Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046165.01.T01 | XP_003608787.1 | 55.556 | 180 | 56 | 8 | 3 | 168 | 272 | 441 | 1.86E-44 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046165.01.T01 | Q9LNA5 | 43.094 | 181 | 75 | 7 | 3 | 168 | 274 | 441 | 6.44E-29 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046165.01.T01 | G7JK72 | 55.556 | 180 | 56 | 8 | 3 | 168 | 272 | 441 | 8.91e-45 | 162 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0880046165.01 | 0.808835 | 2.548236e-50 | 1.472159e-47 |
| MsG0080048700.01 | MsG0880046165.01 | 0.832213 | 1.074808e-55 | 1.193273e-52 |
| MsG0080048701.01 | MsG0880046165.01 | 0.823296 | 1.495240e-53 | 1.282278e-50 |
| MsG0080048829.01 | MsG0880046165.01 | 0.803930 | 2.755128e-49 | 1.402258e-46 |
| MsG0080048842.01 | MsG0880046165.01 | -0.830640 | 2.620612e-55 | 2.777449e-52 |
| MsG0080049140.01 | MsG0880046165.01 | 0.803780 | 2.960564e-49 | 1.500881e-46 |
| MsG0180000024.01 | MsG0880046165.01 | 0.801831 | 7.480346e-49 | 3.608063e-46 |
| MsG0180000076.01 | MsG0880046165.01 | 0.800322 | 1.521553e-48 | 7.064204e-46 |
| MsG0180000300.01 | MsG0880046165.01 | 0.825555 | 4.397882e-54 | 4.021858e-51 |
| MsG0180000353.01 | MsG0880046165.01 | 0.825287 | 5.090113e-54 | 4.619735e-51 |
| MsG0180000360.01 | MsG0880046165.01 | 0.836048 | 1.175406e-56 | 1.463998e-53 |
| MsG0180000373.01 | MsG0880046165.01 | 0.815278 | 1.003564e-51 | 6.888753e-49 |
| MsG0180001117.01 | MsG0880046165.01 | 0.810689 | 1.017257e-50 | 6.173213e-48 |
| MsG0180001198.01 | MsG0880046165.01 | 0.804195 | 2.426974e-49 | 1.243539e-46 |
| MsG0180001272.01 | MsG0880046165.01 | 0.806347 | 8.595729e-50 | 4.654693e-47 |
| MsG0180001294.01 | MsG0880046165.01 | 0.820453 | 6.805836e-53 | 5.387593e-50 |
| MsG0180001565.01 | MsG0880046165.01 | 0.809991 | 1.439212e-50 | 8.574721e-48 |
| MsG0180002276.01 | MsG0880046165.01 | 0.826340 | 2.861824e-54 | 2.676502e-51 |
| MsG0880045916.01 | MsG0880046165.01 | 0.844525 | 7.161716e-59 | 1.159426e-55 |
| MsG0880046165.01 | MsG0880046762.01 | 0.802050 | 6.741593e-49 | 3.269944e-46 |
| MsG0880046165.01 | MsG0880046804.01 | -0.828006 | 1.142656e-54 | 1.121600e-51 |
| MsG0880046165.01 | MsG0880047226.01 | 0.845087 | 5.053483e-59 | 8.327608e-56 |
| MsG0880046165.01 | MsG0880047293.01 | 0.829323 | 5.490409e-55 | 5.601289e-52 |
| MsG0880046165.01 | MsG0880047431.01 | 0.811683 | 6.194545e-51 | 3.859067e-48 |
| MsG0880046165.01 | MsG0880047466.01 | 0.813531 | 2.441595e-51 | 1.598580e-48 |
| MsG0180003232.01 | MsG0880046165.01 | 0.810015 | 1.421791e-50 | 8.476532e-48 |
| MsG0180003281.01 | MsG0880046165.01 | 0.809505 | 1.830697e-50 | 1.076759e-47 |
| MsG0180004126.01 | MsG0880046165.01 | 0.832232 | 1.063226e-55 | 1.181083e-52 |
| MsG0180004320.01 | MsG0880046165.01 | 0.817038 | 4.056151e-52 | 2.921799e-49 |
| MsG0180004806.01 | MsG0880046165.01 | 0.816930 | 4.289721e-52 | 3.080881e-49 |
| MsG0180004989.01 | MsG0880046165.01 | 0.838576 | 2.650003e-57 | 3.564459e-54 |
| MsG0180005188.01 | MsG0880046165.01 | 0.801234 | 9.915070e-49 | 4.710843e-46 |
| MsG0180005388.01 | MsG0880046165.01 | -0.825814 | 3.816946e-54 | 3.516758e-51 |
| MsG0180005559.01 | MsG0880046165.01 | 0.819470 | 1.142223e-52 | 8.797946e-50 |
| MsG0180005835.01 | MsG0880046165.01 | 0.802348 | 5.855641e-49 | 2.861879e-46 |
| MsG0180005921.01 | MsG0880046165.01 | 0.801715 | 7.899068e-49 | 3.798739e-46 |
| MsG0180006023.01 | MsG0880046165.01 | 0.800992 | 1.110758e-48 | 5.245713e-46 |
| MsG0180006235.01 | MsG0880046165.01 | 0.839377 | 1.643193e-57 | 2.265098e-54 |
| MsG0180006260.01 | MsG0880046165.01 | 0.837336 | 5.518594e-57 | 7.145781e-54 |
| MsG0280006420.01 | MsG0880046165.01 | 0.839587 | 1.449458e-57 | 2.010773e-54 |
| MsG0780040216.01 | MsG0880046165.01 | 0.814312 | 1.642585e-51 | 1.098459e-48 |
| MsG0780040364.01 | MsG0880046165.01 | 0.819596 | 1.068742e-52 | 8.260682e-50 |
| MsG0780040482.01 | MsG0880046165.01 | 0.805248 | 1.463062e-49 | 7.702438e-47 |
| MsG0780040483.01 | MsG0880046165.01 | 0.803350 | 3.634961e-49 | 1.822448e-46 |
| MsG0780040488.01 | MsG0880046165.01 | 0.837280 | 5.704835e-57 | 7.374042e-54 |
| MsG0780040541.01 | MsG0880046165.01 | 0.819852 | 9.340725e-53 | 7.271622e-50 |
| MsG0780040543.01 | MsG0880046165.01 | 0.843172 | 1.649435e-58 | 2.558896e-55 |
| MsG0780040564.01 | MsG0880046165.01 | 0.865892 | 4.246142e-65 | 1.403901e-61 |
| MsG0780040880.01 | MsG0880046165.01 | 0.816007 | 6.902268e-52 | 4.833649e-49 |
| MsG0780040897.01 | MsG0880046165.01 | 0.808619 | 2.834032e-50 | 1.627979e-47 |
| MsG0780041363.01 | MsG0880046165.01 | 0.805656 | 1.201515e-49 | 6.392472e-47 |
| MsG0780041667.01 | MsG0880046165.01 | 0.801345 | 9.407613e-49 | 4.482251e-46 |
| MsG0880041860.01 | MsG0880046165.01 | 0.806533 | 7.853298e-50 | 4.272939e-47 |
| MsG0880042552.01 | MsG0880046165.01 | 0.807855 | 4.122825e-50 | 2.321304e-47 |
| MsG0880042583.01 | MsG0880046165.01 | 0.823386 | 1.424391e-53 | 1.224509e-50 |
