AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040216.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040216.01.T01 MTR_7g086460 85.484 558 20 4 1 537 1 518 0.0 941
MsG0780040216.01.T01 MTR_5g015280 31.291 457 275 11 84 515 36 478 3.38e-60 206
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040216.01.T01 AT1G28760 47.797 454 179 12 111 533 49 475 4.32e-132 393
MsG0780040216.01.T01 AT5G67610 32.826 460 253 11 85 513 39 473 1.69e-66 223
MsG0780040216.01.T01 AT5G67610 32.826 460 253 11 85 513 51 485 2.60e-66 223
MsG0780040216.01.T01 AT3G49840 30.512 508 264 17 38 513 4 454 1.52e-54 191
MsG0780040216.01.T01 AT3G49840 30.906 508 263 19 38 513 4 455 5.93e-54 189

Find 120 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACTTCTGGGACTCAATT+AGG 0.139513 7:+74505939 MsG0780040216.01.T01:CDS
TGTATCTCCTTCCTTACTTT+TGG 0.163842 7:+74502356 MsG0780040216.01.T01:CDS
TGTGAGCGCGTTCAAGTTTC+TGG 0.164433 7:+74502417 MsG0780040216.01.T01:CDS
CAGGAAGTGGAAATGGATTT+TGG 0.174652 7:+74506183 MsG0780040216.01.T01:CDS
GGTGTTGTATCACCATCTTC+TGG 0.180077 7:+74505906 MsG0780040216.01.T01:intron
TGTGAACTTCTTTCTGTTGC+CGG 0.253295 7:-74505991 None:intergenic
GAGATTGCATAACAAAATTA+AGG 0.256111 7:+74502515 MsG0780040216.01.T01:CDS
CTGGAGCTGCTTTAGGCTAC+TGG 0.290809 7:+74503997 MsG0780040216.01.T01:CDS
AAACTTCTGGGACTCAATTA+GGG 0.296814 7:+74505940 MsG0780040216.01.T01:CDS
ATTGAACTGCTATAATAAAA+TGG 0.300837 7:-74502998 None:intergenic
GGTTGCTCTTTCTGTACTAC+TGG 0.305584 7:+74503962 MsG0780040216.01.T01:intron
CAATGTGGAACAACCCTAAA+AGG 0.312072 7:+74505195 MsG0780040216.01.T01:CDS
AAATGGGCAATGCGCGTTAT+TGG 0.321806 7:+74504086 MsG0780040216.01.T01:CDS
ACGATCCAGTCAGTGAATTC+TGG 0.325513 7:-74506080 None:intergenic
GATTGTTCAGGCTTACAGTT+TGG 0.335474 7:-74506377 None:intergenic
GAACAATCATGTCAAATCTA+TGG 0.349932 7:+74506392 MsG0780040216.01.T01:three_prime_UTR
TTGTTACCTTTGAGCGTGAT+AGG 0.350172 7:-74501761 None:intergenic
AACAGTAACGAATGTAATTT+AGG 0.354262 7:+74506283 MsG0780040216.01.T01:three_prime_UTR
TGTACTACTGGGTATCATCT+TGG 0.358173 7:+74503974 MsG0780040216.01.T01:CDS
TAGATTTGACATGATTGTTC+AGG 0.364828 7:-74506389 None:intergenic
AAACATAACTTGCACACATT+TGG 0.369840 7:-74502256 None:intergenic
GTGTTGTATCACCATCTTCT+GGG 0.371482 7:+74505907 MsG0780040216.01.T01:CDS
GGGGTGTACAGAAAGGGATT+TGG 0.386641 7:+74502694 MsG0780040216.01.T01:CDS
ATTCAATTCTTCAGAGTCTT+GGG 0.388913 7:+74503362 MsG0780040216.01.T01:CDS
TACTCTTGCAGTTGGAGCCT+TGG 0.388943 7:+74504522 MsG0780040216.01.T01:CDS
TATAGCAGTTCAATGGCTAT+AGG 0.395624 7:+74503007 MsG0780040216.01.T01:CDS
TAATTCATTGCATGTTACTT+TGG 0.398470 7:+74502470 MsG0780040216.01.T01:CDS
AATTTACGATCATAGAGAAT+TGG 0.399637 7:-74503342 None:intergenic
GGCTCCAATTGTTAGCAGTT+GGG 0.402028 7:+74502973 MsG0780040216.01.T01:CDS
AATTCAATTCTTCAGAGTCT+TGG 0.407150 7:+74503361 MsG0780040216.01.T01:CDS
GGGTTGCTCAGTTTGTGAAA+TGG 0.409305 7:+74504069 MsG0780040216.01.T01:CDS
CAAAGCAAGCTTTAGCTGAA+TGG 0.415906 7:+74506048 MsG0780040216.01.T01:CDS
ACAGAGGCAGGAAGTGGAAA+TGG 0.422390 7:+74506176 MsG0780040216.01.T01:CDS
TGGCTCCAATTGTTAGCAGT+TGG 0.424714 7:+74502972 MsG0780040216.01.T01:CDS
GGTTGCTCAGTTTGTGAAAT+GGG 0.425437 7:+74504070 MsG0780040216.01.T01:CDS
ACTGCTTCCGAGCGAGAGTT+CGG 0.428570 7:+74506124 MsG0780040216.01.T01:CDS
TGGATTGATATTGCTGCTGT+TGG 0.429242 7:+74502952 MsG0780040216.01.T01:CDS
GGTGAGAGGAACCCGTGGTC+GGG 0.430495 7:+74505103 MsG0780040216.01.T01:CDS
CAATACAATTGCTTCATGAA+TGG 0.432133 7:+74504578 MsG0780040216.01.T01:CDS
ATGATGATTATTCACTAGAA+TGG 0.434162 7:+74505081 MsG0780040216.01.T01:CDS
AGGAGAAGATTGATCATTGT+TGG 0.439643 7:-74501741 None:intergenic
ATCTTGGCTGGAGCTGCTTT+AGG 0.440307 7:+74503990 MsG0780040216.01.T01:CDS
GGAACCCAACTGCTAACAAT+TGG 0.440479 7:-74502977 None:intergenic
AGAAGTTCACAAAGGAAGAA+TGG 0.440891 7:+74506003 MsG0780040216.01.T01:CDS
TTCAGCTAAAGCTTGCTTTG+TGG 0.441989 7:-74506045 None:intergenic
CTTTAGGCTACTGGATTGTC+AGG 0.442622 7:+74504006 MsG0780040216.01.T01:CDS
CAAGATCGATTGTGAAATAC+CGG 0.445444 7:+74502758 MsG0780040216.01.T01:CDS
CGCCTCATTAGTCTTGCAGT+TGG 0.453752 7:+74502932 MsG0780040216.01.T01:CDS
GAAGTTCACAAAGGAAGAAT+GGG 0.457343 7:+74506004 MsG0780040216.01.T01:CDS
CTTTAGGAGGTGACTTGCTA+AGG 0.458852 7:-74505133 None:intergenic
AATTGAGTCCCAGAAGTTTG+TGG 0.462194 7:-74505936 None:intergenic
GTTACAGTTGCACTTAAAGA+AGG 0.464576 7:+74502786 MsG0780040216.01.T01:CDS
TGATATTGAAAGTCCAACTT+TGG 0.466308 7:+74502332 MsG0780040216.01.T01:CDS
TCTTTCTGTTGCCGGTCTTG+TGG 0.469024 7:-74505983 None:intergenic
TCATAGAGAATTGGTGCAAA+AGG 0.472297 7:-74503333 None:intergenic
ATCAGACTGCCCCAAAAGTA+AGG 0.473066 7:-74502367 None:intergenic
AAAGCAAGCTTTAGCTGAAT+GGG 0.473252 7:+74506049 MsG0780040216.01.T01:CDS
