AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0116680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116680 MtrunA17_Chr1g0181611 96.558 581 20 0 12 592 6 586 0.0 1110
Msa0116680 MtrunA17_Chr7g0263701 61.426 617 190 7 12 592 6 610 0.0 627
Msa0116680 MtrunA17_Chr4g0030031 44.249 626 287 9 12 589 6 617 1.14e-132 401
Msa0116680 MtrunA17_Chr2g0326021 41.763 431 182 10 197 589 133 532 6.14e-69 232
Msa0116680 MtrunA17_Chr5g0395261 29.304 273 145 9 18 256 38 296 6.26e-14 75.1
Msa0116680 MtrunA17_Chr4g0039981 27.744 328 191 11 12 293 7 334 4.09e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116680 AT2G37080.3 45.984 635 228 14 13 592 7 581 3.28e-143 427
Msa0116680 AT2G37080.1 45.840 637 228 15 13 592 7 583 3.72e-141 422
Msa0116680 AT2G37080.2 45.840 637 228 15 13 592 7 583 3.72e-141 422
Msa0116680 AT5G60210.5 38.599 614 291 12 8 589 26 585 3.75e-102 322
Msa0116680 AT5G60210.3 38.599 614 291 12 8 589 26 585 3.75e-102 322
Msa0116680 AT5G60210.2 38.689 610 288 12 12 589 6 561 2.33e-101 318
Msa0116680 AT5G60210.4 38.689 610 288 12 12 589 6 561 2.33e-101 318
Msa0116680 AT5G60210.1 38.689 610 288 12 12 589 6 561 2.33e-101 318
Msa0116680 AT5G60210.6 38.689 610 288 12 12 589 6 561 2.33e-101 318
Msa0116680 AT3G53350.8 36.810 326 153 11 7 306 12 310 1.33e-43 161
Msa0116680 AT3G53350.8 33.750 320 103 8 281 592 187 405 7.59e-30 122
Msa0116680 AT3G53350.3 37.383 321 148 11 12 306 6 299 3.97e-43 159
Msa0116680 AT3G53350.3 33.438 320 104 8 281 592 176 394 3.65e-30 122
Msa0116680 AT3G53350.2 37.383 321 148 11 12 306 6 299 3.97e-43 159
Msa0116680 AT3G53350.2 33.438 320 104 8 281 592 176 394 3.65e-30 122
Msa0116680 AT3G53350.4 36.585 328 153 12 7 306 12 312 9.49e-42 155
Msa0116680 AT3G53350.4 33.750 320 103 8 281 592 189 407 8.21e-30 122
Msa0116680 AT3G53350.6 36.585 328 153 12 7 306 12 312 9.49e-42 155
Msa0116680 AT3G53350.6 33.750 320 103 8 281 592 189 407 8.21e-30 122
Msa0116680 AT3G53350.7 37.152 323 148 12 12 306 6 301 3.04e-41 154
Msa0116680 AT3G53350.7 33.438 320 104 8 281 592 178 396 4.52e-30 122
Msa0116680 AT3G53350.1 37.152 323 148 12 12 306 6 301 3.04e-41 154
Msa0116680 AT3G53350.1 33.438 320 104 8 281 592 178 396 4.52e-30 122
Msa0116680 AT3G53350.5 37.152 323 148 12 12 306 6 301 3.04e-41 154
Msa0116680 AT3G53350.5 33.438 320 104 8 281 592 178 396 4.52e-30 122
Msa0116680 AT3G53350.9 34.188 351 148 12 12 306 6 329 2.64e-37 144
Msa0116680 AT3G53350.9 33.750 320 103 8 281 592 206 424 2.26e-29 121
Msa0116680 AT1G78430.1 38.418 177 93 4 417 592 162 323 1.67e-21 96.3
Msa0116680 AT1G17140.1 33.632 223 125 10 379 592 135 343 4.49e-14 74.3
Msa0116680 AT1G17140.2 33.632 223 125 10 379 592 135 343 4.49e-14 74.3
Msa0116680 AT5G16730.1 28.721 383 206 14 25 351 24 395 1.60e-11 67.8

Find 132 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAGTGGAGTTAGTTTATT+TGG 0.132345 1_3:-35770445 Msa0116680:five_prime_UTR
AGTCCATTGAATGCTGTTTC+TGG 0.148564 1_3:+35768756 None:intergenic
GGCTACAACAATTCTATTAT+TGG 0.202521 1_3:-35767609 Msa0116680:CDS
GTTATTTCCCTTGATTTAAA+TGG 0.204532 1_3:+35767193 None:intergenic
CTTTGTGTTGACTTGACATT+TGG 0.212610 1_3:+35769300 None:intergenic