| MsG0880042845.01 | MsG0880046165.01 | 0.808093 | 3.668968e-50 | 2.078875e-47 |
| MsG0880042927.01 | MsG0880046165.01 | 0.802465 | 5.539422e-49 | 2.715352e-46 |
| MsG0880042929.01 | MsG0880046165.01 | 0.815610 | 8.464461e-52 | 5.863935e-49 |
| MsG0880043297.01 | MsG0880046165.01 | 0.848997 | 4.289467e-60 | 8.016785e-57 |
| MsG0880043516.01 | MsG0880046165.01 | 0.823967 | 1.041294e-53 | 9.101257e-51 |
| MsG0880043547.01 | MsG0880046165.01 | 0.810868 | 9.307434e-51 | 5.675362e-48 |
| MsG0880043921.01 | MsG0880046165.01 | 0.811528 | 6.692759e-51 | 4.152873e-48 |
| MsG0280010795.01 | MsG0880046165.01 | 0.807025 | 6.182268e-50 | 3.406672e-47 |
| MsG0280010868.01 | MsG0880046165.01 | 0.869844 | 2.282600e-66 | 8.691758e-63 |
| MsG0280011105.01 | MsG0880046165.01 | 0.808440 | 3.094457e-50 | 1.769488e-47 |
| MsG0280011154.01 | MsG0880046165.01 | 0.801905 | 7.220893e-49 | 3.489522e-46 |
| MsG0280011171.01 | MsG0880046165.01 | 0.835870 | 1.304352e-56 | 1.615846e-53 |
| MsG0280011282.01 | MsG0880046165.01 | 0.809912 | 1.496658e-50 | 8.898177e-48 |
| MsG0380012146.01 | MsG0880046165.01 | 0.808845 | 2.534975e-50 | 1.464933e-47 |
| MsG0380014171.01 | MsG0880046165.01 | 0.831089 | 2.033745e-55 | 2.184244e-52 |
| MsG0380014754.01 | MsG0880046165.01 | 0.803320 | 3.688023e-49 | 1.847645e-46 |
| MsG0680030763.01 | MsG0880046165.01 | 0.801241 | 9.882477e-49 | 4.696214e-46 |
| MsG0680031616.01 | MsG0880046165.01 | 0.811704 | 6.127756e-51 | 3.819751e-48 |
| MsG0680032758.01 | MsG0880046165.01 | 0.802064 | 6.697520e-49 | 3.249666e-46 |
| MsG0680034392.01 | MsG0880046165.01 | 0.832536 | 8.940475e-56 | 1.002226e-52 |
| MsG0480018846.01 | MsG0880046165.01 | 0.837861 | 4.047496e-57 | 5.326920e-54 |
| MsG0480018885.01 | MsG0880046165.01 | 0.835907 | 1.276364e-56 | 1.582925e-53 |
| MsG0480018918.01 | MsG0880046165.01 | 0.801372 | 9.286598e-49 | 4.427684e-46 |
| MsG0480018990.01 | MsG0880046165.01 | 0.839685 | 1.367159e-57 | 1.902244e-54 |
| MsG0480019170.01 | MsG0880046165.01 | 0.803240 | 3.831361e-49 | 1.915532e-46 |
| MsG0480019635.01 | MsG0880046165.01 | 0.819518 | 1.113812e-52 | 8.590304e-50 |
| MsG0480020242.01 | MsG0880046165.01 | 0.802230 | 6.190306e-49 | 3.016301e-46 |
| MsG0480020263.01 | MsG0880046165.01 | 0.809537 | 1.801894e-50 | 1.060745e-47 |
| MsG0480021156.01 | MsG0880046165.01 | 0.831262 | 1.843922e-55 | 1.990410e-52 |
| MsG0480021705.01 | MsG0880046165.01 | 0.803363 | 3.612373e-49 | 1.811711e-46 |
| MsG0480022057.01 | MsG0880046165.01 | -0.829410 | 5.228154e-55 | 5.346824e-52 |
| MsG0480022167.01 | MsG0880046165.01 | 0.808652 | 2.787887e-50 | 1.602891e-47 |
| MsG0480022325.01 | MsG0880046165.01 | 0.842135 | 3.109804e-58 | 4.670449e-55 |
| MsG0480022717.01 | MsG0880046165.01 | 0.800840 | 1.193300e-48 | 5.613448e-46 |
| MsG0480022719.01 | MsG0880046165.01 | 0.818732 | 1.680901e-52 | 1.268453e-49 |
| MsG0480023013.01 | MsG0880046165.01 | 0.817794 | 2.740481e-52 | 2.015418e-49 |
| MsG0480023105.01 | MsG0880046165.01 | 0.818354 | 2.048021e-52 | 1.529573e-49 |
| MsG0480023196.01 | MsG0880046165.01 | 0.802940 | 4.419650e-49 | 2.192761e-46 |
| MsG0480023421.01 | MsG0880046165.01 | 0.838956 | 2.112511e-57 | 2.874425e-54 |
| MsG0480023450.01 | MsG0880046165.01 | 0.839108 | 1.930374e-57 | 2.638788e-54 |
| MsG0480023500.01 | MsG0880046165.01 | 0.812190 | 4.802795e-51 | 3.033439e-48 |
| MsG0480023620.01 | MsG0880046165.01 | 0.867939 | 9.450910e-66 | 3.358225e-62 |
| MsG0480023874.01 | MsG0880046165.01 | 0.807110 | 5.932765e-50 | 3.276223e-47 |
| MsG0580024035.01 | MsG0880046165.01 | 0.824632 | 7.266930e-54 | 6.473578e-51 |
| MsG0580024478.01 | MsG0880046165.01 | 0.810680 | 1.021732e-50 | 6.198880e-48 |
| MsG0580024489.01 | MsG0880046165.01 | 0.833041 | 6.695526e-56 | 7.620222e-53 |
| MsG0580025093.01 | MsG0880046165.01 | 0.808238 | 3.416853e-50 | 1.943488e-47 |
| MsG0580025352.01 | MsG0880046165.01 | 0.829282 | 5.615491e-55 | 5.722234e-52 |
| MsG0580025385.01 | MsG0880046165.01 | 0.813167 | 2.935732e-51 | 1.902910e-48 |
| MsG0380015389.01 | MsG0880046165.01 | 0.808198 | 3.484363e-50 | 1.979833e-47 |
| MsG0380015548.01 | MsG0880046165.01 | 0.845063 | 5.130935e-59 | 8.448626e-56 |
| MsG0380016994.01 | MsG0880046165.01 | 0.821189 | 4.607640e-53 | 3.722968e-50 |
| MsG0380017239.01 | MsG0880046165.01 | 0.822517 | 2.270237e-53 | 1.904630e-50 |
| MsG0380017240.01 | MsG0880046165.01 | 0.860710 | 1.707896e-63 | 4.712707e-60 |
| MsG0380017410.01 | MsG0880046165.01 | 0.820504 | 6.622638e-53 | 5.249649e-50 |
| MsG0380017643.01 | MsG0880046165.01 | 0.810054 | 1.394525e-50 | 8.321907e-48 |
| MsG0380017881.01 | MsG0880046165.01 | 0.818224 | 2.191455e-52 | 1.630679e-49 |
| MsG0380018007.01 | MsG0880046165.01 | 0.852922 | 3.357658e-61 | 7.128513e-58 |
| MsG0480018230.01 | MsG0880046165.01 | 0.810655 | 1.034672e-50 | 6.273172e-48 |
| MsG0480018256.01 | MsG0880046165.01 | 0.842239 | 2.920076e-58 | 4.399600e-55 |