CTTGATAATACTCTTGCAGT+TGG 0.479961 7:+74504514 MsG0780040216.01.T01:CDS
TTTGTTATTTCAAAAGAAGA+TGG 0.483979 7:+74504032 MsG0780040216.01.T01:CDS
TGATGATTATTCACTAGAAT+GGG 0.484137 7:+74505082 MsG0780040216.01.T01:CDS
GATATTGAAAGTCCAACTTT+GGG 0.484800 7:+74502333 MsG0780040216.01.T01:CDS
GAATCGGATTCCACAGAGGC+AGG 0.485362 7:+74506164 MsG0780040216.01.T01:CDS
GACTGGAGGGGTGTACAGAA+AGG 0.493026 7:+74502687 MsG0780040216.01.T01:CDS
AAGCGCCATCAGCAAATTCA+AGG 0.494398 7:+74501652 MsG0780040216.01.T01:CDS
AGTGAAAAGAAGAAATGCAT+TGG 0.503895 7:-74501790 None:intergenic
TATTCAACATTCCACAAGAC+CGG 0.507281 7:+74505972 MsG0780040216.01.T01:CDS
CTACTGGGTATCATCTTGGC+TGG 0.511645 7:+74503978 MsG0780040216.01.T01:CDS
CTTAGCAAGTCACCTCCTAA+AGG 0.513329 7:+74505134 MsG0780040216.01.T01:CDS
CTCTCAGGAATTGCAACAGA+TGG 0.513447 7:-74502495 None:intergenic
TCAACATATCTAGTTTCATA+AGG 0.515189 7:-74502732 None:intergenic
GATTCCACAGAGGCAGGAAG+TGG 0.517050 7:+74506170 MsG0780040216.01.T01:CDS
ATTTCCACTTCCTGCCTCTG+TGG 0.523838 7:-74506174 None:intergenic
AAGGAATTCCGCCCGACCAC+GGG 0.524500 7:-74505114 None:intergenic
AAGATGGCAGTGTAGATGCC+GGG 0.526101 7:+74504048 MsG0780040216.01.T01:CDS
ATGTGCAGGAATAATACTCT+TGG 0.528936 7:+74502642 MsG0780040216.01.T01:intron
GTCTCGTCCGAACTCTCGCT+CGG 0.529462 7:-74506131 None:intergenic
GAGAGGAACCCGTGGTCGGG+CGG 0.540107 7:+74505106 MsG0780040216.01.T01:CDS
GCTTACAGTTTGGAAAATCC+AGG 0.540329 7:-74506367 None:intergenic
CGAGACAATGGAGAGTGAAT+CGG 0.541615 7:+74506148 MsG0780040216.01.T01:CDS
GAGTGAAGAGATGCACAATC+CGG 0.541797 7:+74503387 MsG0780040216.01.T01:CDS
GTCAGTGTGAAAAGGATGAC+TGG 0.542317 7:+74502670 MsG0780040216.01.T01:CDS
GAAGATGGCAGTGTAGATGC+CGG 0.547920 7:+74504047 MsG0780040216.01.T01:CDS
CGAGAGTTCGGACGAGACAA+TGG 0.548252 7:+74506136 MsG0780040216.01.T01:CDS
GAAGGAGATACACCCAAAGT+TGG 0.548963 7:-74502345 None:intergenic
GCAACCCTTGAATTTGCTGA+TGG 0.558035 7:-74501657 None:intergenic
TGTGGCGAAAACCCAGAAGA+TGG 0.564971 7:-74505918 None:intergenic
GTTGCTCTTTCTGTACTACT+GGG 0.565412 7:+74503963 MsG0780040216.01.T01:CDS
AGTGCTTGCGTTACAACTGC+AGG 0.566216 7:+74502306 MsG0780040216.01.T01:CDS
CATCTCCAGAATTCACTGAC+TGG 0.568556 7:+74506075 MsG0780040216.01.T01:CDS
GACTGCCCCAAAAGTAAGGA+AGG 0.573761 7:-74502363 None:intergenic
ACTGGAGGGGTGTACAGAAA+GGG 0.573841 7:+74502688 MsG0780040216.01.T01:CDS
TGGTCTGACTCTCCTGTGAG+AGG 0.576376 7:+74505224 MsG0780040216.01.T01:CDS
TAAGGAATTCCGCCCGACCA+CGG 0.576853 7:-74505115 None:intergenic
GGGTGAGAGGAACCCGTGGT+CGG 0.579700 7:+74505102 MsG0780040216.01.T01:CDS
ATGTGGAATAGCCCTAAAAG+TGG 0.582042 7:+74505161 MsG0780040216.01.T01:CDS
TCTTCTCCTATCACGCTCAA+AGG 0.585658 7:+74501755 MsG0780040216.01.T01:CDS
TGGATGGTGTCAGTGTGAAA+AGG 0.597753 7:+74502662 MsG0780040216.01.T01:CDS
TTGGGGCAGTCTGATACTCA+AGG 0.597921 7:+74502375 MsG0780040216.01.T01:CDS
TTTCACAAACTGAGCAACCC+CGG 0.604583 7:-74504066 None:intergenic
ATCCAACTGCAAGACTAATG+AGG 0.607041 7:-74502934 None:intergenic
GGTATCTCAAGATTGAAGCT+CGG 0.614150 7:+74502438 MsG0780040216.01.T01:CDS
TGGAAAGACATACCTCTCAC+AGG 0.621342 7:-74505236 None:intergenic
GGATCGTTGACCATGCAGAT+CGG 0.623735 7:+74506096 MsG0780040216.01.T01:CDS
GTTGGCGAGTGAAGAAGTGA+AGG 0.631703 7:-74501723 None:intergenic
GTGTGAAAAGGATGACTGGA+GGG 0.637824 7:+74502674 MsG0780040216.01.T01:CDS
AGCGCCATCAGCAAATTCAA+GGG 0.640054 7:+74501653 MsG0780040216.01.T01:CDS
ACAACCCTAAAAGGACGTCA+TGG 0.645076 7:+74505204 MsG0780040216.01.T01:CDS
AACTTCTGGGACTCAATTAG+GGG 0.646073 7:+74505941 MsG0780040216.01.T01:CDS
TATTCACTAGAATGGGTGAG+AGG 0.650160 7:+74505089 MsG0780040216.01.T01:CDS
AGATGGCAGTGTAGATGCCG+GGG 0.652953 7:+74504049 MsG0780040216.01.T01:CDS
AGTGCAACTGTAACTGAACC+CGG 0.653087 7:-74502777 None:intergenic
AACAGCTCCACAAAAGACCA+AGG 0.662563 7:-74504539 None:intergenic
GCAGGAATAATACTCTTGGA+TGG 0.680449 7:+74502646 MsG0780040216.01.T01:intron
AAGATCGATTGTGAAATACC+GGG 0.694905 7:+74502759 MsG0780040216.01.T01:CDS
CAACAGAAAGAAGTTCACAA+AGG 0.699080 7:+74505995 MsG0780040216.01.T01:CDS
GTGGCTCTAAAGCAACAATG+TGG 0.703894 7:+74505180 MsG0780040216.01.T01:CDS
AGTGTGAAAAGGATGACTGG+AGG 0.709404 7:+74502673 MsG0780040216.01.T01:CDS
TGTGAAAAGGATGACTGGAG+GGG 0.715947 7:+74502675 MsG0780040216.01.T01:CDS
GAATGGGTGAGAGGAACCCG+TGG 0.719365 7:+74505098 MsG0780040216.01.T01:CDS
GAGTGAATCGGATTCCACAG+AGG 0.750499 7:+74506160 MsG0780040216.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTTAAAAAAAAAAT+TGG - Chr7:74501874-74501893 None:intergenic 0.0%
!! AAAAAAAAATCAGAATAAAT+AGG - Chr7:74504474-74504493 None:intergenic 10.0%
!! AAAAAAAATCAGAATAAATA+GGG - Chr7:74504473-74504492 None:intergenic 10.0%
!! AAAAATATAAAAAATGATTC+TGG - Chr7:74505377-74505396 None:intergenic 10.0%
