01.T01	Q9BBN9	93.855	179	11	0	1	179	1	179	1.52E-114	333

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013952.01.T01	A0A1B3SZZ0	100.000	188	0	0	1	188	1	188	1.07e-126	363

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048313.01	MsG0380013952.01	0.813356	2.668462e-51	1.738765e-48
MsG0080048560.01	MsG0380013952.01	0.825489	4.557738e-54	4.160279e-51
MsG0080048689.01	MsG0380013952.01	0.842280	2.847588e-58	4.296098e-55
MsG0080048690.01	MsG0380013952.01	0.854232	1.411684e-61	3.131982e-58
MsG0080048691.01	MsG0380013952.01	0.857139	2.000507e-62	4.888463e-59
MsG0080048692.01	MsG0380013952.01	0.877376	6.602975e-69	3.312903e-65
MsG0080048693.01	MsG0380013952.01	0.817284	3.570764e-52	2.589431e-49
MsG0080048694.01	MsG0380013952.01	0.802071	6.676358e-49	3.239985e-46
MsG0080048695.01	MsG0380013952.01	0.801876	7.322465e-49	3.536073e-46
MsG0080048697.01	MsG0380013952.01	0.839961	1.158503e-57	1.626033e-54
MsG0080048698.01	MsG0380013952.01	0.926099	7.461239e-91	3.454342e-86
MsG0080048699.01	MsG0380013952.01	0.911771	4.167443e-83	9.075348e-79
MsG0080048813.01	MsG0380013952.01	0.801478	8.834157e-49	4.223230e-46
MsG0080049076.01	MsG0380013952.01	0.846780	1.751631e-59	3.048559e-56
MsG0180001925.01	MsG0380013952.01	0.802577	5.252912e-49	2.582176e-46
MsG0180002226.01	MsG0380013952.01	0.842231	2.933843e-58	4.419246e-55
MsG0180004301.01	MsG0380013952.01	0.829158	6.020049e-55	6.111013e-52
MsG0180004434.01	MsG0380013952.01	0.809219	2.108321e-50	1.230695e-47
MsG0180004435.01	MsG0380013952.01	0.829771	4.270794e-55	4.414386e-52
MsG0180004505.01	MsG0380013952.01	0.802724	4.897200e-49	2.416574e-46
MsG0180005791.01	MsG0380013952.01	0.813232	2.840301e-51	1.844340e-48
MsG0280010625.01	MsG0380013952.01	0.806284	8.862316e-50	4.791473e-47
MsG0280010695.01	MsG0380013952.01	0.804821	1.797115e-49	9.358666e-47
MsG0380013448.01	MsG0380013952.01	0.876218	1.663499e-68	7.998900e-65
MsG0380013887.01	MsG0380013952.01	0.816955	4.234786e-52	3.043765e-49
MsG0380013888.01	MsG0380013952.01	0.882312	1.157868e-70	7.019420e-67
MsG0380013889.01	MsG0380013952.01	0.838395	2.949637e-57	3.945483e-54
MsG0380013914.01	MsG0380013952.01	0.811776	5.911717e-51	3.692179e-48
MsG0380013915.01	MsG0380013952.01	0.839986	1.141321e-57	1.603261e-54
MsG0380013916.01	MsG0380013952.01	0.894290	2.833461e-75	2.799275e-71
MsG0380013917.01	MsG0380013952.01	0.988941	4.923463e-176	2.962040e-169
MsG0380013918.01	MsG0380013952.01	0.887670	1.163660e-72	8.735706e-69
MsG0380013919.01	MsG0380013952.01	0.828362	9.376608e-55	9.299152e-52
MsG0380013920.01	MsG0380013952.01	0.878176	3.470373e-69	1.794042e-65
MsG0380013921.01	MsG0380013952.01	0.809525	1.812495e-50	1.066630e-47
MsG0380013923.01	MsG0380013952.01	0.889921	1.569992e-73	1.292175e-69
MsG0380013926.01	MsG0380013952.01	0.895261	1.133705e-75	1.167799e-71
MsG0380013928.01	MsG0380013952.01	0.803806	2.923376e-49	1.483016e-46
MsG0380013929.01	MsG0380013952.01	0.894112	3.349638e-75	3.285541e-71
MsG0380013931.01	MsG0380013952.01	0.943193	1.868618e-102	2.473400e-97
MsG0380013932.01	MsG0380013952.01	0.882725	8.190010e-71	5.044617e-67
MsG0380013935.01	MsG0380013952.01	0.848898	4.570065e-60	8.513389e-57