| MsG0580027954.01 | MsG0880046165.01 | 0.811165 | 8.023131e-51 | 4.930633e-48 |
| MsG0580028449.01 | MsG0880046165.01 | 0.832625 | 8.494569e-56 | 9.547670e-53 |
| MsG0580029298.01 | MsG0880046165.01 | 0.802459 | 5.555202e-49 | 2.722667e-46 |
| MsG0580029712.01 | MsG0880046165.01 | 0.819253 | 1.279598e-52 | 9.796477e-50 |
| MsG0680030436.01 | MsG0880046165.01 | 0.851116 | 1.094063e-60 | 2.191400e-57 |
| MsG0280007089.01 | MsG0880046165.01 | 0.841508 | 4.553500e-58 | 6.705603e-55 |
| MsG0280007601.01 | MsG0880046165.01 | 0.814408 | 1.564480e-51 | 1.048961e-48 |
| MsG0280007609.01 | MsG0880046165.01 | 0.818528 | 1.869963e-52 | 1.403269e-49 |
| MsG0280007761.01 | MsG0880046165.01 | 0.883278 | 5.134791e-71 | 3.233873e-67 |
| MsG0280007790.01 | MsG0880046165.01 | 0.836485 | 9.104533e-57 | 1.148953e-53 |
| MsG0280007983.01 | MsG0880046165.01 | 0.844968 | 5.441305e-59 | 8.932855e-56 |
| MsG0280008280.01 | MsG0880046165.01 | 0.841616 | 4.264684e-58 | 6.301565e-55 |
| MsG0280009241.01 | MsG0880046165.01 | 0.849369 | 3.379568e-60 | 6.392967e-57 |
| MsG0280009509.01 | MsG0880046165.01 | 0.820214 | 7.718231e-53 | 6.069284e-50 |
| MsG0280009514.01 | MsG0880046165.01 | 0.807013 | 6.217981e-50 | 3.425243e-47 |
| MsG0280010001.01 | MsG0880046165.01 | 0.819666 | 1.030239e-52 | 7.978591e-50 |
| MsG0280010173.01 | MsG0880046165.01 | 0.859549 | 3.829737e-63 | 1.015302e-59 |
| MsG0280010263.01 | MsG0880046165.01 | 0.800072 | 1.711100e-48 | 7.893647e-46 |
| MsG0780036235.01 | MsG0880046165.01 | 0.809092 | 2.245016e-50 | 1.306000e-47 |
| MsG0780038837.01 | MsG0880046165.01 | 0.871529 | 6.374741e-67 | 2.579843e-63 |
| MsG0780038945.01 | MsG0880046165.01 | 0.850906 | 1.254133e-60 | 2.494571e-57 |
| MsG0780039462.01 | MsG0880046165.01 | -0.803328 | 3.673653e-49 | 1.840826e-46 |
| MsG0780039533.01 | MsG0880046165.01 | 0.802316 | 5.944626e-49 | 2.903145e-46 |
| MsG0780039817.01 | MsG0880046165.01 | 0.801605 | 8.321143e-49 | 3.990481e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046165.01.T01 | MTR_4g101950 | 55.556 | 180 | 56 | 8 | 3 | 168 | 272 | 441 | 2.26e-48 | 162 |
| MsG0880046165.01.T01 | MTR_5g011580 | 43.011 | 186 | 70 | 9 | 3 | 168 | 272 | 441 | 5.55e-31 | 116 |
| MsG0880046165.01.T01 | MTR_7g022470 | 42.581 | 155 | 73 | 5 | 25 | 168 | 302 | 451 | 7.65e-22 | 91.3 |
| MsG0880046165.01.T01 | MTR_5g047260 | 38.710 | 155 | 76 | 5 | 25 | 168 | 305 | 451 | 2.64e-19 | 84.3 |
| MsG0880046165.01.T01 | MTR_7g028050 | 46.602 | 103 | 44 | 2 | 25 | 116 | 191 | 293 | 2.70e-19 | 83.2 |
| MsG0880046165.01.T01 | MTR_7g028050 | 46.602 | 103 | 44 | 2 | 25 | 116 | 294 | 396 | 3.77e-19 | 83.6 |
| MsG0880046165.01.T01 | MTR_1g029520 | 42.453 | 106 | 50 | 3 | 22 | 116 | 538 | 643 | 1.67e-17 | 79.3 |
| MsG0880046165.01.T01 | MTR_3g088885 | 43.519 | 108 | 50 | 3 | 22 | 118 | 304 | 411 | 7.35e-17 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046165.01.T01 | AT1G12420 | 42.222 | 180 | 78 | 6 | 3 | 168 | 202 | 369 | 3.56e-30 | 113 |
| MsG0880046165.01.T01 | AT1G12420 | 43.094 | 181 | 75 | 7 | 3 | 168 | 274 | 441 | 6.57e-30 | 113 |
| MsG0880046165.01.T01 | AT4G22780 | 51.961 | 102 | 38 | 3 | 26 | 116 | 287 | 388 | 1.07e-23 | 96.7 |
| MsG0880046165.01.T01 | AT4G22780 | 51.961 | 102 | 38 | 3 | 26 | 116 | 287 | 388 | 1.07e-23 | 96.7 |
| MsG0880046165.01.T01 | AT2G03730 | 50.495 | 101 | 39 | 3 | 25 | 114 | 311 | 411 | 1.80e-21 | 90.5 |
| MsG0880046165.01.T01 | AT2G03730 | 50.495 | 101 | 39 | 3 | 25 | 114 | 311 | 411 | 1.80e-21 | 90.5 |
| MsG0880046165.01.T01 | AT3G01990 | 45.631 | 103 | 45 | 2 | 25 | 116 | 304 | 406 | 1.93e-20 | 87.4 |
| MsG0880046165.01.T01 | AT3G01990 | 45.631 | 103 | 45 | 2 | 25 | 116 | 304 | 406 | 1.93e-20 | 87.4 |
| MsG0880046165.01.T01 | AT3G01990 | 45.631 | 103 | 45 | 2 | 25 | 116 | 304 | 406 | 2.16e-20 | 87.4 |
| MsG0880046165.01.T01 | AT3G01990 | 45.631 | 103 | 45 | 2 | 25 | 116 | 290 | 392 | 2.18e-20 | 87.0 |
| MsG0880046165.01.T01 | AT3G01990 | 45.631 | 103 | 45 | 2 | 25 | 116 | 290 | 392 | 2.18e-20 | 87.0 |
| MsG0880046165.01.T01 | AT3G01990 | 45.631 | 103 | 45 | 2 | 25 | 116 | 290 | 392 | 2.26e-20 | 87.0 |
| MsG0880046165.01.T01 | AT1G69040 | 45.631 | 103 | 45 | 3 | 25 | 116 | 303 | 405 | 5.30e-20 | 86.3 |
| MsG0880046165.01.T01 | AT1G69040 | 45.631 | 103 | 45 | 3 | 25 | 116 | 299 | 401 | 6.12e-20 | 85.9 |
| MsG0880046165.01.T01 | AT1G76990 | 39.706 | 136 | 67 | 4 | 22 | 142 | 303 | 438 | 1.38e-19 | 85.1 |
| MsG0880046165.01.T01 | AT1G76990 | 39.706 | 136 | 67 | 4 | 22 | 142 | 303 | 438 | 1.38e-19 | 85.1 |
| MsG0880046165.01.T01 | AT1G76990 | 39.706 | 136 | 67 | 4 | 22 | 142 | 303 | 438 | 1.38e-19 | 85.1 |
| MsG0880046165.01.T01 | AT1G76990 | 39.706 | 136 | 67 | 4 | 22 | 142 | 303 | 438 | 1.38e-19 | 85.1 |
| MsG0880046165.01.T01 | AT1G76990 | 39.706 | 136 | 67 | 4 | 22 | 142 | 303 | 438 | 1.38e-19 | 85.1 |