!! ATATATGTATATCTTATATA+CGG + Chr7:74503578-74503597 MsG0780040216.01.T01:intron 10.0%
!! TAAATTATTATATACTGAAA+GGG - Chr7:74503778-74503797 None:intergenic 10.0%
!! TTAAATTATTATATACTGAA+AGG - Chr7:74503779-74503798 None:intergenic 10.0%
!!! TAAGATTTTTTAAAATTTCT+TGG + Chr7:74505655-74505674 MsG0780040216.01.T01:intron 10.0%
!!! TTTTCATTTTTACATAATAT+AGG + Chr7:74504846-74504865 MsG0780040216.01.T01:intron 10.0%
!! AAAAAAATCAGAATAAATAG+GGG - Chr7:74504472-74504491 None:intergenic 15.0%
!! AAATAATGATAAAATAACAC+AGG - Chr7:74504942-74504961 None:intergenic 15.0%
!! AAATTATTATATACTGAAAG+GGG - Chr7:74503777-74503796 None:intergenic 15.0%
!!! AATCCATTTCTTTATTTATT+TGG + Chr7:74504430-74504449 MsG0780040216.01.T01:intron 15.0%
!!! ATAAATTGTTGCATTTTTTA+TGG + Chr7:74503438-74503457 MsG0780040216.01.T01:intron 15.0%
!!! TAAAATTTTGTTGATTGTAA+TGG + Chr7:74505587-74505606 MsG0780040216.01.T01:intron 15.0%
!! AAAAAGACATATATTGGTAT+TGG + Chr7:74504345-74504364 MsG0780040216.01.T01:intron 20.0%
!! AAAAATCTTAAAACTAGCAA+AGG - Chr7:74505645-74505664 None:intergenic 20.0%
!! AAAGCACATAATCTTATTAT+AGG + Chr7:74504783-74504802 MsG0780040216.01.T01:intron 20.0%
!! AATTACCTTTGTATTATACA+TGG + Chr7:74503070-74503089 MsG0780040216.01.T01:intron 20.0%
!! AGTTAGAAAAAGACATATAT+TGG + Chr7:74504339-74504358 MsG0780040216.01.T01:intron 20.0%
!! ATGATATTATTTGATTCTTC+TGG + Chr7:74505615-74505634 MsG0780040216.01.T01:intron 20.0%
!! ATTGAACTGCTATAATAAAA+TGG - Chr7:74503001-74503020 None:intergenic 20.0%
!! CAACCAAATAAATAAAGAAA+TGG - Chr7:74504436-74504455 None:intergenic 20.0%
!! CATAACACAAAAGTAATATT+AGG - Chr7:74503290-74503309 None:intergenic 20.0%
!! GAAGAATCAAATAATATCAT+AGG - Chr7:74505615-74505634 None:intergenic 20.0%
!! GTAAAACATAATAAGACAAA+AGG - Chr7:74502219-74502238 None:intergenic 20.0%
!! TAAGAAAAATATCTACATGT+TGG - Chr7:74506342-74506361 None:intergenic 20.0%
!! TATCTAACAAAAAAATAGAC+AGG - Chr7:74503421-74503440 None:intergenic 20.0%
!! TATTTCATAAGAAGAATTGA+CGG - Chr7:74503922-74503941 None:intergenic 20.0%
!!! AAAGTATTAATAAAGCTGAA+AGG - Chr7:74504618-74504637 None:intergenic 20.0%
!!! AAATTAAGGTTTGTTTTCAT+AGG + Chr7:74502529-74502548 MsG0780040216.01.T01:CDS 20.0%
!!! ATATAATAAGGTTTTCTCTT+TGG + Chr7:74503692-74503711 MsG0780040216.01.T01:intron 20.0%
!!! ATTTTATTATAGCAGTTCAA+TGG + Chr7:74503000-74503019 MsG0780040216.01.T01:CDS 20.0%
!!! CAGAAATTGATTTTTTCATA+GGG + Chr7:74506254-74506273 MsG0780040216.01.T01:three_prime_UTR 20.0%
!!! CATTATAATCATTCTTTTTC+AGG + Chr7:74503042-74503061 MsG0780040216.01.T01:CDS 20.0%
!!! TATAATAAGGTTTTCTCTTT+GGG + Chr7:74503693-74503712 MsG0780040216.01.T01:intron 20.0%
!!! TTTGTTATTTCAAAAGAAGA+TGG + Chr7:74504032-74504051 MsG0780040216.01.T01:CDS 20.0%
! AAAACAGTAAAAACAGCATA+TGG - Chr7:74504890-74504909 None:intergenic 25.0%
! AAACAGTAAAAACAGCATAT+GGG - Chr7:74504889-74504908 None:intergenic 25.0%
! AACAGTAACGAATGTAATTT+AGG + Chr7:74506283-74506302 MsG0780040216.01.T01:three_prime_UTR 25.0%
! AACATCTATATTGAACATCT+AGG + Chr7:74503519-74503538 MsG0780040216.01.T01:intron 25.0%
! AAGAAACTGGTTAGAAAAAT+TGG - Chr7:74503119-74503138 None:intergenic 25.0%
! AATTTACGATCATAGAGAAT+TGG - Chr7:74503345-74503364 None:intergenic 25.0%
! ATGAAAAAATCAATTTCTGC+TGG - Chr7:74506253-74506272 None:intergenic 25.0%
! ATGATGATTATTCACTAGAA+TGG + Chr7:74505081-74505100 MsG0780040216.01.T01:CDS 25.0%
! ATTATATTTCAAAGATCGCA+TGG - Chr7:74503679-74503698 None:intergenic 25.0%
! ATTTGAAGATTTATATGAGC+TGG + Chr7:74502050-74502069 MsG0780040216.01.T01:intron 25.0%
! CGACTATTTCAAGATTTATA+TGG + Chr7:74502101-74502120 MsG0780040216.01.T01:intron 25.0%
! GAAATCCATGTATAATACAA+AGG - Chr7:74503078-74503097 None:intergenic 25.0%
! GAGATTGCATAACAAAATTA+AGG + Chr7:74502515-74502534 MsG0780040216.01.T01:CDS 25.0%
! GATGTTCAATATAGATGTTA+AGG - Chr7:74503518-74503537 None:intergenic 25.0%
! TGATGATTATTCACTAGAAT+GGG + Chr7:74505082-74505101 MsG0780040216.01.T01:CDS 25.0%
! TGTCAAAAAAAAAACTGAAG+TGG + Chr7:74505418-74505437 MsG0780040216.01.T01:intron 25.0%
! TTATCACATATCAACAAGAT+TGG - Chr7:74505259-74505278 None:intergenic 25.0%
! TTGAAGTTTGTAATTTATGC+AGG + Chr7:74505042-74505061 MsG0780040216.01.T01:intron 25.0%
! TTGAATGAATGATCTTTGAT+GGG - Chr7:74504982-74505001 None:intergenic 25.0%
! TTTCTTGATGTGATTCTATT+GGG + Chr7:74502003-74502022 MsG0780040216.01.T01:intron 25.0%
!! AGATTTTGTCTACCAAAATA+TGG + Chr7:74505306-74505325 MsG0780040216.01.T01:intron 25.0%
!! GATTTTGTCTACCAAAATAT+GGG + Chr7:74505307-74505326 MsG0780040216.01.T01:intron 25.0%
!! TAATTCATTGCATGTTACTT+TGG + Chr7:74502470-74502489 MsG0780040216.01.T01:CDS 25.0%
!! TCAACATATCTAGTTTCATA+AGG - Chr7:74502735-74502754 None:intergenic 25.0%