MsG0380013938.01	MsG0380013952.01	0.805106	1.566984e-49	8.219697e-47
MsG0380013940.01	MsG0380013952.01	0.866352	3.036121e-65	1.020216e-61
MsG0380013941.01	MsG0380013952.01	0.883799	3.305032e-71	2.126231e-67
MsG0380013942.01	MsG0380013952.01	0.932439	8.500062e-95	5.695984e-90
MsG0380013943.01	MsG0380013952.01	0.877332	6.843197e-69	3.427990e-65
MsG0380013944.01	MsG0380013952.01	0.909886	3.467118e-82	6.894355e-78
MsG0380013945.01	MsG0380013952.01	0.869471	3.021151e-66	1.135313e-62
MsG0380013947.01	MsG0380013952.01	0.849001	4.278715e-60	7.998010e-57
MsG0380013948.01	MsG0380013952.01	0.886118	4.514579e-72	3.183089e-68
MsG0380013949.01	MsG0380013952.01	0.830305	3.165523e-55	3.322196e-52
MsG0380013951.01	MsG0380013952.01	0.917782	3.489849e-86	1.026166e-81
MsG0380013952.01	MsG0380013953.01	0.853520	2.262908e-61	4.903179e-58
MsG0380013952.01	MsG0380013954.01	0.812870	3.409701e-51	2.192621e-48
MsG0380013952.01	MsG0380013956.01	0.850032	2.207266e-60	4.266786e-57
MsG0380013952.01	MsG0380013957.01	0.862137	6.270880e-64	1.817116e-60
MsG0380013952.01	MsG0380013959.01	0.857114	2.035240e-62	4.968568e-59
MsG0380013952.01	MsG0380013961.01	0.842650	2.271266e-58	3.466274e-55
MsG0380013952.01	MsG0380013962.01	0.858042	1.080682e-62	2.721651e-59
MsG0380013952.01	MsG0380013964.01	0.845924	2.996865e-59	5.073628e-56
MsG0380013952.01	MsG0380013966.01	0.916396	1.874206e-85	5.143454e-81
MsG0380013952.01	MsG0380013967.01	0.864772	9.556590e-65	3.036315e-61
MsG0380013952.01	MsG0380013968.01	0.910162	2.549578e-82	5.139583e-78
MsG0380013952.01	MsG0380013969.01	0.995394	7.756109e-216	1.076085e-208
MsG0380013952.01	MsG0380013971.01	0.869278	3.490091e-66	1.302142e-62
MsG0380013952.01	MsG0380013972.01	0.934707	2.659527e-96	2.047819e-91
MsG0380013952.01	MsG0380013975.01	0.856134	3.949123e-62	9.330637e-59
MsG0380013952.01	MsG0380013976.01	0.815749	7.880638e-52	5.480282e-49
MsG0380013952.01	MsG0380013977.01	0.872053	4.271623e-67	1.761849e-63
MsG0380013952.01	MsG0380013978.01	0.838472	2.818449e-57	3.779045e-54
MsG0380013952.01	MsG0380013979.01	0.821199	4.584273e-53	3.705095e-50
MsG0380013952.01	MsG0380013980.01	0.828104	1.082176e-54	1.065255e-51
MsG0380013952.01	MsG0380013981.01	0.911932	3.470429e-83	7.613570e-79
MsG0380013952.01	MsG0380013983.01	0.885741	6.259252e-72	4.347642e-68
MsG0380013952.01	MsG0380013995.01	0.894625	2.068656e-75	2.072856e-71
MsG0380013952.01	MsG0380013999.01	0.848711	5.148191e-60	9.532506e-57
MsG0380013952.01	MsG0380014004.01	0.846910	1.613724e-59	2.819958e-56
MsG0380013952.01	MsG0380014005.01	0.868696	5.387248e-66	1.967329e-62
MsG0380013952.01	MsG0380014006.01	0.846114	2.661249e-59	4.532540e-56
MsG0380013952.01	MsG0380014008.01	0.897570	1.237280e-76	1.406301e-72
MsG0380013952.01	MsG0380014009.01	0.819674	1.025783e-52	7.945823e-50
MsG0380013952.01	MsG0380014011.01	0.830527	2.793012e-55	2.950172e-52
MsG0380013952.01	MsG0380014017.01	0.852179	5.469540e-61	1.133541e-57
MsG0380013952.01	MsG0380014018.01	0.901318	3.025933e-78	4.066083e-74
MsG0380013952.01	MsG0380014020.01	0.827711	1.345141e-54	1.308940e-51
MsG0380013952.01	MsG0380014021.01	0.825511	4.505323e-54	4.114855e-51