| MsG0880046165.01.T01 | AT5G25320 | 41.748 | 103 | 49 | 2 | 25 | 116 | 299 | 401 | 3.22e-17 | 78.2 |
| MsG0880046165.01.T01 | AT5G25320 | 41.748 | 103 | 49 | 2 | 25 | 116 | 338 | 440 | 4.93e-17 | 77.8 |
| MsG0880046165.01.T01 | AT3G01990 | 72.222 | 36 | 10 | 0 | 25 | 60 | 304 | 339 | 2.15e-11 | 61.2 |
| MsG0880046165.01.T01 | AT3G01990 | 72.222 | 36 | 10 | 0 | 25 | 60 | 304 | 339 | 2.54e-11 | 61.2 |
| MsG0880046165.01.T01 | AT3G01990 | 72.222 | 36 | 10 | 0 | 25 | 60 | 290 | 325 | 2.69e-11 | 61.2 |
Find 72 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAGAATTCCATGCTTTC+TGG | 0.064383 | 8:-70027755 | None:intergenic |
| ACATATGCTTTCTTAATAAA+AGG | 0.180050 | 8:-70027806 | None:intergenic |
| GAGAAGGAATCTGTACAATT+TGG | 0.275616 | 8:+70029274 | MsG0880046165.01.T01:CDS |
| TGAGAAGGAATAGGAGAGTT+TGG | 0.278470 | 8:+70026854 | MsG0880046165.01.T01:five_prime_UTR |
| TACCTTGACTATAGTTGAAT+TGG | 0.284936 | 8:-70027630 | None:intergenic |
| TTTCATGTTACCGATCAAAA+TGG | 0.291087 | 8:+70027940 | MsG0880046165.01.T01:CDS |
| CGCTCCGGTTCTGAACTAAT+TGG | 0.301964 | 8:-70028782 | None:intergenic |
| CCAGAAAGCATGGAATTCTT+TGG | 0.305345 | 8:+70027755 | MsG0880046165.01.T01:five_prime_UTR |
| TGTCTCATAACCGTCGTTTC+AGG | 0.310934 | 8:+70027003 | MsG0880046165.01.T01:five_prime_UTR |
| GCTCCGGTTCTGAACTAATT+GGG | 0.318294 | 8:-70028781 | None:intergenic |
| TGAATCTTTCTATGTATAGA+AGG | 0.325840 | 8:-70026954 | None:intergenic |
| AATAGGAGAGTTTGGTAGGA+GGG | 0.393347 | 8:+70026862 | MsG0880046165.01.T01:five_prime_UTR |
| CAGAGAGAGTGAGAAGGAAT+AGG | 0.402611 | 8:+70026845 | MsG0880046165.01.T01:five_prime_UTR |
| ATCTGATGGAAGATGGTTCA+TGG | 0.410749 | 8:+70027832 | MsG0880046165.01.T01:exon |
| GGGGCAGTGTTATTGTCTCT+TGG | 0.420031 | 8:+70029242 | MsG0880046165.01.T01:CDS |
| GTTAAGCAATTTAAAAGTAA+AGG | 0.433580 | 8:+70029160 | MsG0880046165.01.T01:CDS |
| AAGGAATAGGAGAGTTTGGT+AGG | 0.449433 | 8:+70026858 | MsG0880046165.01.T01:five_prime_UTR |
| ATCAAGGCGAGGATTGCGTT+TGG | 0.457398 | 8:+70026798 | MsG0880046165.01.T01:five_prime_UTR |
| AAAGCATATGTTTCATCTGA+TGG | 0.461288 | 8:+70027818 | MsG0880046165.01.T01:five_prime_UTR |
| AAGAGAGTGGGGATAGAGAA+AGG | 0.466380 | 8:+70026821 | MsG0880046165.01.T01:five_prime_UTR |
| CATAACTACCACCGGAGACT+TGG | 0.467944 | 8:+70029057 | MsG0880046165.01.T01:CDS |
| TATAGTTGAATTGGAACAAA+CGG | 0.479069 | 8:-70027621 | None:intergenic |
| AACCCCAATTAGTTCAGAAC+CGG | 0.487755 | 8:+70028778 | MsG0880046165.01.T01:CDS |
| TAGGAGAGTTTGGTAGGAGG+GGG | 0.487853 | 8:+70026864 | MsG0880046165.01.T01:five_prime_UTR |
| GATCAATCAGTTGGAGTTGG+AGG | 0.489723 | 8:+70029221 | MsG0880046165.01.T01:CDS |
| TTCTATGCAACAGATGCCAT+TGG | 0.489734 | 8:+70029091 | MsG0880046165.01.T01:CDS |
| ATAGGAGAGTTTGGTAGGAG+GGG | 0.499816 | 8:+70026863 | MsG0880046165.01.T01:five_prime_UTR |
| AACATTTGCAGCCAAGTCTC+CGG | 0.500842 | 8:-70029068 | None:intergenic |
| TTGGTCAGCTGGGTATCCAA+TGG | 0.501529 | 8:-70029107 | None:intergenic |
| ATCAAGCTACTAAGATAAGA+TGG | 0.502245 | 8:+70027079 | MsG0880046165.01.T01:five_prime_UTR |
| ATGTTTCATCTGATGGAAGA+TGG | 0.504319 | 8:+70027825 | MsG0880046165.01.T01:five_prime_UTR |
| AAGAGGGAGAGTTAAGATCA+AGG | 0.511157 | 8:+70026782 | None:intergenic |
| GTTTATGACGATTTGATCGA+AGG | 0.514346 | 8:+70026886 | MsG0880046165.01.T01:five_prime_UTR |
| ATGCATTAAAAGCCACCGCT+TGG | 0.514841 | 8:+70026915 | MsG0880046165.01.T01:five_prime_UTR |
| TTCCAATTCAACTATAGTCA+AGG | 0.517688 | 8:+70027628 | MsG0880046165.01.T01:five_prime_UTR |
| TGAATCACACGATGGCGCTC+CGG | 0.519655 | 8:-70028797 | None:intergenic |
| GAAGATCAATCAGTTGGAGT+TGG | 0.523868 | 8:+70029218 | MsG0880046165.01.T01:CDS |
| AGCACAGCTTCCTGAAACGA+CGG | 0.523884 | 8:-70027013 | None:intergenic |
| TGTACAGATTCCTTCTCACT+AGG | 0.528667 | 8:-70029268 | None:intergenic |
| TTTGATAGTGCCAGAAAGCA+TGG | 0.529161 | 8:+70027745 | MsG0880046165.01.T01:five_prime_UTR |
| CTCCGGTTCTGAACTAATTG+GGG | 0.530984 | 8:-70028780 | None:intergenic |
| GAATAGGAGAGTTTGGTAGG+AGG | 0.532344 | 8:+70026861 | MsG0880046165.01.T01:five_prime_UTR |
| AAAGGACAGAGAGAGTGAGA+AGG | 0.542628 | 8:+70026839 | MsG0880046165.01.T01:five_prime_UTR |
| GTCTCCGGTGGTAGTTATGT+CGG | 0.542647 | 8:-70029053 | None:intergenic |
| GAGAGGGAAGATCAATCAGT+TGG | 0.543799 | 8:+70029212 | MsG0880046165.01.T01:CDS |
| GTTACATTCAACCCTTCTCT+CGG | 0.543923 | 8:-70029025 | None:intergenic |
| GATGGAATGGTCTTCATGTA+CGG | 0.550387 | 8:+70027097 | MsG0880046165.01.T01:five_prime_UTR |
| ATCAATCAGTTGGAGTTGGA+GGG | 0.550430 | 8:+70029222 | MsG0880046165.01.T01:CDS |
| ATGAGAACATTCCGAGAGAA+GGG | 0.564720 | 8:+70029014 | MsG0880046165.01.T01:CDS |
| GATTGCGTTTGGAAGAGAGT+GGG | 0.565015 | 8:+70026809 | MsG0880046165.01.T01:five_prime_UTR |
| GCTACTAAGATAAGATGGAA+TGG | 0.566013 | 8:+70027084 | MsG0880046165.01.T01:five_prime_UTR |
| GATGAGAACATTCCGAGAGA+AGG | 0.566479 | 8:+70029013 | MsG0880046165.01.T01:CDS |