ACATTTGGGCTCCTATCTTT+TGG 0.249382 1_3:+35769315 None:intergenic
TGCTGCACAGGCGTCGAATT+TGG 0.249460 1_3:-35767766 Msa0116680:CDS
ACAACAATGTTGAAGAAAAT+TGG 0.253316 1_3:-35767525 Msa0116680:CDS
GGAATCACAGCGGCAACTTC+TGG 0.253438 1_3:-35768870 Msa0116680:CDS
TCTAGAAGAACGGAACAAAT+AGG 0.282502 1_3:-35769045 Msa0116680:intron
AACAAATAGGGTACAAGAAT+TGG 0.301512 1_3:-35769032 Msa0116680:CDS
TTAAAATGTACCTCAGATAT+TGG 0.304349 1_3:+35769276 None:intergenic
ATTTGAAGGAGATTTCTTTC+GGG 0.319999 1_3:+35769419 None:intergenic
TAAGCATGTTGATTGAAATA+TGG 0.322195 1_3:-35769476 Msa0116680:intron
TGAGTTGAAGGCAAGATTAT+TGG 0.325711 1_3:-35768009 Msa0116680:CDS
AATTCGCTCATCTTCAGAAT+TGG 0.329594 1_3:+35768841 None:intergenic
TGGAGCTAGAGGCTGAATTA+AGG 0.329640 1_3:-35767746 Msa0116680:CDS
TTCTAATCTGCAATGTGCTT+TGG 0.333283 1_3:+35768183 None:intergenic
GAGCAAACTTCAGGAGGATT+TGG 0.333490 1_3:-35768366 Msa0116680:CDS
GATTTGAAGGAGATTTCTTT+CGG 0.346603 1_3:+35769418 None:intergenic
ATATATGTATTTAATTTGTT+AGG 0.352600 1_3:-35770469 Msa0116680:five_prime_UTR
GCTGCTGCTATGATTTCTTC+TGG 0.352673 1_3:-35767678 Msa0116680:CDS
AGAGTTAAGGGCACAATTGA+TGG 0.353098 1_3:-35768066 Msa0116680:CDS
TTCTCCAAGGATTGTTTGAA+TGG 0.374694 1_3:+35767320 None:intergenic
CTGACTCAGCATTGTCAATC+CGG 0.380906 1_3:+35768654 None:intergenic
AAGCCGATGTTGAAGAGTTA+AGG 0.383364 1_3:-35768079 Msa0116680:CDS
ATCACCATTCAAACAATCCT+TGG 0.391881 1_3:-35767324 Msa0116680:three_prime_UTR
TTTGTGTTGACTTGACATTT+GGG 0.392895 1_3:+35769301 None:intergenic
CTTTAGAGTTAGAGAAATCA+AGG 0.395892 1_3:-35768418 Msa0116680:CDS
TTTAATTTGTTAGGTGGTAG+TGG 0.397615 1_3:-35770460 Msa0116680:five_prime_UTR
GCTTTGTATTATTATATGTT+GGG 0.405452 1_3:-35767361 Msa0116680:three_prime_UTR
CAAATAAAACTCCAAAAGAT+AGG 0.409278 1_3:-35769326 Msa0116680:CDS
ACATAGTTATACAACCTTGC+AGG 0.410084 1_3:+35767460 None:intergenic
TGCTTTGTATTATTATATGT+TGG 0.411246 1_3:-35767362 Msa0116680:three_prime_UTR
TTGTTCTTCCATTTAAATCA+AGG 0.411443 1_3:-35767201 Msa0116680:three_prime_UTR
GGAACTTGTGAGCAAACTTC+AGG 0.419432 1_3:-35768375 Msa0116680:CDS
TCATCAGTTTCTTCTGCATA+AGG 0.424746 1_3:+35767570 None:intergenic
GAGGATTTGGTCAGTGGAGT+TGG 0.426678 1_3:-35768353 Msa0116680:CDS
ATCTCCTCGCTTACCTGCAT+TGG 0.427114 1_3:-35768327 Msa0116680:CDS
CTAGAAGAACGGAACAAATA+GGG 0.430567 1_3:-35769044 Msa0116680:intron
AGAACTAAGGAAAATTTCTC+AGG 0.434914 1_3:-35768816 Msa0116680:CDS
GTGAGCAGAAATGGTGCATC+AGG 0.435653 1_3:-35769447 Msa0116680:CDS
ACGACTGGAGAACACGAAAT+CGG 0.446862 1_3:-35768150 Msa0116680:CDS
TTGCTTCCGCTGAGGCAGCA+AGG 0.447445 1_3:-35767884 Msa0116680:CDS
GTGGAAACGCTCCGATTAGA+AGG 0.448481 1_3:-35768473 Msa0116680:CDS
ATTATATGTTGGGCGTCCTC+TGG 0.451820 1_3:-35767351 Msa0116680:three_prime_UTR
ATTGTCAATCCGGGTAGCTT+CGG 0.452103 1_3:+35768664 None:intergenic
CGAGCAGTCCGAGGATTTGA+AGG 0.453421 1_3:+35769405 None:intergenic
AGCCGATGTTGAAGAGTTAA+GGG 0.459023 1_3:-35768078 Msa0116680:CDS
TTTATCCATGTCAAGAGAGT+TGG 0.461170 1_3:-35768894 Msa0116680:CDS
GCTCGCAAGACGAAGTCATC+AGG 0.465959 1_3:-35769387 Msa0116680:CDS
GTTTCAGTTAAAGCTGAAGC+AGG 0.470076 1_3:-35768260 Msa0116680:CDS
TAGTACAACTCAAATGCAAT+TGG 0.474267 1_3:-35768513 Msa0116680:CDS