MsG0380013952.01	MsG0380014023.01	0.911202	7.936667e-83	1.681909e-78
MsG0380013952.01	MsG0380014024.01	0.816013	6.880763e-52	4.819423e-49
MsG0380013952.01	MsG0380014026.01	0.888126	7.781261e-73	5.949741e-69
MsG0380013952.01	MsG0380014027.01	0.833045	6.683078e-56	7.607062e-53
MsG0380013952.01	MsG0380014028.01	0.817354	3.443969e-52	2.502257e-49
MsG0380013952.01	MsG0380014030.01	0.814629	1.398030e-51	9.429214e-49
MsG0380013952.01	MsG0380014032.01	0.873218	1.743762e-67	7.508263e-64
MsG0380013952.01	MsG0380014033.01	0.883115	5.894102e-71	3.688371e-67
MsG0380013952.01	MsG0380014034.01	0.905601	3.612041e-80	5.884271e-76
MsG0380013952.01	MsG0380014035.01	0.854187	1.454906e-61	3.223024e-58
MsG0380013952.01	MsG0380014036.01	0.879424	1.260184e-69	6.829296e-66
MsG0380013952.01	MsG0380014039.01	0.904047	1.844312e-79	2.802258e-75
MsG0380013952.01	MsG0380014040.01	0.908732	1.238934e-81	2.331585e-77
MsG0380013952.01	MsG0380014041.01	0.824532	7.670099e-54	6.812538e-51
MsG0380013952.01	MsG0380014044.01	0.854916	8.945208e-62	2.029576e-58
MsG0380013952.01	MsG0380014050.01	0.828152	1.053792e-54	1.038786e-51
MsG0380013952.01	MsG0380014051.01	0.912306	2.264802e-83	5.063720e-79
MsG0380013952.01	MsG0380014054.01	0.812206	4.764504e-51	3.010491e-48
MsG0380013952.01	MsG0380014055.01	0.816625	5.022890e-52	3.577335e-49
MsG0380013952.01	MsG0380014057.01	0.894455	2.427709e-75	2.415867e-71
MsG0380013952.01	MsG0380015348.01	0.812266	4.621960e-51	2.925268e-48
MsG0380013952.01	MsG0380016424.01	0.809156	2.174864e-50	1.267388e-47
MsG0380013952.01	MsG0380017007.01	0.921845	2.118379e-88	7.747644e-84
MsG0380013952.01	MsG0480018296.01	0.892861	1.073520e-74	9.986974e-71
MsG0380013952.01	MsG0480020052.01	0.805476	1.310298e-49	6.938964e-47
MsG0380013952.01	MsG0480021054.01	0.805371	1.378948e-49	7.282715e-47
MsG0380013952.01	MsG0480021331.01	0.803052	4.190075e-49	2.084772e-46
MsG0380013952.01	MsG0580024570.01	0.800461	1.425935e-48	6.643219e-46
MsG0380013952.01	MsG0580027677.01	0.884856	1.341337e-71	8.994028e-68
MsG0380013952.01	MsG0680032339.01	0.822825	1.925794e-53	1.629773e-50
MsG0380013952.01	MsG0780038197.01	0.848421	6.195643e-60	1.136426e-56
MsG0380013952.01	MsG0780040316.01	0.897969	8.389330e-77	9.715677e-73
MsG0380013952.01	MsG0780040317.01	0.859335	4.441537e-63	1.168923e-59
MsG0380013952.01	MsG0780041296.01	0.804575	2.022907e-49	1.046691e-46
MsG0380013952.01	MsG0880044440.01	0.856985	2.221321e-62	5.398919e-59
MsG0380013952.01	MsG0880045097.01	0.804663	1.939328e-49	1.005739e-46
MsG0380013952.01	MsG0880045630.01	0.831187	1.924552e-55	2.072931e-52
MsG0280006475.01	MsG0380013952.01	0.807419	5.101197e-50	2.839938e-47
MsG0280007042.01	MsG0380013952.01	0.857714	1.351863e-62	3.367619e-59
MsG0280009733.01	MsG0380013952.01	0.820219	7.698548e-53	6.054576e-50
MsG0280009971.01	MsG0380013952.01	-0.820458	6.786930e-53	5.373346e-50
MsG0280010137.01	MsG0380013952.01	0.866858	2.095895e-65	7.169837e-62
MsG0280010143.01	MsG0380013952.01	0.816124	6.500614e-52	4.566813e-49
MsG0280010144.01	MsG0380013952.01	0.802388	5.744692e-49	2.810623e-46
MsG0280010145.01	MsG0380013952.01	0.920432	1.288797e-87	4.369655e-83

