AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045099.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045099.01.T01 MTR_8g064850 95.305 426 7 2 1 425 1 414 0.0 829
MsG0880045099.01.T01 MTR_8g064850 95.455 352 3 2 1 351 1 340 0.0 686
MsG0880045099.01.T01 MTR_3g077740 58.782 427 143 6 1 412 45 453 5.52e-167 492
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045099.01.T01 AT4G32180 57.798 436 145 9 1 418 50 464 1.01e-163 480
MsG0880045099.01.T01 AT4G32180 57.798 436 145 9 1 418 50 464 1.01e-163 480
MsG0880045099.01.T01 AT4G32180 57.798 436 145 9 1 418 50 464 3.17e-162 480
MsG0880045099.01.T01 AT1G60440 60.891 404 131 3 19 422 4 380 2.04e-155 444
MsG0880045099.01.T01 AT1G60440 66.883 308 90 1 115 422 8 303 1.30e-130 379
MsG0880045099.01.T01 AT1G60440 54.208 404 119 4 19 422 4 341 1.95e-127 372

Find 96 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATAGGTGGAGGCACTTTC+TGG 0.182686 8:-54187107 MsG0880045099.01.T01:CDS
TACTTAAATGCCCTTCGTTT+TGG 0.195161 8:-54185668 MsG0880045099.01.T01:CDS
GATTTCTCTGAAGTGTTTCT+AGG 0.195199 8:+54189069 None:intergenic
CCATATCTTCTTGTTAATAT+TGG 0.206082 8:-54187838 MsG0880045099.01.T01:CDS
TATCTGTTGCTGTTAATTTC+TGG 0.211148 8:-54185583 MsG0880045099.01.T01:intron
GTTGCTGGAATTAAGTTATC+AGG 0.258626 8:-54186946 MsG0880045099.01.T01:CDS
ATAGATATTGGTTGACTTCC+GGG 0.270706 8:+54188755 None:intergenic
TTAATTACCTTAATAGATAT+TGG 0.275525 8:+54188743 None:intergenic
ATGCTTGTCGGAGATATTTA+TGG 0.278415 8:-54186903 MsG0880045099.01.T01:CDS
AAAGGCAATGTCTGATAAAA+AGG 0.281844 8:-54186686 MsG0880045099.01.T01:CDS
AGAATGATTTCAAATAATAT+TGG 0.285969 8:-54186619 MsG0880045099.01.T01:CDS
GGAGGCACTTTCTGGGGTTT+AGG 0.287312 8:-54187099 MsG0880045099.01.T01:CDS
CTTCAGCTTTGATGAGTTGC+TGG 0.304425 8:-54186961 MsG0880045099.01.T01:CDS
ACATGGCCTCAAAGAATTAT+TGG 0.307848 8:-54184822 MsG0880045099.01.T01:CDS
AGGAACCATCCTGTTCTTAA+AGG 0.312390 8:-54189036 MsG0880045099.01.T01:CDS
AAGTCAACCAATATCTATTA+AGG 0.312782 8:-54188750 MsG0880045099.01.T01:intron
GATAGTGTATCCATTGTAAA+AGG 0.314727 8:+54185602 None:intergenic
CTTTAATGAAGATTTGTAAT+AGG 0.314760 8:-54184591 MsG0880045099.01.T01:three_prime_UTR
AATAGATATTGGTTGACTTC+CGG 0.321055 8:+54188754 None:intergenic
TTGCGGCATGAAGGATTTCT+TGG 0.322380 8:-54184875 MsG0880045099.01.T01:CDS
CCGAGAAGCCTATACCTATA+TGG 0.323228 8:-54187905 MsG0880045099.01.T01:CDS
ACATGAGTTGTTGATGGATT+AGG 0.328971 8:+54190574 None:intergenic
GATGGATTAGGATCGGAATT+TGG 0.330679 8:+54190586 None:intergenic
TATCATCTTGCTCTCGATAT+TGG 0.342399 8:-54190550 MsG0880045099.01.T01:CDS
TATCCCTAGCCTTTCTTTGA+AGG 0.348131 8:+54188274 None:intergenic
ACTGCAATAGCATCTAGTTT+TGG 0.351488 8:-54186709 MsG0880045099.01.T01:CDS
TTGATCACCCATATAGGTAT+AGG 0.360507 8:+54187897 None:intergenic
TATTGAGTGTAGTGTGTATT+CGG 0.368167 8:-54184705 MsG0880045099.01.T01:CDS
CCAATATTAACAAGAAGATA+TGG 0.371904 8:+54187838 None:intergenic
TTCGGCTTAGATGATGTTAT+TGG 0.371909 8:-54184687 MsG0880045099.01.T01:exon
TAACTTGGTCGGACTTTGTT+GGG 0.379531 8:+54184787 None:intergenic
CCATATAGGTATAGGCTTCT+CGG 0.381859 8:+54187905 None:intergenic
TTGAGCTTTCCTTTAAGAAC+AGG 0.385427 8:+54189027 None:intergenic
CTTCTTGTTAATATTGGATC+TGG 0.386128 8:-54187832 MsG0880045099.01.T01:CDS
TTGCCTTTGATCACCCATAT+AGG 0.387321 8:+54187891 None:intergenic
TATAGGTGGAGGCACTTTCT+GGG 0.396912 8:-54187106 MsG0880045099.01.T01:CDS
GGAAAGTTTGAGCGAGTTAG+TGG 0.402390 8:-54187135 MsG0880045099.01.T01:CDS
TCTTGACAAGGAAGATGAAA+TGG 0.404418 8:-54188249 MsG0880045099.01.T01:CDS
TTCATATAGGTGGAAGGAAA+TGG 0.417291 8:-54187156 MsG0880045099.01.T01:intron
GCTTGACCAATAATTCTTTG+AGG 0.417859 8:+54184816 None:intergenic
TGATAAACATGAGTTGTTGA+TGG 0.420275 8:+54190568 None:intergenic
ATCCCTAGCCTTTCTTTGAA+GGG 0.426273 8:+54188275 None:intergenic
AGATTACAGACCCGAAGATA+TGG 0.429533 8:-54186656 MsG0880045099.01.T01:CDS
TTACAAATCTTCATTAAAGA+AGG 0.443378 8:+54184595 None:intergenic
GTTAACATCAATGCACTTTG+TGG 0.451506 8:-54186990 MsG0880045099.01.T01:CDS
CAACTAGATGGTGAATTGTT+TGG 0.453366 8:-54184737 MsG0880045099.01.T01:CDS
GAAATGGATTGTCTTGTTGC+AGG 0.461214 8:-54188233 MsG0880045099.01.T01:CDS
ATCAACAGCGAAAGTTAACT+TGG 0.461877 8:+54184772 None:intergenic
AAGAGATCGAGCCATATCTT+CGG 0.465688 8:+54186645 None:intergenic
CGAGTTAGTGGAACGAGTAT+AGG 0.467173 8:-54187123 MsG0880045099.01.T01:CDS
ACCTCCAGGATGAAGTTTCA+TGG 0.470308 8:+54188951 None:intergenic
TTAACTTGGTCGGACTTTGT+TGG 0.484620 8:+54184786 None:intergenic
ATGCAGACCCCTTCAAAGAA+AGG 0.486872 8:-54188283 MsG0880045099.01.T01:CDS
CGAGAAGCCTATACCTATAT+GGG 0.487207 8:-54187904 MsG0880045099.01.T01:CDS
AACACTTCAGAGAAATCAAA+AGG 0.489305 8:-54189063 MsG0880045099.01.T01:CDS
AGAGATCGAGCCATATCTTC+GGG 0.493566 8:+54186646 None:intergenic
TCCCTAGCCTTTCTTTGAAG+GGG 0.495185 8:+54188276 None:intergenic
ACCATTGTTGTGAAGGCCAC+AGG 0.503696 8:-54188323 MsG0880045099.01.T01:intron
CATCTTGCTCTCGATATTGG+AGG 0.519040 8:-54190547 MsG0880045099.01.T01:intron