AGAATCTGAATCACAGGCAT+TGG 0.474276 1_3:-35768543 Msa0116680:CDS
ATCCATGTCAAGAGAGTTGG+AGG 0.474312 1_3:-35768891 Msa0116680:CDS
CAGTTACACGTGCTATCATT+CGG 0.476141 1_3:+35767799 None:intergenic
AGCAAGGGCCGCAGAGCGAG+AGG 0.479702 1_3:-35767868 Msa0116680:CDS
TGCTTCCGCTGAGGCAGCAA+GGG 0.480232 1_3:-35767883 Msa0116680:CDS
AGAGAACAATACACTTAAGA+TGG 0.481927 1_3:-35767955 Msa0116680:CDS
CGTGTTCTCCAGTCGTTCAA+AGG 0.483336 1_3:+35768157 None:intergenic
TGTTCTTCCATTTAAATCAA+GGG 0.485276 1_3:-35767200 Msa0116680:three_prime_UTR
TAGAAGTGCCTTTGAACGAC+TGG 0.486503 1_3:-35768165 Msa0116680:CDS
TTTATTTGGAGTTTCTTTGA+AGG 0.489051 1_3:-35770431 Msa0116680:five_prime_UTR
ACTGAAAATGCAACTTGAAA+GGG 0.492360 1_3:-35768696 Msa0116680:CDS
TGGTTGGCTGTGAGCAGAAA+TGG 0.498904 1_3:-35769456 Msa0116680:CDS
CAGACTGCCATTCTCGATCT+CGG 0.499415 1_3:+35768792 None:intergenic
TGCCCTTAACTCTTCAACAT+CGG 0.502854 1_3:+35768076 None:intergenic
AAACAAGCTCGGCTTTGAGC+CGG 0.506146 1_3:+35768279 None:intergenic
TTTCTCTAACTCTAAAGCTA+AGG 0.508714 1_3:+35768424 None:intergenic
AAGACAAGCTGAATTATATG+AGG 0.509050 1_3:-35768117 Msa0116680:CDS
TGCGGCCCTTGCTGCCTCAG+CGG 0.514799 1_3:+35767878 None:intergenic
AGCTTTAACTGAAACAAGCT+CGG 0.514900 1_3:+35768268 None:intergenic
TTATTTGGAGTTTCTTTGAA+GGG 0.515755 1_3:-35770430 Msa0116680:five_prime_UTR
TAGAAAGCGAGGAGATAAAC+CGG 0.516380 1_3:-35768298 Msa0116680:CDS
TAGTGATGTGGCTGAGTTGA+AGG 0.519057 1_3:-35768021 Msa0116680:CDS
CTCAGGACCGAGATCGAGAA+TGG 0.519589 1_3:-35768799 Msa0116680:CDS
CTTTCTACAACTTCCAATGC+AGG 0.520191 1_3:+35768314 None:intergenic
AACTGAAAATGCAACTTGAA+AGG 0.523112 1_3:-35768697 Msa0116680:CDS
CTTCAGGAGGATTTGGTCAG+TGG 0.532629 1_3:-35768359 Msa0116680:CDS
ATGAGCGAATTCAAGAACTA+AGG 0.533335 1_3:-35768829 Msa0116680:CDS
AGGCTGAAGATGCAAAGAAT+CGG 0.535803 1_3:-35768919 Msa0116680:CDS
CACGTGAATCCGAAGCTACC+CGG 0.535832 1_3:-35768673 Msa0116680:CDS
TATGTATTTAATTTGTTAGG+TGG 0.535888 1_3:-35770466 Msa0116680:five_prime_UTR
GAAGAATAAAATCACGGATG+AGG 0.536894 1_3:-35767910 Msa0116680:CDS
TGAAAGTTCAGTCAGATCAA+TGG 0.538570 1_3:-35767719 Msa0116680:CDS
GTTAAGGCAAATATTCTCCA+AGG 0.538590 1_3:+35767307 None:intergenic
AGAAATCTCCTTCAAATCCT+CGG 0.539368 1_3:-35769413 Msa0116680:CDS
CTAACTCTAAAGCTAAGGAT+TGG 0.544112 1_3:+35768429 None:intergenic
ATTTCTTCTGGAAACAACAA+TGG 0.545987 1_3:-35767666 Msa0116680:CDS
TTGTAGAGAATCTGAATCAC+AGG 0.546987 1_3:-35768549 Msa0116680:CDS
TTATTTGCTGGGTTTGAAGA+CGG 0.550271 1_3:+35769342 None:intergenic
AAGGTCTCAAGTAAACTCAC+TGG 0.551394 1_3:-35768399 Msa0116680:CDS
TGAGGAGTTAGATGCTGCAC+AGG 0.555058 1_3:-35767778 Msa0116680:CDS
TTTGTCTACCTCTAGAAGAA+CGG 0.558111 1_3:-35769055 Msa0116680:intron
TGTCCAGAAACAGCATTCAA+TGG 0.563463 1_3:-35768759 Msa0116680:CDS
ATCTGCATTGGATGCTGCCG+AGG 0.566446 1_3:-35768228 Msa0116680:CDS
TAAGATGGAAATAAAGAGAG+AGG 0.579267 1_3:-35767940 Msa0116680:CDS
TGACTCAGCATTGTCAATCC+GGG 0.580031 1_3:+35768655 None:intergenic
AGGGCAGTTAAAATCTGCAT+TGG 0.583728 1_3:-35768240 Msa0116680:CDS
TGAAGAAAATTGGAGTGTTG+TGG 0.584300 1_3:-35767515 Msa0116680:CDS
CATGTTGATTGAAATATGGT+TGG 0.585700 1_3:-35769472 Msa0116680:CDS