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013952.01.T01	MTR_7g021700	99.459	185	1	0	1	185	106	290	9.61e-122	357
MsG0380013952.01.T01	MTR_6g042200	98.315	178	3	0	8	185	383	560	1.97e-113	338
MsG0380013952.01.T01	MTR_4g006100	98.876	178	2	0	8	185	383	560	8.89e-113	342
MsG0380013952.01.T01	MTR_0002s0150	79.144	187	38	1	2	188	411	596	3.41e-94	286
MsG0380013952.01.T01	MTR_3g113820	80.000	185	8	2	1	185	1	156	1.21e-84	247

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013952.01.T01	ATCG01100	83.240	179	30	1	179	1	179	3.93e-98	288
MsG0380013952.01.T01	ATMG01275-2	42.453	106	61	47	152	23	128	6.69e-23	89.4
MsG0380013952.01.T01	AT2G07785	43.878	98	55	56	153	2	99	3.01e-21	84.0

Find 33 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAATTGATATTACTGATA+TGG	0.214930	3:-48499570	None:intergenic
GGACTTCTTATGTCAGGATA+TGG	0.218335	3:+48499692	MsG0380013952.01.T01:CDS
CCCGAATACGCTGGTCCTTT+TGG	0.250915	3:+48499452	MsG0380013952.01.T01:CDS
GATAAGACACATAGAGTTAA+TGG	0.275977	3:-48499782	None:intergenic
TCCAAAAGGACCAGCGTATT+CGG	0.297771	3:-48499453	None:intergenic
GAATCTTTCAAAGAGGTCTA+TGG	0.337868	3:+48499314	MsG0380013952.01.T01:CDS
AGCTCGTAGACCACCCAAAA+AGG	0.338031	3:-48499732	None:intergenic
AGTTATTCAGTAATTCCTTT+TGG	0.358580	3:+48499596	MsG0380013952.01.T01:CDS
AAGAGAATCTTATTCCATCT+AGG	0.379925	3:+48499516	MsG0380013952.01.T01:CDS
AAGAGGTCTATGGAATTCTA+TGG	0.381274	3:+48499324	MsG0380013952.01.T01:CDS
AAACGAATATCTCCCCTAGA+TGG	0.392761	3:-48499530	None:intergenic
CCAAAAGGACCAGCGTATTC+GGG	0.397012	3:-48499452	None:intergenic
CCCAATACAAGAATCAAAAT+AGG	0.405056	3:-48499356	None:intergenic
CCCATTGGACTTCTTATGTC+AGG	0.412953	3:+48499686	MsG0380013952.01.T01:CDS
GACTTCTTATGTCAGGATAT+GGG	0.454242	3:+48499693	MsG0380013952.01.T01:CDS
AGAGAATCTTATTCCATCTA+GGG	0.476104	3:+48499517	MsG0380013952.01.T01:CDS
GATATTCGTTTATTCAGTAT+CGG	0.488534	3:+48499542	MsG0380013952.01.T01:CDS
ATTTCGAGTATTGCTCCCAT+TGG	0.490306	3:+48499671	MsG0380013952.01.T01:CDS
TAAGTGTACTAGCAATTGTA+TGG	0.498343	3:+48499387	MsG0380013952.01.T01:CDS
AAAACAAAGTTATAGCCAAA+AGG	0.501030	3:-48499611	None:intergenic
TTAGAAAGAGAAATATCTGC+AGG	0.509446	3:+48499410	MsG0380013952.01.T01:CDS
GCAGGGATACAACAGCGTAT+TGG	0.516727	3:+48499428	MsG0380013952.01.T01:CDS
CTCTTTGAAAGATTCCAATC+CGG	0.519904	3:-48499306	None:intergenic
TCCTGACATAAGAAGTCCAA+TGG	0.542469	3:-48499687	None:intergenic
CGGATTGGAATCTTTCAAAG+AGG	0.552668	3:+48499307	MsG0380013952.01.T01:CDS
CCTGACATAAGAAGTCCAAT+GGG	0.565703	3:-48499686	None:intergenic
AGAGCTTGAAGAATTCCAAA+AGG	0.569368	3:-48499467	None:intergenic
ATTGATATTACTGATATGGA+TGG	0.591695	3:-48499566	None:intergenic
TGAAATGATAATTGATACAA+CGG	0.611394	3:+48499259	None:intergenic
GAGAATCTTATTCCATCTAG+GGG	0.627938	3:+48499518	MsG0380013952.01.T01:CDS
ATTCTTCAAGCTCTAGCAGA+CGG	0.642740	3:+48499476	MsG0380013952.01.T01:CDS
TAGAAAGAGAAATATCTGCA+GGG	0.656230	3:+48499411	MsG0380013952.01.T01:CDS
CGTATTGGACCCGAATACGC+TGG	0.662476	3:+48499443	MsG0380013952.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATAATAAATATTCCTTTT+TGG	+	Chr3:48499718-48499737	MsG0380013952.01.T01:CDS	10.0%
!!!	AATAATAAATATTCCTTTTT+GGG	+	Chr3:48499719-48499738	MsG0380013952.01.T01:CDS	10.0%
!!	TAGAATTGATATTACTGATA+TGG	-	Chr3:48499573-48499592	None:intergenic	20.0%
!!!	CAAGATATAAATTCTTTTTC+CGG	+	Chr3:48499287-48499306	MsG0380013952.01.T01:CDS	20.0%
!!!	GTTTTATCTGATTTCAATAT+CGG	+	Chr3:48499629-48499648	MsG0380013952.01.T01:CDS	20.0%