GAAGGATTTCTTGGAGCTGT+AGG 0.521139 8:-54184866 MsG0880045099.01.T01:CDS
CGGAGATATTTATGGTGGAA+TGG 0.522518 8:-54186895 MsG0880045099.01.T01:CDS
GATTTCAAATAATATTGGAC+AGG 0.523645 8:-54186614 MsG0880045099.01.T01:intron
ATAGGTGGAGGCACTTTCTG+GGG 0.526740 8:-54187105 MsG0880045099.01.T01:CDS
GTTGTGAAGGCCACAGGTGG+TGG 0.533246 8:-54188317 MsG0880045099.01.T01:intron
GCAATGTTCTTGCGGCATGA+AGG 0.537851 8:-54184884 MsG0880045099.01.T01:CDS
AAGATGCATGGTCAACTAGA+TGG 0.539599 8:-54184749 MsG0880045099.01.T01:CDS
AAAGAGGTAGATATGCTTGT+CGG 0.545876 8:-54186915 MsG0880045099.01.T01:CDS
TTTCAATTCATATAGGTGGA+AGG 0.547834 8:-54187162 MsG0880045099.01.T01:intron
ATCTGGTGTTAGCATGATCA+AGG 0.553570 8:-54187815 MsG0880045099.01.T01:intron
ACCCCTTCAAAGAAAGGCTA+GGG 0.559074 8:-54188277 MsG0880045099.01.T01:CDS
TTCGCTGTTGATAAGATGCA+TGG 0.566331 8:-54184761 MsG0880045099.01.T01:CDS
AGAATTATTGGTCAAGCAAG+AGG 0.566501 8:-54184810 MsG0880045099.01.T01:CDS
TTGCTGGAATTAAGTTATCA+GGG 0.566970 8:-54186945 MsG0880045099.01.T01:CDS
AGTTGTTGATGGATTAGGAT+CGG 0.569966 8:+54190579 None:intergenic
TCCTCTTCAGCCCAAAACGA+AGG 0.571979 8:+54185657 None:intergenic
AAGACCATGAAACTTCATCC+TGG 0.584192 8:-54188955 MsG0880045099.01.T01:CDS
GACCCCTTCAAAGAAAGGCT+AGG 0.589090 8:-54188278 MsG0880045099.01.T01:CDS
CAGAGAAATCAAAAGGCAGA+AGG 0.591700 8:-54189056 MsG0880045099.01.T01:CDS
CTTGTCGGAGATATTTATGG+TGG 0.598989 8:-54186900 MsG0880045099.01.T01:CDS
AGTCGGCAGCAAGAAAATCC+CGG 0.600104 8:-54188773 MsG0880045099.01.T01:CDS
TGGTGATGAATTCAGGTAGT+CGG 0.600307 8:-54188790 MsG0880045099.01.T01:intron
ATACCTATATGGGTGATCAA+AGG 0.601771 8:-54187894 MsG0880045099.01.T01:CDS
CCTCTTCAGCCCAAAACGAA+GGG 0.612270 8:+54185658 None:intergenic
GTTAGTGGAACGAGTATAGG+TGG 0.612326 8:-54187120 MsG0880045099.01.T01:CDS
ATGTTTATCAGAACTCATGA+AGG 0.615934 8:+54184841 None:intergenic
AGGCGAAAGCAATGTTCTTG+CGG 0.618547 8:-54184892 MsG0880045099.01.T01:CDS
ACAGCGAAAGTTAACTTGGT+CGG 0.621202 8:+54184776 None:intergenic
TGGTGGAATGGACTATGCAA+AGG 0.622264 8:-54186883 MsG0880045099.01.T01:intron
GCTTTCCTTTAAGAACAGGA+TGG 0.628821 8:+54189031 None:intergenic
TTTGTATGAACCACCACCTG+TGG 0.635445 8:+54188307 None:intergenic
GCTAGGGATAAATCTTGACA+AGG 0.666525 8:-54188261 MsG0880045099.01.T01:CDS
AGTGGAACGAGTATAGGTGG+AGG 0.675883 8:-54187117 MsG0880045099.01.T01:CDS
TTATCAGGGCAACAACAAAG+AGG 0.690955 8:-54186931 MsG0880045099.01.T01:CDS
ACCATGAAACTTCATCCTGG+AGG 0.702347 8:-54188952 MsG0880045099.01.T01:intron
ATTGTTGTGAAGGCCACAGG+TGG 0.737174 8:-54188320 MsG0880045099.01.T01:intron
TTCATGAGTTCTGATAAACA+TGG 0.742858 8:-54184839 MsG0880045099.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTAAAAAATTCAGAAT+TGG + Chr8:54187913-54187932 None:intergenic 10.0%
!! ATTTATTTGATGTTTAAATA+TGG + Chr8:54186993-54187012 None:intergenic 10.0%
!! TTTATTTGATGTTTAAATAT+GGG + Chr8:54186992-54187011 None:intergenic 10.0%
!! AAATGCTATTAAAATTAAGT+AGG - Chr8:54187819-54187838 MsG0880045099.01.T01:CDS 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + Chr8:54187838-54187819 None:intergenic 15.0%
!! AAGAAGAAAAATAAACAAAA+TGG - Chr8:54184491-54184510 MsG0880045099.01.T01:three_prime_UTR 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - Chr8:54187820-54187839 MsG0880045099.01.T01:CDS 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + Chr8:54187839-54187820 None:intergenic 15.0%
!! ACAATAAATATATAAATAGG+AGG + Chr8:54189356-54189375 None:intergenic 15.0%
!! AGAATGATTTCAAATAATAT+TGG - Chr8:54188504-54188523 MsG0880045099.01.T01:intron 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - Chr8:54187631-54187650 MsG0880045099.01.T01:intron 15.0%
!! ATTGGAAGAATATAAAATTT+AGG + Chr8:54187895-54187914 None:intergenic 15.0%
!! TAATAAACGTTTAAATAAGT+TGG + Chr8:54184798-54184817 None:intergenic 15.0%
!! TGCACAATAAATATATAAAT+AGG + Chr8:54189359-54189378 None:intergenic 15.0%
!! TTAATTACCTTAATAGATAT+TGG + Chr8:54186383-54186402 None:intergenic 15.0%
!! TTGGAAGAATATAAAATTTA+GGG + Chr8:54187894-54187913 None:intergenic 15.0%
!!! AATTTTGCAATAATTTTTTG+CGG - Chr8:54187666-54187685 MsG0880045099.01.T01:intron 15.0%
!!! ATGATCATTTTTTTTTATGA+AGG - Chr8:54185313-54185332 MsG0880045099.01.T01:intron 15.0%
!!! TAATTTTTTTTTGTTGAACA+TGG + Chr8:54189841-54189860 None:intergenic 15.0%
!!! TGAATCTTTGTTTATTTTTT+AGG - Chr8:54190198-54190217 MsG0880045099.01.T01:intron 15.0%
!! AAAAAAATAACTTAAGGCAT+AGG - Chr8:54185015-54185034 MsG0880045099.01.T01:intron 20.0%
!! AAAAAATAAAACCAAATTGC+AGG + Chr8:54188664-54188683 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - Chr8:54187758-54187777 MsG0880045099.01.T01:intron 20.0%
!! AAGATTATTTATTGAACGAA+TGG + Chr8:54187040-54187059 None:intergenic 20.0%
!! AATATTTGATTACAGTGTAT+GGG + Chr8:54186254-54186273 None:intergenic 20.0%
!! AATCTCAAATGAGTTATTAT+TGG + Chr8:54189658-54189677 None:intergenic 20.0%
!! ACAAATTTCGAATTTATAGA+AGG - Chr8:54185222-54185241 MsG0880045099.01.T01:intron 20.0%
!! ATCAAAATTGATCAGAATAT+TGG + Chr8:54184718-54184737 None:intergenic 20.0%