!!! ATGGATTTTGGCTTTTTAAT+TGG + Chr7:74506195-74506214 MsG0780040216.01.T01:CDS 25.0%
!!! ATTGATTTTTTCATAGGGTT+AGG + Chr7:74506259-74506278 MsG0780040216.01.T01:three_prime_UTR 25.0%
!!! GCAGAAATTGATTTTTTCAT+AGG + Chr7:74506253-74506272 MsG0780040216.01.T01:three_prime_UTR 25.0%
!!! GCGATCTTTGAAATATAATA+AGG + Chr7:74503680-74503699 MsG0780040216.01.T01:intron 25.0%
!!! TTTTGTGTTATGTTTTAGCT+TGG + Chr7:74503298-74503317 MsG0780040216.01.T01:intron 25.0%
AAAAAACCAACCAAAAGGAT+TGG - Chr7:74503548-74503567 None:intergenic 30.0%
AAAAACCAACCAAAAGGATT+GGG - Chr7:74503547-74503566 None:intergenic 30.0%
AAACTGGTTAGAAAAATTGG+AGG - Chr7:74503116-74503135 None:intergenic 30.0%
AAATCTTCCATTCAGATAGA+TGG + Chr7:74505526-74505545 MsG0780040216.01.T01:intron 30.0%
AATTCAATTCTTCAGAGTCT+TGG + Chr7:74503361-74503380 MsG0780040216.01.T01:CDS 30.0%
ACTTTATCCATCTATCTGAA+TGG - Chr7:74505536-74505555 None:intergenic 30.0%
AGTGAAAAGAAGAAATGCAT+TGG - Chr7:74501793-74501812 None:intergenic 30.0%
ATTCAATTCTTCAGAGTCTT+GGG + Chr7:74503362-74503381 MsG0780040216.01.T01:CDS 30.0%
ATTTGTTTCGTTGCACTTTA+GGG + Chr7:74501891-74501910 MsG0780040216.01.T01:intron 30.0%
CAATACAATTGCTTCATGAA+TGG + Chr7:74504578-74504597 MsG0780040216.01.T01:CDS 30.0%
CAATTATAGAAGCTGAGTTA+TGG - Chr7:74505505-74505524 None:intergenic 30.0%
CATCAAAGATCATTCATTCA+AGG + Chr7:74504981-74505000 MsG0780040216.01.T01:intron 30.0%
CTTGAATGAATGATCTTTGA+TGG - Chr7:74504983-74505002 None:intergenic 30.0%
CTTGTTTCCTAGATAGTAAT+TGG + Chr7:74502183-74502202 MsG0780040216.01.T01:intron 30.0%
GAAAGAAGAGAAAAAGAACA+AGG - Chr7:74501700-74501719 None:intergenic 30.0%
GAACAATCATGTCAAATCTA+TGG + Chr7:74506392-74506411 MsG0780040216.01.T01:three_prime_UTR 30.0%
GATATTGAAAGTCCAACTTT+GGG + Chr7:74502333-74502352 MsG0780040216.01.T01:CDS 30.0%
GTTTCTTGATGTGATTCTAT+TGG + Chr7:74502002-74502021 MsG0780040216.01.T01:intron 30.0%
TAGATTTGACATGATTGTTC+AGG - Chr7:74506392-74506411 None:intergenic 30.0%
TGAAGAAAAAACCAACCAAA+AGG - Chr7:74503553-74503572 None:intergenic 30.0%
TGATATTGAAAGTCCAACTT+TGG + Chr7:74502332-74502351 MsG0780040216.01.T01:CDS 30.0%
TTCCTGTACATTACCATATA+TGG + Chr7:74503187-74503206 MsG0780040216.01.T01:intron 30.0%
! AAACATAACTTGCACACATT+TGG - Chr7:74502259-74502278 None:intergenic 30.0%
! AATTTGTTTCGTTGCACTTT+AGG + Chr7:74501890-74501909 MsG0780040216.01.T01:intron 30.0%
! AGTAGATGAAATGGTTTTCA+TGG + Chr7:74504703-74504722 MsG0780040216.01.T01:intron 30.0%
! ATACGGTGAGCTAAATTTTT+GGG + Chr7:74503595-74503614 MsG0780040216.01.T01:intron 30.0%
! ATATTTCCCATTTTCTGACA+CGG - Chr7:74502822-74502841 None:intergenic 30.0%
! ATCCATATATGGTAATGTAC+AGG - Chr7:74503192-74503211 None:intergenic 30.0%
! ATTCAGTAGGCATAATTTTC+GGG - Chr7:74505350-74505369 None:intergenic 30.0%
! CATTCAGTAGGCATAATTTT+CGG - Chr7:74505351-74505370 None:intergenic 30.0%
! CTATTCCACATTTTTCCTTT+AGG - Chr7:74505152-74505171 None:intergenic 30.0%
! GATATTTTTCTTACTTTGCC+TGG + Chr7:74506349-74506368 MsG0780040216.01.T01:three_prime_UTR 30.0%
! TATACGGTGAGCTAAATTTT+TGG + Chr7:74503594-74503613 MsG0780040216.01.T01:intron 30.0%
! TTTTCACTGTCTTCTTTCTA+GGG + Chr7:74501805-74501824 MsG0780040216.01.T01:intron 30.0%
!! ATTGGTAATGATTCTGAAAG+TGG + Chr7:74504363-74504382 MsG0780040216.01.T01:intron 30.0%
!! ATTTTGTTATGCAATCTCTC+AGG - Chr7:74502513-74502532 None:intergenic 30.0%
!! TGCATTTGCATAGTCATTTT+AGG + Chr7:74504660-74504679 MsG0780040216.01.T01:intron 30.0%
!! TTATAGTGGATCAGAATTCA+GGG - Chr7:74505469-74505488 None:intergenic 30.0%
!! TTTATAGTGGATCAGAATTC+AGG - Chr7:74505470-74505489 None:intergenic 30.0%
!!! AGGAAATTTTTTCTTCCAGT+TGG - Chr7:74503172-74503191 None:intergenic 30.0%
AAATAGACAGGTACACTTAC+CGG - Chr7:74503409-74503428 None:intergenic 35.0%
AAATTGGAGAAAGAAACCCT+AGG - Chr7:74501858-74501877 None:intergenic 35.0%
AAGATCGATTGTGAAATACC+GGG + Chr7:74502759-74502778 MsG0780040216.01.T01:CDS 35.0%
AATTCAGGGCATATGCATAT+TGG - Chr7:74505455-74505474 None:intergenic 35.0%
ACACACCAAATTCCATATGA+TGG - Chr7:74503892-74503911 None:intergenic 35.0%
AGAAAGAAACCCTAGGAAAA+AGG - Chr7:74501851-74501870 None:intergenic 35.0%
AGAAGTTCACAAAGGAAGAA+TGG + Chr7:74506003-74506022 MsG0780040216.01.T01:CDS 35.0%
AGAGAAAAAGAACAAGGTTG+AGG - Chr7:74501694-74501713 None:intergenic 35.0%
AGGAGAAGATTGATCATTGT+TGG - Chr7:74501744-74501763 None:intergenic 35.0%
AGTGACACCAATTACTATCT+AGG - Chr7:74502193-74502212 None:intergenic 35.0%
ATATTTCAAAGATCGCATGG+TGG - Chr7:74503676-74503695 None:intergenic 35.0%
ATGTGCAGGAATAATACTCT+TGG + Chr7:74502642-74502661 MsG0780040216.01.T01:intron 35.0%
CAAAACATGTCACATATGAC+AGG - Chr7:74504189-74504208 None:intergenic 35.0%
CAACAGAAAGAAGTTCACAA+AGG + Chr7:74505995-74506014 MsG0780040216.01.T01:CDS 35.0%