| ATTGCGTTTGGAAGAGAGTG+GGG | 0.579382 | 8:+70026810 | MsG0880046165.01.T01:five_prime_UTR |
| AAGTCATCAAAAGGTAGAGA+GGG | 0.580764 | 8:+70029196 | MsG0880046165.01.T01:CDS |
| CAAGTCATCAAAAGGTAGAG+AGG | 0.580801 | 8:+70029195 | MsG0880046165.01.T01:CDS |
| GGATTGCGTTTGGAAGAGAG+TGG | 0.587606 | 8:+70026808 | MsG0880046165.01.T01:five_prime_UTR |
| TCAATCAGTTGGAGTTGGAG+GGG | 0.591152 | 8:+70029223 | MsG0880046165.01.T01:CDS |
| CTCTTGGAAGCCTAGTGAGA+AGG | 0.591708 | 8:+70029258 | MsG0880046165.01.T01:CDS |
| TAATAATCTTCAATAATCCT+CGG | 0.593923 | 8:-70027057 | None:intergenic |
| TTACTAGAAATTCCAAGCGG+TGG | 0.604680 | 8:-70026927 | None:intergenic |
| GAATCTTTCTATGTATAGAA+GGG | 0.611652 | 8:-70026953 | None:intergenic |
| CGTGCCGACATAACTACCAC+CGG | 0.642054 | 8:+70029049 | MsG0880046165.01.T01:CDS |
| CAGACAAGGGCTTCTCGCCG+AGG | 0.655196 | 8:+70028989 | MsG0880046165.01.T01:intron |
| GCAAGCATTGAATCACACGA+TGG | 0.664874 | 8:-70028805 | None:intergenic |
| GATGGAAGATGGTTCATGGA+TGG | 0.664920 | 8:+70027836 | MsG0880046165.01.T01:exon |
| TCGGAATGTTCTCATCACCT+CGG | 0.665865 | 8:-70029006 | None:intergenic |
| GGAGAGTTAAGATCAAGGCG+AGG | 0.672892 | 8:+70026787 | MsG0880046165.01.T01:five_prime_UTR |
| TAATCTTCAATAATCCTCGG+TGG | 0.688570 | 8:-70027054 | None:intergenic |
| ATTTGCAGCCAAGTCTCCGG+TGG | 0.688653 | 8:-70029065 | None:intergenic |
| AGTAGAGAGAAGATCATGCG+AGG | 0.712972 | 8:+70028835 | MsG0880046165.01.T01:CDS |
| TTACTACTTTAAAACCACCG+AGG | 0.761305 | 8:+70027040 | MsG0880046165.01.T01:five_prime_UTR |
| AAGTTACTAGAAATTCCAAG+CGG | 0.792461 | 8:-70026930 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTAAAAATAATTTTGT+CGG | - | Chr8:70027543-70027562 | None:intergenic | 10.0% |
| !!! | GTAAAAATTATTTTTATTTC+AGG | + | Chr8:70028730-70028749 | MsG0880046165.01.T01:intron | 10.0% |
| !!! | TAATTTTTACATCATTAATT+AGG | - | Chr8:70028720-70028739 | None:intergenic | 10.0% |
| !! | AAACAAAGAATTTAGATTTA+TGG | - | Chr8:70028058-70028077 | None:intergenic | 15.0% |
| !! | AAATCAATTATAGAAAAAGT+TGG | - | Chr8:70027517-70027536 | None:intergenic | 15.0% |
| !! | AACATTAAACACAAAAAATT+AGG | - | Chr8:70027915-70027934 | None:intergenic | 15.0% |
| !! | ACATTAAACACAAAAAATTA+GGG | - | Chr8:70027914-70027933 | None:intergenic | 15.0% |
| !! | AGAAAATTCCTTAATTAATT+TGG | + | Chr8:70027662-70027681 | MsG0880046165.01.T01:intron | 15.0% |
| !! | ATCTTAATATATTCATATCA+CGG | - | Chr8:70028913-70028932 | None:intergenic | 15.0% |
| !! | GAAAATTCCTTAATTAATTT+GGG | + | Chr8:70027663-70027682 | MsG0880046165.01.T01:intron | 15.0% |
| !!! | AATGCAATGTTTTTTTTTTT+TGG | + | Chr8:70028676-70028695 | MsG0880046165.01.T01:intron | 15.0% |
| !!! | ATTTGCATTTAACTTTTTTA+TGG | + | Chr8:70027231-70027250 | MsG0880046165.01.T01:intron | 15.0% |
| !! | AAACCAGATATTAATTTCAA+GGG | + | Chr8:70027326-70027345 | MsG0880046165.01.T01:intron | 20.0% |
| !! | ACATATGCTTTCTTAATAAA+AGG | - | Chr8:70027809-70027828 | None:intergenic | 20.0% |
| !! | ATTCAGAAAAATTTGATTGA+AGG | - | Chr8:70027278-70027297 | None:intergenic | 20.0% |
| !! | CTTAATTGATATTAAACCAT+TGG | - | Chr8:70028012-70028031 | None:intergenic | 20.0% |
| !! | GTTAAGCAATTTAAAAGTAA+AGG | + | Chr8:70029160-70029179 | MsG0880046165.01.T01:CDS | 20.0% |
| !! | TAATAATCTTCAATAATCCT+CGG | - | Chr8:70027060-70027079 | None:intergenic | 20.0% |
| !! | TAATCAAATCTTGTTCTTAA+GGG | + | Chr8:70029299-70029318 | MsG0880046165.01.T01:CDS | 20.0% |
| !! | TTAATCAAATCTTGTTCTTA+AGG | + | Chr8:70029298-70029317 | MsG0880046165.01.T01:CDS | 20.0% |
| !!! | AATTTTTCAATCTTGTTCAT+TGG | + | Chr8:70027865-70027884 | MsG0880046165.01.T01:intron | 20.0% |
| !!! | CGTTTTAAAATATATTGAAC+AGG | + | Chr8:70027984-70028003 | MsG0880046165.01.T01:CDS | 20.0% |
| ! | AAACCCTTGAAATTAATATC+TGG | - | Chr8:70027332-70027351 | None:intergenic | 25.0% |
| ! | AAGTTAAATGCAAATGAATC+AGG | - | Chr8:70027226-70027245 | None:intergenic | 25.0% |
| ! | ATTGTTAATTTCTTGAATGC+AGG | + | Chr8:70028939-70028958 | MsG0880046165.01.T01:intron | 25.0% |
| ! | GAAACCAGATATTAATTTCA+AGG | + | Chr8:70027325-70027344 | MsG0880046165.01.T01:intron | 25.0% |
| ! | GAATCTTTCTATGTATAGAA+GGG | - | Chr8:70026956-70026975 | None:intergenic | 25.0% |
| ! | GCTGTCTTTAACATAAATTA+AGG | - | Chr8:70028265-70028284 | None:intergenic | 25.0% |
| ! | GTCTTTAACATAAATTAAGG+AGG | - | Chr8:70028262-70028281 | None:intergenic | 25.0% |
| ! | GTGTAAACCCAAATTAATTA+AGG | - | Chr8:70027673-70027692 | None:intergenic | 25.0% |
| ! | TAAACATTGAAAAGAGAAGA+AGG | - | Chr8:70027173-70027192 | None:intergenic | 25.0% |
| ! | TATAGTTGAATTGGAACAAA+CGG | - | Chr8:70027624-70027643 | None:intergenic | 25.0% |
| ! | TCAATTATAGAAAAAGTTGG+TGG | - | Chr8:70027514-70027533 | None:intergenic | 25.0% |
| ! | TCAGAACTAAACTTGAAAAT+TGG | - | Chr8:70028466-70028485 | None:intergenic | 25.0% |
| ! | TGAATCTTTCTATGTATAGA+AGG | - | Chr8:70026957-70026976 | None:intergenic | 25.0% |