ATGCTGAGATTCAAGACTTG+AGG 0.592935 1_3:-35768628 Msa0116680:CDS
TTCGTCTTGCGAGCAGTCCG+AGG 0.602923 1_3:+35769396 None:intergenic
GTTAAAGCATTTACTCGACA+TGG 0.603434 1_3:+35767406 None:intergenic
GTTAGAGAAGAATAAAATCA+CGG 0.606698 1_3:-35767916 Msa0116680:CDS
TTCCTCCAACTCTCTTGACA+TGG 0.607195 1_3:+35768889 None:intergenic
GGGTACAAGAATTGGAGTCT+CGG 0.608303 1_3:-35769024 Msa0116680:CDS
CTTTGAAGGGATATTATATG+CGG 0.608432 1_3:-35770417 Msa0116680:intron
GGCGTCGAATTTGGAGCTAG+AGG 0.618660 1_3:-35767757 Msa0116680:CDS
GTGATTCAGATTCTCTACAA+TGG 0.621611 1_3:+35768552 None:intergenic
CTCGTTCTGATATCTTACCT+CGG 0.626347 1_3:+35768211 None:intergenic
AGAATGGCAGTCTGAACTAG+AGG 0.628151 1_3:-35768783 Msa0116680:CDS
ACTTGTGAGCAAACTTCAGG+AGG 0.628772 1_3:-35768372 Msa0116680:CDS
TTTGAAGGAGATTTCTTTCG+GGG 0.632584 1_3:+35769420 None:intergenic
ACTTCCAATGCAGGTAAGCG+AGG 0.632899 1_3:+35768323 None:intergenic
GTCTCAAGTAAACTCACTGG+AGG 0.639006 1_3:-35768396 Msa0116680:CDS
TGAGGCTGTTGCTTCCGCTG+AGG 0.639415 1_3:-35767892 Msa0116680:CDS
GAAGATAAAAGCTCAACATG+AGG 0.639716 1_3:-35768939 Msa0116680:CDS
TGAGATTCAAGACTTGAGGA+TGG 0.640348 1_3:-35768624 Msa0116680:CDS
TTTCAGTTAAAGCTGAAGCA+GGG 0.641574 1_3:-35768259 Msa0116680:CDS
AACACAAAGTCCAATATCTG+AGG 0.651330 1_3:-35769286 Msa0116680:intron
ATAGATATATGCAACCTGCA+AGG 0.662046 1_3:-35767474 Msa0116680:three_prime_UTR
AAGTTCAGTCAGATCAATGG+AGG 0.671435 1_3:-35767716 Msa0116680:CDS
AATGATAGCACGTGTAACTG+AGG 0.673722 1_3:-35767796 Msa0116680:CDS
ATTGGAAGTTGTAGAAAGCG+AGG 0.674711 1_3:-35768309 Msa0116680:CDS
TGGGTTTGAAGACGGCGAAG+CGG 0.677416 1_3:+35769350 None:intergenic
TTGAATGGTGATCAAACCAG+AGG 0.679765 1_3:+35767335 None:intergenic
GGAAGCTGCAAATAAGACAG+TGG 0.693575 1_3:-35768492 Msa0116680:CDS
TGTCAAAGCCTCTCGCTCTG+CGG 0.698809 1_3:+35767860 None:intergenic
AGAACTGGTTCACTTGACAG+TGG 0.718014 1_3:-35767630 Msa0116680:CDS
TCATTTGCAAGATAGTGATG+TGG 0.731331 1_3:-35768033 Msa0116680:CDS
GAGAGTTGGAGGAATCACAG+CGG 0.814737 1_3:-35768880 Msa0116680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAAAAAAATACTAATTTTT+TGG - chr1_3:35767211-35767230 Msa0116680:three_prime_UTR 10.0%
!!! ATATATGTATTTAATTTGTT+AGG - chr1_3:35767269-35767288 Msa0116680:three_prime_UTR 10.0%
!!! TTCAGATTTTTTTAAAAAAA+AGG + chr1_3:35767711-35767730 None:intergenic 10.0%
!! AAATTATACATTCCATTTAA+TGG + chr1_3:35767883-35767902 None:intergenic 15.0%
!! TGTAAAAAAAAATGTAAAAC+AGG + chr1_3:35770512-35770531 None:intergenic 15.0%
!!! TATGTATTTAATTTGTTAGG+TGG - chr1_3:35767272-35767291 Msa0116680:three_prime_UTR 20.0%
!! AATATCTAGGTGATAAAAAA+GGG + chr1_3:35767522-35767541 None:intergenic 20.0%
!! TAATATCTAGGTGATAAAAA+AGG + chr1_3:35767523-35767542 None:intergenic 20.0%
!! TGGTTGTACTATAATTTATA+AGG - chr1_3:35767679-35767698 Msa0116680:CDS 20.0%
!! AAACAATTGTAAACATTTCT+GGG - chr1_3:35767826-35767845 Msa0116680:CDS 20.0%
!!! ATTATTTCTTCAGATTTCTT+TGG + chr1_3:35767921-35767940 None:intergenic 20.0%
!!! TTTTCTTATAAGTAGTGAAT+AGG + chr1_3:35767978-35767997 None:intergenic 20.0%
!! TCCTGTTTATGAAAAATATT+TGG - chr1_3:35768030-35768049 Msa0116680:CDS 20.0%
!! AAACAACAATGGAAAAATTA+TGG - chr1_3:35770083-35770102 Msa0116680:intron 20.0%