CAAGATCGATTGTGAAATAC+CGG + Chr7:74502758-74502777 MsG0780040216.01.T01:CDS 35.0%
CATTACCATATATGGATCAG+TGG + Chr7:74503195-74503214 MsG0780040216.01.T01:intron 35.0%
GAAGTTCACAAAGGAAGAAT+GGG + Chr7:74506004-74506023 MsG0780040216.01.T01:CDS 35.0%
GGTATGAAATTATTGCCAAC+TGG + Chr7:74503154-74503173 MsG0780040216.01.T01:intron 35.0%
GTCTTCCATCATATGGAATT+TGG + Chr7:74503884-74503903 MsG0780040216.01.T01:intron 35.0%
GTTACAGTTGCACTTAAAGA+AGG + Chr7:74502786-74502805 MsG0780040216.01.T01:CDS 35.0%
TAATTCGCTTTCTCTGTTTC+AGG + Chr7:74505885-74505904 MsG0780040216.01.T01:intron 35.0%
TATAGCAGTTCAATGGCTAT+AGG + Chr7:74503007-74503026 MsG0780040216.01.T01:CDS 35.0%
TATTCAACATTCCACAAGAC+CGG + Chr7:74505972-74505991 MsG0780040216.01.T01:CDS 35.0%
TCATAGAGAATTGGTGCAAA+AGG - Chr7:74503336-74503355 None:intergenic 35.0%
TGATGTGATTCTATTGGGTT+TGG + Chr7:74502008-74502027 MsG0780040216.01.T01:intron 35.0%
TTGGTAGACAAAATCTTGCT+TGG - Chr7:74505302-74505321 None:intergenic 35.0%
TTTCTGATTTCTTGACCTCT+GGG + Chr7:74505686-74505705 MsG0780040216.01.T01:intron 35.0%
TTTCTTCCGTGTCAGAAAAT+GGG + Chr7:74502813-74502832 MsG0780040216.01.T01:intron 35.0%
! AAAGCAAGCTTTAGCTGAAT+GGG + Chr7:74506049-74506068 MsG0780040216.01.T01:CDS 35.0%
! AAGACAGACTACCCATATTT+TGG - Chr7:74505321-74505340 None:intergenic 35.0%
! ACTTTACCTCTATGATTTGC+AGG + Chr7:74503941-74503960 MsG0780040216.01.T01:intron 35.0%
! CATATGTGACATGTTTTGCT+AGG + Chr7:74504191-74504210 MsG0780040216.01.T01:intron 35.0%
! CTTGATAATACTCTTGCAGT+TGG + Chr7:74504514-74504533 MsG0780040216.01.T01:CDS 35.0%
! CTTTTCACTGTCTTCTTTCT+AGG + Chr7:74501804-74501823 MsG0780040216.01.T01:intron 35.0%
! GACATCAAAGTGCTTTATAG+TGG - Chr7:74505483-74505502 None:intergenic 35.0%
! GTGCTATTACTGAAAACAAG+TGG + Chr7:74505809-74505828 MsG0780040216.01.T01:intron 35.0%
! TCATTCATTCAAGGCATTCA+AGG + Chr7:74504990-74505009 MsG0780040216.01.T01:intron 35.0%
! TGATTCTGGTTACATTCAGT+AGG - Chr7:74505363-74505382 None:intergenic 35.0%
! TGTATCTCCTTCCTTACTTT+TGG + Chr7:74502356-74502375 MsG0780040216.01.T01:CDS 35.0%
! TTCCACATTTTTCCTTTAGG+AGG - Chr7:74505149-74505168 None:intergenic 35.0%
!! AAACTTCTGGGACTCAATTA+GGG + Chr7:74505940-74505959 MsG0780040216.01.T01:CDS 35.0%
!! AATTGCTGTTTCTTATGTGC+AGG + Chr7:74502628-74502647 MsG0780040216.01.T01:intron 35.0%
!! ATATTTTTGATGCAGCTGCA+CGG + Chr7:74504398-74504417 MsG0780040216.01.T01:intron 35.0%
!! GTATCTCCTTCCTTACTTTT+GGG + Chr7:74502357-74502376 MsG0780040216.01.T01:CDS 35.0%
!! TATCTCCTTCCTTACTTTTG+GGG + Chr7:74502358-74502377 MsG0780040216.01.T01:CDS 35.0%
!! TGCTAACAACTTGCTACTAA+GGG + Chr7:74504726-74504745 MsG0780040216.01.T01:intron 35.0%
!! TGGTGAGTTTGGTTCATTTT+TGG + Chr7:74503215-74503234 MsG0780040216.01.T01:intron 35.0%
!!! TGGAACTACTTTTGTTTTGC+AGG + Chr7:74504106-74504125 MsG0780040216.01.T01:CDS 35.0%
!!! TTATGTTTTAGCTTGGAGCT+GGG + Chr7:74503305-74503324 MsG0780040216.01.T01:intron 35.0%
!!! TTGCTTTAGAGCCACTTTTA+GGG - Chr7:74505175-74505194 None:intergenic 35.0%
!!! TTTTAGGTTTGTCTTGTCCA+AGG + Chr7:74504676-74504695 MsG0780040216.01.T01:intron 35.0%
AATTGAGTCCCAGAAGTTTG+TGG - Chr7:74505939-74505958 None:intergenic 40.0%
ACTCACCACTGATCCATATA+TGG - Chr7:74503203-74503222 None:intergenic 40.0%
AGTGCATAACACCTTCCTAT+CGG + Chr7:74502554-74502573 MsG0780040216.01.T01:intron 40.0%
AGTTGACAATTCTTGCCTAG+CGG - Chr7:74503864-74503883 None:intergenic 40.0%
ATATGGATCAGTGGTGAGTT+TGG + Chr7:74503204-74503223 MsG0780040216.01.T01:intron 40.0%
ATCCAACTGCAAGACTAATG+AGG - Chr7:74502937-74502956 None:intergenic 40.0%
ATGTGGAATAGCCCTAAAAG+TGG + Chr7:74505161-74505180 MsG0780040216.01.T01:CDS 40.0%
CAAGGAAGCAGTAGATGAAA+TGG + Chr7:74504694-74504713 MsG0780040216.01.T01:intron 40.0%
CAATGTGGAACAACCCTAAA+AGG + Chr7:74505195-74505214 MsG0780040216.01.T01:CDS 40.0%
CACCTCCTAAAGGAAAAATG+TGG + Chr7:74505144-74505163 MsG0780040216.01.T01:CDS 40.0%
CATTTCATCTACTGCTTCCT+TGG - Chr7:74504696-74504715 None:intergenic 40.0%
CCCTAGGAAAAAGGAATTAG+CGG - Chr7:74501842-74501861 None:intergenic 40.0%
CTGCACGAATTGTTGTAGAA+CGG - Chr7:74502898-74502917 None:intergenic 40.0%
CTTGCTACTAAGGGATGAAT+TGG + Chr7:74504735-74504754 MsG0780040216.01.T01:intron 40.0%
GATTGTTCAGGCTTACAGTT+TGG - Chr7:74506380-74506399 None:intergenic 40.0%
GCACACATTTGGCTAATTGA+TGG - Chr7:74502248-74502267 None:intergenic 40.0%
GCAGGAATAATACTCTTGGA+TGG + Chr7:74502646-74502665 MsG0780040216.01.T01:intron 40.0%
GCTGGTTGATCTTCATTTGT+CGG + Chr7:74502068-74502087 MsG0780040216.01.T01:intron 40.0%
GCTTACAGTTTGGAAAATCC+AGG - Chr7:74506370-74506389 None:intergenic 40.0%
GGTATCTCAAGATTGAAGCT+CGG + Chr7:74502438-74502457 MsG0780040216.01.T01:CDS 40.0%