!! ATTCAAGATACATAAATTCT+AGG - Chr8:54187339-54187358 MsG0880045099.01.T01:intron 20.0%
!! ATTGTATCATCATATTAATC+AGG + Chr8:54188295-54188314 None:intergenic 20.0%
!! CATTAAAATTGAACAGAAAA+TGG - Chr8:54189232-54189251 MsG0880045099.01.T01:intron 20.0%
!! CTTTAATGAAGATTTGTAAT+AGG - Chr8:54190532-54190551 MsG0880045099.01.T01:intron 20.0%
!! GCAATTTAAAAAAGATTTAG+TGG - Chr8:54188778-54188797 MsG0880045099.01.T01:CDS 20.0%
!! GTTCAAAAATTAAGAGTTTA+AGG + Chr8:54187504-54187523 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - Chr8:54187757-54187776 MsG0880045099.01.T01:intron 20.0%
!! TAATAGGATAATCCAATATA+AGG - Chr8:54185088-54185107 MsG0880045099.01.T01:intron 20.0%
!! TTAAACATCAAATAAATGAC+TGG - Chr8:54186996-54187015 MsG0880045099.01.T01:intron 20.0%
!! TTACAAATCTTCATTAAAGA+AGG + Chr8:54190531-54190550 None:intergenic 20.0%
!! TTCAAGATACATAAATTCTA+GGG - Chr8:54187340-54187359 MsG0880045099.01.T01:intron 20.0%
!! TTGTTTATTAATCCTATACT+AGG - Chr8:54189045-54189064 MsG0880045099.01.T01:CDS 20.0%
!!! AACATATATGCTAAACTTTT+GGG + Chr8:54187069-54187088 None:intergenic 20.0%
!!! AATATTCTGATCAATTTTGA+TGG - Chr8:54184717-54184736 MsG0880045099.01.T01:CDS 20.0%
!!! AATATTTATGTCACTTTAAG+CGG - Chr8:54189378-54189397 MsG0880045099.01.T01:intron 20.0%
!!! ATACATTGCATTTTATTGAA+TGG + Chr8:54186729-54186748 None:intergenic 20.0%
!!! ATTACTCTAAACGTTTTAAA+TGG - Chr8:54188313-54188332 MsG0880045099.01.T01:intron 20.0%
!!! CTATTTTTCTATTACATTTC+TGG + Chr8:54190560-54190579 None:intergenic 20.0%
!!! GACTTTTGATTAAAAAGAAA+AGG - Chr8:54185443-54185462 MsG0880045099.01.T01:intron 20.0%
!!! TATGCCTTAAGTTATTTTTT+TGG + Chr8:54185016-54185035 None:intergenic 20.0%
!!! TCAATGTTTTCAATTCATAT+AGG - Chr8:54187954-54187973 MsG0880045099.01.T01:intron 20.0%
!!! TGTTTATTTTTTAGGTCTAA+AGG - Chr8:54190206-54190225 MsG0880045099.01.T01:intron 20.0%
!!! TTTAGAATTAAGCTGTTTTT+GGG - Chr8:54184769-54184788 MsG0880045099.01.T01:CDS 20.0%
!!! TTTTAGAATTAAGCTGTTTT+TGG - Chr8:54184768-54184787 MsG0880045099.01.T01:CDS 20.0%
!!! TTTTAGGACATATTCATTAT+GGG - Chr8:54188091-54188110 MsG0880045099.01.T01:intron 20.0%
!!! TTTTCATTGATATAAACAAG+TGG + Chr8:54190586-54190605 None:intergenic 20.0%
!!! TTTTGATTTTGTTAGAATTG+TGG - Chr8:54185474-54185493 MsG0880045099.01.T01:intron 20.0%
!!! TTTTTAGGACATATTCATTA+TGG - Chr8:54188090-54188109 MsG0880045099.01.T01:intron 20.0%
! AAAATTAGAATTCTGTCCAA+TGG - Chr8:54189255-54189274 MsG0880045099.01.T01:intron 25.0%
! AAGTCAACCAATATCTATTA+AGG - Chr8:54186373-54186392 MsG0880045099.01.T01:intron 25.0%
! AATACAGAGAAGACAAAAAT+AGG + Chr8:54188747-54188766 None:intergenic 25.0%
! ACTACTACTAACAGTAAAAA+TGG + Chr8:54184642-54184661 None:intergenic 25.0%
! AGCATAATTAGTATGTTAGT+AGG + Chr8:54186942-54186961 None:intergenic 25.0%
! AGGAGATTAAATTAACACTA+AGG - Chr8:54185614-54185633 MsG0880045099.01.T01:CDS 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - Chr8:54187791-54187810 MsG0880045099.01.T01:intron 25.0%
! ATACAATACAAGAGAATCAA+AGG + Chr8:54185592-54185611 None:intergenic 25.0%
! ATACAGAGAAGACAAAAATA+GGG + Chr8:54188746-54188765 None:intergenic 25.0%
! ATTGATCAGAATATTGGAAA+AGG + Chr8:54184712-54184731 None:intergenic 25.0%
! CAACCATTATAAACATAGAA+AGG + Chr8:54188705-54188724 None:intergenic 25.0%
! CAAGCCAAAAAAATAACTTA+AGG - Chr8:54185009-54185028 MsG0880045099.01.T01:intron 25.0%
! CCAATATTAACAAGAAGATA+TGG + Chr8:54187288-54187307 None:intergenic 25.0%
! CCATATCTTCTTGTTAATAT+TGG - Chr8:54187285-54187304 MsG0880045099.01.T01:intron 25.0%
! CTAAGTTTATTGTTGAGAAT+GGG - Chr8:54185384-54185403 MsG0880045099.01.T01:intron 25.0%
! CTTTCTATGTTTATAATGGT+TGG - Chr8:54188703-54188722 MsG0880045099.01.T01:intron 25.0%
! GAATATTTGATTACAGTGTA+TGG + Chr8:54186255-54186274 None:intergenic 25.0%
! GATTCTCTTGTATTGTATAT+AGG - Chr8:54185594-54185613 MsG0880045099.01.T01:CDS 25.0%
! GATTTCAAATAATATTGGAC+AGG - Chr8:54188509-54188528 MsG0880045099.01.T01:intron 25.0%
! GGAGATTAAATTAACACTAA+GGG - Chr8:54185615-54185634 MsG0880045099.01.T01:CDS 25.0%
! GTACCTTTCTATGTTTATAA+TGG - Chr8:54188699-54188718 MsG0880045099.01.T01:intron 25.0%
! TAAGAATTTAACTCTGCAAT+TGG + Chr8:54189322-54189341 None:intergenic 25.0%
! TAATGAGTACGGTATTATTT+GGG - Chr8:54185922-54185941 MsG0880045099.01.T01:intron 25.0%
! TACACAAACACTTGTATAAT+AGG - Chr8:54185072-54185091 MsG0880045099.01.T01:intron 25.0%
! TCGAATTTATAGAAGGATTA+TGG - Chr8:54185229-54185248 MsG0880045099.01.T01:intron 25.0%
! TCTAAGTTTATTGTTGAGAA+TGG - Chr8:54185383-54185402 MsG0880045099.01.T01:intron 25.0%
! TTAATGAGTACGGTATTATT+TGG - Chr8:54185921-54185940 MsG0880045099.01.T01:intron 25.0%
! TTACGTCAATTAATTGTAAC+TGG - Chr8:54186313-54186332 MsG0880045099.01.T01:intron 25.0%
! TTATGTTAGATATTAGCGTT+TGG - Chr8:54188986-54189005 MsG0880045099.01.T01:CDS 25.0%
! TTGATCAGAATATTGGAAAA+GGG + Chr8:54184711-54184730 None:intergenic 25.0%
! TTGTTCAATGTTAGAAATGT+GGG + Chr8:54185731-54185750 None:intergenic 25.0%
! TTTCTGATTAAAATCATGTC+AGG + Chr8:54190166-54190185 None:intergenic 25.0%
! TTTGTTCAATGTTAGAAATG+TGG + Chr8:54185732-54185751 None:intergenic 25.0%
!! AACTAATATGGATTATGTTG+TGG - Chr8:54189612-54189631 MsG0880045099.01.T01:intron 25.0%
!! AAGTTTTTGTGAATGTTGTA+AGG + Chr8:54189690-54189709 None:intergenic 25.0%
!! ACAACATTCACAAAAACTTT+TGG - Chr8:54189691-54189710 MsG0880045099.01.T01:intron 25.0%
!! ACTAATATGGATTATGTTGT+GGG - Chr8:54189613-54189632 MsG0880045099.01.T01:intron 25.0%
!! AGTTTTTGTGAATGTTGTAA+GGG + Chr8:54189689-54189708 None:intergenic 25.0%
!! ATGTTCAACTAGTATTGTTT+TGG + Chr8:54189727-54189746 None:intergenic 25.0%
!! ATGTTTTCAATTCATATAGG+TGG - Chr8:54187957-54187976 MsG0880045099.01.T01:intron 25.0%
!! CAACATATATGCTAAACTTT+TGG + Chr8:54187070-54187089 None:intergenic 25.0%
!! CTTGGTAATTTCTTAACAAT+AGG - Chr8:54185137-54185156 MsG0880045099.01.T01:intron 25.0%
!! GCTTAGAATTATGTTTTCTT+AGG - Chr8:54185841-54185860 MsG0880045099.01.T01:intron 25.0%
!! TAACATGCAAAGTATCATTT+AGG + Chr8:54188834-54188853 None:intergenic 25.0%
!! TGTTATTGATAGTTGTTTGA+TGG - Chr8:54188849-54188868 MsG0880045099.01.T01:intron 25.0%
!! TTCTTTCATTGATAACAGAT+TGG - Chr8:54188381-54188400 MsG0880045099.01.T01:intron 25.0%
!! TTGATTTTTACTAAGCTTCT+AGG + Chr8:54186606-54186625 None:intergenic 25.0%
!! TTTTATTAGCGAATCTTCTT+GGG - Chr8:54189016-54189035 MsG0880045099.01.T01:CDS 25.0%
!!! AACTACAATTTTAGCACATT+CGG - Chr8:54190001-54190020 MsG0880045099.01.T01:intron 25.0%
!!! ACAAAAACTTTTGGTTCTAT+AGG - Chr8:54189700-54189719 MsG0880045099.01.T01:intron 25.0%
!!! ATATTTATGTCACTTTAAGC+GGG - Chr8:54189379-54189398 MsG0880045099.01.T01:intron 25.0%
!!! GATGATGATTATTTTGTTGA+CGG - Chr8:54186015-54186034 MsG0880045099.01.T01:intron 25.0%
!!! TACCACATTGATTAGTTTTA+TGG - Chr8:54187093-54187112 MsG0880045099.01.T01:CDS 25.0%
!!! TATCAAACTTTGTTTTAGCA+GGG + Chr8:54187476-54187495 None:intergenic 25.0%
!!! TTATCAAACTTTGTTTTAGC+AGG + Chr8:54187477-54187496 None:intergenic 25.0%
AAACATAATTCTAAGCTGAG+AGG + Chr8:54185837-54185856 None:intergenic 30.0%
AAAGGCAATGTCTGATAAAA+AGG - Chr8:54188437-54188456 MsG0880045099.01.T01:intron 30.0%
AACAACAACCTTATCCAATT+AGG + Chr8:54185290-54185309 None:intergenic 30.0%
AACACTTCAGAGAAATCAAA+AGG - Chr8:54186060-54186079 MsG0880045099.01.T01:intron 30.0%
AACATTATCTTAGGGCTATT+CGG - Chr8:54188341-54188360 MsG0880045099.01.T01:intron 30.0%
AATCTATACTAGTGCACTTA+CGG - Chr8:54184983-54185002 MsG0880045099.01.T01:intron 30.0%
AATGAAAACCATTGTTGTGA+AGG - Chr8:54186793-54186812 MsG0880045099.01.T01:intron 30.0%
ACAAGATTAGAACACTATGA+AGG - Chr8:54187535-54187554 MsG0880045099.01.T01:intron 30.0%
ATAAGGGAAACAGAAACAAA+TGG + Chr8:54186438-54186457 None:intergenic 30.0%
ATGAAGCGAATAAAAAGGAA+TGG - Chr8:54189172-54189191 MsG0880045099.01.T01:intron 30.0%
ATGGAGATCAACATTATCTT+AGG - Chr8:54188332-54188351 MsG0880045099.01.T01:intron 30.0%
ATGTTTATCAGAACTCATGA+AGG + Chr8:54190285-54190304 None:intergenic 30.0%
CACAAACAACTACACTATTA+TGG + Chr8:54187119-54187138 None:intergenic 30.0%
CACTAGATACATTGTACAAA+TGG + Chr8:54188613-54188632 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG - Chr8:54187790-54187809 MsG0880045099.01.T01:intron 30.0%
CTGTTATGAAGCGAATAAAA+AGG - Chr8:54189167-54189186 MsG0880045099.01.T01:intron 30.0%
CTTCTTGTTAATATTGGATC+TGG - Chr8:54187291-54187310 MsG0880045099.01.T01:intron 30.0%
GATAGTGTATCCATTGTAAA+AGG + Chr8:54189524-54189543 None:intergenic 30.0%
GGCATTATTATAGCAGTAAA+TGG + Chr8:54185571-54185590 None:intergenic 30.0%
TAATGCATGGAAAGTTTGAT+AGG - Chr8:54190107-54190126 MsG0880045099.01.T01:intron 30.0%
TAGTTGAATTGCTATCACTT+AGG - Chr8:54185356-54185375 MsG0880045099.01.T01:intron 30.0%
TATTGAGTGTAGTGTGTATT+CGG - Chr8:54190418-54190437 MsG0880045099.01.T01:intron 30.0%
TGAATACACCTAATTGGATA+AGG - Chr8:54185279-54185298 MsG0880045099.01.T01:intron 30.0%
TGATAAACATGAGTTGTTGA+TGG + Chr8:54184558-54184577 None:intergenic 30.0%
TGGAGATCAACATTATCTTA+GGG - Chr8:54188333-54188352 MsG0880045099.01.T01:intron 30.0%
TGTAACTGAATACACCTAAT+TGG - Chr8:54185273-54185292 MsG0880045099.01.T01:intron 30.0%
TTCTTAGTCGCTAAAAAAGA+AGG - Chr8:54188805-54188824 MsG0880045099.01.T01:intron 30.0%
TTGCTGGAATTAAGTTATCA+GGG - Chr8:54188178-54188197 MsG0880045099.01.T01:intron 30.0%
TTTCAATTCATATAGGTGGA+AGG - Chr8:54187961-54187980 MsG0880045099.01.T01:intron 30.0%
! AAAATGATTTGTAGCATCTC+TGG - Chr8:54185750-54185769 MsG0880045099.01.T01:intron 30.0%
! AATAGATATTGGTTGACTTC+CGG + Chr8:54186372-54186391 None:intergenic 30.0%
! AATTCTCAAAGTGCTTAAGA+AGG + Chr8:54187146-54187165 None:intergenic 30.0%
! AGCTTGTTTACACCTTATAT+TGG + Chr8:54185103-54185122 None:intergenic 30.0%
! AGCTTTTACATACATATGCA+TGG - Chr8:54188963-54188982 MsG0880045099.01.T01:CDS 30.0%
! ATGTTTAGTATTGAAGCACT+TGG - Chr8:54186747-54186766 MsG0880045099.01.T01:intron 30.0%
! GTTTTCATTATGCAGATGTT+AGG + Chr8:54189127-54189146 None:intergenic 30.0%
! TATCTGTTGCTGTTAATTTC+TGG - Chr8:54189540-54189559 MsG0880045099.01.T01:intron 30.0%
! TGATTTTGTTAGAATTGTGG+AGG - Chr8:54185477-54185496 MsG0880045099.01.T01:intron 30.0%
! TGTCTTGTTCTTCTTTCTAT+AGG - Chr8:54187188-54187207 MsG0880045099.01.T01:intron 30.0%
! TTAGTTATGAAGCACCAAAT+TGG + Chr8:54189598-54189617 None:intergenic 30.0%
! TTCATGAGTTCTGATAAACA+TGG - Chr8:54190284-54190303 MsG0880045099.01.T01:intron 30.0%
! TTGGTGCTTCATAACTAATA+TGG - Chr8:54189600-54189619 MsG0880045099.01.T01:intron 30.0%
! TTTAAGCGGGAAATGAATTT+TGG - Chr8:54189392-54189411 MsG0880045099.01.T01:intron 30.0%
!! ACTACAATTTTAGCACATTC+GGG - Chr8:54190002-54190021 MsG0880045099.01.T01:intron 30.0%
!! GTTTTATTAGCGAATCTTCT+TGG - Chr8:54189015-54189034 MsG0880045099.01.T01:CDS 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - Chr8:54187851-54187870 MsG0880045099.01.T01:CDS 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + Chr8:54187870-54187851 None:intergenic 30.0%
!! TGATCAATTTTGATGGAGAT+TGG - Chr8:54184724-54184743 MsG0880045099.01.T01:CDS 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - Chr8:54187850-54187869 MsG0880045099.01.T01:CDS 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + Chr8:54187869-54187850 None:intergenic 30.0%
!!! AATAGCATCTAGTTTTGGAA+AGG - Chr8:54188419-54188438 MsG0880045099.01.T01:intron 30.0%
!!! ATTTTTTAGGTCTAAAGGTG+AGG - Chr8:54190211-54190230 MsG0880045099.01.T01:intron 30.0%
!!! TTGGTGGATTTTTTATTCAG+AGG - Chr8:54189495-54189514 MsG0880045099.01.T01:intron 30.0%
AAAGAGGTAGATATGCTTGT+CGG - Chr8:54188208-54188227 MsG0880045099.01.T01:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG - Chr8:54187835-54187854 MsG0880045099.01.T01:CDS 35.0%
AAGTAGGGACTAAACTTACA+AGG + Chr8:54187854-54187835 None:intergenic 35.0%
AATGTGGGAAACAAACACAA+TGG + Chr8:54185716-54185735 None:intergenic 35.0%
AATGTTCTCTGTCTGTTGAT+AGG - Chr8:54185961-54185980 MsG0880045099.01.T01:intron 35.0%
ACATGGCCTCAAAGAATTAT+TGG - Chr8:54190301-54190320 MsG0880045099.01.T01:intron 35.0%
AGAATTATTGGTCAAGCAAG+AGG - Chr8:54190313-54190332 MsG0880045099.01.T01:intron 35.0%
ATACCTATATGGGTGATCAA+AGG - Chr8:54187229-54187248 MsG0880045099.01.T01:intron 35.0%
ATCAACAGCGAAAGTTAACT+TGG + Chr8:54190354-54190373 None:intergenic 35.0%
ATGCTTGTCGGAGATATTTA+TGG - Chr8:54188220-54188239 MsG0880045099.01.T01:CDS 35.0%
ATGTTAGGTTAGAGAATGGT+AGG + Chr8:54189112-54189131 None:intergenic 35.0%
CAACTAGATGGTGAATTGTT+TGG - Chr8:54190386-54190405 MsG0880045099.01.T01:intron 35.0%
CAGACTATCTTAATCTAGTG+AGG - Chr8:54185800-54185819 MsG0880045099.01.T01:intron 35.0%
CTACTGAAATCAGTGCAAAA+TGG + Chr8:54188916-54188935 None:intergenic 35.0%
CTAGATTAAGATAGTCTGCA+AGG + Chr8:54185798-54185817 None:intergenic 35.0%
GAATATTGTTGTGTGCACAA+TGG - Chr8:54188880-54188899 MsG0880045099.01.T01:intron 35.0%
GACAAAGACTATCAAGTATC+AGG + Chr8:54186232-54186251 None:intergenic 35.0%
GCTTGACCAATAATTCTTTG+AGG + Chr8:54190310-54190329 None:intergenic 35.0%
GGACACAAATTCAATAGCTA+AGG + Chr8:54186564-54186583 None:intergenic 35.0%
GGCAGAGTTAAATATGATTG+TGG - Chr8:54188935-54188954 MsG0880045099.01.T01:intron 35.0%
GGCCATAAAACTAATCAATG+TGG + Chr8:54187098-54187117 None:intergenic 35.0%
GTTAACATCAATGCACTTTG+TGG - Chr8:54188133-54188152 MsG0880045099.01.T01:intron 35.0%
GTTGCTGGAATTAAGTTATC+AGG - Chr8:54188177-54188196 MsG0880045099.01.T01:intron 35.0%
TAGAAGGATTATGGTTCAAC+AGG - Chr8:54185238-54185257 MsG0880045099.01.T01:intron 35.0%
TAGCACTTGTGATCAACAAT+AGG - Chr8:54185174-54185193 MsG0880045099.01.T01:intron 35.0%
TAGCTATTGAATTTGTGTCC+TGG - Chr8:54186564-54186583 MsG0880045099.01.T01:intron 35.0%
TATCATCTTGCTCTCGATAT+TGG - Chr8:54184573-54184592 MsG0880045099.01.T01:three_prime_UTR 35.0%
TATGAAGGTTGAAGTGATCA+TGG - Chr8:54185328-54185347 MsG0880045099.01.T01:intron 35.0%
TCAATTGAAGTCCAATCGTT+CGG - Chr8:54184853-54184872 MsG0880045099.01.T01:CDS 35.0%
TCTTGACAAGGAAGATGAAA+TGG - Chr8:54186874-54186893 MsG0880045099.01.T01:intron 35.0%
TGAACACAAAAGATAGCCTT+CGG - Chr8:54189759-54189778 MsG0880045099.01.T01:intron 35.0%
TTCAGCTAGCATTTGAACTA+AGG + Chr8:54184884-54184903 None:intergenic 35.0%
TTCATATAGGTGGAAGGAAA+TGG - Chr8:54187967-54187986 MsG0880045099.01.T01:intron 35.0%
TTCGGCTTAGATGATGTTAT+TGG - Chr8:54190436-54190455 MsG0880045099.01.T01:intron 35.0%
TTCTTAGACTAGAAAACCGT+CGG - Chr8:54185677-54185696 MsG0880045099.01.T01:CDS 35.0%
TTGAACGAATGGCAGAAAAA+TGG + Chr8:54187029-54187048 None:intergenic 35.0%
TTGATCACCCATATAGGTAT+AGG + Chr8:54187229-54187248 None:intergenic 35.0%
! ACGGTATTATTTGGGTTTCT+TGG - Chr8:54185930-54185949 MsG0880045099.01.T01:intron 35.0%
! ACTTAAATGCCCTTCGTTTT+GGG - Chr8:54189456-54189475 MsG0880045099.01.T01:intron 35.0%
! ATAGATATTGGTTGACTTCC+GGG + Chr8:54186371-54186390 None:intergenic 35.0%
! CTTTGAGAATTTCGCAATAC+AGG - Chr8:54187155-54187174 MsG0880045099.01.T01:intron 35.0%
! TACTTAAATGCCCTTCGTTT+TGG - Chr8:54189455-54189474 MsG0880045099.01.T01:intron 35.0%
! TTGAGCTTTCCTTTAAGAAC+AGG + Chr8:54186099-54186118 None:intergenic 35.0%