| ! | TGGAAAACAAATCATAGAAA+TGG | + | Chr8:70028110-70028129 | MsG0880046165.01.T01:intron | 25.0% |
| ! | TTTCGTGTTTGAAAAAAACA+GGG | + | Chr8:70027583-70027602 | MsG0880046165.01.T01:intron | 25.0% |
| !! | AATATCTGGTTTCAAAACTA+AGG | - | Chr8:70027318-70027337 | None:intergenic | 25.0% |
| !! | ATATCTGGTTTCAAAACTAA+GGG | - | Chr8:70027317-70027336 | None:intergenic | 25.0% |
| !! | TTTTACATTAGACATAAGGA+TGG | + | Chr8:70028755-70028774 | MsG0880046165.01.T01:CDS | 25.0% |
| !! | TTTTCGTGTTTGAAAAAAAC+AGG | + | Chr8:70027582-70027601 | MsG0880046165.01.T01:intron | 25.0% |
| !!! | CGTTTAAGATAGTTTTTACA+AGG | + | Chr8:70028335-70028354 | MsG0880046165.01.T01:intron | 25.0% |
| !!! | TAACTTGTTTCCATTTTGAT+CGG | - | Chr8:70027953-70027972 | None:intergenic | 25.0% |
| AAAGCATATGTTTCATCTGA+TGG | + | Chr8:70027818-70027837 | MsG0880046165.01.T01:five_prime_UTR | 30.0% | |
| AAGCAAAAAGAGGTTTGAAT+CGG | - | Chr8:70027399-70027418 | None:intergenic | 30.0% | |
| AAGTTACTAGAAATTCCAAG+CGG | - | Chr8:70026933-70026952 | None:intergenic | 30.0% | |
| ATATATTGAACAGGTACCAA+TGG | + | Chr8:70027993-70028012 | MsG0880046165.01.T01:intron | 30.0% | |
| ATCAAGCTACTAAGATAAGA+TGG | + | Chr8:70027079-70027098 | MsG0880046165.01.T01:five_prime_UTR | 30.0% | |
| ATTGGATCATCTGATAATCA+CGG | - | Chr8:70028448-70028467 | None:intergenic | 30.0% | |
| GAGGATTCTCAGAAATTAAT+CGG | + | Chr8:70028303-70028322 | MsG0880046165.01.T01:intron | 30.0% | |
| TACAAGGAGATAGTGATATT+AGG | + | Chr8:70028351-70028370 | MsG0880046165.01.T01:intron | 30.0% | |
| TACCTTGACTATAGTTGAAT+TGG | - | Chr8:70027633-70027652 | None:intergenic | 30.0% | |
| TCACTTAGTAGCATTTACAA+TGG | + | Chr8:70028090-70028109 | MsG0880046165.01.T01:intron | 30.0% | |
| TGATTGAAGGATGAAGAAAA+TGG | - | Chr8:70027265-70027284 | None:intergenic | 30.0% | |
| TTCCAATTCAACTATAGTCA+AGG | + | Chr8:70027628-70027647 | MsG0880046165.01.T01:five_prime_UTR | 30.0% | |
| TTTCATGTTACCGATCAAAA+TGG | + | Chr8:70027940-70027959 | MsG0880046165.01.T01:CDS | 30.0% | |
| ! | GGAGTTTTACATTAGACATA+AGG | + | Chr8:70028751-70028770 | MsG0880046165.01.T01:intron | 30.0% |
| !! | TAGAAAAAGTTGGTGGAAAT+AGG | - | Chr8:70027507-70027526 | None:intergenic | 30.0% |
| !!! | GAACTGATTCGATGATTTTT+TGG | - | Chr8:70029129-70029148 | None:intergenic | 30.0% |
| AAGTAACTACCATGTATGCT+TGG | - | Chr8:70028643-70028662 | None:intergenic | 35.0% | |
| AAGTCATCAAAAGGTAGAGA+GGG | + | Chr8:70029196-70029215 | MsG0880046165.01.T01:CDS | 35.0% | |
| ATGTATAACAGCATCAGAGA+TGG | - | Chr8:70028390-70028409 | None:intergenic | 35.0% | |
| ATGTTAAAGACAGCATCTCT+GGG | + | Chr8:70028271-70028290 | MsG0880046165.01.T01:intron | 35.0% | |
| ATGTTTCATCTGATGGAAGA+TGG | + | Chr8:70027825-70027844 | MsG0880046165.01.T01:five_prime_UTR | 35.0% | |
| ATTTCTTGAATGCAGGTGTT+AGG | + | Chr8:70028946-70028965 | MsG0880046165.01.T01:intron | 35.0% | |
| CATAAATTAAGGAGGCTGTT+CGG | - | Chr8:70028254-70028273 | None:intergenic | 35.0% | |
| CGAATCAGTTCGTCAAAAAA+TGG | + | Chr8:70029138-70029157 | MsG0880046165.01.T01:CDS | 35.0% | |
| CTGTTATACATCCTGAAAGA+AGG | + | Chr8:70028399-70028418 | MsG0880046165.01.T01:intron | 35.0% | |
| GAGAAGGAATCTGTACAATT+TGG | + | Chr8:70029274-70029293 | MsG0880046165.01.T01:CDS | 35.0% | |
| GCTACTAAGATAAGATGGAA+TGG | + | Chr8:70027084-70027103 | MsG0880046165.01.T01:five_prime_UTR | 35.0% | |
| GTTTATGACGATTTGATCGA+AGG | + | Chr8:70026886-70026905 | MsG0880046165.01.T01:five_prime_UTR | 35.0% | |
| TAATCTTCAATAATCCTCGG+TGG | - | Chr8:70027057-70027076 | None:intergenic | 35.0% | |
| TATGTTAAAGACAGCATCTC+TGG | + | Chr8:70028270-70028289 | MsG0880046165.01.T01:intron | 35.0% | |
| TGTTGTTAATGTTCAGTGCA+AGG | + | Chr8:70028530-70028549 | MsG0880046165.01.T01:intron | 35.0% | |
| TTCTCTCGAGATTTCTTCTA+AGG | + | Chr8:70027371-70027390 | MsG0880046165.01.T01:intron | 35.0% | |
| !! | ACCTTTTGATGACTTGCAAA+AGG | - | Chr8:70029191-70029210 | None:intergenic | 35.0% |
| !! | TTACTACTTTAAAACCACCG+AGG | + | Chr8:70027040-70027059 | MsG0880046165.01.T01:five_prime_UTR | 35.0% |
| AACCCCAATTAGTTCAGAAC+CGG | + | Chr8:70028778-70028797 | MsG0880046165.01.T01:CDS | 40.0% | |
| AAGGAATAGGAGAGTTTGGT+AGG | + | Chr8:70026858-70026877 | MsG0880046165.01.T01:five_prime_UTR | 40.0% | |
| AATAGGAGAGTTTGGTAGGA+GGG | + | Chr8:70026862-70026881 | MsG0880046165.01.T01:five_prime_UTR | 40.0% | |
| ACTGTACAGAATTGGCAGAA+AGG | + | Chr8:70028499-70028518 | MsG0880046165.01.T01:intron | 40.0% | |
| ATCAATCAGTTGGAGTTGGA+GGG | + | Chr8:70029222-70029241 | MsG0880046165.01.T01:CDS | 40.0% | |
| ATCTGATGGAAGATGGTTCA+TGG | + | Chr8:70027832-70027851 | MsG0880046165.01.T01:exon | 40.0% | |
| ATGAGAACATTCCGAGAGAA+GGG | + | Chr8:70029014-70029033 | MsG0880046165.01.T01:CDS | 40.0% | |
| CAAGTCATCAAAAGGTAGAG+AGG | + | Chr8:70029195-70029214 | MsG0880046165.01.T01:CDS | 40.0% | |
| CAATTCTGTACAGTCACTAC+CGG | - | Chr8:70028493-70028512 | None:intergenic | 40.0% | |