GGTTGCTCAGTTTGTGAAAT+GGG + Chr7:74504070-74504089 MsG0780040216.01.T01:CDS 40.0%
GTCAACTGTCTTCCATCATA+TGG + Chr7:74503877-74503896 MsG0780040216.01.T01:intron 40.0%
GTGAGAAACGAAGATACGAA+AGG - Chr7:74501942-74501961 None:intergenic 40.0%
GTGTTGTATCACCATCTTCT+GGG + Chr7:74505907-74505926 MsG0780040216.01.T01:CDS 40.0%
GTTGCTCTTTCTGTACTACT+GGG + Chr7:74503963-74503982 MsG0780040216.01.T01:CDS 40.0%
GTTTCTGATTTCTTGACCTC+TGG + Chr7:74505685-74505704 MsG0780040216.01.T01:intron 40.0%
GTTTCTTCCGTGTCAGAAAA+TGG + Chr7:74502812-74502831 MsG0780040216.01.T01:intron 40.0%
TATTCACTAGAATGGGTGAG+AGG + Chr7:74505089-74505108 MsG0780040216.01.T01:CDS 40.0%
TGGATTGATATTGCTGCTGT+TGG + Chr7:74502952-74502971 MsG0780040216.01.T01:CDS 40.0%
TGTACTACTGGGTATCATCT+TGG + Chr7:74503974-74503993 MsG0780040216.01.T01:CDS 40.0%
TGTGAACTTCTTTCTGTTGC+CGG - Chr7:74505994-74506013 None:intergenic 40.0%
TTGTTACCTTTGAGCGTGAT+AGG - Chr7:74501764-74501783 None:intergenic 40.0%
! ACCGCTAATTCCTTTTTCCT+AGG + Chr7:74501838-74501857 MsG0780040216.01.T01:intron 40.0%
! ATCTAGGTTCCCAATCCTTT+TGG + Chr7:74503535-74503554 MsG0780040216.01.T01:intron 40.0%
! CAAAGCAAGCTTTAGCTGAA+TGG + Chr7:74506048-74506067 MsG0780040216.01.T01:CDS 40.0%
! CCGCTAATTCCTTTTTCCTA+GGG + Chr7:74501839-74501858 MsG0780040216.01.T01:intron 40.0%
! TTCAGCTAAAGCTTGCTTTG+TGG - Chr7:74506048-74506067 None:intergenic 40.0%
! TTGATCTTCATTTGTCGGCT+GGG + Chr7:74502073-74502092 MsG0780040216.01.T01:intron 40.0%
! TTTGATGGGTCACGACAAAA+GGG - Chr7:74504968-74504987 None:intergenic 40.0%
!! AACTTCTGGGACTCAATTAG+GGG + Chr7:74505941-74505960 MsG0780040216.01.T01:CDS 40.0%
!! CAAACTTCTGGGACTCAATT+AGG + Chr7:74505939-74505958 MsG0780040216.01.T01:CDS 40.0%
!! CAGGAAGTGGAAATGGATTT+TGG + Chr7:74506183-74506202 MsG0780040216.01.T01:CDS 40.0%
!! CGAAAGGTATAGCTTTTTGC+TGG - Chr7:74501926-74501945 None:intergenic 40.0%
!! GTGCTAACAACTTGCTACTA+AGG + Chr7:74504725-74504744 MsG0780040216.01.T01:intron 40.0%
!!! GTTATGTTTTAGCTTGGAGC+TGG + Chr7:74503304-74503323 MsG0780040216.01.T01:intron 40.0%
!!! GTTGCTTTAGAGCCACTTTT+AGG - Chr7:74505176-74505195 None:intergenic 40.0%
AAATATGGCCAGCAAGCATC+AGG - Chr7:74503835-74503854 None:intergenic 45.0%
AAATGGGCAATGCGCGTTAT+TGG + Chr7:74504086-74504105 MsG0780040216.01.T01:CDS 45.0%
AACAGCTCCACAAAAGACCA+AGG - Chr7:74504542-74504561 None:intergenic 45.0%
AAGCGCCATCAGCAAATTCA+AGG + Chr7:74501652-74501671 MsG0780040216.01.T01:CDS 45.0%
AATATGGCCAGCAAGCATCA+GGG - Chr7:74503834-74503853 None:intergenic 45.0%
ACAACCCTAAAAGGACGTCA+TGG + Chr7:74505204-74505223 MsG0780040216.01.T01:CDS 45.0%
ACGATCCAGTCAGTGAATTC+TGG - Chr7:74506083-74506102 None:intergenic 45.0%
AGCGCCATCAGCAAATTCAA+GGG + Chr7:74501653-74501672 MsG0780040216.01.T01:CDS 45.0%
AGTGCAACTGTAACTGAACC+CGG - Chr7:74502780-74502799 None:intergenic 45.0%
AGTGTGAAAAGGATGACTGG+AGG + Chr7:74502673-74502692 MsG0780040216.01.T01:CDS 45.0%
ATCAGACTGCCCCAAAAGTA+AGG - Chr7:74502370-74502389 None:intergenic 45.0%
CATCTCCAGAATTCACTGAC+TGG + Chr7:74506075-74506094 MsG0780040216.01.T01:CDS 45.0%
CGAGACAATGGAGAGTGAAT+CGG + Chr7:74506148-74506167 MsG0780040216.01.T01:CDS 45.0%
CTCTCAGGAATTGCAACAGA+TGG - Chr7:74502498-74502517 None:intergenic 45.0%
CTTAGCAAGTCACCTCCTAA+AGG + Chr7:74505134-74505153 MsG0780040216.01.T01:CDS 45.0%
CTTTAGGCTACTGGATTGTC+AGG + Chr7:74504006-74504025 MsG0780040216.01.T01:CDS 45.0%
GAAGGAGATACACCCAAAGT+TGG - Chr7:74502348-74502367 None:intergenic 45.0%
GAGCAACCTGCAAATCATAG+AGG - Chr7:74503950-74503969 None:intergenic 45.0%
GAGTGAAGAGATGCACAATC+CGG + Chr7:74503387-74503406 MsG0780040216.01.T01:CDS 45.0%
GGAACCCAACTGCTAACAAT+TGG - Chr7:74502980-74502999 None:intergenic 45.0%
GGCTCCAATTGTTAGCAGTT+GGG + Chr7:74502973-74502992 MsG0780040216.01.T01:CDS 45.0%
GGGTTGCTCAGTTTGTGAAA+TGG + Chr7:74504069-74504088 MsG0780040216.01.T01:CDS 45.0%
GGTTGCTCTTTCTGTACTAC+TGG + Chr7:74503962-74503981 MsG0780040216.01.T01:intron 45.0%
GTCAGTGTGAAAAGGATGAC+TGG + Chr7:74502670-74502689 MsG0780040216.01.T01:CDS 45.0%
GTGTGAAAAGGATGACTGGA+GGG + Chr7:74502674-74502693 MsG0780040216.01.T01:CDS 45.0%
GTTGATCTTCATTTGTCGGC+TGG + Chr7:74502072-74502091 MsG0780040216.01.T01:intron 45.0%
TCAGCAGAGAATAGCTGCTA+AGG + Chr7:74503736-74503755 MsG0780040216.01.T01:intron 45.0%
TCTTCTCCTATCACGCTCAA+AGG + Chr7:74501755-74501774 MsG0780040216.01.T01:CDS 45.0%
TGGAAAGACATACCTCTCAC+AGG - Chr7:74505239-74505258 None:intergenic 45.0%
TGGCTCCAATTGTTAGCAGT+TGG + Chr7:74502972-74502991 MsG0780040216.01.T01:CDS 45.0%
TGTGAAAAGGATGACTGGAG+GGG + Chr7:74502675-74502694 MsG0780040216.01.T01:CDS 45.0%
TTCATACCCTGCATCACAGT+CGG - Chr7:74503142-74503161 None:intergenic 45.0%
TTTCACAAACTGAGCAACCC+CGG - Chr7:74504069-74504088 None:intergenic 45.0%
