AlfalfaGEDB | MsG0780041641.01

M. sativa cultivar ZhongmuNo.1 / MsG0780041641.01

KEGG: -
GO: -
PFAM: PF00248

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041641.01.T01	AES82651.1	84.663	163	6	1	8	170	58	201	1.98E-92	277

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041641.01.T01	Q3L181	56.875	160	49	2	8	167	195	334	5.43E-57	184

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041641.01.T01	G7L1V4	84.663	163	6	1	8	170	58	201	9.45e-93	277

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048302.01	MsG0780041641.01	0.804526	2.070363e-49	1.069879e-46
MsG0180000479.01	MsG0780041641.01	0.867124	1.724138e-65	5.952125e-62
MsG0180001104.01	MsG0780041641.01	0.830827	2.358720e-55	2.513788e-52
MsG0180003337.01	MsG0780041641.01	0.801682	8.023827e-49	3.855429e-46
MsG0180003690.01	MsG0780041641.01	0.820619	6.232150e-53	4.955579e-50
MsG0180003948.01	MsG0780041641.01	0.826687	2.365591e-54	2.234289e-51
MsG0180004300.01	MsG0780041641.01	0.807298	5.412029e-50	3.003520e-47
MsG0180005614.01	MsG0780041641.01	0.814568	1.442171e-51	9.710944e-49
MsG0180006235.01	MsG0780041641.01	0.817898	2.597357e-52	1.915480e-49
MsG0780041641.01	MsG0880041883.01	0.838383	2.971692e-57	3.973491e-54
MsG0780041641.01	MsG0880043261.01	0.811480	6.854088e-51	4.247567e-48
MsG0780041641.01	MsG0880043262.01	0.868930	4.528135e-66	1.667633e-62
MsG0780041641.01	MsG0880043921.01	0.813680	2.264629e-51	1.488631e-48
MsG0780041641.01	MsG0880044917.01	0.807908	4.017318e-50	2.264967e-47
MsG0780041641.01	MsG0880045099.01	0.839841	1.244646e-57	1.740222e-54
MsG0780041641.01	MsG0880045293.01	0.801000	1.107026e-48	5.228985e-46
MsG0780041641.01	MsG0880046615.01	0.820451	6.813674e-53	5.393408e-50
MsG0780041641.01	MsG0880046669.01	0.824219	9.088216e-54	7.999610e-51
MsG0780041641.01	MsG0880046753.01	0.818346	2.056303e-52	1.535426e-49
MsG0780041641.01	MsG0880046762.01	0.824493	7.832794e-54	6.948872e-51
MsG0780041641.01	MsG0880047012.01	0.809303	2.022551e-50	1.183239e-47
MsG0780041641.01	MsG0880047293.01	0.803627	3.185597e-49	1.608605e-46
MsG0280010868.01	MsG0780041641.01	0.810030	1.411625e-50	8.418986e-48
MsG0280011399.01	MsG0780041641.01	0.819806	9.572871e-53	7.442943e-50
MsG0380014754.01	MsG0780041641.01	0.832216	1.072581e-55	1.190921e-52
MsG0680033623.01	MsG0780041641.01	0.833205	6.095659e-56	6.971144e-53
MsG0480020263.01	MsG0780041641.01	0.808999	2.349741e-50	1.363470e-47
MsG0480021225.01	MsG0780041641.01	0.847231	1.317824e-59	2.326826e-56
MsG0480022167.01	MsG0780041641.01	0.830243	3.277604e-55	3.433931e-52
MsG0480022407.01	MsG0780041641.01	0.830763	2.445148e-55	2.600923e-52
MsG0480022480.01	MsG0780041641.01	0.818986	1.472109e-52	1.118867e-49
MsG0580024035.01	MsG0780041641.01	0.835905	1.277823e-56	1.584616e-53
MsG0580024344.01	MsG0780041641.01	0.819219	1.302939e-52	9.965259e-50
MsG0580024467.01	MsG0780041641.01	0.803847	2.867265e-49	1.456161e-46
MsG0580024478.01	MsG0780041641.01	0.864537	1.132653e-64	3.568406e-61
MsG0380015455.01	MsG0780041641.01	0.808376	3.192613e-50	1.822555e-47
MsG0380015548.01	MsG0780041641.01	0.807393	5.168149e-50	2.875241e-47
MsG0380015713.01	MsG0780041641.01	0.815551	8.723207e-52	6.032939e-49
MsG0380016018.01	MsG0780041641.01	0.807930	3.972958e-50	2.241341e-47
MsG0380018007.01	MsG0780041641.01	0.813845	2.082861e-51	1.375234e-48
MsG0480018256.01	MsG0780041641.01	0.802726	4.892516e-49	2.414372e-46
MsG0580027049.01	MsG0780041641.01	0.807160	5.790421e-50	3.201854e-47
MsG0580027626.01	MsG0780041641.01	0.826079	3.302502e-54	3.065562e-51
