Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041194.01.T01 | XP_013450218.1 | 95.833 | 120 | 5 | 0 | 71 | 190 | 4 | 123 | 1.89E-78 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041194.01.T01 | Q8RX01 | 65.455 | 110 | 37 | 1 | 82 | 190 | 15 | 124 | 9.83E-45 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041194.01.T01 | A0A072U4G5 | 95.833 | 120 | 5 | 0 | 71 | 190 | 4 | 123 | 9.04e-79 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000555.01 | MsG0780041194.01 | 0.804251 | 2.362611e-49 | 1.212264e-46 |
| MsG0180000680.01 | MsG0780041194.01 | 0.802710 | 4.929297e-49 | 2.431479e-46 |
| MsG0180000741.01 | MsG0780041194.01 | 0.830422 | 2.963407e-55 | 3.120652e-52 |
| MsG0180000836.01 | MsG0780041194.01 | 0.805284 | 1.437632e-49 | 7.575676e-47 |
| MsG0180001173.01 | MsG0780041194.01 | 0.819881 | 9.198702e-53 | 7.166911e-50 |
| MsG0180001566.01 | MsG0780041194.01 | 0.829264 | 5.675069e-55 | 5.779427e-52 |
| MsG0180001662.01 | MsG0780041194.01 | 0.806704 | 7.227866e-50 | 3.949801e-47 |
| MsG0180001911.01 | MsG0780041194.01 | 0.808248 | 3.399753e-50 | 1.934327e-47 |
| MsG0180002071.01 | MsG0780041194.01 | 0.810845 | 9.414593e-51 | 5.737112e-48 |
| MsG0180004437.01 | MsG0780041194.01 | 0.818337 | 2.066277e-52 | 1.542438e-49 |
| MsG0180005234.01 | MsG0780041194.01 | 0.808073 | 3.704673e-50 | 2.097957e-47 |
| MsG0180005304.01 | MsG0780041194.01 | 0.801677 | 8.041817e-49 | 3.863663e-46 |
| MsG0180005451.01 | MsG0780041194.01 | 0.804311 | 2.296111e-49 | 1.180012e-46 |
| MsG0280006367.01 | MsG0780041194.01 | 0.805688 | 1.183178e-49 | 6.300230e-47 |
| MsG0780040856.01 | MsG0780041194.01 | 0.814564 | 1.444618e-51 | 9.726786e-49 |
| MsG0780041192.01 | MsG0780041194.01 | 0.822501 | 2.290681e-53 | 1.920772e-50 |
| MsG0780041193.01 | MsG0780041194.01 | 0.860066 | 2.676458e-63 | 7.224284e-60 |
| MsG0780041194.01 | MsG0780041258.01 | 0.806864 | 6.687395e-50 | 3.669734e-47 |
| MsG0780041194.01 | MsG0780041300.01 | 0.875333 | 3.347652e-68 | 1.556770e-64 |
| MsG0780041194.01 | MsG0780041305.01 | 0.821029 | 5.016236e-53 | 4.035276e-50 |
| MsG0780041194.01 | MsG0780041390.01 | 0.837153 | 6.147595e-57 | 7.915798e-54 |
| MsG0780041194.01 | MsG0880042760.01 | 0.827762 | 1.307612e-54 | 1.274277e-51 |
| MsG0780041194.01 | MsG0880043480.01 | 0.802795 | 4.734711e-49 | 2.340597e-46 |
| MsG0780041194.01 | MsG0880043522.01 | 0.808572 | 2.899857e-50 | 1.663846e-47 |
| MsG0780041194.01 | MsG0880046027.01 | 0.804962 | 1.679348e-49 | 8.777080e-47 |
| MsG0280011293.01 | MsG0780041194.01 | 0.811633 | 6.349158e-51 | 3.950258e-48 |
| MsG0380014576.01 | MsG0780041194.01 | 0.823999 | 1.023722e-53 | 8.954487e-51 |
| MsG0680033392.01 | MsG0780041194.01 | 0.816687 | 4.863079e-52 | 3.469346e-49 |
| MsG0680035306.01 | MsG0780041194.01 | 0.805078 | 1.587699e-49 | 8.322564e-47 |
| MsG0480018640.01 | MsG0780041194.01 | 0.807313 | 5.371922e-50 | 2.982489e-47 |
| MsG0480020331.01 | MsG0780041194.01 | 0.802705 | 4.942595e-49 | 2.437681e-46 |
| MsG0480023659.01 | MsG0780041194.01 | 0.806988 | 6.295363e-50 | 3.465588e-47 |
| MsG0580024157.01 | MsG0780041194.01 | 0.837300 | 5.638389e-57 | 7.292564e-54 |
| MsG0580025184.01 | MsG0780041194.01 | 0.809793 | 1.587673e-50 | 9.410104e-48 |
| MsG0580025651.01 | MsG0780041194.01 | 0.806901 | 6.568669e-50 | 3.607885e-47 |
| MsG0580025900.01 | MsG0780041194.01 | 0.801413 | 9.108812e-49 | 4.347264e-46 |
| MsG0380015893.01 | MsG0780041194.01 | 0.807100 | 5.961609e-50 | 3.291282e-47 |
| MsG0380015980.01 | MsG0780041194.01 | 0.844318 | 8.142968e-59 | 1.309607e-55 |
| MsG0380016483.01 | MsG0780041194.01 | 0.806543 | 7.816262e-50 | 4.253966e-47 |
| MsG0380016905.01 | MsG0780041194.01 | 0.821978 | 3.027819e-53 | 2.501153e-50 |
| MsG0480018251.01 | MsG0780041194.01 | 0.800701 | 1.273818e-48 | 5.970722e-46 |
| MsG0480018292.01 | MsG0780041194.01 | 0.800307 | 1.532853e-48 | 7.113930e-46 |
| MsG0580026664.01 | MsG0780041194.01 | 0.802084 | 6.635680e-49 | 3.221297e-46 |
| MsG0580028747.01 | MsG0780041194.01 | 0.801955 | 7.052082e-49 | 3.412108e-46 |
| MsG0580029208.01 | MsG0780041194.01 | 0.803283 | 3.753963e-49 | 1.878876e-46 |
| MsG0580029801.01 | MsG0780041194.01 | 0.810617 | 1.054329e-50 | 6.385859e-48 |
| MsG0580029927.01 | MsG0780041194.01 | 0.812076 | 5.085529e-51 | 3.201988e-48 |
| MsG0280007710.01 | MsG0780041194.01 | 0.811131 | 8.163107e-51 | 5.012220e-48 |
| MsG0280008004.01 | MsG0780041194.01 | 0.837854 | 4.064403e-57 | 5.348156e-54 |
| MsG0280009748.01 | MsG0780041194.01 | 0.802273 | 6.067661e-49 | 2.959757e-46 |
| MsG0280010109.01 | MsG0780041194.01 | 0.819381 | 1.196476e-52 | 9.192059e-50 |
| MsG0780036773.01 | MsG0780041194.01 | 0.812838 | 3.466420e-51 | 2.227179e-48 |
| MsG0780039717.01 | MsG0780041194.01 | 0.817143 | 3.841751e-52 | 2.775236e-49 |
| MsG0780039777.01 | MsG0780041194.01 | 0.801801 | 7.586014e-49 | 3.656216e-46 |
| MsG0780039845.01 | MsG0780041194.01 | 0.803580 | 3.257891e-49 | 1.643244e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041194.01.T01 | MTR_7g106330 | 95.833 | 120 | 5 | 0 | 71 | 190 | 4 | 123 | 2.29e-82 | 251 |
| MsG0780041194.01.T01 | MTR_7g106330 | 69.167 | 120 | 5 | 1 | 71 | 190 | 4 | 91 | 2.93e-50 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041194.01.T01 | AT3G05675 | 65.455 | 110 | 37 | 1 | 82 | 190 | 15 | 124 | 1.00e-45 | 156 |
| MsG0780041194.01.T01 | AT3G05675 | 65.455 | 110 | 37 | 1 | 82 | 190 | 15 | 124 | 1.00e-45 | 156 |
| MsG0780041194.01.T01 | AT3G05675 | 65.455 | 110 | 37 | 1 | 82 | 190 | 15 | 124 | 1.00e-45 | 156 |
Find 32 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGATCTTATGGCTTATT+TGG | 0.124996 | 7:+87914669 | None:intergenic |
| CAAGAATCAAAGGGATCTTA+TGG | 0.269639 | 7:+87914660 | None:intergenic |
| CACACACGCAGCAACAATTT+CGG | 0.315925 | 7:+87913161 | None:intergenic |
| GAGAAGGATATCTGTGTAAT+TGG | 0.326783 | 7:-87913497 | MsG0780041194.01.T01:CDS |
| AATGAGTATAGGAGAATATA+TGG | 0.375280 | 7:-87914731 | MsG0780041194.01.T01:CDS |
| AAGATTGTTATTACAGAATC+GGG | 0.389033 | 7:+87914569 | None:intergenic |
| AAAGATTGTTATTACAGAAT+CGG | 0.391186 | 7:+87914568 | None:intergenic |
| TAAAATCATGTATGGCAAGT+TGG | 0.405983 | 7:-87914780 | None:intergenic |
| AAAATCATGTATGGCAAGTT+GGG | 0.420200 | 7:-87914779 | None:intergenic |
| CTGATCGGCTATCTGAGAAT+TGG | 0.421865 | 7:-87913367 | MsG0780041194.01.T01:CDS |
| CGCAAGAAGGTCGAGATGAT+TGG | 0.428744 | 7:-87913436 | MsG0780041194.01.T01:CDS |
| TGGCCAACTTGTCAGATACT+AGG | 0.460340 | 7:-87913347 | MsG0780041194.01.T01:CDS |
| CCTCATTCTTCTCTCTCTCA+AGG | 0.466215 | 7:-87914633 | MsG0780041194.01.T01:CDS |
| CTTCTGTACGTTGTGGTCGA+TGG | 0.471656 | 7:-87913257 | MsG0780041194.01.T01:CDS |
| ATTATATCTAAAATCATGTA+TGG | 0.474260 | 7:-87914788 | None:intergenic |
| ATGAGGATTTCAAGAATCAA+AGG | 0.495741 | 7:+87914650 | None:intergenic |
| ATGGTTCAGTTGATGATTTG+TGG | 0.499974 | 7:-87913238 | MsG0780041194.01.T01:CDS |
| TCAGTTGATGATTTGTGGCA+TGG | 0.516798 | 7:-87913233 | MsG0780041194.01.T01:CDS |
| TACAGAATCGGGATTGAGCA+TGG | 0.526319 | 7:+87914580 | None:intergenic |
| GACACATAGCAAATGAGTAT+AGG | 0.539897 | 7:-87914742 | MsG0780041194.01.T01:CDS |
| TGAGGATTTCAAGAATCAAA+GGG | 0.549223 | 7:+87914651 | None:intergenic |
| GAACCTAGTATCTGACAAGT+TGG | 0.564864 | 7:+87913344 | None:intergenic |
| CCACAACATCACTAGTTGAT+CGG | 0.567045 | 7:+87913471 | None:intergenic |
| AATTAAGGATAAGGACGAGA+AGG | 0.585063 | 7:-87913513 | MsG0780041194.01.T01:intron |
| CATGGTGTTAGAAATGCTCT+TGG | 0.588296 | 7:-87913215 | MsG0780041194.01.T01:CDS |
| CCTTGAGAGAGAGAAGAATG+AGG | 0.593674 | 7:+87914633 | None:intergenic |
| GTGAGGCTACGCACGCAAGA+AGG | 0.597661 | 7:-87913449 | MsG0780041194.01.T01:CDS |
| TATTCGACTTCTGTACGTTG+TGG | 0.606306 | 7:-87913264 | MsG0780041194.01.T01:CDS |
| GAAGTCGAATAAAGTTTACA+TGG | 0.621468 | 7:+87913276 | None:intergenic |
| CCGATCAACTAGTGATGTTG+TGG | 0.627570 | 7:-87913471 | MsG0780041194.01.T01:CDS |
| TCGGGATTGAGCATGGAACA+AGG | 0.641260 | 7:+87914587 | None:intergenic |
| CAACTAGTGATGTTGTGGTG+AGG | 0.729111 | 7:-87913466 | MsG0780041194.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAATTATAAAAACA+AGG | + | Chr7:87913505-87913524 | None:intergenic | 10.0% |
| !!! | GTTTTTATAATTTCATTTTT+AGG | - | Chr7:87913506-87913525 | MsG0780041194.01.T01:CDS | 10.0% |
| !! | TTCACTTCAATAATAATAAA+TGG | + | Chr7:87913946-87913965 | None:intergenic | 15.0% |
| !!! | TCAATAATAATAAATGGATT+TGG | + | Chr7:87913940-87913959 | None:intergenic | 15.0% |
| !! | AAGATTATCCTCTTTAATTA+AGG | - | Chr7:87914405-87914424 | MsG0780041194.01.T01:intron | 20.0% |
| !! | AATATGTTTACTCTCAATTT+AGG | + | Chr7:87914036-87914055 | None:intergenic | 20.0% |
| !! | AATTCTTTCATATCTTCAAT+TGG | - | Chr7:87913906-87913925 | MsG0780041194.01.T01:intron | 20.0% |
| !! | ATATGAAATTTGAAGAAAAG+TGG | + | Chr7:87913594-87913613 | None:intergenic | 20.0% |
| !! | TATTACTAATTACAGATAAG+AGG | + | Chr7:87914386-87914405 | None:intergenic | 20.0% |
| !!! | AAAGATTGTTATTACAGAAT+CGG | + | Chr7:87913368-87913387 | None:intergenic | 20.0% |
| !!! | TATCATTACTCCTAATTTTA+TGG | - | Chr7:87914212-87914231 | MsG0780041194.01.T01:intron | 20.0% |
| ! | AATGAGTATAGGAGAATATA+TGG | - | Chr7:87913202-87913221 | MsG0780041194.01.T01:CDS | 25.0% |
| ! | AGATATGAAAGAATTGACAT+AGG | + | Chr7:87913901-87913920 | None:intergenic | 25.0% |
| ! | AGTTAGAAAGATAAGGAAAT+AGG | + | Chr7:87913477-87913496 | None:intergenic | 25.0% |
| ! | ATAAACACTTGTGAATTGTT+TGG | + | Chr7:87913839-87913858 | None:intergenic | 25.0% |
| ! | ATCCTCTTTAATTAAGGATA+AGG | - | Chr7:87914411-87914430 | MsG0780041194.01.T01:intron | 25.0% |
| ! | ATGATATTTGTACAACCATT+TGG | + | Chr7:87914198-87914217 | None:intergenic | 25.0% |
| ! | CAAATAAACCAATCCAAAAA+TGG | - | Chr7:87913874-87913893 | MsG0780041194.01.T01:intron | 25.0% |
| ! | GATATGAAAGAATTGACATA+GGG | + | Chr7:87913900-87913919 | None:intergenic | 25.0% |
| ! | TAAACACTTGTGAATTGTTT+GGG | + | Chr7:87913838-87913857 | None:intergenic | 25.0% |
| ! | TCATAAAAGTTGAGACAAAA+TGG | + | Chr7:87914065-87914084 | None:intergenic | 25.0% |
| !! | AAGATTGTTATTACAGAATC+GGG | + | Chr7:87913367-87913386 | None:intergenic | 25.0% |
| !! | ATTCATATTATAGCTCTGTT+TGG | - | Chr7:87913614-87913633 | MsG0780041194.01.T01:intron | 25.0% |
| !! | TTAAAGAGTGTAAAAAACCT+CGG | + | Chr7:87914342-87914361 | None:intergenic | 25.0% |
| !!! | ATTGATTTTGTCCAAAACAA+GGG | + | Chr7:87914099-87914118 | None:intergenic | 25.0% |
| !!! | TATTGATTTTGTCCAAAACA+AGG | + | Chr7:87914100-87914119 | None:intergenic | 25.0% |
| AAAGTGGAAAAGCAAACTTA+CGG | + | Chr7:87913578-87913597 | None:intergenic | 30.0% | |
| AATACCGACACCATAAAATT+AGG | + | Chr7:87914225-87914244 | None:intergenic | 30.0% | |
| ATGAGGATTTCAAGAATCAA+AGG | + | Chr7:87913286-87913305 | None:intergenic | 30.0% | |
| CGTATAAGCTATAAGCTATT+TGG | - | Chr7:87913741-87913760 | MsG0780041194.01.T01:intron | 30.0% | |
| GAAGTCGAATAAAGTTTACA+TGG | + | Chr7:87914660-87914679 | None:intergenic | 30.0% | |
| GGATTAGAGTTAGAAAGATA+AGG | + | Chr7:87913484-87913503 | None:intergenic | 30.0% | |
| GTCCTTATCCTTAATTAAAG+AGG | + | Chr7:87914416-87914435 | None:intergenic | 30.0% | |
| TAACTTCTTCAAGATCCATA+CGG | - | Chr7:87913416-87913435 | MsG0780041194.01.T01:CDS | 30.0% | |
| TGAGGATTTCAAGAATCAAA+GGG | + | Chr7:87913285-87913304 | None:intergenic | 30.0% | |
| TTAGGTCGAAAAATCAAATG+CGG | + | Chr7:87913399-87913418 | None:intergenic | 30.0% | |
| ! | AACTTGCTTCTTGATTTCAA+TGG | - | Chr7:87913546-87913565 | MsG0780041194.01.T01:intron | 30.0% |
| ! | AATAATAAATGGATTTGGCC+AGG | + | Chr7:87913935-87913954 | None:intergenic | 30.0% |
| ! | ATTGCAAGTATTTTGCTGAT+CGG | - | Chr7:87914551-87914570 | MsG0780041194.01.T01:intron | 30.0% |
| ! | TACTCCTAATTTTATGGTGT+CGG | - | Chr7:87914218-87914237 | MsG0780041194.01.T01:intron | 30.0% |
| ! | TTGATTTTGTCCAAAACAAG+GGG | + | Chr7:87914098-87914117 | None:intergenic | 30.0% |
| AAAATCAATAGAGCGAGAGA+GGG | - | Chr7:87914110-87914129 | MsG0780041194.01.T01:intron | 35.0% | |
| AAGGGATCTTATGGCTTATT+TGG | + | Chr7:87913267-87913286 | None:intergenic | 35.0% | |
| AATTAAGGATAAGGACGAGA+AGG | - | Chr7:87914420-87914439 | MsG0780041194.01.T01:intron | 35.0% | |
| CAAGAATCAAAGGGATCTTA+TGG | + | Chr7:87913276-87913295 | None:intergenic | 35.0% | |
| CATATCTTCAATTGGATTCC+TGG | - | Chr7:87913914-87913933 | MsG0780041194.01.T01:intron | 35.0% | |
| GACACATAGCAAATGAGTAT+AGG | - | Chr7:87913191-87913210 | MsG0780041194.01.T01:CDS | 35.0% | |
| GAGAAGGATATCTGTGTAAT+TGG | - | Chr7:87914436-87914455 | MsG0780041194.01.T01:intron | 35.0% | |
| GTATGGATCTTGAAGAAGTT+AGG | + | Chr7:87913417-87913436 | None:intergenic | 35.0% | |
| TCTCAAAAGTTGTCACCAAA+TGG | - | Chr7:87914180-87914199 | MsG0780041194.01.T01:intron | 35.0% | |
| !! | AATTGACATAGGGCCATTTT+TGG | + | Chr7:87913890-87913909 | None:intergenic | 35.0% |
| !! | ATGGTTCAGTTGATGATTTG+TGG | - | Chr7:87914695-87914714 | MsG0780041194.01.T01:CDS | 35.0% |
| AGAGGAGAGACTCTGATTAT+TGG | + | Chr7:87914368-87914387 | None:intergenic | 40.0% | |
| CAAAATCAATAGAGCGAGAG+AGG | - | Chr7:87914109-87914128 | MsG0780041194.01.T01:intron | 40.0% | |
| CCAACTTCTTCTACTAACTG+AGG | + | Chr7:87914270-87914289 | None:intergenic | 40.0% | |
| CCACAACATCACTAGTTGAT+CGG | + | Chr7:87914465-87914484 | None:intergenic | 40.0% | |
| CCTCAGTTAGTAGAAGAAGT+TGG | - | Chr7:87914267-87914286 | MsG0780041194.01.T01:intron | 40.0% | |
| CTAACTTCTTCTACTAACCG+AGG | - | Chr7:87914322-87914341 | MsG0780041194.01.T01:intron | 40.0% | |
| GAACCTAGTATCTGACAAGT+TGG | + | Chr7:87914592-87914611 | None:intergenic | 40.0% | |
| GAGGAGAGACTCTGATTATT+GGG | + | Chr7:87914367-87914386 | None:intergenic | 40.0% | |
| GGTGAAAACAAGAACATGAG+TGG | + | Chr7:87913456-87913475 | None:intergenic | 40.0% | |
| GTGAGAAATGAAAGACCGTA+TGG | + | Chr7:87913434-87913453 | None:intergenic | 40.0% | |
| TATTCGACTTCTGTACGTTG+TGG | - | Chr7:87914669-87914688 | MsG0780041194.01.T01:CDS | 40.0% | |
| TGGAAAAGCAAACTTACGGT+AGG | + | Chr7:87913574-87913593 | None:intergenic | 40.0% | |
| ! | CATGGTGTTAGAAATGCTCT+TGG | - | Chr7:87914718-87914737 | MsG0780041194.01.T01:CDS | 40.0% |
| !! | TCAGTTGATGATTTGTGGCA+TGG | - | Chr7:87914700-87914719 | MsG0780041194.01.T01:CDS | 40.0% |
| !!! | ACATAGGGCCATTTTTGGAT+TGG | + | Chr7:87913885-87913904 | None:intergenic | 40.0% |
| !!! | ATGGCTTATTTGGCTTTTGC+TGG | + | Chr7:87913257-87913276 | None:intergenic | 40.0% |
| CAACTAGTGATGTTGTGGTG+AGG | - | Chr7:87914467-87914486 | MsG0780041194.01.T01:intron | 45.0% | |
| CACACACGCAGCAACAATTT+CGG | + | Chr7:87914775-87914794 | None:intergenic | 45.0% | |
| CCGATCAACTAGTGATGTTG+TGG | - | Chr7:87914462-87914481 | MsG0780041194.01.T01:intron | 45.0% | |
| CCTCATTCTTCTCTCTCTCA+AGG | - | Chr7:87913300-87913319 | MsG0780041194.01.T01:CDS | 45.0% | |
| CCTTGAGAGAGAGAAGAATG+AGG | + | Chr7:87913303-87913322 | None:intergenic | 45.0% | |
| CTGATCGGCTATCTGAGAAT+TGG | - | Chr7:87914566-87914585 | MsG0780041194.01.T01:intron | 45.0% | |
| TACAGAATCGGGATTGAGCA+TGG | + | Chr7:87913356-87913375 | None:intergenic | 45.0% | |
| TGGCCAACTTGTCAGATACT+AGG | - | Chr7:87914586-87914605 | MsG0780041194.01.T01:CDS | 45.0% | |
| TGTCCAAAACAAGGGGATGA+AGG | + | Chr7:87914091-87914110 | None:intergenic | 45.0% | |
| !! | CAACCTTCATCCCCTTGTTT+TGG | - | Chr7:87914085-87914104 | MsG0780041194.01.T01:intron | 45.0% |
| AATAGAGCGAGAGAGGGAGA+GGG | - | Chr7:87914116-87914135 | MsG0780041194.01.T01:intron | 50.0% | |
| CGCAAGAAGGTCGAGATGAT+TGG | - | Chr7:87914497-87914516 | MsG0780041194.01.T01:intron | 50.0% | |
| CTTCTGTACGTTGTGGTCGA+TGG | - | Chr7:87914676-87914695 | MsG0780041194.01.T01:CDS | 50.0% | |
| TCGGGATTGAGCATGGAACA+AGG | + | Chr7:87913349-87913368 | None:intergenic | 50.0% | |
| CAATAGAGCGAGAGAGGGAG+AGG | - | Chr7:87914115-87914134 | MsG0780041194.01.T01:intron | 55.0% | |
| GTGAGGCTACGCACGCAAGA+AGG | - | Chr7:87914484-87914503 | MsG0780041194.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 87913160 | 87914795 | 87913160 | ID=MsG0780041194.01;Name=MsG0780041194.01 |
| Chr7 | mRNA | 87913160 | 87914795 | 87913160 | ID=MsG0780041194.01.T01;Parent=MsG0780041194.01;Name=MsG0780041194.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0.5|0.66|1|0.5|0.33|3|0|193 |
| Chr7 | exon | 87913160 | 87913528 | 87913160 | ID=MsG0780041194.01.T01:exon:3298;Parent=MsG0780041194.01.T01 |
| Chr7 | exon | 87914583 | 87914795 | 87914583 | ID=MsG0780041194.01.T01:exon:3297;Parent=MsG0780041194.01.T01 |
| Chr7 | CDS | 87914583 | 87914795 | 87914583 | ID=MsG0780041194.01.T01:cds;Parent=MsG0780041194.01.T01 |
| Chr7 | CDS | 87913160 | 87913528 | 87913160 | ID=MsG0780041194.01.T01:cds;Parent=MsG0780041194.01.T01 |
| Gene Sequence |
| Protein sequence |