!!! ATTGTTGTATTTTTCTTCTT+AGG + chr1_3:35770201-35770220 None:intergenic 20.0%
!! TGCTTTGTATTATTATATGT+TGG - chr1_3:35770376-35770395 Msa0116680:intron 20.0%
!! GCTTTGTATTATTATATGTT+GGG - chr1_3:35770377-35770396 Msa0116680:intron 20.0%
!! TTTATTTGGAGTTTCTTTGA+AGG - chr1_3:35767307-35767326 Msa0116680:three_prime_UTR 25.0%
!! TTATTTGGAGTTTCTTTGAA+GGG - chr1_3:35767308-35767327 Msa0116680:three_prime_UTR 25.0%
! ATTAGATTATATGACCACAT+TGG + chr1_3:35767374-35767393 None:intergenic 25.0%
! TATATAATTTGACTGAAGAC+AGG + chr1_3:35767614-35767633 None:intergenic 25.0%
! TGTCTTCAGTCAAATTATAT+AGG - chr1_3:35767613-35767632 Msa0116680:CDS 25.0%
! GTCTTCAGTCAAATTATATA+GGG - chr1_3:35767614-35767633 Msa0116680:CDS 25.0%
! AATTATATAGGGTCTAAATG+AGG - chr1_3:35767625-35767644 Msa0116680:CDS 25.0%
! ATTATATAGGGTCTAAATGA+GGG - chr1_3:35767626-35767645 Msa0116680:CDS 25.0%
!!! TTGCTCTTATTTTATTCAGT+AGG - chr1_3:35767654-35767673 Msa0116680:CDS 25.0%
!!! CTTATTTTATTCAGTAGGTT+TGG - chr1_3:35767659-35767678 Msa0116680:CDS 25.0%
! TCAATTCCATGAATACAAAT+AGG + chr1_3:35767746-35767765 None:intergenic 25.0%
! CAAACAATTGTAAACATTTC+TGG - chr1_3:35767825-35767844 Msa0116680:CDS 25.0%
! TCACTACTTATAAGAAAACT+AGG - chr1_3:35767980-35767999 Msa0116680:CDS 25.0%
!! GCCAAATATTTTTCATAAAC+AGG + chr1_3:35768034-35768053 None:intergenic 25.0%
!! AATATTGTCGTTTCATAGAA+GGG + chr1_3:35768067-35768086 None:intergenic 25.0%
!! AAATATTGTCGTTTCATAGA+AGG + chr1_3:35768068-35768087 None:intergenic 25.0%
!! TCTATGAAACGACAATATTT+TGG - chr1_3:35768068-35768087 Msa0116680:CDS 25.0%
!! CTATGAAACGACAATATTTT+GGG - chr1_3:35768069-35768088 Msa0116680:CDS 25.0%
! ATCTACACAAGAAAAGTTAT+AGG + chr1_3:35768121-35768140 None:intergenic 25.0%
! TGCAAATTTCTTGAATAGAA+TGG + chr1_3:35768145-35768164 None:intergenic 25.0%
! AATTTACACATATCACAATG+AGG + chr1_3:35768205-35768224 None:intergenic 25.0%
!! TAAGCATGTTGATTGAAATA+TGG - chr1_3:35768262-35768281 Msa0116680:CDS 25.0%
! CAAATAAAACTCCAAAAGAT+AGG - chr1_3:35768412-35768431 Msa0116680:CDS 25.0%
! TTAAAATGTACCTCAGATAT+TGG + chr1_3:35768465-35768484 None:intergenic 25.0%
! GAAATTACCAATAATCACAA+TGG + chr1_3:35768513-35768532 None:intergenic 25.0%
!! TGTGATTATTGGTAATTTCA+TGG - chr1_3:35768514-35768533 Msa0116680:CDS 25.0%
! GGAATAAATAACTAGATACT+TGG - chr1_3:35768544-35768563 Msa0116680:CDS 25.0%
! AATTGCAAAGATGAAAAATG+AGG - chr1_3:35769159-35769178 Msa0116680:intron 25.0%
! GTTAGAGAAGAATAAAATCA+CGG - chr1_3:35769822-35769841 Msa0116680:intron 25.0%
! ACAACAATGTTGAAGAAAAT+TGG - chr1_3:35770213-35770232 Msa0116680:intron 25.0%
!! TTTGTGACACTATTTTGTTA+AGG + chr1_3:35770450-35770469 None:intergenic 25.0%
! TTGTTCTTCCATTTAAATCA+AGG - chr1_3:35770537-35770556 Msa0116680:five_prime_UTR 25.0%
! TGTTCTTCCATTTAAATCAA+GGG - chr1_3:35770538-35770557 Msa0116680:five_prime_UTR 25.0%
!! GTTATTTCCCTTGATTTAAA+TGG + chr1_3:35770548-35770567 None:intergenic 25.0%
!! TTTAATTTGTTAGGTGGTAG+TGG - chr1_3:35767278-35767297 Msa0116680:three_prime_UTR 30.0%
! CTTTGAAGGGATATTATATG+CGG - chr1_3:35767321-35767340 Msa0116680:three_prime_UTR 30.0%
! TGTTTGTTGAACTTGAATCA+AGG - chr1_3:35767346-35767365 Msa0116680:three_prime_UTR 30.0%