| CCAAAGAATTCCATGCTTTC+TGG | - | Chr8:70027758-70027777 | None:intergenic | 40.0% | |
| CCATGCAACTATCAACACAA+GGG | + | Chr8:70028613-70028632 | MsG0880046165.01.T01:intron | 40.0% | |
| CTGTACAGAATTGGCAGAAA+GGG | + | Chr8:70028500-70028519 | MsG0880046165.01.T01:intron | 40.0% | |
| GAAGATCAATCAGTTGGAGT+TGG | + | Chr8:70029218-70029237 | MsG0880046165.01.T01:CDS | 40.0% | |
| GATGGAATGGTCTTCATGTA+CGG | + | Chr8:70027097-70027116 | MsG0880046165.01.T01:five_prime_UTR | 40.0% | |
| GCTAAAGTATGGACTCACAA+TGG | + | Chr8:70028228-70028247 | MsG0880046165.01.T01:intron | 40.0% | |
| GGTTTCAAAACTAAGGGATC+TGG | - | Chr8:70027311-70027330 | None:intergenic | 40.0% | |
| GTTACATTCAACCCTTCTCT+CGG | - | Chr8:70029028-70029047 | None:intergenic | 40.0% | |
| TATGCACTGAAGACAGACAA+GGG | + | Chr8:70028976-70028995 | MsG0880046165.01.T01:intron | 40.0% | |
| TCCATGCAACTATCAACACA+AGG | + | Chr8:70028612-70028631 | MsG0880046165.01.T01:intron | 40.0% | |
| TGAGAAGGAATAGGAGAGTT+TGG | + | Chr8:70026854-70026873 | MsG0880046165.01.T01:five_prime_UTR | 40.0% | |
| TGTACAGAATTGGCAGAAAG+GGG | + | Chr8:70028501-70028520 | MsG0880046165.01.T01:intron | 40.0% | |
| TGTACAGATTCCTTCTCACT+AGG | - | Chr8:70029271-70029290 | None:intergenic | 40.0% | |
| TTACTAGAAATTCCAAGCGG+TGG | - | Chr8:70026930-70026949 | None:intergenic | 40.0% | |
| TTCTATGCAACAGATGCCAT+TGG | + | Chr8:70029091-70029110 | MsG0880046165.01.T01:CDS | 40.0% | |
| ! | CCAGAAAGCATGGAATTCTT+TGG | + | Chr8:70027755-70027774 | MsG0880046165.01.T01:five_prime_UTR | 40.0% |
| ! | GCCTTTTGCAAGTCATCAAA+AGG | + | Chr8:70029187-70029206 | MsG0880046165.01.T01:CDS | 40.0% |
| !! | CAAGTTTAGTTCTGAAACGC+CGG | + | Chr8:70028471-70028490 | MsG0880046165.01.T01:intron | 40.0% |
| !! | CTGAGGTGTTTTTGCTGTAT+TGG | + | Chr8:70028178-70028197 | MsG0880046165.01.T01:intron | 40.0% |
| !! | TTTGATAGTGCCAGAAAGCA+TGG | + | Chr8:70027745-70027764 | MsG0880046165.01.T01:five_prime_UTR | 40.0% |
| !!! | CGATGATTTTTTGGTCAGCT+GGG | - | Chr8:70029120-70029139 | None:intergenic | 40.0% |
| !!! | TCGATGATTTTTTGGTCAGC+TGG | - | Chr8:70029121-70029140 | None:intergenic | 40.0% |
| AAAGGACAGAGAGAGTGAGA+AGG | + | Chr8:70026839-70026858 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| AACATTTGCAGCCAAGTCTC+CGG | - | Chr8:70029071-70029090 | None:intergenic | 45.0% | |
| AAGAAGGAAGACACGAACCT+AGG | - | Chr8:70027157-70027176 | None:intergenic | 45.0% | |
| AAGAGAGTGGGGATAGAGAA+AGG | + | Chr8:70026821-70026840 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| AAGGGTTGACCAAGCATACA+TGG | + | Chr8:70028631-70028650 | MsG0880046165.01.T01:intron | 45.0% | |
| AGAGAAGATCATGCGAGGTA+TGG | + | Chr8:70028840-70028859 | MsG0880046165.01.T01:intron | 45.0% | |
| AGTAGAGAGAAGATCATGCG+AGG | + | Chr8:70028835-70028854 | MsG0880046165.01.T01:CDS | 45.0% | |
| ATAGGAGAGTTTGGTAGGAG+GGG | + | Chr8:70026863-70026882 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| ATCTGTGCCCTTCAATTCCA+AGG | - | Chr8:70028144-70028163 | None:intergenic | 45.0% | |
| ATGCATTAAAAGCCACCGCT+TGG | + | Chr8:70026915-70026934 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| ATTGCGTTTGGAAGAGAGTG+GGG | + | Chr8:70026810-70026829 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| CACGGTCTGCAAACATCATT+TGG | - | Chr8:70028430-70028449 | None:intergenic | 45.0% | |
| CAGAGAGAGTGAGAAGGAAT+AGG | + | Chr8:70026845-70026864 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| CGGTAGTGACTGTACAGAAT+TGG | + | Chr8:70028491-70028510 | MsG0880046165.01.T01:intron | 45.0% | |
| CTATGCACTGAAGACAGACA+AGG | + | Chr8:70028975-70028994 | MsG0880046165.01.T01:intron | 45.0% | |
| CTCACTGCCTTGGAATTGAA+GGG | + | Chr8:70028134-70028153 | MsG0880046165.01.T01:intron | 45.0% | |
| GAATAGGAGAGTTTGGTAGG+AGG | + | Chr8:70026861-70026880 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| GAGAGGGAAGATCAATCAGT+TGG | + | Chr8:70029212-70029231 | MsG0880046165.01.T01:CDS | 45.0% | |
| GATCAATCAGTTGGAGTTGG+AGG | + | Chr8:70029221-70029240 | MsG0880046165.01.T01:CDS | 45.0% | |
| GATGAGAACATTCCGAGAGA+AGG | + | Chr8:70029013-70029032 | MsG0880046165.01.T01:CDS | 45.0% | |
| GATGGAAGATGGTTCATGGA+TGG | + | Chr8:70027836-70027855 | MsG0880046165.01.T01:exon | 45.0% | |
| GATTGCGTTTGGAAGAGAGT+GGG | + | Chr8:70026809-70026828 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| GGTCTGCAAACATCATTTGG+TGG | - | Chr8:70028427-70028446 | None:intergenic | 45.0% | |
| TAGAAATGGTCTCACTGCCT+TGG | + | Chr8:70028124-70028143 | MsG0880046165.01.T01:intron | 45.0% | |
| TCAATCAGTTGGAGTTGGAG+GGG | + | Chr8:70029223-70029242 | MsG0880046165.01.T01:CDS | 45.0% | |
| TCGGAATGTTCTCATCACCT+CGG | - | Chr8:70029009-70029028 | None:intergenic | 45.0% | |
| TCTCACTGCCTTGGAATTGA+AGG | + | Chr8:70028133-70028152 | MsG0880046165.01.T01:intron | 45.0% | |
| TGAGGTACGCAAGCAAAAAG+AGG | - | Chr8:70027409-70027428 | None:intergenic | 45.0% | |