MsG0580027954.01	MsG0780041641.01	0.806967	6.360539e-50	3.499548e-47
MsG0580028307.01	MsG0780041641.01	0.823976	1.036437e-53	9.060857e-51
MsG0580028924.01	MsG0780041641.01	0.819980	8.734848e-53	6.824423e-50
MsG0580029767.01	MsG0780041641.01	0.808117	3.626104e-50	2.055880e-47
MsG0580029960.01	MsG0780041641.01	0.833751	4.455528e-56	5.179267e-53
MsG0580030182.01	MsG0780041641.01	0.814841	1.254771e-51	8.511178e-49
MsG0280006586.01	MsG0780041641.01	0.804625	1.974241e-49	1.022819e-46
MsG0280006884.01	MsG0780041641.01	0.804457	2.140671e-49	1.104267e-46
MsG0280007071.01	MsG0780041641.01	0.805010	1.641125e-49	8.587256e-47
MsG0280007609.01	MsG0780041641.01	0.807736	4.368678e-50	2.452279e-47
MsG0280008280.01	MsG0780041641.01	0.802715	4.918062e-49	2.426266e-46
MsG0280008590.01	MsG0780041641.01	0.841101	5.829015e-58	8.474441e-55
MsG0280008856.01	MsG0780041641.01	0.855310	6.874998e-62	1.580651e-58
MsG0280009514.01	MsG0780041641.01	0.820405	6.978838e-53	5.517200e-50
MsG0280010296.01	MsG0780041641.01	0.833855	4.196927e-56	4.894502e-53
MsG0780036852.01	MsG0780041641.01	0.838854	2.245882e-57	3.046472e-54
MsG0780037094.01	MsG0780041641.01	0.817502	3.189845e-52	2.327144e-49
MsG0780037751.01	MsG0780041641.01	0.808042	3.760636e-50	2.127894e-47
MsG0780039430.01	MsG0780041641.01	0.883159	5.680215e-71	3.559999e-67
MsG0780040030.01	MsG0780041641.01	0.831754	1.395129e-55	1.528402e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041641.01.T01	MTR_7g114970	84.663	163	6	1	8	170	58	201	2.40e-96	277
MsG0780041641.01.T01	MTR_7g114970	84.663	163	6	1	8	170	106	249	1.09e-95	277
MsG0780041641.01.T01	MTR_7g114970	84.663	163	6	1	8	170	200	343	1.16e-94	278
MsG0780041641.01.T01	MTR_1g102750	54.321	162	54	2	8	169	199	340	3.47e-57	182
MsG0780041641.01.T01	MTR_7g114980	55.556	162	52	2	8	169	208	349	2.39e-56	181
MsG0780041641.01.T01	MTR_7g114970	79.048	105	3	1	8	112	200	285	3.92e-52	168
MsG0780041641.01.T01	MTR_7g114970	78.846	104	3	1	8	111	200	284	3.11e-51	166
MsG0780041641.01.T01	MTR_7g114990	51.235	162	57	3	8	169	206	345	1.34e-50	166
MsG0780041641.01.T01	MTR_7g115010	53.049	164	55	3	8	169	187	330	1.26e-49	162
MsG0780041641.01.T01	MTR_1g102740	58.716	109	44	1	61	169	1	108	1.44e-43	140
MsG0780041641.01.T01	MTR_7g021850	44.720	161	63	5	8	167	196	331	1.38e-35	126
MsG0780041641.01.T01	MTR_1g102750	54.206	107	29	2	8	114	199	285	1.42e-33	120
MsG0780041641.01.T01	MTR_7g114980	57.143	105	25	2	8	112	208	292	1.60e-32	117
MsG0780041641.01.T01	MTR_7g021680	42.331	163	69	6	6	167	193	331	3.02e-32	118
MsG0780041641.01.T01	MTR_7g021820	42.331	163	69	6	6	167	193	331	3.02e-32	118
MsG0780041641.01.T01	MTR_7g021825	45.385	130	50	4	6	134	51	160	1.58e-29	106
MsG0780041641.01.T01	MTR_7g067855	38.926	149	55	3	56	169	8	155	8.71e-28	102
MsG0780041641.01.T01	MTR_7g021670	44.444	108	49	3	63	167	146	245	3.43e-24	95.1
MsG0780041641.01.T01	MTR_6g035180	46.552	58	31	0	112	169	7	64	1.04e-12	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041641.01.T01	AT1G60680	42.857	161	69	4	8	167	200	338	1.69e-35	126
MsG0780041641.01.T01	AT1G60710	44.172	163	68	4	6	167	197	337	1.83e-35	126
MsG0780041641.01.T01	AT1G60690	42.331	163	71	4	6	167	197	337	4.68e-35	125
MsG0780041641.01.T01	AT1G60730	41.104	163	73	4	6	167	197	337	1.73e-33	121
MsG0780041641.01.T01	AT1G60730	41.104	163	73	4	6	167	217	357	2.02e-33	121
MsG0780041641.01.T01	AT1G10810	41.104	163	73	4	6	167	145	285	5.38e-32	116
MsG0780041641.01.T01	AT1G10810	41.615	161	71	4	8	167	199	337	1.26e-31	116
MsG0780041641.01.T01	AT1G60750	39.506	162	60	3	6	167	199	322	2.00e-30	113