TTTCTTCCGACTGTGATGCA+GGG + Chr7:74503133-74503152 MsG0780040216.01.T01:intron 45.0%
! AGGTTCCCAATCCTTTTGGT+TGG + Chr7:74503539-74503558 MsG0780040216.01.T01:intron 45.0%
! ATTCTGAAAGTGGCGTAGCT+TGG + Chr7:74504373-74504392 MsG0780040216.01.T01:intron 45.0%
! CAGACCATGACGTCCTTTTA+GGG - Chr7:74505211-74505230 None:intergenic 45.0%
! CTTTGATGGGTCACGACAAA+AGG - Chr7:74504969-74504988 None:intergenic 45.0%
! GGTGTTGTATCACCATCTTC+TGG + Chr7:74505906-74505925 MsG0780040216.01.T01:intron 45.0%
! GGTTTTCGCCACAAACTTCT+GGG + Chr7:74505928-74505947 MsG0780040216.01.T01:CDS 45.0%
! TCAGACCATGACGTCCTTTT+AGG - Chr7:74505212-74505231 None:intergenic 45.0%
! TGGATGGTGTCAGTGTGAAA+AGG + Chr7:74502662-74502681 MsG0780040216.01.T01:CDS 45.0%
!! CTTTAGGAGGTGACTTGCTA+AGG - Chr7:74505136-74505155 None:intergenic 45.0%
!! GCAACCCTTGAATTTGCTGA+TGG - Chr7:74501660-74501679 None:intergenic 45.0%
!! GCAGTTTTATCCGATCTGCA+TGG - Chr7:74506109-74506128 None:intergenic 45.0%
!! GTGGCTCTAAAGCAACAATG+TGG + Chr7:74505180-74505199 MsG0780040216.01.T01:CDS 45.0%
AACACCTTCCTATCGGCATC+TGG + Chr7:74502561-74502580 MsG0780040216.01.T01:intron 50.0%
AAGATGGCAGTGTAGATGCC+GGG + Chr7:74504048-74504067 MsG0780040216.01.T01:CDS 50.0%
ACACCTTCCTATCGGCATCT+GGG + Chr7:74502562-74502581 MsG0780040216.01.T01:intron 50.0%
ACAGAGGCAGGAAGTGGAAA+TGG + Chr7:74506176-74506195 MsG0780040216.01.T01:CDS 50.0%
AGCAGCTATTCTCTGCTGAC+TGG - Chr7:74503735-74503754 None:intergenic 50.0%
AGTGCTTGCGTTACAACTGC+AGG + Chr7:74502306-74502325 MsG0780040216.01.T01:CDS 50.0%
ATTTCCACTTCCTGCCTCTG+TGG - Chr7:74506177-74506196 None:intergenic 50.0%
CTACTGGGTATCATCTTGGC+TGG + Chr7:74503978-74503997 MsG0780040216.01.T01:CDS 50.0%
GAAGATGGCAGTGTAGATGC+CGG + Chr7:74504047-74504066 MsG0780040216.01.T01:CDS 50.0%
GACTGCCCCAAAAGTAAGGA+AGG - Chr7:74502366-74502385 None:intergenic 50.0%
GAGTGAATCGGATTCCACAG+AGG + Chr7:74506160-74506179 MsG0780040216.01.T01:CDS 50.0%
GATTTCTTGACCTCTGGGTC+TGG + Chr7:74505691-74505710 MsG0780040216.01.T01:intron 50.0%
GCAGAGAATAGCTGCTAAGG+TGG + Chr7:74503739-74503758 MsG0780040216.01.T01:intron 50.0%
GCATCACAGTCGGAAGAAAC+TGG - Chr7:74503132-74503151 None:intergenic 50.0%
GCCATATTTGCTTGTCCGCT+AGG + Chr7:74503846-74503865 MsG0780040216.01.T01:intron 50.0%
GGATCGTTGACCATGCAGAT+CGG + Chr7:74506096-74506115 MsG0780040216.01.T01:CDS 50.0%
GGGGTGTACAGAAAGGGATT+TGG + Chr7:74502694-74502713 MsG0780040216.01.T01:CDS 50.0%
GTTGGCGAGTGAAGAAGTGA+AGG - Chr7:74501726-74501745 None:intergenic 50.0%
GTTTCTTCCGACTGTGATGC+AGG + Chr7:74503132-74503151 MsG0780040216.01.T01:intron 50.0%
TACTCTTGCAGTTGGAGCCT+TGG + Chr7:74504522-74504541 MsG0780040216.01.T01:CDS 50.0%
TCTTTCTGTTGCCGGTCTTG+TGG - Chr7:74505986-74506005 None:intergenic 50.0%
TGTGGCGAAAACCCAGAAGA+TGG - Chr7:74505921-74505940 None:intergenic 50.0%
TTGGGGCAGTCTGATACTCA+AGG + Chr7:74502375-74502394 MsG0780040216.01.T01:CDS 50.0%
! ACTGGAGGGGTGTACAGAAA+GGG + Chr7:74502688-74502707 MsG0780040216.01.T01:CDS 50.0%
! ATCTTGGCTGGAGCTGCTTT+AGG + Chr7:74503990-74504009 MsG0780040216.01.T01:CDS 50.0%
! GCCTAGCGGACAAGCAAATA+TGG - Chr7:74503850-74503869 None:intergenic 50.0%
! GGGTTTTCGCCACAAACTTC+TGG + Chr7:74505927-74505946 MsG0780040216.01.T01:CDS 50.0%
! TGTGAGCGCGTTCAAGTTTC+TGG + Chr7:74502417-74502436 MsG0780040216.01.T01:CDS 50.0%
!! CGCCTCATTAGTCTTGCAGT+TGG + Chr7:74502932-74502951 MsG0780040216.01.T01:CDS 50.0%
!! GTTGGAGCCTTGGTCTTTTG+TGG + Chr7:74504532-74504551 MsG0780040216.01.T01:CDS 50.0%
ACATGTGCCCTGATGCTTGC+TGG + Chr7:74503824-74503843 MsG0780040216.01.T01:intron 55.0%
ACTGCTTCCGAGCGAGAGTT+CGG + Chr7:74506124-74506143 MsG0780040216.01.T01:CDS 55.0%
AGATGGCAGTGTAGATGCCG+GGG + Chr7:74504049-74504068 MsG0780040216.01.T01:CDS 55.0%
CGAGAGTTCGGACGAGACAA+TGG + Chr7:74506136-74506155 MsG0780040216.01.T01:CDS 55.0%
GAATCGGATTCCACAGAGGC+AGG + Chr7:74506164-74506183 MsG0780040216.01.T01:CDS 55.0%
GATTCCACAGAGGCAGGAAG+TGG + Chr7:74506170-74506189 MsG0780040216.01.T01:CDS 55.0%
GTATGCTCCCAGATGCCGAT+AGG - Chr7:74502572-74502591 None:intergenic 55.0%
TAAGGAATTCCGCCCGACCA+CGG - Chr7:74505118-74505137 None:intergenic 55.0%
TGGTCTGACTCTCCTGTGAG+AGG + Chr7:74505224-74505243 MsG0780040216.01.T01:CDS 55.0%
! CTGGAGCTGCTTTAGGCTAC+TGG + Chr7:74503997-74504016 MsG0780040216.01.T01:CDS 55.0%
! GACTGGAGGGGTGTACAGAA+AGG + Chr7:74502687-74502706 MsG0780040216.01.T01:CDS 55.0%
AAGGAATTCCGCCCGACCAC+GGG - Chr7:74505117-74505136 None:intergenic 60.0%
GAATGGGTGAGAGGAACCCG+TGG + Chr7:74505098-74505117 MsG0780040216.01.T01:CDS 60.0%
GCTCCCAGATGCCGATAGGA+AGG - Chr7:74502568-74502587 None:intergenic 60.0%
GTCTCGTCCGAACTCTCGCT+CGG - Chr7:74506134-74506153 None:intergenic 60.0%