ATTGATATTGCAGGAATTGT+GGG - chr1_3:35767464-35767483 Msa0116680:three_prime_UTR 30.0%
TGTCTGCATGTTTAATATCT+AGG + chr1_3:35767535-35767554 None:intergenic 30.0%
! ATGCTGCAAAAGTATGAAAT+AGG + chr1_3:35767579-35767598 None:intergenic 30.0%
TTTGAGCCTATTTGTATTCA+TGG - chr1_3:35767737-35767756 Msa0116680:CDS 30.0%
ACTCCTTGTAAGTCATATTT+CGG - chr1_3:35767778-35767797 Msa0116680:CDS 30.0%
TTACCGAAATATGACTTACA+AGG + chr1_3:35767784-35767803 None:intergenic 30.0%
TTACCACAATATGATTCATC+AGG + chr1_3:35767949-35767968 None:intergenic 30.0%
!! GGATTGTCTTGTTTCTTTAT+TGG - chr1_3:35768094-35768113 Msa0116680:CDS 30.0%
! CATGTTGATTGAAATATGGT+TGG - chr1_3:35768266-35768285 Msa0116680:CDS 30.0%
ATTTGAAGGAGATTTCTTTC+GGG + chr1_3:35768322-35768341 None:intergenic 30.0%
GATTTGAAGGAGATTTCTTT+CGG + chr1_3:35768323-35768342 None:intergenic 30.0%
!!! CTTTTGGAGTTTTATTTGCT+GGG + chr1_3:35768410-35768429 None:intergenic 30.0%
!!! TCTTTTGGAGTTTTATTTGC+TGG + chr1_3:35768411-35768430 None:intergenic 30.0%
!! TTTGTGTTGACTTGACATTT+GGG + chr1_3:35768440-35768459 None:intergenic 30.0%
!! TTAGATTTTGCTATGCATAG+AGG + chr1_3:35768602-35768621 None:intergenic 30.0%
AACAAATAGGGTACAAGAAT+TGG - chr1_3:35768706-35768725 Msa0116680:CDS 30.0%
! AGCTTTTATCTTCAATGACT+CGG + chr1_3:35768792-35768811 None:intergenic 30.0%
AGAACTAAGGAAAATTTCTC+AGG - chr1_3:35768922-35768941 Msa0116680:CDS 30.0%
AACTGAAAATGCAACTTGAA+AGG - chr1_3:35769041-35769060 Msa0116680:CDS 30.0%
ACTGAAAATGCAACTTGAAA+GGG - chr1_3:35769042-35769061 Msa0116680:CDS 30.0%
TAGTACAACTCAAATGCAAT+TGG - chr1_3:35769225-35769244 Msa0116680:intron 30.0%
!! TTTCTCTAACTCTAAAGCTA+AGG + chr1_3:35769317-35769336 None:intergenic 30.0%
!! CTTTAGAGTTAGAGAAATCA+AGG - chr1_3:35769320-35769339 Msa0116680:CDS 30.0%
AAGACAAGCTGAATTATATG+AGG - chr1_3:35769621-35769640 Msa0116680:intron 30.0%
AGAGAACAATACACTTAAGA+TGG - chr1_3:35769783-35769802 Msa0116680:intron 30.0%
TAAGATGGAAATAAAGAGAG+AGG - chr1_3:35769798-35769817 Msa0116680:intron 30.0%
! ATTTCTTCTGGAAACAACAA+TGG - chr1_3:35770072-35770091 Msa0116680:intron 30.0%
GGCTACAACAATTCTATTAT+TGG - chr1_3:35770129-35770148 Msa0116680:intron 30.0%
!!! TACATTGTTTTGATCGCATT+TGG - chr1_3:35770481-35770500 Msa0116680:five_prime_UTR 30.0%
!! GGTAGTGGAGTTAGTTTATT+TGG - chr1_3:35767293-35767312 Msa0116680:three_prime_UTR 35.0%
! CTTTTGCAGATTGATATTGC+AGG - chr1_3:35767455-35767474 Msa0116680:three_prime_UTR 35.0%
GATTGATATTGCAGGAATTG+TGG - chr1_3:35767463-35767482 Msa0116680:three_prime_UTR 35.0%
TCTAGGTGATAAAAAAGGGA+AGG + chr1_3:35767518-35767537 None:intergenic 35.0%
!! ACATTTCTGGGATCTAATTG+AGG - chr1_3:35767838-35767857 Msa0116680:CDS 35.0%
! CATTCCATTTAATGGACCAA+AGG + chr1_3:35767875-35767894 None:intergenic 35.0%
TGTCCTGATGAATCATATTG+TGG - chr1_3:35767943-35767962 Msa0116680:CDS 35.0%
!! GAAACGACAATATTTTGGGA+AGG - chr1_3:35768073-35768092 Msa0116680:CDS 35.0%
TTTGAAGGAGATTTCTTTCG+GGG + chr1_3:35768321-35768340 None:intergenic 35.0%
AGAAATCTCCTTCAAATCCT+CGG - chr1_3:35768325-35768344 Msa0116680:CDS 35.0%
! TTATTTGCTGGGTTTGAAGA+CGG + chr1_3:35768399-35768418 None:intergenic 35.0%