| TGTCTCATAACCGTCGTTTC+AGG | + | Chr8:70027003-70027022 | MsG0880046165.01.T01:five_prime_UTR | 45.0% | |
| ! | ATGTGGTGGAGGCTAAAGTA+TGG | + | Chr8:70028217-70028236 | MsG0880046165.01.T01:intron | 45.0% |
| ! | ATTTGGTGGAGCCTTCTTTC+AGG | - | Chr8:70028413-70028432 | None:intergenic | 45.0% |
| !! | CATCTCTGGGACATCTATTG+AGG | + | Chr8:70028284-70028303 | MsG0880046165.01.T01:intron | 45.0% |
| !! | CCCTTGTGTTGATAGTTGCA+TGG | - | Chr8:70028616-70028635 | None:intergenic | 45.0% |
| !! | CTCCGGTTCTGAACTAATTG+GGG | - | Chr8:70028783-70028802 | None:intergenic | 45.0% |
| !! | GCAAGCATTGAATCACACGA+TGG | - | Chr8:70028808-70028827 | None:intergenic | 45.0% |
| !! | GCTCCGGTTCTGAACTAATT+GGG | - | Chr8:70028784-70028803 | None:intergenic | 45.0% |
| !! | AATTTAATTAATTAAATTTG+AGG | - | Chr8:70027427-70027446 | None:intergenic | 5.0% |
| ACCACATCACATTGCCAGCT+CGG | - | Chr8:70028204-70028223 | None:intergenic | 50.0% | |
| AGCACAGCTTCCTGAAACGA+CGG | - | Chr8:70027016-70027035 | None:intergenic | 50.0% | |
| ATCAAGGCGAGGATTGCGTT+TGG | + | Chr8:70026798-70026817 | MsG0880046165.01.T01:five_prime_UTR | 50.0% | |
| CATAACTACCACCGGAGACT+TGG | + | Chr8:70029057-70029076 | MsG0880046165.01.T01:CDS | 50.0% | |
| CTCTTGGAAGCCTAGTGAGA+AGG | + | Chr8:70029258-70029277 | MsG0880046165.01.T01:CDS | 50.0% | |
| GGAGAGTTAAGATCAAGGCG+AGG | + | Chr8:70026787-70026806 | MsG0880046165.01.T01:five_prime_UTR | 50.0% | |
| GGATTGCGTTTGGAAGAGAG+TGG | + | Chr8:70026808-70026827 | MsG0880046165.01.T01:five_prime_UTR | 50.0% | |
| GTCTCCGGTGGTAGTTATGT+CGG | - | Chr8:70029056-70029075 | None:intergenic | 50.0% | |
| TAGGAGAGTTTGGTAGGAGG+GGG | + | Chr8:70026864-70026883 | MsG0880046165.01.T01:five_prime_UTR | 50.0% | |
| TTGGTCAGCTGGGTATCCAA+TGG | - | Chr8:70029110-70029129 | None:intergenic | 50.0% | |
| ! | GGGGCAGTGTTATTGTCTCT+TGG | + | Chr8:70029242-70029261 | MsG0880046165.01.T01:CDS | 50.0% |
| ! | GTTTTCGCATGAGCACTCCT+AGG | + | Chr8:70027137-70027156 | MsG0880046165.01.T01:five_prime_UTR | 50.0% |
| !! | CGCTCCGGTTCTGAACTAAT+TGG | - | Chr8:70028785-70028804 | None:intergenic | 50.0% |
| !! | TTTTGCTGTATTGGCCGAGC+TGG | + | Chr8:70028187-70028206 | MsG0880046165.01.T01:intron | 50.0% |
| ATTTGCAGCCAAGTCTCCGG+TGG | - | Chr8:70029068-70029087 | None:intergenic | 55.0% | |
| CTGGCAATGTGATGTGGTGG+AGG | + | Chr8:70028206-70028225 | MsG0880046165.01.T01:intron | 55.0% | |
| GAGCTGGCAATGTGATGTGG+TGG | + | Chr8:70028203-70028222 | MsG0880046165.01.T01:intron | 55.0% | |
| GATCGCGTGGTCTTCTTCTG+AGG | + | Chr8:70028161-70028180 | MsG0880046165.01.T01:intron | 55.0% | |
| TGAATCACACGATGGCGCTC+CGG | - | Chr8:70028800-70028819 | None:intergenic | 55.0% | |
| ! | ATTGAAGGGCACAGATCGCG+TGG | + | Chr8:70028148-70028167 | MsG0880046165.01.T01:intron | 55.0% |
| ! | CGTGCCGACATAACTACCAC+CGG | + | Chr8:70029049-70029068 | MsG0880046165.01.T01:CDS | 55.0% |
| GCCGAGCTGGCAATGTGATG+TGG | + | Chr8:70028200-70028219 | MsG0880046165.01.T01:intron | 60.0% | |
| CAGACAAGGGCTTCTCGCCG+AGG | + | Chr8:70028989-70029008 | MsG0880046165.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 70026786 | 70029318 | 70026786 | ID=MsG0880046165.01;Name=MsG0880046165.01 |
| Chr8 | mRNA | 70026786 | 70029318 | 70026786 | ID=MsG0880046165.01.T01;Parent=MsG0880046165.01;Name=MsG0880046165.01.T01;_AED=0.31;_eAED=0.31;_QI=525|0.6|0.83|1|0.6|0.5|6|0|168 |
| Chr8 | exon | 70026786 | 70027158 | 70026786 | ID=MsG0880046165.01.T01:exon:27361;Parent=MsG0880046165.01.T01 |
| Chr8 | exon | 70027604 | 70027649 | 70027604 | ID=MsG0880046165.01.T01:exon:27362;Parent=MsG0880046165.01.T01 |
| Chr8 | exon | 70027745 | 70027857 | 70027745 | ID=MsG0880046165.01.T01:exon:27363;Parent=MsG0880046165.01.T01 |
| Chr8 | exon | 70027938 | 70028005 | 70027938 | ID=MsG0880046165.01.T01:exon:27364;Parent=MsG0880046165.01.T01 |
| Chr8 | exon | 70028752 | 70028856 | 70028752 | ID=MsG0880046165.01.T01:exon:27365;Parent=MsG0880046165.01.T01 |
| Chr8 | exon | 70028992 | 70029318 | 70028992 | ID=MsG0880046165.01.T01:exon:27366;Parent=MsG0880046165.01.T01 |
| Chr8 | five_prime_UTR | 70026786 | 70027158 | 70026786 | ID=MsG0880046165.01.T01:five_prime_utr;Parent=MsG0880046165.01.T01 |
| Chr8 | five_prime_UTR | 70027604 | 70027649 | 70027604 | ID=MsG0880046165.01.T01:five_prime_utr;Parent=MsG0880046165.01.T01 |
| Chr8 | five_prime_UTR | 70027745 | 70027850 | 70027745 | ID=MsG0880046165.01.T01:five_prime_utr;Parent=MsG0880046165.01.T01 |
| Chr8 | CDS | 70027851 | 70027857 | 70027851 | ID=MsG0880046165.01.T01:cds;Parent=MsG0880046165.01.T01 |
| Chr8 | CDS | 70027938 | 70028005 | 70027938 | ID=MsG0880046165.01.T01:cds;Parent=MsG0880046165.01.T01 |
| Chr8 | CDS | 70028752 | 70028856 | 70028752 | ID=MsG0880046165.01.T01:cds;Parent=MsG0880046165.01.T01 |
| Chr8 | CDS | 70028992 | 70029318 | 70028992 | ID=MsG0880046165.01.T01:cds;Parent=MsG0880046165.01.T01 |
| Gene Sequence |
| Protein sequence |