TCACCACAAGCCAGACCCAG+AGG - Chr7:74505704-74505723 None:intergenic 60.0%
! TGACCTCTGGGTCTGGCTTG+TGG + Chr7:74505698-74505717 MsG0780040216.01.T01:intron 60.0%
GGGTGAGAGGAACCCGTGGT+CGG + Chr7:74505102-74505121 MsG0780040216.01.T01:CDS 65.0%
GGTGAGAGGAACCCGTGGTC+GGG + Chr7:74505103-74505122 MsG0780040216.01.T01:CDS 65.0%
GAGAGGAACCCGTGGTCGGG+CGG + Chr7:74505106-74505125 MsG0780040216.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 74501644 74506437 74501644 ID=MsG0780040216.01;Name=MsG0780040216.01
Chr7 mRNA 74501644 74506437 74501644 ID=MsG0780040216.01.T01;Parent=MsG0780040216.01;Name=MsG0780040216.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0.87|0.77|1|0.87|0.77|9|217|537
Chr7 exon 74501644 74501812 74501644 ID=MsG0780040216.01.T01:exon:13380;Parent=MsG0780040216.01.T01
Chr7 exon 74502256 74502550 74502256 ID=MsG0780040216.01.T01:exon:13381;Parent=MsG0780040216.01.T01
Chr7 exon 74502650 74502807 74502650 ID=MsG0780040216.01.T01:exon:13382;Parent=MsG0780040216.01.T01
Chr7 exon 74502918 74503063 74502918 ID=MsG0780040216.01.T01:exon:13383;Parent=MsG0780040216.01.T01
Chr7 exon 74503316 74503408 74503316 ID=MsG0780040216.01.T01:exon:13384;Parent=MsG0780040216.01.T01
Chr7 exon 74503963 74504127 74503963 ID=MsG0780040216.01.T01:exon:13385;Parent=MsG0780040216.01.T01
Chr7 exon 74504508 74504599 74504508 ID=MsG0780040216.01.T01:exon:13386;Parent=MsG0780040216.01.T01
Chr7 exon 74505064 74505245 74505064 ID=MsG0780040216.01.T01:exon:13387;Parent=MsG0780040216.01.T01
Chr7 exon 74505907 74506437 74505907 ID=MsG0780040216.01.T01:exon:13388;Parent=MsG0780040216.01.T01
Chr7 CDS 74501644 74501812 74501644 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74502256 74502550 74502256 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74502650 74502807 74502650 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74502918 74503063 74502918 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74503316 74503408 74503316 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74503963 74504127 74503963 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74504508 74504599 74504508 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74505064 74505245 74505064 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 CDS 74505907 74506220 74505907 ID=MsG0780040216.01.T01:cds;Parent=MsG0780040216.01.T01
Chr7 three_prime_UTR 74506221 74506437 74506221 ID=MsG0780040216.01.T01:three_prime_utr;Parent=MsG0780040216.01.T01
Gene Sequence

>MsG0780040216.01.T01

ATGGGAAGAAGCGCCATCAGCAAATTCAAGGGTTGCTTCTCTCTCAACCTCAACCTTGTTCTTTTTCTCTTCTTTCTCTCCTTCACTTCTTCACTCGCCAACAATGATCAATCTTCTCCTATCACGCTCAAAGGTAACAATTTTCTCCAATGCATTTCTTCTTTTCACTCCAAATGTGTGCAAGTTATGTTTCTTTCTTTTGCATTTGAAAATGATCTCAGTGCTTGCGTTACAACTGCAGGTGTTGATATTGAAAGTCCAACTTTGGGTGTATCTCCTTCCTTACTTTTGGGGCAGTCTGATACTCAAGGTGCTAAAAACATTATGCGATGTGAGCGCGTTCAAGTTTCTGGTATCTCAAGATTGAAGCTCGGAAGTTATGCTAATTCATTGCATGTTACTTTGGCTCCATCTGTTGCAATTCCTGAGAGATTGCATAACAAAATTAAGGTTTGTTTTCATAGGAATAATACTCTTGGATGGTGTCAGTGTGAAAAGGATGACTGGAGGGGTGTACAGAAAGGGATTTGGAGTGCAGTCATGTCACCTTATGAAACTAGATATGTTGATGTCAAGATCGATTGTGAAATACCGGGTTCAGTTACAGTTGCACTTAAAGAAGATTTTCAGCAATTGCGCCTCATTAGTCTTGCAGTTGGATTGATATTGCTGCTGTTGGCTCCAATTGTTAGCAGTTGGGTTCCATTTTATTATAGCAGTTCAATGGCTATAGGAATCTTTCTTGTCATTATAATCATTCTTTTTCAGCTTGGAGCTGGGTCAATCCTTTTGCACCAATTCTCTATGATCGTAAATTCAATTCTTCAGAGTCTTGGGATGAGTGAAGAGATGCACAATCCGGTTGCTCTTTCTGTACTACTGGGTATCATCTTGGCTGGAGCTGCTTTAGGCTACTGGATTGTCAGGAGATTTGTTATTTCAAAAGAAGATGGCAGTGTAGATGCCGGGGTTGCTCAGTTTGTGAAATGGGCAATGCGCGTTATTGGAACTACTTTTGTTTTGCAGAGCACTCTTGATAATACTCTTGCAGTTGGAGCCTTGGTCTTTTGTGGAGCTGTTTGCAAGCTTATTTCTTCAATACAATTGCTTCATGAATGGTATGAAACTTCAGAGAATGATGATTATTCACTAGAATGGGTGAGAGGAACCCGTGGTCGGGCGGAATTCCTTAGCAAGTCACCTCCTAAAGGAAAAATGTGGAATAGCCCTAAAAGTGGCTCTAAAGCAACAATGTGGAACAACCCTAAAAGGACGTCATGGTCTGACTCTCCTGTGAGAGGTGTTGTATCACCATCTTCTGGGTTTTCGCCACAAACTTCTGGGACTCAATTAGGGGAAAATTATTATTCAACATTCCACAAGACCGGCAACAGAAAGAAGTTCACAAAGGAAGAATGGGATGACTTCACGAGAGACTCCACAAAGCAAGCTTTAGCTGAATGGGCAGCATCTCCAGAATTCACTGACTGGATCGTTGACCATGCAGATCGGATAAAACTGCTTCCGAGCGAGAGTTCGGACGAGACAATGGAGAGTGAATCGGATTCCACAGAGGCAGGAAGTGGAAATGGATTTTGGCTTTTTAATTGGTAG

Protein sequence

>MsG0780040216.01.T01

MGRSAISKFKGCFSLNLNLVLFLFFLSFTSSLANNDQSSPITLKGNNFLQCISSFHSKCVQVMFLSFAFENDLSACVTTAGVDIESPTLGVSPSLLLGQSDTQGAKNIMRCERVQVSGISRLKLGSYANSLHVTLAPSVAIPERLHNKIKVCFHRNNTLGWCQCEKDDWRGVQKGIWSAVMSPYETRYVDVKIDCEIPGSVTVALKEDFQQLRLISLAVGLILLLLAPIVSSWVPFYYSSSMAIGIFLVIIIILFQLGAGSILLHQFSMIVNSILQSLGMSEEMHNPVALSVLLGIILAGAALGYWIVRRFVISKEDGSVDAGVAQFVKWAMRVIGTTFVLQSTLDNTLAVGALVFCGAVCKLISSIQLLHEWYETSENDDYSLEWVRGTRGRAEFLSKSPPKGKMWNSPKSGSKATMWNNPKRTSWSDSPVRGVVSPSSGFSPQTSGTQLGENYYSTFHKTGNRKKFTKEEWDDFTRDSTKQALAEWAASPEFTDWIVDHADRIKLLPSESSDETMESESDSTEAGSGNGFWLFNW*