Find 40 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAATAAAACCGATTGTTAT+TGG	0.178666	7:-93357633	MsG0780041641.01.T01:three_prime_UTR
GACTGTCATCAGAAACAAAT+TGG	0.209028	7:+93358500	None:intergenic
TTTGAGACTCAAACTAGTTC+TGG	0.313286	7:-93357689	MsG0780041641.01.T01:three_prime_UTR
CACATTAATTATAAGTAAAC+TGG	0.315738	7:+93357538	None:intergenic
TGTTTGGTGACAACTCTTAC+AGG	0.321536	7:-93358632	MsG0780041641.01.T01:CDS
GTACTAATATATTCCTTGTT+TGG	0.328996	7:-93357505	MsG0780041641.01.T01:three_prime_UTR
TCCCCTGACACCTCAGATAT+TGG	0.333520	7:+93357802	None:intergenic
TCGAAATGACTTCGGTTGTT+TGG	0.357221	7:-93358648	None:intergenic
GTAACCTTGGTTGCATTGCC+TGG	0.401419	7:+93358259	None:intergenic
CGATTGTTATTGGTGAAATA+CGG	0.424235	7:-93357623	MsG0780041641.01.T01:three_prime_UTR
ACTCAACAAAGATGATTTGA+AGG	0.433839	7:-93357842	MsG0780041641.01.T01:CDS
CTTCACAACTTGCTCTTGCA+TGG	0.444626	7:-93358158	MsG0780041641.01.T01:CDS
CCTTACAGTCCCCTTGGCCG+TGG	0.464143	7:-93358588	MsG0780041641.01.T01:CDS
TTATCATCGGATGGAAAAGT+TGG	0.465236	7:-93358205	MsG0780041641.01.T01:CDS
GTGTCAGGGGATCGGACAAC+TGG	0.468035	7:-93357790	MsG0780041641.01.T01:CDS
CGTATTTCACCAATAACAAT+CGG	0.468386	7:+93357624	None:intergenic
GTGCCAATATCTGAGGTGTC+AGG	0.468582	7:-93357805	MsG0780041641.01.T01:CDS
GACAACTCTTACAGGGAACT+TGG	0.479074	7:-93358624	MsG0780041641.01.T01:CDS
GCAATGCAACCAAGGTTACA+AGG	0.480835	7:-93358255	MsG0780041641.01.T01:CDS
GGAAAGTTACTCACCAGGGA+TGG	0.508635	7:+93358107	None:intergenic
CCACGGCCAAGGGGACTGTA+AGG	0.509324	7:+93358588	None:intergenic
GACGATGTAGTGCCCATCCC+TGG	0.510769	7:-93358120	MsG0780041641.01.T01:intron
TCTTACAGGGAACTTGGCAT+TGG	0.523565	7:-93358618	MsG0780041641.01.T01:CDS
ACTGTCATCAGAAACAAATT+GGG	0.524263	7:+93358501	None:intergenic
TGCCAATATCTGAGGTGTCA+GGG	0.538436	7:-93357804	MsG0780041641.01.T01:CDS
CTTGCATGGATTCTTCATCA+AGG	0.547230	7:-93358144	MsG0780041641.01.T01:CDS
TATCTGAGGTGTCAGGGGAT+CGG	0.577450	7:-93357798	MsG0780041641.01.T01:CDS
TCGGATGGAAAAGTTGGCAC+AGG	0.579387	7:-93358199	MsG0780041641.01.T01:CDS
ATAGTGCCTTACAGTCCCCT+TGG	0.580787	7:-93358594	MsG0780041641.01.T01:CDS
GCCAATATCTGAGGTGTCAG+GGG	0.582430	7:-93357803	MsG0780041641.01.T01:CDS
TTCACCAGGCAATGCAACCA+AGG	0.582900	7:-93358263	MsG0780041641.01.T01:CDS
GAAAGTTACTCACCAGGGAT+GGG	0.588008	7:+93358108	None:intergenic
TTCGCAGCTCTCTCCAAACA+AGG	0.592827	7:+93357492	None:intergenic
CAATGCAACCAAGGTTACAA+GGG	0.603737	7:-93358254	MsG0780041641.01.T01:CDS
TTAATCACATAAACATAACA+TGG	0.615428	7:+93357562	None:intergenic
CATACCAGAAAACTGTCTGC+AGG	0.620973	7:+93358531	None:intergenic
GTTTGGTGACAACTCTTACA+GGG	0.623722	7:-93358631	MsG0780041641.01.T01:CDS