!	AAAACAAAGTTATAGCCAAA+AGG	-	Chr3:48499614-48499633	None:intergenic	25.0%
!	ATTGATATTACTGATATGGA+TGG	-	Chr3:48499569-48499588	None:intergenic	25.0%
!	CGGAAAAAGAATTTATATCT+TGG	-	Chr3:48499289-48499308	None:intergenic	25.0%
!	GATATTCGTTTATTCAGTAT+CGG	+	Chr3:48499542-48499561	MsG0380013952.01.T01:CDS	25.0%
!!	AGTTATTCAGTAATTCCTTT+TGG	+	Chr3:48499596-48499615	MsG0380013952.01.T01:CDS	25.0%
!!	TATAAATTCTTTTTCCGGAT+TGG	+	Chr3:48499292-48499311	MsG0380013952.01.T01:CDS	25.0%
!!!	AATAAATATTCCTTTTTGGG+TGG	+	Chr3:48499722-48499741	MsG0380013952.01.T01:CDS	25.0%
!!!	ACCTATTTTGATTCTTGTAT+TGG	+	Chr3:48499355-48499374	MsG0380013952.01.T01:CDS	25.0%
!!!	CCTATTTTGATTCTTGTATT+GGG	+	Chr3:48499356-48499375	MsG0380013952.01.T01:CDS	25.0%
!!!	TCAATATCGGTGTTTTTTTA+TGG	+	Chr3:48499642-48499661	MsG0380013952.01.T01:CDS	25.0%
	AAGAGAATCTTATTCCATCT+AGG	+	Chr3:48499516-48499535	MsG0380013952.01.T01:CDS	30.0%
	AGAGAATCTTATTCCATCTA+GGG	+	Chr3:48499517-48499536	MsG0380013952.01.T01:CDS	30.0%
	CCCAATACAAGAATCAAAAT+AGG	-	Chr3:48499359-48499378	None:intergenic	30.0%
	GATAAGACACATAGAGTTAA+TGG	-	Chr3:48499785-48499804	None:intergenic	30.0%
	TAAGTGTACTAGCAATTGTA+TGG	+	Chr3:48499387-48499406	MsG0380013952.01.T01:CDS	30.0%
	TAGAAAGAGAAATATCTGCA+GGG	+	Chr3:48499411-48499430	MsG0380013952.01.T01:CDS	30.0%
	TTAGAAAGAGAAATATCTGC+AGG	+	Chr3:48499410-48499429	MsG0380013952.01.T01:CDS	30.0%
	AAGAGGTCTATGGAATTCTA+TGG	+	Chr3:48499324-48499343	MsG0380013952.01.T01:CDS	35.0%
	AGAGCTTGAAGAATTCCAAA+AGG	-	Chr3:48499470-48499489	None:intergenic	35.0%
	GAATCTTTCAAAGAGGTCTA+TGG	+	Chr3:48499314-48499333	MsG0380013952.01.T01:CDS	35.0%
	GACTTCTTATGTCAGGATAT+GGG	+	Chr3:48499693-48499712	MsG0380013952.01.T01:CDS	35.0%
	GAGAATCTTATTCCATCTAG+GGG	+	Chr3:48499518-48499537	MsG0380013952.01.T01:CDS	35.0%
!	CTCTTTGAAAGATTCCAATC+CGG	-	Chr3:48499309-48499328	None:intergenic	35.0%
	AAACGAATATCTCCCCTAGA+TGG	-	Chr3:48499533-48499552	None:intergenic	40.0%
	CCTGACATAAGAAGTCCAAT+GGG	-	Chr3:48499689-48499708	None:intergenic	40.0%
	GGACTTCTTATGTCAGGATA+TGG	+	Chr3:48499692-48499711	MsG0380013952.01.T01:CDS	40.0%
	TCCTGACATAAGAAGTCCAA+TGG	-	Chr3:48499690-48499709	None:intergenic	40.0%
!	ATTCTTCAAGCTCTAGCAGA+CGG	+	Chr3:48499476-48499495	MsG0380013952.01.T01:CDS	40.0%
!	ATTTCGAGTATTGCTCCCAT+TGG	+	Chr3:48499671-48499690	MsG0380013952.01.T01:CDS	40.0%
!	CGGATTGGAATCTTTCAAAG+AGG	+	Chr3:48499307-48499326	MsG0380013952.01.T01:CDS	40.0%
	CCCATTGGACTTCTTATGTC+AGG	+	Chr3:48499686-48499705	MsG0380013952.01.T01:CDS	45.0%
	TCCAAAAGGACCAGCGTATT+CGG	-	Chr3:48499456-48499475	None:intergenic	45.0%
	AGCTCGTAGACCACCCAAAA+AGG	-	Chr3:48499735-48499754	None:intergenic	50.0%
	CCAAAAGGACCAGCGTATTC+GGG	-	Chr3:48499455-48499474	None:intergenic	50.0%
	GCAGGGATACAACAGCGTAT+TGG	+	Chr3:48499428-48499447	MsG0380013952.01.T01:CDS	50.0%
	CGTATTGGACCCGAATACGC+TGG	+	Chr3:48499443-48499462	MsG0380013952.01.T01:CDS	55.0%
!	CCCGAATACGCTGGTCCTTT+TGG	+	Chr3:48499452-48499471	MsG0380013952.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	48499263	48499829	48499263	ID=MsG0380013952.01;Name=MsG0380013952.01
Chr3	mRNA	48499263	48499829	48499263	ID=MsG0380013952.01.T01;Parent=MsG0380013952.01;Name=MsG0380013952.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|188
Chr3	exon	48499263	48499829	48499263	ID=MsG0380013952.01.T01:exon:30488;Parent=MsG0380013952.01.T01
Chr3	CDS	48499263	48499829	48499263	ID=MsG0380013952.01.T01:cds;Parent=MsG0380013952.01.T01