! TTGTAACTGGTGATGAATTC+AGG - Chr8:54186326-54186345 MsG0880045099.01.T01:intron 35.0%
!! ACATGAGTTGTTGATGGATT+AGG + Chr8:54184552-54184571 None:intergenic 35.0%
!! ACTGCAATAGCATCTAGTTT+TGG - Chr8:54188414-54188433 MsG0880045099.01.T01:intron 35.0%
!! AGCTTTTAACTCAATGCAAG+AGG - Chr8:54188049-54188068 MsG0880045099.01.T01:intron 35.0%
!! AGTTGTTGATGGATTAGGAT+CGG + Chr8:54184547-54184566 None:intergenic 35.0%
!! CTCTCATTTGCTATAATGCA+TGG - Chr8:54190094-54190113 MsG0880045099.01.T01:intron 35.0%
!! GATTTCTCTGAAGTGTTTCT+AGG + Chr8:54186057-54186076 None:intergenic 35.0%
!! TATTGTTGAGAATGGGTTGT+GGG - Chr8:54185391-54185410 MsG0880045099.01.T01:intron 35.0%
!! TCAATTTTGATGGAGATTGG+TGG - Chr8:54184727-54184746 MsG0880045099.01.T01:CDS 35.0%
!! TGATTATTTTGTTGACGGTG+AGG - Chr8:54186020-54186039 MsG0880045099.01.T01:intron 35.0%
!! TTATTGTTGAGAATGGGTTG+TGG - Chr8:54185390-54185409 MsG0880045099.01.T01:intron 35.0%
!!! CATTTTGCACTGATTTCAGT+AGG - Chr8:54188914-54188933 MsG0880045099.01.T01:intron 35.0%
!!! CTGAAGAGGATATTTTTTGG+TGG - Chr8:54189479-54189498 MsG0880045099.01.T01:intron 35.0%
AAGACCATGAAACTTCATCC+TGG - Chr8:54186168-54186187 MsG0880045099.01.T01:intron 40.0%
AAGATGCATGGTCAACTAGA+TGG - Chr8:54190374-54190393 MsG0880045099.01.T01:intron 40.0%
AAGCCAACGTTTATCTACGT+TGG - Chr8:54189945-54189964 MsG0880045099.01.T01:intron 40.0%
AGAAGTGATCCTTTGTGAAG+AGG + Chr8:54189284-54189303 None:intergenic 40.0%
AGCTCTTTCAAATGCACTCT+TGG - Chr8:54185119-54185138 MsG0880045099.01.T01:intron 40.0%
AGGAACCATCCTGTTCTTAA+AGG - Chr8:54186087-54186106 MsG0880045099.01.T01:intron 40.0%
ATGCCAACGTAGATAAACGT+TGG + Chr8:54189951-54189970 None:intergenic 40.0%
ATGTCTCGATACCTGCAATT+TGG - Chr8:54188650-54188669 MsG0880045099.01.T01:intron 40.0%
ATTGCTTCAGATCATAGCAG+AGG + Chr8:54186534-54186553 None:intergenic 40.0%
CAATGGTTTCCTCTTCACAA+AGG - Chr8:54189272-54189291 MsG0880045099.01.T01:intron 40.0%
CAGAGAAATCAAAAGGCAGA+AGG - Chr8:54186067-54186086 MsG0880045099.01.T01:intron 40.0%
CAGTAGCATTTGGAAATCCA+CGG + Chr8:54188546-54188565 None:intergenic 40.0%
CCATATAGGTATAGGCTTCT+CGG + Chr8:54187221-54187240 None:intergenic 40.0%
CGAGAAGCCTATACCTATAT+GGG - Chr8:54187219-54187238 MsG0880045099.01.T01:intron 40.0%
CGTACTCATTAAAAGCCAGA+CGG + Chr8:54185913-54185932 None:intergenic 40.0%
CTGATCATGGTCATGTTTGT+CGG + Chr8:54189792-54189811 None:intergenic 40.0%
CTGTTCATCAACTGCCAATT+TGG - Chr8:54189581-54189600 MsG0880045099.01.T01:intron 40.0%
CTTGTCGGAGATATTTATGG+TGG - Chr8:54188223-54188242 MsG0880045099.01.T01:CDS 40.0%
CTTTGTGAAGAGGAAACCAT+TGG + Chr8:54189274-54189293 None:intergenic 40.0%
GAACACAAAAGATAGCCTTC+GGG - Chr8:54189760-54189779 MsG0880045099.01.T01:intron 40.0%
GCAGAACAGTAACAAGAATG+TGG + Chr8:54186290-54186309 None:intergenic 40.0%
GCAGATGTTAGGTTAGAGAA+TGG + Chr8:54189116-54189135 None:intergenic 40.0%
GCTAGGGATAAATCTTGACA+AGG - Chr8:54186862-54186881 MsG0880045099.01.T01:intron 40.0%
GGAAGCAAGTTATGGTTTGA+AGG - Chr8:54190031-54190050 MsG0880045099.01.T01:intron 40.0%
GGAATATATGTATGCTGACC+AGG + Chr8:54186585-54186604 None:intergenic 40.0%
GGGTTCTATATAGACTCACA+GGG - Chr8:54188111-54188130 MsG0880045099.01.T01:intron 40.0%
TAACTTGGTCGGACTTTGTT+GGG + Chr8:54190339-54190358 None:intergenic 40.0%
TGGGTTCTATATAGACTCAC+AGG - Chr8:54188110-54188129 MsG0880045099.01.T01:intron 40.0%
TTAGAGAATGGTAGGAAGAG+AGG + Chr8:54189104-54189123 None:intergenic 40.0%
TTATCAGGGCAACAACAAAG+AGG - Chr8:54188192-54188211 MsG0880045099.01.T01:intron 40.0%
TTGCCTTTGATCACCCATAT+AGG + Chr8:54187235-54187254 None:intergenic 40.0%
TTGCTTCAGATCATAGCAGA+GGG + Chr8:54186533-54186552 None:intergenic 40.0%
! ACAGCGAAAGTTAACTTGGT+CGG + Chr8:54190350-54190369 None:intergenic 40.0%
! ACCTATCTGCAGAAGCATAA+GGG + Chr8:54186454-54186473 None:intergenic 40.0%
! AGGAGCAAATTTTCTTCTCG+AGG - Chr8:54186910-54186929 MsG0880045099.01.T01:CDS 40.0%
! ATCCCTAGCCTTTCTTTGAA+GGG + Chr8:54186851-54186870 None:intergenic 40.0%
! ATCTGGTGTTAGCATGATCA+AGG - Chr8:54187308-54187327 MsG0880045099.01.T01:intron 40.0%
! ATGGATTATGTTGTGGGACA+TGG - Chr8:54189619-54189638 MsG0880045099.01.T01:intron 40.0%
! CGGAGATATTTATGGTGGAA+TGG - Chr8:54188228-54188247 MsG0880045099.01.T01:CDS 40.0%
! CTATACTAGGCGTCAGTTTT+CGG - Chr8:54189058-54189077 MsG0880045099.01.T01:CDS 40.0%
! GCAAATTTTCTTCTCGAGGT+AGG - Chr8:54186914-54186933 MsG0880045099.01.T01:CDS 40.0%
! GCTTTCCTTTAAGAACAGGA+TGG + Chr8:54186095-54186114 None:intergenic 40.0%
! GTCAGTTTTCGGTATCTAAG+AGG - Chr8:54189069-54189088 MsG0880045099.01.T01:CDS 40.0%
! TATCCCTAGCCTTTCTTTGA+AGG + Chr8:54186852-54186871 None:intergenic 40.0%
! TGGTGATGAATTCAGGTAGT+CGG - Chr8:54186333-54186352 MsG0880045099.01.T01:intron 40.0%
! TTAACTTGGTCGGACTTTGT+TGG + Chr8:54190340-54190359 None:intergenic 40.0%
! TTCGCTGTTGATAAGATGCA+TGG - Chr8:54190362-54190381 MsG0880045099.01.T01:intron 40.0%
!! AATTGGCAGTTGATGAACAG+AGG + Chr8:54189581-54189600 None:intergenic 40.0%
!! AGGTATCGAGACATGCAAAA+AGG + Chr8:54188644-54188663 None:intergenic 40.0%
!! ATTGTTGAGAATGGGTTGTG+GGG - Chr8:54185392-54185411 MsG0880045099.01.T01:intron 40.0%
!! GAAATGGATTGTCTTGTTGC+AGG - Chr8:54186890-54186909 MsG0880045099.01.T01:CDS 40.0%
!! GATGGATTAGGATCGGAATT+TGG + Chr8:54184540-54184559 None:intergenic 40.0%
!! GCTATTTTCGTAAGCTCTCT+CGG - Chr8:54185044-54185063 MsG0880045099.01.T01:intron 40.0%
!! TTATTTTGTTGACGGTGAGG+CGG - Chr8:54186023-54186042 MsG0880045099.01.T01:intron 40.0%
!!! CGTCTGGCTTTTAATGAGTA+CGG - Chr8:54185911-54185930 MsG0880045099.01.T01:intron 40.0%
!!! GGGCTGAAGAGGATATTTTT+TGG - Chr8:54189476-54189495 MsG0880045099.01.T01:intron 40.0%
!!! TCAGAGGCATCCTTTTACAA+TGG - Chr8:54189511-54189530 MsG0880045099.01.T01:intron 40.0%
AAAATTCTCCACACACCTCC+AGG + Chr8:54186189-54186208 None:intergenic 45.0%
ACAGCTTAACTGCATTCCTC+CGG + Chr8:54184935-54184954 None:intergenic 45.0%
ACCATGAAACTTCATCCTGG+AGG - Chr8:54186171-54186190 MsG0880045099.01.T01:intron 45.0%
ACCCCTTCAAAGAAAGGCTA+GGG - Chr8:54186846-54186865 MsG0880045099.01.T01:intron 45.0%
ACCTCCAGGATGAAGTTTCA+TGG + Chr8:54186175-54186194 None:intergenic 45.0%
ACTCAGAAGCAAGTGTCAAG+TGG + Chr8:54190143-54190162 None:intergenic 45.0%
AGGCGAAAGCAATGTTCTTG+CGG - Chr8:54190231-54190250 MsG0880045099.01.T01:intron 45.0%
ATCATTGATCCGCTTCTCTG+TGG - Chr8:54184907-54184926 MsG0880045099.01.T01:intron 45.0%
ATGCAGACCCCTTCAAAGAA+AGG - Chr8:54186840-54186859 MsG0880045099.01.T01:intron 45.0%
CATAGCAGAGGGACTCAAAT+TGG + Chr8:54186522-54186541 None:intergenic 45.0%
CATCTTGCTCTCGATATTGG+AGG - Chr8:54184576-54184595 MsG0880045099.01.T01:three_prime_UTR 45.0%
CCGAGAAGCCTATACCTATA+TGG - Chr8:54187218-54187237 MsG0880045099.01.T01:intron 45.0%
CGAAAACTGACGCCTAGTAT+AGG + Chr8:54189060-54189079 None:intergenic 45.0%
CGACAAACATGACCATGATC+AGG - Chr8:54189790-54189809 MsG0880045099.01.T01:intron 45.0%
CGAGTTAGTGGAACGAGTAT+AGG - Chr8:54188000-54188019 MsG0880045099.01.T01:intron 45.0%
CTAAGGTTCTACCGAACGAT+TGG + Chr8:54184867-54184886 None:intergenic 45.0%
CTCAGAAGCAAGTGTCAAGT+GGG + Chr8:54190142-54190161 None:intergenic 45.0%
GAAGGATTTCTTGGAGCTGT+AGG - Chr8:54190257-54190276 MsG0880045099.01.T01:intron 45.0%
GAGTAGTGCACAGTAGCATT+TGG + Chr8:54188556-54188575 None:intergenic 45.0%
GCACATGCAGATGTAGAAGT+TGG - Chr8:54186678-54186697 MsG0880045099.01.T01:CDS 45.0%
GGAAAGTTTGAGCGAGTTAG+TGG - Chr8:54187988-54188007 MsG0880045099.01.T01:intron 45.0%
GGTTAGCAGGAAGCAAGTTA+TGG - Chr8:54190023-54190042 MsG0880045099.01.T01:intron 45.0%
GTTAGTGGAACGAGTATAGG+TGG - Chr8:54188003-54188022 MsG0880045099.01.T01:intron 45.0%
TCATTGATCCGCTTCTCTGT+GGG - Chr8:54184908-54184927 MsG0880045099.01.T01:intron 45.0%
TCCCTTATGCTTCTGCAGAT+AGG - Chr8:54186450-54186469 MsG0880045099.01.T01:intron 45.0%
TGGTAATCTTACTCGACCGA+CGG + Chr8:54185696-54185715 None:intergenic 45.0%
TTGCGGCATGAAGGATTTCT+TGG - Chr8:54190248-54190267 MsG0880045099.01.T01:intron 45.0%
TTTGTATGAACCACCACCTG+TGG + Chr8:54186819-54186838 None:intergenic 45.0%
! CACCTATCTGCAGAAGCATA+AGG + Chr8:54186455-54186474 None:intergenic 45.0%
! CTTCAGCTTTGATGAGTTGC+TGG - Chr8:54188162-54188181 MsG0880045099.01.T01:intron 45.0%
! TCCCTAGCCTTTCTTTGAAG+GGG + Chr8:54186850-54186869 None:intergenic 45.0%
! TGCAATGTAAAGTGTCCGTC+TGG - Chr8:54185895-54185914 MsG0880045099.01.T01:intron 45.0%
!! TATAGGTGGAGGCACTTTCT+GGG - Chr8:54188017-54188036 MsG0880045099.01.T01:intron 45.0%
!! TGGTGGAATGGACTATGCAA+AGG - Chr8:54188240-54188259 MsG0880045099.01.T01:CDS 45.0%
!! TTTAGCACATTCGGGTTAGC+AGG - Chr8:54190010-54190029 MsG0880045099.01.T01:intron 45.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG + Chr8:54187444-54187463 None:intergenic 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG + Chr8:54187443-54187462 None:intergenic 5.0%
!!! TTTATTACTTATTTATTTTT+AGG - Chr8:54188075-54188094 MsG0880045099.01.T01:intron 5.0%
ACCATTGTTGTGAAGGCCAC+AGG - Chr8:54186800-54186819 MsG0880045099.01.T01:intron 50.0%
ACCTGTGGCCTTCACAACAA+TGG + Chr8:54186804-54186823 None:intergenic 50.0%
AGGCTACGTCTGAACTTCTC+AGG - Chr8:54189810-54189829 MsG0880045099.01.T01:intron 50.0%
AGTCGGCAGCAAGAAAATCC+CGG - Chr8:54186350-54186369 MsG0880045099.01.T01:intron 50.0%
AGTGGAACGAGTATAGGTGG+AGG - Chr8:54188006-54188025 MsG0880045099.01.T01:intron 50.0%
ATTGTTGTGAAGGCCACAGG+TGG - Chr8:54186803-54186822 MsG0880045099.01.T01:intron 50.0%
CCTCTTCAGCCCAAAACGAA+GGG + Chr8:54189468-54189487 None:intergenic 50.0%
GACAGGTCAGTATTGTACCG+TGG - Chr8:54188526-54188545 MsG0880045099.01.T01:intron 50.0%
GACCCCTTCAAAGAAAGGCT+AGG - Chr8:54186845-54186864 MsG0880045099.01.T01:intron 50.0%
GCAATGTTCTTGCGGCATGA+AGG - Chr8:54190239-54190258 MsG0880045099.01.T01:intron 50.0%
GTTCAGACGTAGCCTGATCA+TGG + Chr8:54189805-54189824 None:intergenic 50.0%
TCCTCTTCAGCCCAAAACGA+AGG + Chr8:54189469-54189488 None:intergenic 50.0%
! AACTTCATCCTGGAGGTGTG+TGG - Chr8:54186178-54186197 MsG0880045099.01.T01:intron 50.0%
! ATGGGTTGTGGGGTTGACAT+TGG - Chr8:54185402-54185421 MsG0880045099.01.T01:intron 50.0%
!! ATAGGTGGAGGCACTTTCTG+GGG - Chr8:54188018-54188037 MsG0880045099.01.T01:intron 50.0%
!! GTATAGGTGGAGGCACTTTC+TGG - Chr8:54188016-54188035 MsG0880045099.01.T01:intron 50.0%
GTTTGTCGGTGACTTCCCGA+AGG + Chr8:54189778-54189797 None:intergenic 55.0%
!! CCCTTCGTTTTGGGCTGAAG+AGG - Chr8:54189465-54189484 MsG0880045099.01.T01:intron 55.0%
!! GGAGGCACTTTCTGGGGTTT+AGG - Chr8:54188024-54188043 MsG0880045099.01.T01:intron 55.0%
GATCCGCTTCTCTGTGGGAC+CGG - Chr8:54184913-54184932 MsG0880045099.01.T01:intron 60.0%
GTTGTGAAGGCCACAGGTGG+TGG - Chr8:54186806-54186825 MsG0880045099.01.T01:intron 60.0%
CCTCCGGTCCCACAGAGAAG+CGG + Chr8:54184919-54184938 None:intergenic 65.0%
CCGCTTCTCTGTGGGACCGG+AGG - Chr8:54184916-54184935 MsG0880045099.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 54184486 54190659 54184486 ID=MsG0880045099.01;Name=MsG0880045099.01
Chr8 mRNA 54184486 54190659 54184486 ID=MsG0880045099.01.T01;Parent=MsG0880045099.01;Name=MsG0880045099.01.T01;_AED=0.38;_eAED=0.40;_QI=24|0.88|0.9|1|1|1|10|214|425
Chr8 exon 54184486 54184925 54184486 ID=MsG0880045099.01.T01:exon:23369;Parent=MsG0880045099.01.T01
Chr8 exon 54185584 54185696 54185584 ID=MsG0880045099.01.T01:exon:23368;Parent=MsG0880045099.01.T01
Chr8 exon 54186615 54186746 54186615 ID=MsG0880045099.01.T01:exon:23367;Parent=MsG0880045099.01.T01
Chr8 exon 54186884 54187013 54186884 ID=MsG0880045099.01.T01:exon:23366;Parent=MsG0880045099.01.T01
Chr8 exon 54187075 54187169 54187075 ID=MsG0880045099.01.T01:exon:23365;Parent=MsG0880045099.01.T01
Chr8 exon 54187816 54187935 54187816 ID=MsG0880045099.01.T01:exon:23364;Parent=MsG0880045099.01.T01
Chr8 exon 54188214 54188330 54188214 ID=MsG0880045099.01.T01:exon:23363;Parent=MsG0880045099.01.T01
Chr8 exon 54188751 54188797 54188751 ID=MsG0880045099.01.T01:exon:23362;Parent=MsG0880045099.01.T01
Chr8 exon 54188953 54189162 54188953 ID=MsG0880045099.01.T01:exon:23361;Parent=MsG0880045099.01.T01
Chr8 exon 54190548 54190659 54190548 ID=MsG0880045099.01.T01:exon:23360;Parent=MsG0880045099.01.T01
Chr8 five_prime_UTR 54190636 54190659 54190636 ID=MsG0880045099.01.T01:five_prime_utr;Parent=MsG0880045099.01.T01
Chr8 CDS 54190548 54190635 54190548 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54188953 54189162 54188953 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54188751 54188797 54188751 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54188214 54188330 54188214 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54187816 54187935 54187816 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54187075 54187169 54187075 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54186884 54187013 54186884 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54186615 54186746 54186615 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54185584 54185696 54185584 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 CDS 54184700 54184925 54184700 ID=MsG0880045099.01.T01:cds;Parent=MsG0880045099.01.T01
Chr8 three_prime_UTR 54184486 54184699 54184486 ID=MsG0880045099.01.T01:three_prime_utr;Parent=MsG0880045099.01.T01
Gene Sequence

>MsG0880045099.01.T01

ATGGATCAAAGAGAGTTTGAAATTCAACCAAATTCCGATCCTAATCCATCAACAACTCATGTTTATCATCTTGCTCTCGATATTGGAGGATCTCTTAACAAATTAGTATACTTCACAAAAGATGATGATTATTTTGTTGACGGTGAGGCGGAGATATCTCCTAGAAACACTTCAGAGAAATCAAAAGGCAGAAGGAACCATCCTGTTCTTAAAGGAAAGCTCAATTTTAAGAAGTTTGAAACAAGCAAGATGAACGATTGTATAGATTTTATCAAGACCATGAAACTTCATCCTGGAGGTAGTCGGCAGCAAGAAAATCCCGGAAGTCAACCAATATCTATTAAGGCCACAGGTGGTGGTTCATACAAATATGCAGACCCCTTCAAAGAAAGGCTAGGGATAAATCTTGACAAGGAAGATGAAATGGATTGTCTTGTTGCAGGAGCAAATTTTCTTCTCGAGGTAGTCGACCGAGAAGCCTATACCTATATGGGTGATCAAAGGCAATTTGTGCAGATAGATCAAAATGATCTGTATCCATATCTTCTTGTTAATATTGGATCTGGTGTTAGCATGATCAAGGTGGAAGGAAATGGAAAGTTTGAGCGAGTTAGTGGAACGAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGAAAGCTTTTAACTCAATGCAAGAGGGTTAACATCAATGCACTTTGTGGTTCAAGCTTCAGCTTTGATGAGTTGCTGGAATTAAGTTATCAGGGCAACAACAAAGAGGTAGATATGCTTGTCGGAGATATTTATGGTGGAATGGACTATGCAAAGATTGGTCTTTCATCTACTGCAATAGCATCTAGTTTTGGAAAGGCAATGTCTGATAAAAAGGAGCGAGAAGATTACAGACCCGAAGATATGGCTCGATCTCTTCTAAGAATGATTTCAAATAATATTGGACAGATCTCTTACTTAAATGCCCTTCGTTTTGGGCTGAAGAGGATATTTTTTGGTGGATTTTTTATTCAGAGGCATCCTTTTACAATGGATACACTATCTGTTGCTGTTAATTTCTGGTCTAAAGGTGAGGCGAAAGCAATGTTCTTGCGGCATGAAGGATTTCTTGGAGCTGTAGGTGCCTTCATGAGTTCTGATAAACATGGCCTCAAAGAATTATTGGTCAAGCAAGAGGCCCAACAAAGTCCGACCAAGTTAACTTTCGCTGTTGATAAGATGCATGGTCAACTAGATGGTGAATTGTTTGGTGATGAAAGTATTGAGTGTAGTGTGTATTCGGCTTAG

Protein sequence

>MsG0880045099.01.T01

MDQREFEIQPNSDPNPSTTHVYHLALDIGGSLNKLVYFTKDDDYFVDGEAEISPRNTSEKSKGRRNHPVLKGKLNFKKFETSKMNDCIDFIKTMKLHPGGSRQQENPGSQPISIKATGGGSYKYADPFKERLGINLDKEDEMDCLVAGANFLLEVVDREAYTYMGDQRQFVQIDQNDLYPYLLVNIGSGVSMIKVEGNGKFERVSGTSIGGGTFWGLGKLLTQCKRVNINALCGSSFSFDELLELSYQGNNKEVDMLVGDIYGGMDYAKIGLSSTAIASSFGKAMSDKKEREDYRPEDMARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIQRHPFTMDTLSVAVNFWSKGEAKAMFLRHEGFLGAVGAFMSSDKHGLKELLVKQEAQQSPTKLTFAVDKMHGQLDGELFGDESIECSVYSA*