!! CTTTGTGTTGACTTGACATT+TGG + chr1_3:35768441-35768460 None:intergenic 35.0%
AACACAAAGTCCAATATCTG+AGG - chr1_3:35768452-35768471 Msa0116680:CDS 35.0%
GTTCCTATAAGACTTACCTT+TGG - chr1_3:35768485-35768504 Msa0116680:CDS 35.0%
AATAATCACAATGGCACCAA+AGG + chr1_3:35768504-35768523 None:intergenic 35.0%
!! TTTGGTGCCATTGTGATTAT+TGG - chr1_3:35768503-35768522 Msa0116680:CDS 35.0%
TGGTAATTTCATGGATGCAT+TGG - chr1_3:35768523-35768542 Msa0116680:CDS 35.0%
TAGAGGCAATATGTTCATGA+AGG + chr1_3:35768585-35768604 None:intergenic 35.0%
AGAGGTAGACAAAAATGTCA+AGG + chr1_3:35768676-35768695 None:intergenic 35.0%
! TTTGTCTACCTCTAGAAGAA+CGG - chr1_3:35768683-35768702 Msa0116680:CDS 35.0%
TATTTGTTCCGTTCTTCTAG+AGG + chr1_3:35768694-35768713 None:intergenic 35.0%
TCTAGAAGAACGGAACAAAT+AGG - chr1_3:35768693-35768712 Msa0116680:CDS 35.0%
CTAGAAGAACGGAACAAATA+GGG - chr1_3:35768694-35768713 Msa0116680:CDS 35.0%
GAAGATAAAAGCTCAACATG+AGG - chr1_3:35768799-35768818 Msa0116680:CDS 35.0%
TTTATCCATGTCAAGAGAGT+TGG - chr1_3:35768844-35768863 Msa0116680:CDS 35.0%
AATTCGCTCATCTTCAGAAT+TGG + chr1_3:35768900-35768919 None:intergenic 35.0%
ATGAGCGAATTCAAGAACTA+AGG - chr1_3:35768909-35768928 Msa0116680:CDS 35.0%
! CAAGTTGCATTTTCAGTTTC+TGG + chr1_3:35769039-35769058 None:intergenic 35.0%
GTGATTCAGATTCTCTACAA+TGG + chr1_3:35769189-35769208 None:intergenic 35.0%
TTGTAGAGAATCTGAATCAC+AGG - chr1_3:35769189-35769208 Msa0116680:intron 35.0%
!! CTAACTCTAAAGCTAAGGAT+TGG + chr1_3:35769312-35769331 None:intergenic 35.0%
! AGCTTTAACTGAAACAAGCT+CGG + chr1_3:35769473-35769492 None:intergenic 35.0%
TTTCAGTTAAAGCTGAAGCA+GGG - chr1_3:35769479-35769498 Msa0116680:intron 35.0%
TTCTAATCTGCAATGTGCTT+TGG + chr1_3:35769558-35769577 None:intergenic 35.0%
TCATTTGCAAGATAGTGATG+TGG - chr1_3:35769705-35769724 Msa0116680:intron 35.0%
! TGAGTTGAAGGCAAGATTAT+TGG - chr1_3:35769729-35769748 Msa0116680:intron 35.0%
GAAGAATAAAATCACGGATG+AGG - chr1_3:35769828-35769847 Msa0116680:intron 35.0%
TGAAAGTTCAGTCAGATCAA+TGG - chr1_3:35770019-35770038 Msa0116680:intron 35.0%
GGAAAAATTATGGAGAGAAC+TGG - chr1_3:35770093-35770112 Msa0116680:intron 35.0%
TCATCAGTTTCTTCTGCATA+AGG + chr1_3:35770171-35770190 None:intergenic 35.0%
!! TGAAGAAAATTGGAGTGTTG+TGG - chr1_3:35770223-35770242 Msa0116680:intron 35.0%
ATAGATATATGCAACCTGCA+AGG - chr1_3:35770264-35770283 Msa0116680:intron 35.0%
ACATAGTTATACAACCTTGC+AGG + chr1_3:35770281-35770300 None:intergenic 35.0%
! GTTAAAGCATTTACTCGACA+TGG + chr1_3:35770335-35770354 None:intergenic 35.0%
ATCACCATTCAAACAATCCT+TGG - chr1_3:35770414-35770433 Msa0116680:intron 35.0%
TTCTCCAAGGATTGTTTGAA+TGG + chr1_3:35770421-35770440 None:intergenic 35.0%
GTTAAGGCAAATATTCTCCA+AGG + chr1_3:35770434-35770453 None:intergenic 35.0%
CTTGAATCAAGGATCCAATG+TGG - chr1_3:35767357-35767376 Msa0116680:three_prime_UTR 40.0%
ACATGCAGACACAAAAAGCA+AGG - chr1_3:35767544-35767563 Msa0116680:CDS 40.0%
CAGACACAAAAAGCAAGGTA+AGG - chr1_3:35767549-35767568 Msa0116680:CDS 40.0%
TGAGGTATGAATGCTACCTT+TGG - chr1_3:35767856-35767875 Msa0116680:CDS 40.0%
GCTACCTTTGGTCCATTAAA+TGG - chr1_3:35767868-35767887 Msa0116680:CDS 40.0%
ACTAGGCTTCTATGCATCAA+TGG - chr1_3:35767997-35768016 Msa0116680:CDS 40.0%