AAGTTGGCACAGGAGAAGCA+TGG	0.666692	7:-93358189	MsG0780041641.01.T01:CDS
AATGCAACCAAGGTTACAAG+GGG	0.675322	7:-93358253	MsG0780041641.01.T01:CDS
AGATGCTGTGCCAATATCTG+AGG	0.705973	7:-93357812	MsG0780041641.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATTTCAAATAATTTCATC+TGG	+	Chr7:93358126-93358145	None:intergenic	15.0%
!!	ATTGTTTATATTCAAACATT+TGG	+	Chr7:93357704-93357723	None:intergenic	15.0%
!!	AACAAAAGAAATCATAATTG+AGG	+	Chr7:93358156-93358175	None:intergenic	20.0%
!!	CACATTAATTATAAGTAAAC+TGG	+	Chr7:93358573-93358592	None:intergenic	20.0%
!!	TTAATCACATAAACATAACA+TGG	+	Chr7:93358549-93358568	None:intergenic	20.0%
!	AAACATTTATGAGACTGTTT+AGG	+	Chr7:93357755-93357774	None:intergenic	25.0%
!	GTACTAATATATTCCTTGTT+TGG	-	Chr7:93358603-93358622	MsG0780041641.01.T01:CDS	25.0%
!	TGAACATTCAGATTATACAA+GGG	+	Chr7:93358068-93358087	None:intergenic	25.0%
!	TGAATAAAACCGATTGTTAT+TGG	-	Chr7:93358475-93358494	MsG0780041641.01.T01:intron	25.0%
!	TTGAACATTCAGATTATACA+AGG	+	Chr7:93358069-93358088	None:intergenic	25.0%
!	TTGTATAATCTGAATGTTCA+AGG	-	Chr7:93358068-93358087	MsG0780041641.01.T01:intron	25.0%
!!	AGAACAAGATGTTTTATCAT+CGG	-	Chr7:93357890-93357909	MsG0780041641.01.T01:CDS	25.0%
!!	GTTCATTTGAGTTTATTTAC+TGG	+	Chr7:93357781-93357800	None:intergenic	25.0%
!!!	AACAATCGGTTTTATTCATA+TGG	+	Chr7:93358473-93358492	None:intergenic	25.0%
!!!	ACAATCGGTTTTATTCATAT+GGG	+	Chr7:93358472-93358491	None:intergenic	25.0%
	ACTCAACAAAGATGATTTGA+AGG	-	Chr7:93358266-93358285	MsG0780041641.01.T01:CDS	30.0%
	ACTGTCATCAGAAACAAATT+GGG	+	Chr7:93357610-93357629	None:intergenic	30.0%
	ATAATCTGAATGTTCAAGGA+AGG	-	Chr7:93358072-93358091	MsG0780041641.01.T01:intron	30.0%
	CGTATTTCACCAATAACAAT+CGG	+	Chr7:93358487-93358506	None:intergenic	30.0%
	TAATCTGAATGTTCAAGGAA+GGG	-	Chr7:93358073-93358092	MsG0780041641.01.T01:intron	30.0%
!	CGATTGTTATTGGTGAAATA+CGG	-	Chr7:93358485-93358504	MsG0780041641.01.T01:intron	30.0%
	AGTTTGAGTCTCAAAAACTG+AGG	+	Chr7:93358414-93358433	None:intergenic	35.0%
	ATAATGAACAAGGACCTGTT+TGG	+	Chr7:93357808-93357827	None:intergenic	35.0%
	ATGCTGGTGAATAATGAACA+AGG	+	Chr7:93357818-93357837	None:intergenic	35.0%
	CAAAAACTGAGGTACAATAC+TGG	+	Chr7:93358403-93358422	None:intergenic	35.0%
	GACTGTCATCAGAAACAAAT+TGG	+	Chr7:93357611-93357630	None:intergenic	35.0%
	TCAAATGAACCAATCCAAAC+AGG	-	Chr7:93357791-93357810	MsG0780041641.01.T01:CDS	35.0%
	TTATCATCGGATGGAAAAGT+TGG	-	Chr7:93357903-93357922	MsG0780041641.01.T01:intron	35.0%
!	CAAGATGTTTTATCATCGGA+TGG	-	Chr7:93357894-93357913	MsG0780041641.01.T01:CDS	35.0%
!	GCATCAAACTATGCTTTTCT+TGG	+	Chr7:93358381-93358400	None:intergenic	35.0%
!	GTGCTTTTGTTCAATGTTCA+TGG	-	Chr7:93358340-93358359	MsG0780041641.01.T01:intron	35.0%