Gene Sequence

>MsG0380013952.01.T01

ATGATAATTGATACAACGGAAGTCCAAGATATAAATTCTTTTTCCGGATTGGAATCTTTCAAAGAGGTCTATGGAATTCTATGGATACTTGTACCTATTTTGATTCTTGTATTGGGAATCACAATAAGTGTACTAGCAATTGTATGGTTAGAAAGAGAAATATCTGCAGGGATACAACAGCGTATTGGACCCGAATACGCTGGTCCTTTTGGAATTCTTCAAGCTCTAGCAGACGGAACAAAACTACTATTCAAAGAGAATCTTATTCCATCTAGGGGAGATATTCGTTTATTCAGTATCGGACCATCCATATCAGTAATATCAATTCTAATAAGTTATTCAGTAATTCCTTTTGGCTATAACTTTGTTTTATCTGATTTCAATATCGGTGTTTTTTTATGGATTGCTATTTCGAGTATTGCTCCCATTGGACTTCTTATGTCAGGATATGGGTCAAATAATAAATATTCCTTTTTGGGTGGTCTACGAGCTGCTGCTCAATCGATTAGTTATGAAATACCATTAACTCTATGTGTCTTATCAATATCTCTACGTGCGATTCGTTGA

Protein sequence

>MsG0380013952.01.T01

MIIDTTEVQDINSFSGLESFKEVYGILWILVPILILVLGITISVLAIVWLEREISAGIQQRIGPEYAGPFGILQALADGTKLLFKENLIPSRGDIRLFSIGPSISVISILISYSVIPFGYNFVLSDFNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRAIR*