Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084890 | XP_003591897.1 | 97.886 | 615 | 13 | 0 | 1 | 615 | 1 | 615 | 0.0 | 1233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084890 | sp|Q88C93|ALGC_PSEPK | 28.629 | 496 | 282 | 15 | 98 | 590 | 18 | 444 | 4.04e-38 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084890 | G7I385 | 97.886 | 615 | 13 | 0 | 1 | 615 | 1 | 615 | 0.0 | 1233 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008340 | Msa0084890 | 0.812230 | 4.705863e-51 | -8.615850e-47 |
| Msa0046100 | Msa0084890 | 0.808827 | 2.557713e-50 | -8.615850e-47 |
| Msa0084890 | Msa0105420 | 0.818715 | 1.696018e-52 | -8.615850e-47 |
| Msa0084890 | Msa0110970 | 0.800582 | 1.346796e-48 | -8.615850e-47 |
| Msa0084890 | Msa0120330 | 0.803011 | 4.273546e-49 | -8.615850e-47 |
| Msa0084890 | Msa0124340 | 0.802550 | 5.319363e-49 | -8.615850e-47 |
| Msa0084890 | Msa0183830 | 0.800531 | 1.379925e-48 | -8.615850e-47 |
| Msa0084890 | Msa0189950 | 0.804488 | 2.109338e-49 | -8.615850e-47 |
| Msa0084890 | Msa0243710 | 0.804699 | 1.906078e-49 | -8.615850e-47 |
| Msa0084890 | Msa0280900 | 0.812044 | 5.168555e-51 | -8.615850e-47 |
| Msa0084890 | Msa0283520 | 0.804340 | 2.263684e-49 | -8.615850e-47 |
| Msa0084890 | Msa0332920 | 0.815908 | 7.264279e-52 | -8.615850e-47 |
| Msa0084890 | Msa0341050 | 0.822865 | 1.884000e-53 | -8.615850e-47 |
| Msa0084890 | Msa0414950 | -0.823205 | 1.570052e-53 | -8.615850e-47 |
| Msa0084890 | Msa0423040 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa0084890 | Msa0754720 | -0.800453 | 1.431168e-48 | -8.615850e-47 |
| Msa0084890 | Msa0760380 | 0.801598 | 8.350888e-49 | -8.615850e-47 |
| Msa0084890 | Msa1040120 | 0.811869 | 5.642987e-51 | -8.615850e-47 |
| Msa0084890 | Msa1082500 | 0.808199 | 3.482526e-50 | -8.615850e-47 |
| Msa0084890 | Msa1083210 | 0.800595 | 1.338704e-48 | -8.615850e-47 |
| Msa0084890 | Msa1154210 | 0.810692 | 1.015679e-50 | -8.615850e-47 |
| Msa0084890 | Msa1179940 | 0.803078 | 4.139376e-49 | -8.615850e-47 |
| Msa0084890 | Msa1179970 | 0.804156 | 2.473318e-49 | -8.615850e-47 |
| Msa0084890 | Msa1236100 | 0.811105 | 8.266527e-51 | -8.615850e-47 |
| Msa0084890 | Msa1264020 | 0.801511 | 8.698125e-49 | -8.615850e-47 |
| Msa0084890 | Msa1270610 | 0.819617 | 1.057281e-52 | -8.615850e-47 |
| Msa0084890 | Msa1274060 | 0.807251 | 5.536497e-50 | -8.615850e-47 |
| Msa0084890 | Msa1274280 | 0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0084890 | Msa1283990 | 0.813812 | 2.117893e-51 | -8.615850e-47 |
| Msa0084890 | Msa1371430 | 0.800520 | 1.386626e-48 | -8.615850e-47 |
| Msa0084890 | Msa1373330 | 0.800731 | 1.255856e-48 | -8.615850e-47 |
| Msa0084890 | Msa1427760 | 0.828666 | 7.919345e-55 | -8.615850e-47 |
| Msa0084890 | Msa1459180 | 0.807009 | 6.231349e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084890 | MtrunA17_Chr1g0199691 | 97.886 | 615 | 13 | 0 | 1 | 615 | 1 | 615 | 0.0 | 1233 |
| Msa0084890 | MtrunA17_Chr4g0043871 | 41.087 | 589 | 299 | 14 | 59 | 613 | 41 | 615 | 1.27e-131 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084890 | AT5G17530.3 | 73.899 | 613 | 155 | 4 | 6 | 615 | 3 | 613 | 0.0 | 911 |
| Msa0084890 | AT5G17530.4 | 71.115 | 637 | 155 | 5 | 6 | 615 | 3 | 637 | 0.0 | 897 |
| Msa0084890 | AT5G17530.1 | 75.945 | 582 | 138 | 2 | 34 | 615 | 1 | 580 | 0.0 | 894 |
| Msa0084890 | AT5G17530.7 | 75.945 | 582 | 138 | 2 | 34 | 615 | 1 | 580 | 0.0 | 894 |
| Msa0084890 | AT5G17530.2 | 75.945 | 582 | 138 | 2 | 34 | 615 | 1 | 580 | 0.0 | 894 |
| Msa0084890 | AT5G17530.6 | 75.945 | 582 | 138 | 2 | 34 | 615 | 1 | 580 | 0.0 | 894 |
| Msa0084890 | AT5G17530.5 | 79.113 | 541 | 111 | 2 | 75 | 615 | 3 | 541 | 0.0 | 871 |
| Msa0084890 | AT1G70820.2 | 44.168 | 523 | 252 | 11 | 86 | 581 | 66 | 575 | 1.38e-132 | 401 |
| Msa0084890 | AT1G70820.1 | 42.321 | 560 | 279 | 12 | 86 | 614 | 66 | 612 | 3.26e-132 | 401 |
Find 189 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATCAGATCAGAGTTTC+TGG | 0.171913 | 1_2:-64641498 | Msa0084890:intron |
| TGTCCTCAGGATTGGGGATA+TGG | 0.207034 | 1_2:+64644194 | None:intergenic |
| CTTTAAGATCTGGATGGTTT+TGG | 0.233736 | 1_2:+64642248 | None:intergenic |
| TTCACCAATGCTGGTGGTCT+TGG | 0.260488 | 1_2:-64645384 | Msa0084890:CDS |
| GCTGTCTTGTCCTCAGGATT+GGG | 0.269069 | 1_2:+64644187 | None:intergenic |
| GGAAGCGAGTTGCGCATATA+AGG | 0.282315 | 1_2:+64648102 | None:intergenic |
| CTTGCTTCCGCTAGAGCTTC+TGG | 0.284615 | 1_2:-64642358 | Msa0084890:CDS |
| AATTTAGACCTGTAGCAATT+TGG | 0.288147 | 1_2:+64647118 | None:intergenic |
| AGACGACACTACTCTCAAAA+TGG | 0.292308 | 1_2:+64641015 | None:intergenic |
| AGCGGGTTGAGGTGAATTAA+AGG | 0.298863 | 1_2:-64641155 | Msa0084890:three_prime_UTR |
| TGCTGTCTTGTCCTCAGGAT+TGG | 0.301486 | 1_2:+64644186 | None:intergenic |
| AACTCGCTTCCCTCTCCTTC+AGG | 0.309258 | 1_2:-64648090 | Msa0084890:CDS |
| CAAAACCATCCAGATCTTAA+AGG | 0.316228 | 1_2:-64642247 | Msa0084890:CDS |
| CAGATCAGAGTTTCTGGTTA+TGG | 0.333588 | 1_2:-64641492 | Msa0084890:CDS |
| GCGATTTCTCGAGGTCTTGC+TGG | 0.334136 | 1_2:-64646783 | Msa0084890:CDS |
| TCCCTGCATCAACAACTATA+TGG | 0.338345 | 1_2:+64644726 | None:intergenic |
| TCTTTGTATAATGCAGAAAT+AGG | 0.339941 | 1_2:+64641198 | None:intergenic |
| CAAGATCAGCTTTGTTATCA+AGG | 0.346861 | 1_2:+64644140 | None:intergenic |
| TTTCTATTGGCCACGATTCC+CGG | 0.348900 | 1_2:-64647148 | Msa0084890:CDS |
| TTGCACAAAGAATCATCTAT+TGG | 0.350293 | 1_2:-64640884 | Msa0084890:three_prime_UTR |
| GAATCGTTTGATTTCCTTGA+TGG | 0.353178 | 1_2:-64643976 | Msa0084890:CDS |
| TTCATTGCTGTCTTGTCCTC+AGG | 0.353737 | 1_2:+64644181 | None:intergenic |
| AACGATTCCGGTTGAATTCA+CGG | 0.354655 | 1_2:+64643991 | None:intergenic |
| GCTCCTATTGCTTCAGCAAC+AGG | 0.355574 | 1_2:+64647230 | None:intergenic |
| CAGTGGGCATGGAGCTCTTA+AGG | 0.356191 | 1_2:-64642811 | Msa0084890:CDS |
| CATCTGCCTTTCAACAGAAA+TGG | 0.370069 | 1_2:-64645417 | Msa0084890:CDS |
| GCAGCTGTAAAGGAGTTTGC+AGG | 0.375282 | 1_2:-64641276 | Msa0084890:CDS |
| CTTGATAACAAAGCTGATCT+TGG | 0.375462 | 1_2:-64644139 | Msa0084890:CDS |
| TATTGCTGACAGAACTCTAA+TGG | 0.379223 | 1_2:-64642861 | Msa0084890:intron |
| TCACCAATGCTGGTGGTCTT+GGG | 0.385644 | 1_2:-64645383 | Msa0084890:CDS |
| ACCCATAGTGGACAACTTCT+AGG | 0.386131 | 1_2:+64646754 | None:intergenic |
| GGCCTAGAAGTTGTCCACTA+TGG | 0.388207 | 1_2:-64646756 | Msa0084890:CDS |
| AACTTGAAGGCTCGGCTGAC+AGG | 0.390272 | 1_2:-64640921 | Msa0084890:three_prime_UTR |
| CAAAGGTGCTGGAACCTCTT+GGG | 0.392597 | 1_2:-64644344 | Msa0084890:CDS |
| ATTGCTGACAGAACTCTAAT+GGG | 0.393588 | 1_2:-64642860 | Msa0084890:intron |
| TCAGGATTGGGGATATGGTT+TGG | 0.394993 | 1_2:+64644199 | None:intergenic |
| GTAGCAATTTGGCTGATATC+CGG | 0.395487 | 1_2:+64647129 | None:intergenic |
| AAGGCTCGGCTGACAGGATC+TGG | 0.404522 | 1_2:-64640915 | Msa0084890:three_prime_UTR |
| TTCCATATAGTTGTTGATGC+AGG | 0.410833 | 1_2:-64644728 | Msa0084890:CDS |
| CACAGGTAACAATCCTTTGC+AGG | 0.411734 | 1_2:+64648932 | None:intergenic |
| ATATACGCGTTTGAACTTGA+AGG | 0.415977 | 1_2:-64640934 | Msa0084890:three_prime_UTR |
| CAGCATTTGAGAGTTTCTAT+TGG | 0.418225 | 1_2:-64647161 | Msa0084890:CDS |
| GAAGCGAGTTGCGCATATAA+GGG | 0.421286 | 1_2:+64648103 | None:intergenic |
| CCTCTTGGGGCAATAACTTC+TGG | 0.422876 | 1_2:-64644330 | Msa0084890:CDS |
| TCAAGGAAATCAAACGATTC+CGG | 0.423396 | 1_2:+64643979 | None:intergenic |
| TCTTGACGGTGTTGAGGGAG+AGG | 0.426602 | 1_2:-64647270 | Msa0084890:CDS |
| ATGAGTGAGATCATTTGTTA+AGG | 0.433355 | 1_2:-64641083 | Msa0084890:three_prime_UTR |
| GAACCTGTTGCTGAAGCAAT+AGG | 0.435275 | 1_2:-64647233 | Msa0084890:CDS |
| TATCATTCTGCCTAGCATCC+TGG | 0.436883 | 1_2:-64643853 | Msa0084890:intron |
| TGATCCGACAAATTTGTTCA+AGG | 0.437587 | 1_2:+64641239 | None:intergenic |
| TGCTTTCGCCGGATGGTTAG+TGG | 0.437675 | 1_2:-64647207 | Msa0084890:CDS |
| CTCAGTTCTGCAGCAAAAGC+TGG | 0.439351 | 1_2:+64642283 | None:intergenic |
| CCGGGAAGTAAAATCGTTCA+AGG | 0.440436 | 1_2:+64648014 | None:intergenic |
| GACGGGTCTATTATGATAAC+AGG | 0.441890 | 1_2:-64645684 | Msa0084890:intron |
| AAGTCAGTCATGTCAAGATA+TGG | 0.443959 | 1_2:+64647561 | None:intergenic |
| GAGCTCTTAAGGAAAACAAT+TGG | 0.444681 | 1_2:-64642800 | Msa0084890:CDS |
| CTGCAGCAAAAGCTGGCTCC+TGG | 0.447472 | 1_2:+64642290 | None:intergenic |
| GCAAAGGTGCTGGAACCTCT+TGG | 0.455133 | 1_2:-64644345 | Msa0084890:CDS |
| TCTGTGACAATAGTTGTTCC+AGG | 0.455726 | 1_2:+64643835 | None:intergenic |
| CGCGTTTGAACTTGAAGGCT+CGG | 0.455727 | 1_2:-64640929 | Msa0084890:three_prime_UTR |
| GCTTACCCTCCTTTAAGATC+TGG | 0.459425 | 1_2:+64642238 | None:intergenic |
| GCCTAGAAGTTGTCCACTAT+GGG | 0.459618 | 1_2:-64646755 | Msa0084890:intron |
| AACGAAGATGCTGTAAAGCT+TGG | 0.462671 | 1_2:-64641312 | Msa0084890:CDS |
| TCTAAGATATCTTTAATGTC+AGG | 0.464357 | 1_2:+64645357 | None:intergenic |
| CTTGACGGTGTTGAGGGAGA+GGG | 0.465444 | 1_2:-64647269 | Msa0084890:CDS |
| AGAAACTGTGCTGAAACATT+TGG | 0.467221 | 1_2:-64642115 | Msa0084890:CDS |
| GACTCAACTGTCTATTCTGT+TGG | 0.467339 | 1_2:+64648142 | None:intergenic |
| GGAAGGTTAGAGAAGAAGTT+AGG | 0.467384 | 1_2:-64648900 | Msa0084890:five_prime_UTR |
| GACGACACTACTCTCAAAAT+GGG | 0.470424 | 1_2:+64641016 | None:intergenic |
| TTCTAAAGCTTCAAAACGGC+AGG | 0.471232 | 1_2:-64647539 | Msa0084890:intron |
| ATCATAATAGACCCGTCAAC+AGG | 0.471820 | 1_2:+64645690 | None:intergenic |
| TGTTGTGCTTGCAGCTGTAA+AGG | 0.473841 | 1_2:-64641286 | Msa0084890:CDS |
| TTGAATCCATTTCTGTTGAA+AGG | 0.474147 | 1_2:+64645411 | None:intergenic |
| TAATGGGGAGGAGTCTCATC+TGG | 0.475278 | 1_2:-64642844 | Msa0084890:CDS |
| AAAGCAGTTCGCAAAGCAGC+TGG | 0.477285 | 1_2:-64645216 | Msa0084890:CDS |
| ACTCGCTTCCCTCTCCTTCA+GGG | 0.477507 | 1_2:-64648089 | Msa0084890:CDS |
| AACATAGCAGCAGCGGGTTG+AGG | 0.478024 | 1_2:-64641166 | Msa0084890:three_prime_UTR |
| CTCCTTCAGGGAAGTTGACA+TGG | 0.480523 | 1_2:-64648077 | Msa0084890:CDS |
| TCTCGAGGTCTTGCTGGTGC+CGG | 0.481744 | 1_2:-64646777 | Msa0084890:CDS |
| CTCTGATCCAAACCTGCAAA+AGG | 0.483664 | 1_2:-64642079 | Msa0084890:CDS |
| ATCAGAGTTTCTGGTTATGG+TGG | 0.483950 | 1_2:-64641489 | Msa0084890:CDS |
| CTTAAGAGCTCCATGCCCAC+TGG | 0.486466 | 1_2:+64642812 | None:intergenic |
| CCACTGGCCGTGAATTCAAC+CGG | 0.486623 | 1_2:-64643998 | Msa0084890:CDS |
| AACGTTGATGTTCTTTGACT+TGG | 0.487058 | 1_2:-64640971 | Msa0084890:three_prime_UTR |
| GATTGATGAAGCTATTCGTT+TGG | 0.490091 | 1_2:-64643570 | Msa0084890:intron |
| GAGTTTCTGGTTATGGTGGG+TGG | 0.496649 | 1_2:-64641485 | Msa0084890:CDS |
| CATGGCAGAGAATATTTCTC+CGG | 0.497746 | 1_2:+64647995 | None:intergenic |
| AGAGCTTCTGGTGTGGGTGG+AGG | 0.503316 | 1_2:-64642346 | Msa0084890:CDS |
| TCCGCTAGAGCTTCTGGTGT+GGG | 0.505271 | 1_2:-64642352 | Msa0084890:CDS |
| TTTGTTATCAAGGACTGCCT+TGG | 0.505639 | 1_2:+64644150 | None:intergenic |
| TAGCAATTTGGCTGATATCC+GGG | 0.509032 | 1_2:+64647130 | None:intergenic |
| GCAATTGAAACCAGTGGGCA+TGG | 0.513594 | 1_2:-64642822 | Msa0084890:CDS |
| AAGAACAATAGCTGCCATCA+AGG | 0.513661 | 1_2:+64643962 | None:intergenic |
| CTGTCTTGTCCTCAGGATTG+GGG | 0.514189 | 1_2:+64644188 | None:intergenic |
| GCAATAGGAGCTGCTTTCGC+CGG | 0.514813 | 1_2:-64647218 | Msa0084890:CDS |
| TCAGCCTTGAACAAATTTGT+CGG | 0.515210 | 1_2:-64641243 | Msa0084890:CDS |
| TGAATAATAGGCAAAGGTGC+TGG | 0.516726 | 1_2:-64644355 | Msa0084890:intron |
| AGTAGTGTCGTCTCTATTTG+TGG | 0.517380 | 1_2:-64641005 | Msa0084890:three_prime_UTR |
| TTTCATCACATCCACATGGC+AGG | 0.519002 | 1_2:-64648834 | Msa0084890:intron |
| TTGACGGTGTTGAGGGAGAG+GGG | 0.519853 | 1_2:-64647268 | Msa0084890:CDS |
| TCCATATAGTTGTTGATGCA+GGG | 0.521303 | 1_2:-64644727 | Msa0084890:CDS |
| ACATTTATCGAAAAGAAACT+TGG | 0.521337 | 1_2:-64643787 | Msa0084890:intron |
| GTGGCTCTTGACGGTGTTGA+GGG | 0.523598 | 1_2:-64647275 | Msa0084890:CDS |
| GACTTTCTAAAGCTTCAAAA+CGG | 0.526949 | 1_2:-64647543 | Msa0084890:CDS |
| ATAGTTGTTGATGCAGGGAA+TGG | 0.529461 | 1_2:-64644722 | Msa0084890:CDS |
| ACCCTCCTTTAAGATCTGGA+TGG | 0.533653 | 1_2:+64642242 | None:intergenic |
| ATACGTGGTGTGGCTCTTGA+CGG | 0.533900 | 1_2:-64647284 | Msa0084890:CDS |
| CCGGTTGAATTCACGGCCAG+TGG | 0.534089 | 1_2:+64643998 | None:intergenic |
| GATATCAGCCAAATTGCTAC+AGG | 0.537057 | 1_2:-64647126 | Msa0084890:intron |
| TAGGAGCTGCTTTCGCCGGA+TGG | 0.537093 | 1_2:-64647214 | Msa0084890:CDS |
| AAAGGTGCTGGAACCTCTTG+GGG | 0.537634 | 1_2:-64644343 | Msa0084890:CDS |
| TCTCAGGTGGCAAACATCAT+CGG | 0.537657 | 1_2:-64643616 | Msa0084890:intron |
| TAAGAGGAAGTACAGGATCA+TGG | 0.537973 | 1_2:+64641442 | None:intergenic |
| TCAGGGAAGTTGACATGGAC+TGG | 0.538210 | 1_2:-64648072 | Msa0084890:CDS |
| TCAGAGTTTCTGGTTATGGT+GGG | 0.539366 | 1_2:-64641488 | Msa0084890:CDS |
| TGTACTTCCTCTTAACATTG+AGG | 0.540776 | 1_2:-64641433 | Msa0084890:intron |
| CTTCCCAAGACCACCAGCAT+TGG | 0.546188 | 1_2:+64645380 | None:intergenic |
| AACCTTCCACACTAAATCAC+AGG | 0.546765 | 1_2:+64648915 | None:intergenic |
| TATTTCTGCATTATACAAAG+AGG | 0.547660 | 1_2:-64641196 | Msa0084890:three_prime_UTR |
| TAAATGTCACCCACCCATAG+TGG | 0.548370 | 1_2:+64646742 | None:intergenic |
| TCTTTGATACTGATGTGGAC+AGG | 0.549774 | 1_2:-64644111 | Msa0084890:intron |
| TGATGATGGTGCATACCTAA+TGG | 0.551834 | 1_2:-64642775 | Msa0084890:intron |
| TATATCCGAGGTTTCTGAGA+TGG | 0.553950 | 1_2:-64641054 | Msa0084890:three_prime_UTR |
| CATGGAGTGATAATCTAAGA+AGG | 0.555775 | 1_2:+64641460 | None:intergenic |
| CGCAAAGCAGCTGGAAACAT+AGG | 0.556476 | 1_2:-64645207 | Msa0084890:intron |
| TGTGGCTCTTGACGGTGTTG+AGG | 0.559242 | 1_2:-64647276 | Msa0084890:CDS |
| TCTATTAACATAGCAGCAGC+GGG | 0.561128 | 1_2:-64641172 | Msa0084890:three_prime_UTR |
| AGCAATGAAAGCTATAACCA+AGG | 0.561872 | 1_2:-64644167 | Msa0084890:CDS |
| TCTGCCGCTGTGGATTCCAC+TGG | 0.563506 | 1_2:-64644014 | Msa0084890:CDS |
| TTCTATTAACATAGCAGCAG+CGG | 0.563805 | 1_2:-64641173 | Msa0084890:three_prime_UTR |
| CGGAGAAATATTCTCTGCCA+TGG | 0.564311 | 1_2:-64647994 | Msa0084890:intron |
| ATCTGGCAATTGAAACCAGT+GGG | 0.566894 | 1_2:-64642827 | Msa0084890:CDS |
| TCAATGTTAAGAGGAAGTAC+AGG | 0.567339 | 1_2:+64641435 | None:intergenic |
| TGGTCTAATAGAAGGACTCC+AGG | 0.567462 | 1_2:-64642308 | Msa0084890:CDS |
| TACCTGTGATTTAGTGTGGA+AGG | 0.568393 | 1_2:-64648917 | Msa0084890:five_prime_UTR |
| CATACCCCTTCGTAATTCAA+AGG | 0.568450 | 1_2:+64642054 | None:intergenic |
| GAAAACAATTGGCTTGATGA+TGG | 0.569027 | 1_2:-64642789 | Msa0084890:CDS |
| TTCTTCTAGATCTGCCGCTG+TGG | 0.569134 | 1_2:-64644024 | Msa0084890:intron |
| TGTCACAGATAGTGTGACTT+CGG | 0.577305 | 1_2:-64643821 | Msa0084890:CDS |
| AGAATAGACAGTTGAGTCGA+AGG | 0.577680 | 1_2:-64648137 | Msa0084890:CDS |
| AGGCTCCTTTGAATTACGAA+GGG | 0.579763 | 1_2:-64642059 | Msa0084890:CDS |
| AACCATCCAGATCTTAAAGG+AGG | 0.579963 | 1_2:-64642244 | Msa0084890:CDS |
| TTCCGCTAGAGCTTCTGGTG+TGG | 0.584850 | 1_2:-64642353 | Msa0084890:CDS |
| GTCAACTTCCCTGAAGGAGA+GGG | 0.588017 | 1_2:+64648081 | None:intergenic |
| AATTATCTTTGATACTGATG+TGG | 0.589127 | 1_2:-64644116 | Msa0084890:CDS |
| TGACAATGTGCGCAATTGCA+TGG | 0.590504 | 1_2:+64648041 | None:intergenic |
| ATGGCAGAGAATATTTCTCC+GGG | 0.590725 | 1_2:+64647996 | None:intergenic |
| ACAGATAGTGTGACTTCGGA+TGG | 0.590977 | 1_2:-64643817 | Msa0084890:CDS |
| GTCCATGTCAACTTCCCTGA+AGG | 0.592079 | 1_2:+64648075 | None:intergenic |
| GTTGCAGAGCGGAGAAACTG+AGG | 0.592365 | 1_2:+64648861 | None:intergenic |
| TGACGGTGTTGAGGGAGAGG+GGG | 0.593095 | 1_2:-64647267 | Msa0084890:CDS |
| GCTAGAGCTTCTGGTGTGGG+TGG | 0.593560 | 1_2:-64642349 | Msa0084890:CDS |
| CGGGAAGTAAAATCGTTCAA+GGG | 0.597552 | 1_2:+64648015 | None:intergenic |
| GAATAGACAGTTGAGTCGAA+GGG | 0.597897 | 1_2:-64648136 | Msa0084890:CDS |
| AGTGTGCTATTGAACATAGC+TGG | 0.600868 | 1_2:+64645738 | None:intergenic |
| ATAGTGGACAACTTCTAGGC+CGG | 0.601912 | 1_2:+64646758 | None:intergenic |
| GTTGATGCAGGGAATGGAGC+AGG | 0.602757 | 1_2:-64644716 | Msa0084890:CDS |
| ACCATCCAGATCTTAAAGGA+GGG | 0.605031 | 1_2:-64642243 | Msa0084890:intron |
| TTTCAGAATGCGATTTCTCG+AGG | 0.606158 | 1_2:-64646792 | Msa0084890:intron |
| TGTCAACTTCCCTGAAGGAG+AGG | 0.608366 | 1_2:+64648080 | None:intergenic |
| AGGAACTCGTGATATTGGTA+GGG | 0.610155 | 1_2:-64640778 | Msa0084890:intron |
| TTGTTACCTGTGATTTAGTG+TGG | 0.610270 | 1_2:-64648921 | Msa0084890:five_prime_UTR |
| AAGGCTCCTTTGAATTACGA+AGG | 0.610723 | 1_2:-64642060 | Msa0084890:CDS |
| ACCCACACCAGAAGCTCTAG+CGG | 0.612694 | 1_2:+64642351 | None:intergenic |
| AAGCGAGTTGCGCATATAAG+GGG | 0.616061 | 1_2:+64648104 | None:intergenic |
| ATTCTGTTGGCAGCATTGTG+AGG | 0.620771 | 1_2:+64648155 | None:intergenic |
| CCCACAGAGAAACCATTGGA+GGG | 0.622390 | 1_2:-64644752 | Msa0084890:intron |
| CCAGAAGTTATTGCCCCAAG+AGG | 0.622873 | 1_2:+64644330 | None:intergenic |
| GCCCACAGAGAAACCATTGG+AGG | 0.624310 | 1_2:-64644753 | Msa0084890:intron |
| TCTGCCCACAGAGAAACCAT+TGG | 0.625485 | 1_2:-64644756 | Msa0084890:intron |
| ACTATATGGAAACCCTCCAA+TGG | 0.625727 | 1_2:+64644740 | None:intergenic |
| AAATTCCATCTCAGAAACCT+CGG | 0.629545 | 1_2:+64641049 | None:intergenic |
| GGCTCCTTTGAATTACGAAG+GGG | 0.634144 | 1_2:-64642058 | Msa0084890:intron |
| AAACATCATCGGTTCAAGAG+AGG | 0.635786 | 1_2:-64643605 | Msa0084890:CDS |
| CTCACTCATGAACAGCCACA+TGG | 0.636373 | 1_2:+64641097 | None:intergenic |
| TGGCTGATATCCGGGAATCG+TGG | 0.644726 | 1_2:+64647138 | None:intergenic |
| TTAAGGATTAGATATATCCG+AGG | 0.656206 | 1_2:-64641066 | Msa0084890:three_prime_UTR |
| ACATAGTGACATACGTGGTG+TGG | 0.659630 | 1_2:-64647294 | Msa0084890:intron |
| CTGACAGAACTCTAATGGGG+AGG | 0.664819 | 1_2:-64642856 | Msa0084890:intron |
| CATCTGGCAATTGAAACCAG+TGG | 0.674266 | 1_2:-64642828 | Msa0084890:CDS |
| CTTCAGCAACAGGTTCAGTG+AGG | 0.677929 | 1_2:+64647240 | None:intergenic |
| GTTCAATAGCACACTCACAA+AGG | 0.678351 | 1_2:-64645730 | Msa0084890:CDS |
| GATGCAGGGAATGGAGCAGG+TGG | 0.686283 | 1_2:-64644713 | Msa0084890:CDS |
| AAACCATATCCCCAATCCTG+AGG | 0.688417 | 1_2:-64644197 | Msa0084890:CDS |
| TTGCTGACAGAACTCTAATG+GGG | 0.695832 | 1_2:-64642859 | Msa0084890:intron |
| TTAATTTCATCACATCCACA+TGG | 0.723895 | 1_2:-64648838 | Msa0084890:exon |
| AATTTACATAGTGACATACG+TGG | 0.744830 | 1_2:-64647299 | Msa0084890:intron |
| ACGGCCAGTGGAATCCACAG+CGG | 0.746892 | 1_2:+64644010 | None:intergenic |
| GATGAAATTAAGTTGCAGAG+CGG | 0.771311 | 1_2:+64648850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCAAATTCAAATATTAA+GGG | + | chr1_2:64641233-64641252 | None:intergenic | 10.0% |
| !! | AAATTCAAATTCAAATATTA+AGG | + | chr1_2:64641234-64641253 | None:intergenic | 10.0% |
| !! | TATATATATATTATCTACAA+CGG | - | chr1_2:64641897-64641916 | Msa0084890:intron | 10.0% |
| !! | AATGATTATGAATAAAATAA+TGG | + | chr1_2:64643006-64643025 | None:intergenic | 10.0% |
| !! | AATTAATAAAGAGATTAATT+TGG | + | chr1_2:64647002-64647021 | None:intergenic | 10.0% |
| !!! | AATTTTAGTAGAGTTTAAAA+GGG | - | chr1_2:64641249-64641268 | Msa0084890:CDS | 15.0% |
| !!! | TTGATTTATTCTTTATCTTT+TGG | - | chr1_2:64642041-64642060 | Msa0084890:intron | 15.0% |
| !!! | TTAACATTTTTGTTTTCTAA+TGG | - | chr1_2:64642070-64642089 | Msa0084890:CDS | 15.0% |
| !! | TAATGTATTCTAAATCTAAA+TGG | + | chr1_2:64642340-64642359 | None:intergenic | 15.0% |
| !!! | AAGAACCTTTAAAATATTAA+AGG | - | chr1_2:64642642-64642661 | Msa0084890:intron | 15.0% |
| !! | TTATTCATAATCATTATTTG+CGG | - | chr1_2:64643011-64643030 | Msa0084890:intron | 15.0% |
| !! | ATTCCAAAAAAAGTTAAATA+GGG | + | chr1_2:64643643-64643662 | None:intergenic | 15.0% |
| !! | AATTCCAAAAAAAGTTAAAT+AGG | + | chr1_2:64643644-64643663 | None:intergenic | 15.0% |
| !!! | TTTAACTTTTTTTGGAATTT+TGG | - | chr1_2:64643645-64643664 | Msa0084890:intron | 15.0% |
| !! | CAAAAAAAAAGAGTAAAATA+GGG | - | chr1_2:64643825-64643844 | Msa0084890:CDS | 15.0% |
| !! | AAAAAAAAAGAGTAAAATAG+GGG | - | chr1_2:64643826-64643845 | Msa0084890:CDS | 15.0% |
| !!! | AATATCCGAATTTTAAAATA+AGG | - | chr1_2:64643854-64643873 | Msa0084890:intron | 15.0% |
| !!! | ATATCCGAATTTTAAAATAA+GGG | - | chr1_2:64643855-64643874 | Msa0084890:intron | 15.0% |
| !! | AAATAGTTAGAATAATAACA+AGG | + | chr1_2:64643901-64643920 | None:intergenic | 15.0% |
| !! | TATTATTCTAACTATTTCAA+TGG | - | chr1_2:64643904-64643923 | Msa0084890:intron | 15.0% |
| !! | ATAAAAAAACATAAGCAAAT+GGG | + | chr1_2:64644621-64644640 | None:intergenic | 15.0% |
| !! | AATAAAAAAACATAAGCAAA+TGG | + | chr1_2:64644622-64644641 | None:intergenic | 15.0% |
| !! | TAAATAAAGTAGATGAATAA+TGG | - | chr1_2:64644834-64644853 | Msa0084890:intron | 15.0% |
| !! | ATCAGAAAAAAAATATATAC+TGG | - | chr1_2:64645146-64645165 | Msa0084890:intron | 15.0% |
| !!! | TATAGAGAGTATAATTAATT+GGG | - | chr1_2:64645286-64645305 | Msa0084890:CDS | 15.0% |
| !! | ATATGCTAAATATTTAACTA+TGG | - | chr1_2:64646821-64646840 | Msa0084890:intron | 15.0% |
| !! | TAAACAAAAAAAATCATTCA+GGG | + | chr1_2:64647111-64647130 | None:intergenic | 15.0% |
| !! | GACAAGAAAAAAAATAAAAT+TGG | - | chr1_2:64648869-64648888 | Msa0084890:five_prime_UTR | 15.0% |
| !! | ATTGAGAAATTGAATGAAAT+GGG | + | chr1_2:64640921-64640940 | None:intergenic | 20.0% |
| !! | AATTGAGAAATTGAATGAAA+TGG | + | chr1_2:64640922-64640941 | None:intergenic | 20.0% |
| !!! | GAATTTTAGTAGAGTTTAAA+AGG | - | chr1_2:64641248-64641267 | Msa0084890:CDS | 20.0% |
| !!! | ATTTTGGAATTGAAAGTATT+GGG | - | chr1_2:64641277-64641296 | Msa0084890:CDS | 20.0% |
| !!! | CAAAGCCTTTAATATTTTAA+AGG | + | chr1_2:64642650-64642669 | None:intergenic | 20.0% |
| !!! | GATTGTGTCAAATTTTAAAA+TGG | - | chr1_2:64642672-64642691 | Msa0084890:intron | 20.0% |
| !! | TAGGATATAATATGTATTCT+AGG | - | chr1_2:64643118-64643137 | Msa0084890:intron | 20.0% |
| !!! | ATTAAACTTGCATAACATTT+TGG | - | chr1_2:64643163-64643182 | Msa0084890:intron | 20.0% |
| !!! | GGTGTATTGAAAATATTTTT+TGG | + | chr1_2:64643396-64643415 | None:intergenic | 20.0% |
| !! | CGACAATATCAAAATTTATT+AGG | - | chr1_2:64643485-64643504 | Msa0084890:intron | 20.0% |
| !! | GCAAAAAAAAAGAGTAAAAT+AGG | - | chr1_2:64643824-64643843 | Msa0084890:CDS | 20.0% |
| !! | AAAAAAAAGAGTAAAATAGG+GGG | - | chr1_2:64643827-64643846 | Msa0084890:CDS | 20.0% |
| !!! | TATCCGAATTTTAAAATAAG+GGG | - | chr1_2:64643856-64643875 | Msa0084890:intron | 20.0% |
| !!! | TTTTCATAGAAAGAAATGTT+CGG | + | chr1_2:64644093-64644112 | None:intergenic | 20.0% |
| !! | TATTACAGTTTCAGTAAAAA+GGG | + | chr1_2:64644118-64644137 | None:intergenic | 20.0% |
| !!! | TTTGAAAAATTCTGAGATAA+TGG | - | chr1_2:64644416-64644435 | Msa0084890:intron | 20.0% |
| !!! | CTATAGAGAGTATAATTAAT+TGG | - | chr1_2:64645285-64645304 | Msa0084890:CDS | 20.0% |
| !! | TGGTATGGATAAATTTAAAT+TGG | - | chr1_2:64645944-64645963 | Msa0084890:intron | 20.0% |
| !! | AAATTTAATCAAAATGCACA+AGG | + | chr1_2:64646191-64646210 | None:intergenic | 20.0% |
| !! | AGAATTTATCGTAGTAATAT+TGG | - | chr1_2:64646961-64646980 | Msa0084890:intron | 20.0% |
| !! | GAATTTATCGTAGTAATATT+GGG | - | chr1_2:64646962-64646981 | Msa0084890:intron | 20.0% |
| !! | GTAAACAAAAAAAATCATTC+AGG | + | chr1_2:64647112-64647131 | None:intergenic | 20.0% |
| !! | AATCAAAGAATTAGATCATT+AGG | - | chr1_2:64647254-64647273 | Msa0084890:CDS | 20.0% |
| !!! | TCATTGATTGAATTATACTA+CGG | - | chr1_2:64647738-64647757 | Msa0084890:intron | 20.0% |
| !! | TTAATTGAATTTGTAGTGTT+TGG | - | chr1_2:64647838-64647857 | Msa0084890:intron | 20.0% |
| !! | AATTTCTAATATGCAATGAT+TGG | - | chr1_2:64648130-64648149 | Msa0084890:CDS | 20.0% |
| !!! | TGTATTCTTTGTAAACTTTT+TGG | - | chr1_2:64648963-64648982 | Msa0084890:five_prime_UTR | 20.0% |
| !!! | GTATTCTTTGTAAACTTTTT+GGG | - | chr1_2:64648964-64648983 | Msa0084890:five_prime_UTR | 20.0% |
| ! | AAATTGAATGAAATGGGAAA+TGG | + | chr1_2:64640915-64640934 | None:intergenic | 25.0% |
| !!! | GTTTAAAAGGGTATTGATTT+TGG | - | chr1_2:64641261-64641280 | Msa0084890:CDS | 25.0% |
| !!! | GATTTTGGAATTGAAAGTAT+TGG | - | chr1_2:64641276-64641295 | Msa0084890:CDS | 25.0% |
| ! | ATCGATATCTCTCAAATTTA+CGG | + | chr1_2:64641412-64641431 | None:intergenic | 25.0% |
| ! | TTACACCTTTATTAGATTTC+TGG | + | chr1_2:64641489-64641508 | None:intergenic | 25.0% |
| !! | ATTGTGAGGTAAAAACATTT+TGG | + | chr1_2:64641545-64641564 | None:intergenic | 25.0% |
| ! | ATTCATATAAATAGCTTGGA+AGG | + | chr1_2:64641962-64641981 | None:intergenic | 25.0% |
| ! | ACACATTCATATAAATAGCT+TGG | + | chr1_2:64641966-64641985 | None:intergenic | 25.0% |
| !! | AATGTATCGGTATTTGTATA+AGG | - | chr1_2:64641989-64642008 | Msa0084890:intron | 25.0% |
| !! | ATGTATCGGTATTTGTATAA+GGG | - | chr1_2:64641990-64642009 | Msa0084890:intron | 25.0% |
| ! | CAATTCTGTCAAAAATCAAA+AGG | + | chr1_2:64642024-64642043 | None:intergenic | 25.0% |
| ! | TCAGAAAATGTGCATTTAAT+TGG | + | chr1_2:64642718-64642737 | None:intergenic | 25.0% |
| !! | ATTTTCTGATACATGAAAGA+TGG | - | chr1_2:64642729-64642748 | Msa0084890:intron | 25.0% |
| !!! | ATTCACTGATACTGATTTTT+AGG | - | chr1_2:64643099-64643118 | Msa0084890:intron | 25.0% |
| !! | TCTGTTTTCTATAAATACAG+AGG | - | chr1_2:64643350-64643369 | Msa0084890:intron | 25.0% |
| ! | ACATAACCATTCAATAAGTT+CGG | - | chr1_2:64643518-64643537 | Msa0084890:intron | 25.0% |
| ! | TTTATCAAAACTGAAACACA+TGG | + | chr1_2:64643565-64643584 | None:intergenic | 25.0% |
| !!! | ACTCCCTATTTAACTTTTTT+TGG | - | chr1_2:64643637-64643656 | Msa0084890:intron | 25.0% |
| !!! | CTCTTTTTTTTTGCTGAATT+TGG | + | chr1_2:64643818-64643837 | None:intergenic | 25.0% |
| !!! | ATCCGAATTTTAAAATAAGG+GGG | - | chr1_2:64643857-64643876 | Msa0084890:intron | 25.0% |
| ! | ATTATGATAACAGGTACATT+AGG | - | chr1_2:64644036-64644055 | Msa0084890:intron | 25.0% |
| ! | CTATTACAGTTTCAGTAAAA+AGG | + | chr1_2:64644119-64644138 | None:intergenic | 25.0% |
| ! | AACAACATGCAATATGAAAA+TGG | + | chr1_2:64644201-64644220 | None:intergenic | 25.0% |
| !! | TCTAAGATATCTTTAATGTC+AGG | + | chr1_2:64644357-64644376 | None:intergenic | 25.0% |
| ! | ATGACTTTGCTGAAATAAAA+TGG | - | chr1_2:64644528-64644547 | Msa0084890:intron | 25.0% |
| ! | ACAAAAAGCAATAAATGCTA+AGG | + | chr1_2:64645054-64645073 | None:intergenic | 25.0% |
| ! | AATATATACTGGTGTTTCTT+TGG | - | chr1_2:64645157-64645176 | Msa0084890:intron | 25.0% |
| ! | ATATATACTGGTGTTTCTTT+GGG | - | chr1_2:64645158-64645177 | Msa0084890:intron | 25.0% |
| ! | AGAGTATAATTAATTGGGAA+TGG | - | chr1_2:64645291-64645310 | Msa0084890:CDS | 25.0% |
| ! | ACAATAAAGTTATTACCATC+AGG | + | chr1_2:64645423-64645442 | None:intergenic | 25.0% |
| ! | TGATGGTAATAACTTTATTG+TGG | - | chr1_2:64645422-64645441 | Msa0084890:CDS | 25.0% |
| ! | GATGGTAATAACTTTATTGT+GGG | - | chr1_2:64645423-64645442 | Msa0084890:CDS | 25.0% |
| ! | AATTATCTTTGATACTGATG+TGG | - | chr1_2:64645595-64645614 | Msa0084890:intron | 25.0% |
| !! | CTTTTATTGTTAGCTATATC+TGG | - | chr1_2:64645784-64645803 | Msa0084890:intron | 25.0% |
| !! | AAGTTTCTTTTCGATAAATG+TGG | + | chr1_2:64645925-64645944 | None:intergenic | 25.0% |
| ! | ACATTTATCGAAAAGAAACT+TGG | - | chr1_2:64645924-64645943 | Msa0084890:intron | 25.0% |
| ! | TGGATAAATTTAAATTGGCA+TGG | - | chr1_2:64645949-64645968 | Msa0084890:intron | 25.0% |
| ! | AAGCTTATGATAAACTTCAA+GGG | + | chr1_2:64645998-64646017 | None:intergenic | 25.0% |
| !! | TGTTAATGCTAATTTTTCTC+AGG | - | chr1_2:64646079-64646098 | Msa0084890:intron | 25.0% |
| ! | CAATTTATCTGACTTCTATA+AGG | + | chr1_2:64646225-64646244 | None:intergenic | 25.0% |
| ! | CTAAAATACTTAGGCTTATT+TGG | - | chr1_2:64646279-64646298 | Msa0084890:intron | 25.0% |
| ! | TCGTAACTAAAAGTAGATAT+AGG | - | chr1_2:64646443-64646462 | Msa0084890:intron | 25.0% |
| ! | ATAGGAAATGAAAACTGAAA+CGG | - | chr1_2:64646461-64646480 | Msa0084890:intron | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr1_2:64646624-64646643 | Msa0084890:intron | 25.0% |
| ! | TGCTAAATATTTAACTATGG+AGG | - | chr1_2:64646824-64646843 | Msa0084890:intron | 25.0% |
| ! | TACGATAAATTCTTACCATT+AGG | + | chr1_2:64646954-64646973 | None:intergenic | 25.0% |
| ! | AACCACTCAATTATAAGTTT+AGG | - | chr1_2:64647064-64647083 | Msa0084890:intron | 25.0% |
| ! | AAAATTAGCGGTAAAATTGT+AGG | - | chr1_2:64647862-64647881 | Msa0084890:intron | 25.0% |
| ! | AAATTAGCGGTAAAATTGTA+GGG | - | chr1_2:64647863-64647882 | Msa0084890:intron | 25.0% |
| ! | AGCTAATGATAGTTACTAAA+CGG | - | chr1_2:64647993-64648012 | Msa0084890:intron | 25.0% |
| ! | TCTTTGTATAATGCAGAAAT+AGG | + | chr1_2:64648516-64648535 | None:intergenic | 25.0% |
| !! | TATTTCTGCATTATACAAAG+AGG | - | chr1_2:64648515-64648534 | Msa0084890:intron | 25.0% |
| TTAATTTCATCACATCCACA+TGG | - | chr1_2:64640873-64640892 | Msa0084890:intron | 30.0% | |
| GCTGCAAAATAACAACAATA+CGG | + | chr1_2:64640948-64640967 | None:intergenic | 30.0% | |
| TATTAAGGGCTTGTATGAAT+TGG | + | chr1_2:64641219-64641238 | None:intergenic | 30.0% | |
| AATTTGAGAGATATCGATGA+TGG | - | chr1_2:64641414-64641433 | Msa0084890:intron | 30.0% | |
| TGAGACCAGAAATCTAATAA+AGG | - | chr1_2:64641481-64641500 | Msa0084890:CDS | 30.0% | |
| !! | TTTTTATTTGCAGCAACATC+AGG | - | chr1_2:64641510-64641529 | Msa0084890:intron | 30.0% |
| !! | TTTTATTTGCAGCAACATCA+GGG | - | chr1_2:64641511-64641530 | Msa0084890:intron | 30.0% |
| ATATAAATAGCTTGGAAGGA+AGG | + | chr1_2:64641958-64641977 | None:intergenic | 30.0% | |
| ATGAATGTGTGCTAATGTAT+CGG | - | chr1_2:64641976-64641995 | Msa0084890:intron | 30.0% | |
| !! | GACTTTCTAAAGCTTCAAAA+CGG | - | chr1_2:64642168-64642187 | Msa0084890:intron | 30.0% |
| AATTTACATAGTGACATACG+TGG | - | chr1_2:64642412-64642431 | Msa0084890:intron | 30.0% | |
| AATTTAGACCTGTAGCAATT+TGG | + | chr1_2:64642596-64642615 | None:intergenic | 30.0% | |
| AAAACATGAGCAATGATATG+AGG | + | chr1_2:64642622-64642641 | None:intergenic | 30.0% | |
| !!! | AATGGTTTTGAAGAGAATTC+TGG | - | chr1_2:64642690-64642709 | Msa0084890:intron | 30.0% |
| TCATAATCATTATTTGCGGA+AGG | - | chr1_2:64643015-64643034 | Msa0084890:intron | 30.0% | |
| TATGTATTCTAGGTTAGCAT+AGG | - | chr1_2:64643128-64643147 | Msa0084890:intron | 30.0% | |
| TATCTGTTGTTGTCTGTTTA+CGG | - | chr1_2:64643268-64643287 | Msa0084890:intron | 30.0% | |
| CATAACCATTCAATAAGTTC+GGG | - | chr1_2:64643519-64643538 | Msa0084890:intron | 30.0% | |
| ATAACCATTCAATAAGTTCG+GGG | - | chr1_2:64643520-64643539 | Msa0084890:intron | 30.0% | |
| ! | ATGATGTGAAAGCACATATT+AGG | - | chr1_2:64643699-64643718 | Msa0084890:intron | 30.0% |
| !!! | GTCCCCCTTATTTTAAAATT+CGG | + | chr1_2:64643862-64643881 | None:intergenic | 30.0% |
| TTGAATCCATTTCTGTTGAA+AGG | + | chr1_2:64644303-64644322 | None:intergenic | 30.0% | |
| GCTGAAATAAAATGGTAACT+TGG | - | chr1_2:64644536-64644555 | Msa0084890:intron | 30.0% | |
| GAAATAAAATGGTAACTTGG+TGG | - | chr1_2:64644539-64644558 | Msa0084890:intron | 30.0% | |
| !!! | ATTTGGAGCAGTTTTATTGA+TGG | - | chr1_2:64644655-64644674 | Msa0084890:intron | 30.0% |
| AATCCTTCACAAATTAGCTA+TGG | - | chr1_2:64644725-64644744 | Msa0084890:CDS | 30.0% | |
| ! | GTGTTGTCAAATATTGGTTA+TGG | + | chr1_2:64644782-64644801 | None:intergenic | 30.0% |
| TAACCAATATTTGACAACAC+TGG | - | chr1_2:64644782-64644801 | Msa0084890:intron | 30.0% | |
| AAACCAGTGTTGTCAAATAT+TGG | + | chr1_2:64644788-64644807 | None:intergenic | 30.0% | |
| ! | AATATTTGACAACACTGGTT+TGG | - | chr1_2:64644787-64644806 | Msa0084890:intron | 30.0% |
| !! | ATGACTCAGTTTGTTATTGT+AGG | - | chr1_2:64644876-64644895 | Msa0084890:intron | 30.0% |
| AGCGTGCATATTCTAATATT+TGG | + | chr1_2:64645238-64645257 | None:intergenic | 30.0% | |
| !!! | TGATATTCACTGTTGCTTTT+TGG | - | chr1_2:64645333-64645352 | Msa0084890:CDS | 30.0% |
| !!! | GTTGCTTTTTGGTGAATAAT+AGG | - | chr1_2:64645344-64645363 | Msa0084890:CDS | 30.0% |
| ! | TTTTGGTGAATAATAGGCAA+AGG | - | chr1_2:64645350-64645369 | Msa0084890:CDS | 30.0% |
| ! | AACTTCTGGTAGTCAATTTT+TGG | - | chr1_2:64645395-64645414 | Msa0084890:CDS | 30.0% |
| ! | TCTTTTCGATAAATGTGGTA+AGG | + | chr1_2:64645920-64645939 | None:intergenic | 30.0% |
| TATCGAAAAGAAACTTGGTA+TGG | - | chr1_2:64645929-64645948 | Msa0084890:intron | 30.0% | |
| GAAGCTTATGATAAACTTCA+AGG | + | chr1_2:64645999-64646018 | None:intergenic | 30.0% | |
| ! | TAATGCTAATTTTTCTCAGG+TGG | - | chr1_2:64646082-64646101 | Msa0084890:intron | 30.0% |
| CTATGCATGCTAAAATACTT+AGG | - | chr1_2:64646270-64646289 | Msa0084890:intron | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr1_2:64646595-64646614 | None:intergenic | 30.0% | |
| AGCCTAAACTTATAATTGAG+TGG | + | chr1_2:64647069-64647088 | None:intergenic | 30.0% | |
| GTGAACTCAACATTAACATA+TGG | + | chr1_2:64647530-64647549 | None:intergenic | 30.0% | |
| ! | CCAAATCTTTCAGATCTTTT+CGG | - | chr1_2:64647565-64647584 | Msa0084890:CDS | 30.0% |
| ! | CAAATCTTTCAGATCTTTTC+GGG | - | chr1_2:64647566-64647585 | Msa0084890:CDS | 30.0% |
| GTAGTGTTTGGTAAAATTAG+CGG | - | chr1_2:64647850-64647869 | Msa0084890:intron | 30.0% | |
| AATTAGCGGTAAAATTGTAG+GGG | - | chr1_2:64647864-64647883 | Msa0084890:intron | 30.0% | |
| GCTAATGATAGTTACTAAAC+GGG | - | chr1_2:64647994-64648013 | Msa0084890:intron | 30.0% | |
| ! | CATTTTACCTCAATGTTAAG+AGG | + | chr1_2:64648288-64648307 | None:intergenic | 30.0% |
| ! | ATGAACATACTTGTTACTGT+AGG | - | chr1_2:64648368-64648387 | Msa0084890:intron | 30.0% |
| ! | ATGAGTGAGATCATTTGTTA+AGG | - | chr1_2:64648628-64648647 | Msa0084890:intron | 30.0% |
| TTAAGGATTAGATATATCCG+AGG | - | chr1_2:64648645-64648664 | Msa0084890:intron | 30.0% | |
| TTGCACAAAGAATCATCTAT+TGG | - | chr1_2:64648827-64648846 | Msa0084890:intron | 30.0% | |
| TTGTTACCTGTGATTTAGTG+TGG | - | chr1_2:64640790-64640809 | Msa0084890:intron | 35.0% | |
| ! | GATGAAATTAAGTTGCAGAG+CGG | + | chr1_2:64640864-64640883 | None:intergenic | 35.0% |
| !! | TGGAATTGAAAGTATTGGGT+TGG | - | chr1_2:64641281-64641300 | Msa0084890:CDS | 35.0% |
| CTCAAATTTACGGACATCTA+GGG | + | chr1_2:64641402-64641421 | None:intergenic | 35.0% | |
| TCTCAAATTTACGGACATCT+AGG | + | chr1_2:64641403-64641422 | None:intergenic | 35.0% | |
| CTAGACTCTTATTGTCATAC+AGG | - | chr1_2:64641846-64641865 | Msa0084890:intron | 35.0% | |
| ! | GGATGTTTGTTTCTTCCATT+TGG | - | chr1_2:64642091-64642110 | Msa0084890:CDS | 35.0% |
| AAGTCAGTCATGTCAAGATA+TGG | + | chr1_2:64642153-64642172 | None:intergenic | 35.0% | |
| !! | CTTGATAATGCAGCAAAATG+TGG | - | chr1_2:64642237-64642256 | Msa0084890:intron | 35.0% |
| CCACGATATAAAGGTTTAAG+AGG | + | chr1_2:64642295-64642314 | None:intergenic | 35.0% | |
| CCTCTTAAACCTTTATATCG+TGG | - | chr1_2:64642292-64642311 | Msa0084890:CDS | 35.0% | |
| CAGCATTTGAGAGTTTCTAT+TGG | - | chr1_2:64642550-64642569 | Msa0084890:intron | 35.0% | |
| !! | GAGAAATCGCATTCTGAAAT+TGG | + | chr1_2:64642918-64642937 | None:intergenic | 35.0% |
| TCAGTGAATAAGAATCTGCT+TGG | + | chr1_2:64643088-64643107 | None:intergenic | 35.0% | |
| ATTAGACTCGACTATAACTG+CGG | + | chr1_2:64643319-64643338 | None:intergenic | 35.0% | |
| ATTGAGAAGAGAGGATTTCT+GGG | + | chr1_2:64643432-64643451 | None:intergenic | 35.0% | |
| AATTGAGAAGAGAGGATTTC+TGG | + | chr1_2:64643433-64643452 | None:intergenic | 35.0% | |
| ATTGTCGAGAAAAAGTGAGA+AGG | + | chr1_2:64643472-64643491 | None:intergenic | 35.0% | |
| TAACCATTCAATAAGTTCGG+GGG | - | chr1_2:64643521-64643540 | Msa0084890:intron | 35.0% | |
| ! | TTTGATGACTTTACCTGTTG+TGG | - | chr1_2:64643596-64643615 | Msa0084890:CDS | 35.0% |
| TGTGGCTATTGTTGAAACTT+TGG | - | chr1_2:64643614-64643633 | Msa0084890:intron | 35.0% | |
| AAAAAATCCCAAACATGAGC+CGG | + | chr1_2:64643676-64643695 | None:intergenic | 35.0% | |
| ACAACGACAAAAATGAGATG+AGG | - | chr1_2:64643790-64643809 | Msa0084890:CDS | 35.0% | |
| CAACGACAAAAATGAGATGA+GGG | - | chr1_2:64643791-64643810 | Msa0084890:CDS | 35.0% | |
| ! | ACAAGGCTTAAATGCACTTT+TGG | + | chr1_2:64643884-64643903 | None:intergenic | 35.0% |
| ! | GCATTTTTATGTCCTGTTGA+CGG | - | chr1_2:64644009-64644028 | Msa0084890:CDS | 35.0% |
| ! | CATTTTTATGTCCTGTTGAC+GGG | - | chr1_2:64644010-64644029 | Msa0084890:CDS | 35.0% |
| GAAACTGTAATAGTGAGTTG+TGG | - | chr1_2:64644126-64644145 | Msa0084890:CDS | 35.0% | |
| TTGTGGAGAATATATCCAGT+TGG | - | chr1_2:64644143-64644162 | Msa0084890:CDS | 35.0% | |
| TGTGGAGAATATATCCAGTT+GGG | - | chr1_2:64644144-64644163 | Msa0084890:CDS | 35.0% | |
| !! | TTCAAGTTTTTCACCAATGC+TGG | - | chr1_2:64644318-64644337 | Msa0084890:CDS | 35.0% |
| !! | TGGTTTTACAGCTTCTGATA+TGG | - | chr1_2:64644559-64644578 | Msa0084890:intron | 35.0% |
| ! | TTTTACAGCTTCTGATATGG+CGG | - | chr1_2:64644562-64644581 | Msa0084890:intron | 35.0% |
| AATTCCTCCATAAAATGCCA+TGG | - | chr1_2:64644696-64644715 | Msa0084890:intron | 35.0% | |
| ! | TGGTTTGGAGATACAAATAC+TGG | - | chr1_2:64644802-64644821 | Msa0084890:intron | 35.0% |
| GGTTTGGAGATACAAATACT+GGG | - | chr1_2:64644803-64644822 | Msa0084890:intron | 35.0% | |
| TTCCATATAGTTGTTGATGC+AGG | - | chr1_2:64644983-64645002 | Msa0084890:intron | 35.0% | |
| TCCATATAGTTGTTGATGCA+GGG | - | chr1_2:64644984-64645003 | Msa0084890:intron | 35.0% | |
| ! | GCTCTTTTATGCAAAGCATA+TGG | - | chr1_2:64645193-64645212 | Msa0084890:intron | 35.0% |
| GCATATGGTTTACAAATCTG+CGG | - | chr1_2:64645208-64645227 | Msa0084890:CDS | 35.0% | |
| TTGTGGGAATAATTTCAGCT+AGG | - | chr1_2:64645439-64645458 | Msa0084890:intron | 35.0% | |
| TAACAATGGCTTCTGTATAC+AGG | - | chr1_2:64645482-64645501 | Msa0084890:intron | 35.0% | |
| AGCAATGAAAGCTATAACCA+AGG | - | chr1_2:64645544-64645563 | Msa0084890:intron | 35.0% | |
| !! | CAAGATCAGCTTTGTTATCA+AGG | + | chr1_2:64645574-64645593 | None:intergenic | 35.0% |
| ! | CTTGATAACAAAGCTGATCT+TGG | - | chr1_2:64645572-64645591 | Msa0084890:intron | 35.0% |
| TCAAGGAAATCAAACGATTC+CGG | + | chr1_2:64645735-64645754 | None:intergenic | 35.0% | |
| ! | GAATCGTTTGATTTCCTTGA+TGG | - | chr1_2:64645735-64645754 | Msa0084890:CDS | 35.0% |
| ! | GAAGTATACAGAGAAGTGTA+AGG | + | chr1_2:64645821-64645840 | None:intergenic | 35.0% |
| TGCTAGGCAGAATGATAAAA+AGG | + | chr1_2:64645855-64645874 | None:intergenic | 35.0% | |
| CTTATGATAAACTTCAAGGG+AGG | + | chr1_2:64645995-64646014 | None:intergenic | 35.0% | |
| GATTGATGAAGCTATTCGTT+TGG | - | chr1_2:64646141-64646160 | Msa0084890:intron | 35.0% | |
| TATTGCTGACAGAACTCTAA+TGG | - | chr1_2:64646850-64646869 | Msa0084890:intron | 35.0% | |
| ATTGCTGACAGAACTCTAAT+GGG | - | chr1_2:64646851-64646870 | Msa0084890:intron | 35.0% | |
| GAGCTCTTAAGGAAAACAAT+TGG | - | chr1_2:64646911-64646930 | Msa0084890:intron | 35.0% | |
| !! | GAAAACAATTGGCTTGATGA+TGG | - | chr1_2:64646922-64646941 | Msa0084890:intron | 35.0% |
| ATTTCGTATAAAGCAGAGGT+GGG | + | chr1_2:64647179-64647198 | None:intergenic | 35.0% | |
| ACAAGGTAGAGTCAAGTTAA+AGG | + | chr1_2:64647204-64647223 | None:intergenic | 35.0% | |
| !!! | GTTTTGACTGGTCTAATAGA+AGG | - | chr1_2:64647395-64647414 | Msa0084890:intron | 35.0% |
| !!! | CTTTAAGATCTGGATGGTTT+TGG | + | chr1_2:64647466-64647485 | None:intergenic | 35.0% |
| CAAAACCATCCAGATCTTAA+AGG | - | chr1_2:64647464-64647483 | Msa0084890:intron | 35.0% | |
| CCGAAAAGATCTGAAAGATT+TGG | + | chr1_2:64647568-64647587 | None:intergenic | 35.0% | |
| AGAAACTGTGCTGAAACATT+TGG | - | chr1_2:64647596-64647615 | Msa0084890:intron | 35.0% | |
| ! | AGCTAGTTTATAGCTGATAG+AGG | - | chr1_2:64647806-64647825 | Msa0084890:intron | 35.0% |
| TTCAATCAGATCAGAGTTTC+TGG | - | chr1_2:64648213-64648232 | Msa0084890:intron | 35.0% | |
| CATGGAGTGATAATCTAAGA+AGG | + | chr1_2:64648254-64648273 | None:intergenic | 35.0% | |
| ! | TCAATGTTAAGAGGAAGTAC+AGG | + | chr1_2:64648279-64648298 | None:intergenic | 35.0% |
| TGTACTTCCTCTTAACATTG+AGG | - | chr1_2:64648278-64648297 | Msa0084890:intron | 35.0% | |
| TCAGCCTTGAACAAATTTGT+CGG | - | chr1_2:64648468-64648487 | Msa0084890:intron | 35.0% | |
| ! | TGATCCGACAAATTTGTTCA+AGG | + | chr1_2:64648475-64648494 | None:intergenic | 35.0% |
| TTCTATTAACATAGCAGCAG+CGG | - | chr1_2:64648538-64648557 | Msa0084890:intron | 35.0% | |
| ATACAAAAACTACAGCCATG+TGG | - | chr1_2:64648599-64648618 | Msa0084890:intron | 35.0% | |
| AAATTCCATCTCAGAAACCT+CGG | + | chr1_2:64648665-64648684 | None:intergenic | 35.0% | |
| AACGTTGATGTTCTTTGACT+TGG | - | chr1_2:64648740-64648759 | Msa0084890:intron | 35.0% | |
| ATATACGCGTTTGAACTTGA+AGG | - | chr1_2:64648777-64648796 | Msa0084890:intron | 35.0% | |
| !! | TGATATTGGGTTGAACTTCA+CGG | + | chr1_2:64648912-64648931 | None:intergenic | 35.0% |
| ! | CTTTTATCGTACACCTGCAA+AGG | - | chr1_2:64640766-64640785 | Msa0084890:three_prime_UTR | 40.0% |
| TACCTGTGATTTAGTGTGGA+AGG | - | chr1_2:64640794-64640813 | Msa0084890:intron | 40.0% | |
| AACCTTCCACACTAAATCAC+AGG | + | chr1_2:64640799-64640818 | None:intergenic | 40.0% | |
| GGAAGGTTAGAGAAGAAGTT+AGG | - | chr1_2:64640811-64640830 | Msa0084890:intron | 40.0% | |
| GTAAAAATTGACCTGCCATG+TGG | + | chr1_2:64640891-64640910 | None:intergenic | 40.0% | |
| !! | AGCTGTTTTCATAGCTACTG+TGG | - | chr1_2:64641072-64641091 | Msa0084890:three_prime_UTR | 40.0% |
| GACTCAACTGTCTATTCTGT+TGG | + | chr1_2:64641572-64641591 | None:intergenic | 40.0% | |
| AGAATAGACAGTTGAGTCGA+AGG | - | chr1_2:64641574-64641593 | Msa0084890:intron | 40.0% | |
| GAATAGACAGTTGAGTCGAA+GGG | - | chr1_2:64641575-64641594 | Msa0084890:intron | 40.0% | |
| CGGGAAGTAAAATCGTTCAA+GGG | + | chr1_2:64641699-64641718 | None:intergenic | 40.0% | |
| ! | CCTTGAACGATTTTACTTCC+CGG | - | chr1_2:64641697-64641716 | Msa0084890:intron | 40.0% |
| ATGGCAGAGAATATTTCTCC+GGG | + | chr1_2:64641718-64641737 | None:intergenic | 40.0% | |
| CATGGCAGAGAATATTTCTC+CGG | + | chr1_2:64641719-64641738 | None:intergenic | 40.0% | |
| TAAATAGCTTGGAAGGAAGG+TGG | + | chr1_2:64641955-64641974 | None:intergenic | 40.0% | |
| AGCTGAAACAGAAGTCCAAA+TGG | + | chr1_2:64642109-64642128 | None:intergenic | 40.0% | |
| !! | TTCTAAAGCTTCAAAACGGC+AGG | - | chr1_2:64642172-64642191 | Msa0084890:intron | 40.0% |
| ! | CTTTTTCTCCACTAACCATC+CGG | + | chr1_2:64642515-64642534 | None:intergenic | 40.0% |
| TAGCAATTTGGCTGATATCC+GGG | + | chr1_2:64642584-64642603 | None:intergenic | 40.0% | |
| GTAGCAATTTGGCTGATATC+CGG | + | chr1_2:64642585-64642604 | None:intergenic | 40.0% | |
| GATATCAGCCAAATTGCTAC+AGG | - | chr1_2:64642585-64642604 | Msa0084890:intron | 40.0% | |
| CTGATACATGAAAGATGGAC+TGG | - | chr1_2:64642734-64642753 | Msa0084890:intron | 40.0% | |
| !! | TTGCCACTTGCAAGTCTTTT+GGG | - | chr1_2:64642798-64642817 | Msa0084890:CDS | 40.0% |
| !! | CAAGTCTTTTGGGTCAAAAG+AGG | - | chr1_2:64642808-64642827 | Msa0084890:CDS | 40.0% |
| TTTCAGAATGCGATTTCTCG+AGG | - | chr1_2:64642919-64642938 | Msa0084890:intron | 40.0% | |
| ATCATTATTTGCGGAAGGAC+TGG | - | chr1_2:64643020-64643039 | Msa0084890:intron | 40.0% | |
| ! | TTTCTGGGAGAAAATCTGAG+TGG | + | chr1_2:64643417-64643436 | None:intergenic | 40.0% |
| AGTGTGAGAATTGAGAAGAG+AGG | + | chr1_2:64643441-64643460 | None:intergenic | 40.0% | |
| AACCATTCAATAAGTTCGGG+GGG | - | chr1_2:64643522-64643541 | Msa0084890:intron | 40.0% | |
| GTTTCAACAATAGCCACAAC+AGG | + | chr1_2:64643612-64643631 | None:intergenic | 40.0% | |
| AAAAATCCCAAACATGAGCC+GGG | + | chr1_2:64643675-64643694 | None:intergenic | 40.0% | |
| TGCCACGTCATCAATGAATA+TGG | - | chr1_2:64643766-64643785 | Msa0084890:intron | 40.0% | |
| !! | TGCCATATTCATTGATGACG+TGG | + | chr1_2:64643771-64643790 | None:intergenic | 40.0% |
| ! | AGTGTGCTATTGAACATAGC+TGG | + | chr1_2:64643976-64643995 | None:intergenic | 40.0% |
| GTTCAATAGCACACTCACAA+AGG | - | chr1_2:64643981-64644000 | Msa0084890:CDS | 40.0% | |
| ATCATAATAGACCCGTCAAC+AGG | + | chr1_2:64644024-64644043 | None:intergenic | 40.0% | |
| GACGGGTCTATTATGATAAC+AGG | - | chr1_2:64644027-64644046 | Msa0084890:intron | 40.0% | |
| TGGCTAAGCTTAATTGCGAA+TGG | + | chr1_2:64644181-64644200 | None:intergenic | 40.0% | |
| CATCTGCCTTTCAACAGAAA+TGG | - | chr1_2:64644294-64644313 | Msa0084890:intron | 40.0% | |
| ! | AAGTTTTTCACCAATGCTGG+TGG | - | chr1_2:64644321-64644340 | Msa0084890:CDS | 40.0% |
| TTTACAGCTTCTGATATGGC+GGG | - | chr1_2:64644563-64644582 | Msa0084890:intron | 40.0% | |
| !!! | TGGAGCAGTTTTATTGATGG+TGG | - | chr1_2:64644658-64644677 | Msa0084890:intron | 40.0% |
| !! | TTTATTGATGGTGGACCATG+TGG | - | chr1_2:64644667-64644686 | Msa0084890:intron | 40.0% |
| ! | CTGCCATAGCTAATTTGTGA+AGG | + | chr1_2:64644731-64644750 | None:intergenic | 40.0% |
| TTGGTTATGGCAGATTACAG+TGG | + | chr1_2:64644769-64644788 | None:intergenic | 40.0% | |
| ACTATATGGAAACCCTCCAA+TGG | + | chr1_2:64644974-64644993 | None:intergenic | 40.0% | |
| TCCCTGCATCAACAACTATA+TGG | + | chr1_2:64644988-64645007 | None:intergenic | 40.0% | |
| ATAGTTGTTGATGCAGGGAA+TGG | - | chr1_2:64644989-64645008 | Msa0084890:intron | 40.0% | |
| GAGACTTTCGAGGAAACTTA+CGG | + | chr1_2:64645032-64645051 | None:intergenic | 40.0% | |
| AAATGCTAAGGAGACTTTCG+AGG | + | chr1_2:64645042-64645061 | None:intergenic | 40.0% | |
| ATGGTTTACAAATCTGCGGT+AGG | - | chr1_2:64645212-64645231 | Msa0084890:CDS | 40.0% | |
| ! | TGAATAATAGGCAAAGGTGC+TGG | - | chr1_2:64645356-64645375 | Msa0084890:CDS | 40.0% |
| !!! | AGTCAATTTTTGGAGCCTGA+TGG | - | chr1_2:64645405-64645424 | Msa0084890:CDS | 40.0% |
| ! | TTTCAGCTAGGCATTGTACT+TGG | - | chr1_2:64645451-64645470 | Msa0084890:intron | 40.0% |
| ACTTGGACTTCGAGTAACAA+TGG | - | chr1_2:64645468-64645487 | Msa0084890:intron | 40.0% | |
| ! | TTTGTTATCAAGGACTGCCT+TGG | + | chr1_2:64645564-64645583 | None:intergenic | 40.0% |
| TCTTTGATACTGATGTGGAC+AGG | - | chr1_2:64645600-64645619 | Msa0084890:intron | 40.0% | |
| AACGATTCCGGTTGAATTCA+CGG | + | chr1_2:64645723-64645742 | None:intergenic | 40.0% | |
| AAGAACAATAGCTGCCATCA+AGG | + | chr1_2:64645752-64645771 | None:intergenic | 40.0% | |
| AATAGTTGTTCCAGGATGCT+AGG | + | chr1_2:64645871-64645890 | None:intergenic | 40.0% | |
| TCTGTGACAATAGTTGTTCC+AGG | + | chr1_2:64645879-64645898 | None:intergenic | 40.0% | |
| TGTCACAGATAGTGTGACTT+CGG | - | chr1_2:64645890-64645909 | Msa0084890:intron | 40.0% | |
| TGATAAACTTCAAGGGAGGA+GGG | + | chr1_2:64645991-64646010 | None:intergenic | 40.0% | |
| ATGATAAACTTCAAGGGAGG+AGG | + | chr1_2:64645992-64646011 | None:intergenic | 40.0% | |
| !! | AAACATCATCGGTTCAAGAG+AGG | - | chr1_2:64646106-64646125 | Msa0084890:intron | 40.0% |
| ! | ACGGTTTTCTCAAACCAAAG+AGG | - | chr1_2:64646480-64646499 | Msa0084890:intron | 40.0% |
| GTAATCGCTAAAGACCTCTT+TGG | + | chr1_2:64646497-64646516 | None:intergenic | 40.0% | |
| TAGAAATGAAGCACAGACAC+CGG | + | chr1_2:64646672-64646691 | None:intergenic | 40.0% | |
| TTGCTGACAGAACTCTAATG+GGG | - | chr1_2:64646852-64646871 | Msa0084890:intron | 40.0% | |
| ATCTGGCAATTGAAACCAGT+GGG | - | chr1_2:64646884-64646903 | Msa0084890:intron | 40.0% | |
| !! | TGATGATGGTGCATACCTAA+TGG | - | chr1_2:64646936-64646955 | Msa0084890:intron | 40.0% |
| CATTTCGTATAAAGCAGAGG+TGG | + | chr1_2:64647180-64647199 | None:intergenic | 40.0% | |
| CACCTCTGCTTTATACGAAA+TGG | - | chr1_2:64647178-64647197 | Msa0084890:CDS | 40.0% | |
| ACCTTGTGTTAGAACGTGAT+AGG | - | chr1_2:64647217-64647236 | Msa0084890:CDS | 40.0% | |
| CCTTGTGTTAGAACGTGATA+GGG | - | chr1_2:64647218-64647237 | Msa0084890:CDS | 40.0% | |
| AACCATCCAGATCTTAAAGG+AGG | - | chr1_2:64647467-64647486 | Msa0084890:intron | 40.0% | |
| ACCATCCAGATCTTAAAGGA+GGG | - | chr1_2:64647468-64647487 | Msa0084890:intron | 40.0% | |
| !! | TTCAGATCTTTTCGGGAGTA+TGG | - | chr1_2:64647573-64647592 | Msa0084890:CDS | 40.0% |
| ! | AATTCAAAGGAGCCTTTTGC+AGG | + | chr1_2:64647647-64647666 | None:intergenic | 40.0% |
| AAGGCTCCTTTGAATTACGA+AGG | - | chr1_2:64647651-64647670 | Msa0084890:intron | 40.0% | |
| AGGCTCCTTTGAATTACGAA+GGG | - | chr1_2:64647652-64647671 | Msa0084890:intron | 40.0% | |
| CATACCCCTTCGTAATTCAA+AGG | + | chr1_2:64647660-64647679 | None:intergenic | 40.0% | |
| AATTATACTACGGCCCTGTT+GGG | - | chr1_2:64647748-64647767 | Msa0084890:intron | 40.0% | |
| !! | GGGTAAAACATAGCGGATAA+CGG | - | chr1_2:64647768-64647787 | Msa0084890:intron | 40.0% |
| AAGTGATAGTTGGGTCTGTT+TGG | + | chr1_2:64648071-64648090 | None:intergenic | 40.0% | |
| ! | TTGTATGCTACTTCCAACTC+CGG | + | chr1_2:64648097-64648116 | None:intergenic | 40.0% |
| !! | CAGATCAGAGTTTCTGGTTA+TGG | - | chr1_2:64648219-64648238 | Msa0084890:intron | 40.0% |
| !! | ATCAGAGTTTCTGGTTATGG+TGG | - | chr1_2:64648222-64648241 | Msa0084890:intron | 40.0% |
| !! | TCAGAGTTTCTGGTTATGGT+GGG | - | chr1_2:64648223-64648242 | Msa0084890:intron | 40.0% |
| ! | TAAGAGGAAGTACAGGATCA+TGG | + | chr1_2:64648272-64648291 | None:intergenic | 40.0% |
| AATTCCAACACAAGCTGCTA+AGG | + | chr1_2:64648311-64648330 | None:intergenic | 40.0% | |
| AACGAAGATGCTGTAAAGCT+TGG | - | chr1_2:64648399-64648418 | Msa0084890:intron | 40.0% | |
| TCTATTAACATAGCAGCAGC+GGG | - | chr1_2:64648539-64648558 | Msa0084890:intron | 40.0% | |
| ! | TATATCCGAGGTTTCTGAGA+TGG | - | chr1_2:64648657-64648676 | Msa0084890:intron | 40.0% |
| GACGACACTACTCTCAAAAT+GGG | + | chr1_2:64648698-64648717 | None:intergenic | 40.0% | |
| AGACGACACTACTCTCAAAA+TGG | + | chr1_2:64648699-64648718 | None:intergenic | 40.0% | |
| AGTAGTGTCGTCTCTATTTG+TGG | - | chr1_2:64648706-64648725 | Msa0084890:intron | 40.0% | |
| GAAGTTCAACCCAATATCAG+AGG | - | chr1_2:64648913-64648932 | Msa0084890:five_prime_UTR | 40.0% | |
| TCACGAGTTCCTCTGATATT+GGG | + | chr1_2:64648925-64648944 | None:intergenic | 40.0% | |
| ATCACGAGTTCCTCTGATAT+TGG | + | chr1_2:64648926-64648945 | None:intergenic | 40.0% | |
| ATCAGAGGAACTCGTGATAT+TGG | - | chr1_2:64648928-64648947 | Msa0084890:five_prime_UTR | 40.0% | |
| AGGAACTCGTGATATTGGTA+GGG | - | chr1_2:64648933-64648952 | Msa0084890:five_prime_UTR | 40.0% | |
| CACAGGTAACAATCCTTTGC+AGG | + | chr1_2:64640782-64640801 | None:intergenic | 45.0% | |
| TTTCATCACATCCACATGGC+AGG | - | chr1_2:64640877-64640896 | Msa0084890:three_prime_UTR | 45.0% | |
| TAGCTACTGTGGAGAGCTTA+TGG | - | chr1_2:64641083-64641102 | Msa0084890:three_prime_UTR | 45.0% | |
| GTGCATAAGCATACGTATGC+AGG | + | chr1_2:64641177-64641196 | None:intergenic | 45.0% | |
| ATTCTGTTGGCAGCATTGTG+AGG | + | chr1_2:64641559-64641578 | None:intergenic | 45.0% | |
| AAGCGAGTTGCGCATATAAG+GGG | + | chr1_2:64641610-64641629 | None:intergenic | 45.0% | |
| GAAGCGAGTTGCGCATATAA+GGG | + | chr1_2:64641611-64641630 | None:intergenic | 45.0% | |
| TGACAATGTGCGCAATTGCA+TGG | + | chr1_2:64641673-64641692 | None:intergenic | 45.0% | |
| CCGGGAAGTAAAATCGTTCA+AGG | + | chr1_2:64641700-64641719 | None:intergenic | 45.0% | |
| CGGAGAAATATTCTCTGCCA+TGG | - | chr1_2:64641717-64641736 | Msa0084890:intron | 45.0% | |
| TCAAAACGGCAGGTTAGCAA+TGG | - | chr1_2:64642182-64642201 | Msa0084890:intron | 45.0% | |
| GCAAAATGTGGCCGTAATTG+CGG | - | chr1_2:64642249-64642268 | Msa0084890:CDS | 45.0% | |
| GGTTTAAGAGGTCTCTGCAA+CGG | + | chr1_2:64642283-64642302 | None:intergenic | 45.0% | |
| CAATTGCGGCCACGATATAA+AGG | + | chr1_2:64642304-64642323 | None:intergenic | 45.0% | |
| TTATATCGTGGCCGCAATTG+CGG | - | chr1_2:64642304-64642323 | Msa0084890:CDS | 45.0% | |
| ACATAGTGACATACGTGGTG+TGG | - | chr1_2:64642417-64642436 | Msa0084890:intron | 45.0% | |
| GAACCTGTTGCTGAAGCAAT+AGG | - | chr1_2:64642478-64642497 | Msa0084890:intron | 45.0% | |
| TTTCTATTGGCCACGATTCC+CGG | - | chr1_2:64642563-64642582 | Msa0084890:intron | 45.0% | |
| !! | GTTGCCACTTGCAAGTCTTT+TGG | - | chr1_2:64642797-64642816 | Msa0084890:CDS | 45.0% |
| TGACCCAAAAGACTTGCAAG+TGG | + | chr1_2:64642804-64642823 | None:intergenic | 45.0% | |
| !! | ATAGTGGACAACTTCTAGGC+CGG | + | chr1_2:64642956-64642975 | None:intergenic | 45.0% |
| GCCTAGAAGTTGTCCACTAT+GGG | - | chr1_2:64642956-64642975 | Msa0084890:intron | 45.0% | |
| !! | ACCCATAGTGGACAACTTCT+AGG | + | chr1_2:64642960-64642979 | None:intergenic | 45.0% |
| TAGAAGTTGTCCACTATGGG+TGG | - | chr1_2:64642959-64642978 | Msa0084890:intron | 45.0% | |
| AGAAGTTGTCCACTATGGGT+GGG | - | chr1_2:64642960-64642979 | Msa0084890:intron | 45.0% | |
| TAAATGTCACCCACCCATAG+TGG | + | chr1_2:64642972-64642991 | None:intergenic | 45.0% | |
| CTCTAATGAATGCAGTCACC+TGG | - | chr1_2:64643062-64643081 | Msa0084890:intron | 45.0% | |
| GAATAAGAATCTGCTTGGCC+AGG | + | chr1_2:64643083-64643102 | None:intergenic | 45.0% | |
| GCTGCAAACTATTGTTCAGC+TGG | - | chr1_2:64643220-64643239 | Msa0084890:intron | 45.0% | |
| ACCATTCAATAAGTTCGGGG+GGG | - | chr1_2:64643523-64643542 | Msa0084890:intron | 45.0% | |
| !!! | TTTTGGAATTTTGGTCCCCC+CGG | - | chr1_2:64643654-64643673 | Msa0084890:intron | 45.0% |
| AAAATCCCAAACATGAGCCG+GGG | + | chr1_2:64643674-64643693 | None:intergenic | 45.0% | |
| GCCACACTGAATGTCTATGT+CGG | + | chr1_2:64643735-64643754 | None:intergenic | 45.0% | |
| TGGTTGTGTATGATCCCAAC+TGG | + | chr1_2:64644161-64644180 | None:intergenic | 45.0% | |
| !! | TGACTTGCTGTTCACAGACA+GGG | + | chr1_2:64644276-64644295 | None:intergenic | 45.0% |
| !! | ATGACTTGCTGTTCACAGAC+AGG | + | chr1_2:64644277-64644296 | None:intergenic | 45.0% |
| GGAGGAATTGTCTTTCCACA+TGG | + | chr1_2:64644685-64644704 | None:intergenic | 45.0% | |
| ! | GACACCATGGCATTTTATGG+AGG | + | chr1_2:64644703-64644722 | None:intergenic | 45.0% |
| ! | TGCGACACCATGGCATTTTA+TGG | + | chr1_2:64644706-64644725 | None:intergenic | 45.0% |
| GTTATGGCAGATTACAGTGG+CGG | + | chr1_2:64644766-64644785 | None:intergenic | 45.0% | |
| GTGTTTCTTTGGGTGAGTGT+TGG | - | chr1_2:64645168-64645187 | Msa0084890:intron | 45.0% | |
| TCAGGATTGGGGATATGGTT+TGG | + | chr1_2:64645515-64645534 | None:intergenic | 45.0% | |
| AAACCATATCCCCAATCCTG+AGG | - | chr1_2:64645514-64645533 | Msa0084890:intron | 45.0% | |
| TTCATTGCTGTCTTGTCCTC+AGG | + | chr1_2:64645533-64645552 | None:intergenic | 45.0% | |
| TATCATTCTGCCTAGCATCC+TGG | - | chr1_2:64645858-64645877 | Msa0084890:intron | 45.0% | |
| ACAGATAGTGTGACTTCGGA+TGG | - | chr1_2:64645894-64645913 | Msa0084890:intron | 45.0% | |
| TCTCAGGTGGCAAACATCAT+CGG | - | chr1_2:64646095-64646114 | Msa0084890:intron | 45.0% | |
| TATGAAGCACAGACACTCCT+CGG | - | chr1_2:64646517-64646536 | Msa0084890:intron | 45.0% | |
| CATCTGGCAATTGAAACCAG+TGG | - | chr1_2:64646883-64646902 | Msa0084890:intron | 45.0% | |
| TGCTCTTCTATGAGGAAGCT+CGG | - | chr1_2:64647140-64647159 | Msa0084890:CDS | 45.0% | |
| GGCCATTTCGTATAAAGCAG+AGG | + | chr1_2:64647183-64647202 | None:intergenic | 45.0% | |
| CCCTATCACGTTCTAACACA+AGG | + | chr1_2:64647221-64647240 | None:intergenic | 45.0% | |
| ATCTTGACCTGCACAATGTG+TGG | + | chr1_2:64647323-64647342 | None:intergenic | 45.0% | |
| !!! | GGAGGAAGCAATGTTTTGAC+TGG | - | chr1_2:64647383-64647402 | Msa0084890:intron | 45.0% |
| TGGTCTAATAGAAGGACTCC+AGG | - | chr1_2:64647403-64647422 | Msa0084890:intron | 45.0% | |
| !! | ACCCTCCTTTAAGATCTGGA+TGG | + | chr1_2:64647472-64647491 | None:intergenic | 45.0% |
| !! | GCTTACCCTCCTTTAAGATC+TGG | + | chr1_2:64647476-64647495 | None:intergenic | 45.0% |
| GATCTTAAAGGAGGGTAAGC+TGG | - | chr1_2:64647476-64647495 | Msa0084890:intron | 45.0% | |
| CTCTGATCCAAACCTGCAAA+AGG | - | chr1_2:64647632-64647651 | Msa0084890:intron | 45.0% | |
| ! | AAAGGAGCCTTTTGCAGGTT+TGG | + | chr1_2:64647642-64647661 | None:intergenic | 45.0% |
| GGCTCCTTTGAATTACGAAG+GGG | - | chr1_2:64647653-64647672 | Msa0084890:intron | 45.0% | |
| GAATTATACTACGGCCCTGT+TGG | - | chr1_2:64647747-64647766 | Msa0084890:intron | 45.0% | |
| ! | CCGCTATGTTTTACCCAACA+GGG | + | chr1_2:64647764-64647783 | None:intergenic | 45.0% |
| CCCTGTTGGGTAAAACATAG+CGG | - | chr1_2:64647761-64647780 | Msa0084890:intron | 45.0% | |
| ! | TCCGCTATGTTTTACCCAAC+AGG | + | chr1_2:64647765-64647784 | None:intergenic | 45.0% |
| GACCCAACTATCACTTGTTC+CGG | - | chr1_2:64648075-64648094 | Msa0084890:CDS | 45.0% | |
| CTCCGGAACAAGTGATAGTT+GGG | + | chr1_2:64648080-64648099 | None:intergenic | 45.0% | |
| ACTCCGGAACAAGTGATAGT+TGG | + | chr1_2:64648081-64648100 | None:intergenic | 45.0% | |
| ACTATCACTTGTTCCGGAGT+TGG | - | chr1_2:64648081-64648100 | Msa0084890:CDS | 45.0% | |
| AATGCCTTAGCAGCTTGTGT+TGG | - | chr1_2:64648304-64648323 | Msa0084890:intron | 45.0% | |
| TGTTGTGCTTGCAGCTGTAA+AGG | - | chr1_2:64648425-64648444 | Msa0084890:intron | 45.0% | |
| !! | AGCGGGTTGAGGTGAATTAA+AGG | - | chr1_2:64648556-64648575 | Msa0084890:intron | 45.0% |
| GGTTGAACTTCACGGTAGTA+GGG | + | chr1_2:64648904-64648923 | None:intergenic | 45.0% | |
| GAGGAACTCGTGATATTGGT+AGG | - | chr1_2:64648932-64648951 | Msa0084890:five_prime_UTR | 45.0% | |
| !! | TATTAAACAATTAAAATATT+TGG | - | chr1_2:64644638-64644657 | Msa0084890:intron | 5.0% |
| !!! | TTTTTTTCTATATAAAAAAA+AGG | + | chr1_2:64645110-64645129 | None:intergenic | 5.0% |
| GGAAGCGAGTTGCGCATATA+AGG | + | chr1_2:64641612-64641631 | None:intergenic | 50.0% | |
| GTCAACTTCCCTGAAGGAGA+GGG | + | chr1_2:64641633-64641652 | None:intergenic | 50.0% | |
| TGTCAACTTCCCTGAAGGAG+AGG | + | chr1_2:64641634-64641653 | None:intergenic | 50.0% | |
| CTCCTTCAGGGAAGTTGACA+TGG | - | chr1_2:64641634-64641653 | Msa0084890:intron | 50.0% | |
| GTCCATGTCAACTTCCCTGA+AGG | + | chr1_2:64641639-64641658 | None:intergenic | 50.0% | |
| TCAGGGAAGTTGACATGGAC+TGG | - | chr1_2:64641639-64641658 | Msa0084890:intron | 50.0% | |
| ATACGTGGTGTGGCTCTTGA+CGG | - | chr1_2:64642427-64642446 | Msa0084890:intron | 50.0% | |
| CTTCAGCAACAGGTTCAGTG+AGG | + | chr1_2:64642474-64642493 | None:intergenic | 50.0% | |
| GCTCCTATTGCTTCAGCAAC+AGG | + | chr1_2:64642484-64642503 | None:intergenic | 50.0% | |
| GGCCTAGAAGTTGTCCACTA+TGG | - | chr1_2:64642955-64642974 | Msa0084890:intron | 50.0% | |
| CCATTCAATAAGTTCGGGGG+GGG | - | chr1_2:64643524-64643543 | Msa0084890:intron | 50.0% | |
| AAATCCCAAACATGAGCCGG+GGG | + | chr1_2:64643673-64643692 | None:intergenic | 50.0% | |
| GCCGACATAGACATTCAGTG+TGG | - | chr1_2:64643731-64643750 | Msa0084890:intron | 50.0% | |
| ATGACGTGGCAACACTTGTC+AGG | + | chr1_2:64643757-64643776 | None:intergenic | 50.0% | |
| TTCACCAATGCTGGTGGTCT+TGG | - | chr1_2:64644327-64644346 | Msa0084890:CDS | 50.0% | |
| TCACCAATGCTGGTGGTCTT+GGG | - | chr1_2:64644328-64644347 | Msa0084890:CDS | 50.0% | |
| AAAGCAGTTCGCAAAGCAGC+TGG | - | chr1_2:64644495-64644514 | Msa0084890:intron | 50.0% | |
| CGCAAAGCAGCTGGAAACAT+AGG | - | chr1_2:64644504-64644523 | Msa0084890:intron | 50.0% | |
| !! | TGATATGGCGGGTCAACGAA+AGG | - | chr1_2:64644574-64644593 | Msa0084890:intron | 50.0% |
| !! | GATATGGCGGGTCAACGAAA+GGG | - | chr1_2:64644575-64644594 | Msa0084890:intron | 50.0% |
| CGAAAGGGTCAAACCCAATC+TGG | - | chr1_2:64644590-64644609 | Msa0084890:intron | 50.0% | |
| AAGGGTCAAACCCAATCTGG+TGG | - | chr1_2:64644593-64644612 | Msa0084890:intron | 50.0% | |
| AGGGTCAAACCCAATCTGGT+GGG | - | chr1_2:64644594-64644613 | Msa0084890:intron | 50.0% | |
| CAAATGGGTCCCACCAGATT+GGG | + | chr1_2:64644606-64644625 | None:intergenic | 50.0% | |
| TGTGAAGGATTGCGACACCA+TGG | + | chr1_2:64644716-64644735 | None:intergenic | 50.0% | |
| TCTGCCCACAGAGAAACCAT+TGG | - | chr1_2:64644955-64644974 | Msa0084890:intron | 50.0% | |
| CCCTCCAATGGTTTCTCTGT+GGG | + | chr1_2:64644962-64644981 | None:intergenic | 50.0% | |
| CCCACAGAGAAACCATTGGA+GGG | - | chr1_2:64644959-64644978 | Msa0084890:intron | 50.0% | |
| ACCCTCCAATGGTTTCTCTG+TGG | + | chr1_2:64644963-64644982 | None:intergenic | 50.0% | |
| !! | CAAAGGTGCTGGAACCTCTT+GGG | - | chr1_2:64645367-64645386 | Msa0084890:CDS | 50.0% |
| !! | AAAGGTGCTGGAACCTCTTG+GGG | - | chr1_2:64645368-64645387 | Msa0084890:CDS | 50.0% |
| CCAGAAGTTATTGCCCCAAG+AGG | + | chr1_2:64645384-64645403 | None:intergenic | 50.0% | |
| CCTCTTGGGGCAATAACTTC+TGG | - | chr1_2:64645381-64645400 | Msa0084890:CDS | 50.0% | |
| TGTCCTCAGGATTGGGGATA+TGG | + | chr1_2:64645520-64645539 | None:intergenic | 50.0% | |
| CTGTCTTGTCCTCAGGATTG+GGG | + | chr1_2:64645526-64645545 | None:intergenic | 50.0% | |
| GCTGTCTTGTCCTCAGGATT+GGG | + | chr1_2:64645527-64645546 | None:intergenic | 50.0% | |
| TGCTGTCTTGTCCTCAGGAT+TGG | + | chr1_2:64645528-64645547 | None:intergenic | 50.0% | |
| GATACTGATGTGGACAGGCA+AGG | - | chr1_2:64645605-64645624 | Msa0084890:intron | 50.0% | |
| TTCTTCTAGATCTGCCGCTG+TGG | - | chr1_2:64645687-64645706 | Msa0084890:CDS | 50.0% | |
| AAACTTCAAGGGAGGAGGGA+GGG | + | chr1_2:64645987-64646006 | None:intergenic | 50.0% | |
| TAAACTTCAAGGGAGGAGGG+AGG | + | chr1_2:64645988-64646007 | None:intergenic | 50.0% | |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr1_2:64646584-64646603 | None:intergenic | 50.0% |
| CTGACAGAACTCTAATGGGG+AGG | - | chr1_2:64646855-64646874 | Msa0084890:intron | 50.0% | |
| TAATGGGGAGGAGTCTCATC+TGG | - | chr1_2:64646867-64646886 | Msa0084890:intron | 50.0% | |
| GCAATTGAAACCAGTGGGCA+TGG | - | chr1_2:64646889-64646908 | Msa0084890:intron | 50.0% | |
| ACGTTGCGTGCTCTTCTATG+AGG | - | chr1_2:64647132-64647151 | Msa0084890:CDS | 50.0% | |
| CTGCACAATGTGTGGTACAC+TGG | + | chr1_2:64647315-64647334 | None:intergenic | 50.0% | |
| CAGTGTACCACACATTGTGC+AGG | - | chr1_2:64647313-64647332 | Msa0084890:intron | 50.0% | |
| CTCAGTTCTGCAGCAAAAGC+TGG | + | chr1_2:64647431-64647450 | None:intergenic | 50.0% | |
| !! | GAGTTTCTGGTTATGGTGGG+TGG | - | chr1_2:64648226-64648245 | Msa0084890:intron | 50.0% |
| GCAGCTGTAAAGGAGTTTGC+AGG | - | chr1_2:64648435-64648454 | Msa0084890:intron | 50.0% | |
| CTCACTCATGAACAGCCACA+TGG | + | chr1_2:64648617-64648636 | None:intergenic | 50.0% | |
| CGCGTTTGAACTTGAAGGCT+CGG | - | chr1_2:64648782-64648801 | Msa0084890:intron | 50.0% | |
| GGGTTGAACTTCACGGTAGT+AGG | + | chr1_2:64648905-64648924 | None:intergenic | 50.0% | |
| GTTGCAGAGCGGAGAAACTG+AGG | + | chr1_2:64640853-64640872 | None:intergenic | 55.0% | |
| AACTCGCTTCCCTCTCCTTC+AGG | - | chr1_2:64641621-64641640 | Msa0084890:intron | 55.0% | |
| ACTCGCTTCCCTCTCCTTCA+GGG | - | chr1_2:64641622-64641641 | Msa0084890:intron | 55.0% | |
| CGGCGTCACAACCGCAATTA+CGG | + | chr1_2:64642263-64642282 | None:intergenic | 55.0% | |
| GTGATGCGCAACCGCAATTG+CGG | + | chr1_2:64642318-64642337 | None:intergenic | 55.0% | |
| ! | TGTGGCTCTTGACGGTGTTG+AGG | - | chr1_2:64642435-64642454 | Msa0084890:intron | 55.0% |
| ! | GTGGCTCTTGACGGTGTTGA+GGG | - | chr1_2:64642436-64642455 | Msa0084890:intron | 55.0% |
| ! | TCTTGACGGTGTTGAGGGAG+AGG | - | chr1_2:64642441-64642460 | Msa0084890:intron | 55.0% |
| ! | CTTGACGGTGTTGAGGGAGA+GGG | - | chr1_2:64642442-64642461 | Msa0084890:intron | 55.0% |
| ! | TTGACGGTGTTGAGGGAGAG+GGG | - | chr1_2:64642443-64642462 | Msa0084890:intron | 55.0% |
| ! | GCAATAGGAGCTGCTTTCGC+CGG | - | chr1_2:64642493-64642512 | Msa0084890:intron | 55.0% |
| TGCTTTCGCCGGATGGTTAG+TGG | - | chr1_2:64642504-64642523 | Msa0084890:intron | 55.0% | |
| TGGCTGATATCCGGGAATCG+TGG | + | chr1_2:64642576-64642595 | None:intergenic | 55.0% | |
| GCGATTTCTCGAGGTCTTGC+TGG | - | chr1_2:64642928-64642947 | Msa0084890:intron | 55.0% | |
| CCCCCCCCGAACTTATTGAA+TGG | + | chr1_2:64643527-64643546 | None:intergenic | 55.0% | |
| AATCCCAAACATGAGCCGGG+GGG | + | chr1_2:64643672-64643691 | None:intergenic | 55.0% | |
| CTTCCCAAGACCACCAGCAT+TGG | + | chr1_2:64644334-64644353 | None:intergenic | 55.0% | |
| GCAAATGGGTCCCACCAGAT+TGG | + | chr1_2:64644607-64644626 | None:intergenic | 55.0% | |
| GCCCACAGAGAAACCATTGG+AGG | - | chr1_2:64644958-64644977 | Msa0084890:intron | 55.0% | |
| GTTGATGCAGGGAATGGAGC+AGG | - | chr1_2:64644995-64645014 | Msa0084890:intron | 55.0% | |
| !! | GCAAAGGTGCTGGAACCTCT+TGG | - | chr1_2:64645366-64645385 | Msa0084890:CDS | 55.0% |
| GTCAATGTCCGTGTCGTGTC+CGG | - | chr1_2:64646650-64646669 | Msa0084890:intron | 55.0% | |
| CTTAAGAGCTCCATGCCCAC+TGG | + | chr1_2:64646902-64646921 | None:intergenic | 55.0% | |
| CAGTGGGCATGGAGCTCTTA+AGG | - | chr1_2:64646900-64646919 | Msa0084890:intron | 55.0% | |
| CTTGCTTCCGCTAGAGCTTC+TGG | - | chr1_2:64647353-64647372 | Msa0084890:intron | 55.0% | |
| TTCCGCTAGAGCTTCTGGTG+TGG | - | chr1_2:64647358-64647377 | Msa0084890:intron | 55.0% | |
| TCCGCTAGAGCTTCTGGTGT+GGG | - | chr1_2:64647359-64647378 | Msa0084890:intron | 55.0% | |
| ! | ACCCACACCAGAAGCTCTAG+CGG | + | chr1_2:64647363-64647382 | None:intergenic | 55.0% |
| !! | AACATAGCAGCAGCGGGTTG+AGG | - | chr1_2:64648545-64648564 | Msa0084890:intron | 55.0% |
| AACTTGAAGGCTCGGCTGAC+AGG | - | chr1_2:64648790-64648809 | Msa0084890:intron | 55.0% | |
| ! | TGACGGTGTTGAGGGAGAGG+GGG | - | chr1_2:64642444-64642463 | Msa0084890:intron | 60.0% |
| ! | TAGGAGCTGCTTTCGCCGGA+TGG | - | chr1_2:64642497-64642516 | Msa0084890:intron | 60.0% |
| TCTCGAGGTCTTGCTGGTGC+CGG | - | chr1_2:64642934-64642953 | Msa0084890:intron | 60.0% | |
| GATGCAGGGAATGGAGCAGG+TGG | - | chr1_2:64644998-64645017 | Msa0084890:intron | 60.0% | |
| !! | TCCTCGGATTAGCCGTGTCC+CGG | - | chr1_2:64646533-64646552 | Msa0084890:intron | 60.0% |
| ! | GATTAGCCGTGTCCCGGTGT+CGG | - | chr1_2:64646539-64646558 | Msa0084890:intron | 60.0% |
| ACACGACACGTGTCCGACAC+CGG | + | chr1_2:64646555-64646574 | None:intergenic | 60.0% | |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr1_2:64646578-64646597 | None:intergenic | 60.0% |
| CACAGACACCGGACACGACA+CGG | + | chr1_2:64646661-64646680 | None:intergenic | 60.0% | |
| GCTAGAGCTTCTGGTGTGGG+TGG | - | chr1_2:64647362-64647381 | Msa0084890:intron | 60.0% | |
| AGAGCTTCTGGTGTGGGTGG+AGG | - | chr1_2:64647365-64647384 | Msa0084890:intron | 60.0% | |
| ! | CTGCAGCAAAAGCTGGCTCC+TGG | + | chr1_2:64647424-64647443 | None:intergenic | 60.0% |
| AAGGCTCGGCTGACAGGATC+TGG | - | chr1_2:64648796-64648815 | Msa0084890:intron | 60.0% | |
| TGGTCCCCCCGGCTCATGTT+TGG | - | chr1_2:64643665-64643684 | Msa0084890:intron | 65.0% | |
| GGTCCCCCCGGCTCATGTTT+GGG | - | chr1_2:64643666-64643685 | Msa0084890:intron | 65.0% | |
| ACCGGGACACGGCTAATCCG+AGG | + | chr1_2:64646537-64646556 | None:intergenic | 65.0% | |
| ACGTGTCCGACACCGGGACA+CGG | + | chr1_2:64646548-64646567 | None:intergenic | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | + | chr1_2:64646554-64646573 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 64640719 | 64649014 | 64640719 | ID=Msa0084890;Name=Msa0084890 |
| chr1_2 | mRNA | 64640719 | 64649014 | 64640719 | ID=Msa0084890-mRNA-1;Parent=Msa0084890;Name=Msa0084890-mRNA-1;_AED=0.11;_eAED=0.11;_QI=173|1|1|1|0.88|0.84|19|429|615 |
| chr1_2 | exon | 64640719 | 64640785 | 64640719 | ID=Msa0084890-mRNA-1:exon:21840;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64640874 | 64641343 | 64640874 | ID=Msa0084890-mRNA-1:exon:21839;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64641434 | 64641511 | 64641434 | ID=Msa0084890-mRNA-1:exon:21838;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64642059 | 64642155 | 64642059 | ID=Msa0084890-mRNA-1:exon:21837;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64642244 | 64642398 | 64642244 | ID=Msa0084890-mRNA-1:exon:21836;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64642776 | 64642871 | 64642776 | ID=Msa0084890-mRNA-1:exon:21835;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64643571 | 64643632 | 64643571 | ID=Msa0084890-mRNA-1:exon:21834;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64643788 | 64643860 | 64643788 | ID=Msa0084890-mRNA-1:exon:21833;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64643956 | 64644037 | 64643956 | ID=Msa0084890-mRNA-1:exon:21832;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64644112 | 64644229 | 64644112 | ID=Msa0084890-mRNA-1:exon:21831;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64644307 | 64644367 | 64644307 | ID=Msa0084890-mRNA-1:exon:21830;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64644703 | 64644767 | 64644703 | ID=Msa0084890-mRNA-1:exon:21829;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64645208 | 64645444 | 64645208 | ID=Msa0084890-mRNA-1:exon:21828;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64645685 | 64645773 | 64645685 | ID=Msa0084890-mRNA-1:exon:21827;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64646756 | 64646808 | 64646756 | ID=Msa0084890-mRNA-1:exon:21826;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64647127 | 64647310 | 64647127 | ID=Msa0084890-mRNA-1:exon:21825;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64647540 | 64647606 | 64647540 | ID=Msa0084890-mRNA-1:exon:21824;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64647995 | 64648210 | 64647995 | ID=Msa0084890-mRNA-1:exon:21823;Parent=Msa0084890-mRNA-1 |
| chr1_2 | exon | 64648835 | 64649014 | 64648835 | ID=Msa0084890-mRNA-1:exon:21822;Parent=Msa0084890-mRNA-1 |
| chr1_2 | five_prime_UTR | 64648842 | 64649014 | 64648842 | ID=Msa0084890-mRNA-1:five_prime_utr;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64648835 | 64648841 | 64648835 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64647995 | 64648210 | 64647995 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64647540 | 64647606 | 64647540 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64647127 | 64647310 | 64647127 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64646756 | 64646808 | 64646756 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64645685 | 64645773 | 64645685 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64645208 | 64645444 | 64645208 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64644703 | 64644767 | 64644703 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64644307 | 64644367 | 64644307 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64644112 | 64644229 | 64644112 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64643956 | 64644037 | 64643956 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64643788 | 64643860 | 64643788 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64643571 | 64643632 | 64643571 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64642776 | 64642871 | 64642776 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64642244 | 64642398 | 64642244 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64642059 | 64642155 | 64642059 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64641434 | 64641511 | 64641434 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | CDS | 64641236 | 64641343 | 64641236 | ID=Msa0084890-mRNA-1:cds;Parent=Msa0084890-mRNA-1 |
| chr1_2 | three_prime_UTR | 64640874 | 64641235 | 64640874 | ID=Msa0084890-mRNA-1:three_prime_utr;Parent=Msa0084890-mRNA-1 |
| chr1_2 | three_prime_UTR | 64640719 | 64640785 | 64640719 | ID=Msa0084890-mRNA-1:three_prime_utr;Parent=Msa0084890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