!	TTTGAGACTCAAACTAGTTC+TGG	-	Chr7:93358419-93358438	MsG0780041641.01.T01:intron	35.0%
	AAAGTGGAAAGTTACTCACC+AGG	+	Chr7:93358009-93358028	None:intergenic	40.0%
	AAGTGGAAAGTTACTCACCA+GGG	+	Chr7:93358008-93358027	None:intergenic	40.0%
	AATGCAACCAAGGTTACAAG+GGG	-	Chr7:93357855-93357874	MsG0780041641.01.T01:CDS	40.0%
	CAATGCAACCAAGGTTACAA+GGG	-	Chr7:93357854-93357873	MsG0780041641.01.T01:CDS	40.0%
	CTCAACAAGTTAGGCATCTA+TGG	-	Chr7:93358034-93358053	MsG0780041641.01.T01:intron	40.0%
	CTTGCATGGATTCTTCATCA+AGG	-	Chr7:93357964-93357983	MsG0780041641.01.T01:intron	40.0%
	CTTTGTGACCTCAACAAGTT+AGG	-	Chr7:93358025-93358044	MsG0780041641.01.T01:intron	40.0%
	TTGTTCCTACAACACATGAC+AGG	+	Chr7:93358200-93358219	None:intergenic	40.0%
!	AAGTTTTCCCCTTGTAACCT+TGG	+	Chr7:93357865-93357884	None:intergenic	40.0%
!	ATGAGACTGTTTAGGACTCT+AGG	+	Chr7:93357747-93357766	None:intergenic	40.0%
!	GTTTGGTGACAACTCTTACA+GGG	-	Chr7:93357477-93357496	MsG0780041641.01.T01:three_prime_UTR	40.0%
!	TGTTTGGTGACAACTCTTAC+AGG	-	Chr7:93357476-93357495	MsG0780041641.01.T01:three_prime_UTR	40.0%
!!	AACTTGTTGAGGTCACAAAG+TGG	+	Chr7:93358025-93358044	None:intergenic	40.0%
!!	ACAGTTTTCTGGTATGGACT+TGG	-	Chr7:93357584-93357603	MsG0780041641.01.T01:three_prime_UTR	40.0%
!!	CATAGATGCCTAACTTGTTG+AGG	+	Chr7:93358036-93358055	None:intergenic	40.0%
	AGATGCTGTGCCAATATCTG+AGG	-	Chr7:93358296-93358315	MsG0780041641.01.T01:intron	45.0%
	CATACCAGAAAACTGTCTGC+AGG	+	Chr7:93357580-93357599	None:intergenic	45.0%
	CCTGGTGAAAAAAGAGATGC+TGG	+	Chr7:93357834-93357853	None:intergenic	45.0%
	CCTTGCCTCCAAAAAATCCA+CGG	+	Chr7:93357540-93357559	None:intergenic	45.0%
	GAAAGTTACTCACCAGGGAT+GGG	+	Chr7:93358003-93358022	None:intergenic	45.0%
	GAACAAGGACCTGTTTGGAT+TGG	+	Chr7:93357803-93357822	None:intergenic	45.0%
	GACAACTCTTACAGGGAACT+TGG	-	Chr7:93357484-93357503	MsG0780041641.01.T01:three_prime_UTR	45.0%
	GCAATGCAACCAAGGTTACA+AGG	-	Chr7:93357853-93357872	MsG0780041641.01.T01:CDS	45.0%
	TCCAAAAAATCCACGGCCAA+GGG	+	Chr7:93357533-93357552	None:intergenic	45.0%
	TCTTACAGGGAACTTGGCAT+TGG	-	Chr7:93357490-93357509	MsG0780041641.01.T01:three_prime_UTR	45.0%
	TGCAACCTGTCATGTGTTGT+AGG	-	Chr7:93358192-93358211	MsG0780041641.01.T01:CDS	45.0%
!	CTTCACAACTTGCTCTTGCA+TGG	-	Chr7:93357950-93357969	MsG0780041641.01.T01:intron	45.0%
!	TGCCAATATCTGAGGTGTCA+GGG	-	Chr7:93358304-93358323	MsG0780041641.01.T01:intron	45.0%
!	TGTACCTGCAGACAGTTTTC+TGG	-	Chr7:93357573-93357592	MsG0780041641.01.T01:three_prime_UTR	45.0%
!!	CTGCAGACAGTTTTCTGGTA+TGG	-	Chr7:93357578-93357597	MsG0780041641.01.T01:three_prime_UTR	45.0%
!!!	CCAGCATCTCTTTTTTCACC+AGG	-	Chr7:93357831-93357850	MsG0780041641.01.T01:CDS	45.0%
	AAGTTGGCACAGGAGAAGCA+TGG	-	Chr7:93357919-93357938	MsG0780041641.01.T01:intron	50.0%
	ATAGTGCCTTACAGTCCCCT+TGG	-	Chr7:93357514-93357533	MsG0780041641.01.T01:three_prime_UTR	50.0%
	CCAAAAAATCCACGGCCAAG+GGG	+	Chr7:93357532-93357551	None:intergenic	50.0%
	CTCCAAAAAATCCACGGCCA+AGG	+	Chr7:93357534-93357553	None:intergenic	50.0%
	GGAAAGTTACTCACCAGGGA+TGG	+	Chr7:93358004-93358023	None:intergenic	50.0%
	GTAACCTTGGTTGCATTGCC+TGG	+	Chr7:93357852-93357871	None:intergenic	50.0%
	TCCCCTGACACCTCAGATAT+TGG	+	Chr7:93358309-93358328	None:intergenic	50.0%
	TCGGATGGAAAAGTTGGCAC+AGG	-	Chr7:93357909-93357928	MsG0780041641.01.T01:intron	50.0%
	TTCACCAGGCAATGCAACCA+AGG	-	Chr7:93357845-93357864	MsG0780041641.01.T01:CDS	50.0%
	TTCGCAGCTCTCTCCAAACA+AGG	+	Chr7:93358619-93358638	None:intergenic	50.0%
!	GCCAATATCTGAGGTGTCAG+GGG	-	Chr7:93358305-93358324	MsG0780041641.01.T01:intron	50.0%
!	GTGCCAATATCTGAGGTGTC+AGG	-	Chr7:93358303-93358322	MsG0780041641.01.T01:intron	50.0%
!	TATCTGAGGTGTCAGGGGAT+CGG	-	Chr7:93358310-93358329	MsG0780041641.01.T01:intron	50.0%
!!!	CCGTGGATTTTTTGGAGGCA+AGG	-	Chr7:93357537-93357556	MsG0780041641.01.T01:three_prime_UTR	50.0%
!!!	CTTGGCCGTGGATTTTTTGG+AGG	-	Chr7:93357532-93357551	MsG0780041641.01.T01:three_prime_UTR	50.0%
!!!	CCCCTTGGCCGTGGATTTTT+TGG	-	Chr7:93357529-93357548	MsG0780041641.01.T01:three_prime_UTR	55.0%
	GACGATGTAGTGCCCATCCC+TGG	-	Chr7:93357988-93358007	MsG0780041641.01.T01:intron	60.0%
	GTGTCAGGGGATCGGACAAC+TGG	-	Chr7:93358318-93358337	MsG0780041641.01.T01:intron	60.0%
	CCACGGCCAAGGGGACTGTA+AGG	+	Chr7:93357523-93357542	None:intergenic	65.0%
	CCTTACAGTCCCCTTGGCCG+TGG	-	Chr7:93357520-93357539	MsG0780041641.01.T01:three_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	93357475	93358655	93357475	ID=MsG0780041641.01;Name=MsG0780041641.01
Chr7	mRNA	93357475	93358655	93357475	ID=MsG0780041641.01.T01;Parent=MsG0780041641.01;Name=MsG0780041641.01.T01;_AED=0.47;_eAED=0.50;_QI=0\|0.5\|0.33\|1\|0.5\|0.33\|3\|263\|170
Chr7	exon	93357475	93357916	93357475	ID=MsG0780041641.01.T01:exon:22105;Parent=MsG0780041641.01.T01
Chr7	exon	93358121	93358295	93358121	ID=MsG0780041641.01.T01:exon:22104;Parent=MsG0780041641.01.T01
Chr7	exon	93358497	93358655	93358497	ID=MsG0780041641.01.T01:exon:22103;Parent=MsG0780041641.01.T01
Chr7	CDS	93358497	93358655	93358497	ID=MsG0780041641.01.T01:cds;Parent=MsG0780041641.01.T01
Chr7	CDS	93358121	93358295	93358121	ID=MsG0780041641.01.T01:cds;Parent=MsG0780041641.01.T01
Chr7	CDS	93357738	93357916	93357738	ID=MsG0780041641.01.T01:cds;Parent=MsG0780041641.01.T01
Chr7	three_prime_UTR	93357475	93357737	93357475	ID=MsG0780041641.01.T01:three_prime_utr;Parent=MsG0780041641.01.T01

Gene Sequence

>MsG0780041641.01.T01

TTGTTTGGTGACAACTCTTACAGGGAACTTGGCATTGGAATAGTGCCTTACAGTCCCCTTGGCCGTGGATTTTTTGGAGGCAAGGCTATTACAGAAAGTGTACCTGCAGACAGTTTTCTGGTATGGACTTGGCCCAATTTGTTTCTGATGACAGTCATTCATCTCTTTTTTCACCAGGCAATGCAACCAAGGTTACAAGGGGAAAACTTTGACAAGAACAAGATGTTTTATCATCGGATGGAAAAGTTGGCACAGGAGAAGCATGGATGTACATCTTCACAACTTGCTCTTGCATGGATTCTTCATCAAGGAGACGATGTAGTGCCCATCCCTGGAACAACTAAGATAAAAAATCTTGAAAGTAATATCAGTTCGTTTAAAGTGAAACTCAACAAAGATGATTTGAAGGAGATTGAAGATGCTGTGCCAATATCTGAGGTGTCAGGGGATCGGACAACTGGTGCTTTTGTTCAATGTTCATGGAAGTTTGCTAATACTCCAAGAAAAGCATAG

Protein sequence

>MsG0780041641.01.T01

LFGDNSYRELGIGIVPYSPLGRGFFGGKAITESVPADSFLVWTWPNLFLMTVIHLFFHQAMQPRLQGENFDKNKMFYHRMEKLAQEKHGCTSSQLALAWILHQGDDVVPIPGTTKIKNLESNISSFKVKLNKDDLKEIEDAVPISEVSGDRTTGAFVQCSWKFANTPRKA*