! ACATTTGGGCTCCTATCTTT+TGG + chr1_3:35768426-35768445 None:intergenic 40.0%
! GCACCAAAGGTAAGTCTTAT+AGG + chr1_3:35768491-35768510 None:intergenic 40.0%
AGGCTGAAGATGCAAAGAAT+CGG - chr1_3:35768819-35768838 Msa0116680:CDS 40.0%
TGTCCAGAAACAGCATTCAA+TGG - chr1_3:35768979-35768998 Msa0116680:CDS 40.0%
!! AGTCCATTGAATGCTGTTTC+TGG + chr1_3:35768985-35769004 None:intergenic 40.0%
ATGCTGAGATTCAAGACTTG+AGG - chr1_3:35769110-35769129 Msa0116680:intron 40.0%
TGAGATTCAAGACTTGAGGA+TGG - chr1_3:35769114-35769133 Msa0116680:intron 40.0%
AGAATCTGAATCACAGGCAT+TGG - chr1_3:35769195-35769214 Msa0116680:intron 40.0%
! ACGCTTTTGCACCTTCTAAT+CGG + chr1_3:35769279-35769298 None:intergenic 40.0%
AAGGTCTCAAGTAAACTCAC+TGG - chr1_3:35769339-35769358 Msa0116680:CDS 40.0%
CTTTCTACAACTTCCAATGC+AGG + chr1_3:35769427-35769446 None:intergenic 40.0%
ATTGGAAGTTGTAGAAAGCG+AGG - chr1_3:35769429-35769448 Msa0116680:CDS 40.0%
TAGAAAGCGAGGAGATAAAC+CGG - chr1_3:35769440-35769459 Msa0116680:CDS 40.0%
GTTTCAGTTAAAGCTGAAGC+AGG - chr1_3:35769478-35769497 Msa0116680:intron 40.0%
AGGGCAGTTAAAATCTGCAT+TGG - chr1_3:35769498-35769517 Msa0116680:intron 40.0%
CTCGTTCTGATATCTTACCT+CGG + chr1_3:35769530-35769549 None:intergenic 40.0%
AAGCCGATGTTGAAGAGTTA+AGG - chr1_3:35769659-35769678 Msa0116680:intron 40.0%
AGCCGATGTTGAAGAGTTAA+GGG - chr1_3:35769660-35769679 Msa0116680:intron 40.0%
TGCCCTTAACTCTTCAACAT+CGG + chr1_3:35769665-35769684 None:intergenic 40.0%
! AGAGTTAAGGGCACAATTGA+TGG - chr1_3:35769672-35769691 Msa0116680:intron 40.0%
CAGTTACACGTGCTATCATT+CGG + chr1_3:35769942-35769961 None:intergenic 40.0%
AATGATAGCACGTGTAACTG+AGG - chr1_3:35769942-35769961 Msa0116680:intron 40.0%
AAGTTCAGTCAGATCAATGG+AGG - chr1_3:35770022-35770041 Msa0116680:intron 40.0%
TTGAATGGTGATCAAACCAG+AGG + chr1_3:35770406-35770425 None:intergenic 40.0%
TATTGCAGGAATTGTGGGTC+AGG - chr1_3:35767469-35767488 Msa0116680:three_prime_UTR 45.0%
ATTGCAGGAATTGTGGGTCA+GGG - chr1_3:35767470-35767489 Msa0116680:three_prime_UTR 45.0%
GGGTACAAGAATTGGAGTCT+CGG - chr1_3:35768714-35768733 Msa0116680:CDS 45.0%
ATCCATGTCAAGAGAGTTGG+AGG - chr1_3:35768847-35768866 Msa0116680:CDS 45.0%
TTCCTCCAACTCTCTTGACA+TGG + chr1_3:35768852-35768871 None:intergenic 45.0%
AGAATGGCAGTCTGAACTAG+AGG - chr1_3:35768955-35768974 Msa0116680:CDS 45.0%
ATTGTCAATCCGGGTAGCTT+CGG + chr1_3:35769077-35769096 None:intergenic 45.0%
TGACTCAGCATTGTCAATCC+GGG + chr1_3:35769086-35769105 None:intergenic 45.0%
CTGACTCAGCATTGTCAATC+CGG + chr1_3:35769087-35769106 None:intergenic 45.0%
GGAAGCTGCAAATAAGACAG+TGG - chr1_3:35769246-35769265 Msa0116680:intron 45.0%
GTCTCAAGTAAACTCACTGG+AGG - chr1_3:35769342-35769361 Msa0116680:CDS 45.0%
GGAACTTGTGAGCAAACTTC+AGG - chr1_3:35769363-35769382 Msa0116680:CDS 45.0%
ACTTGTGAGCAAACTTCAGG+AGG - chr1_3:35769366-35769385 Msa0116680:CDS 45.0%
GAGCAAACTTCAGGAGGATT+TGG - chr1_3:35769372-35769391 Msa0116680:CDS 45.0%
!! TAGAAGTGCCTTTGAACGAC+TGG - chr1_3:35769573-35769592 Msa0116680:intron 45.0%
ACGACTGGAGAACACGAAAT+CGG - chr1_3:35769588-35769607 Msa0116680:intron 45.0%
! TAGTGATGTGGCTGAGTTGA+AGG - chr1_3:35769717-35769736 Msa0116680:intron 45.0%
TGGAGCTAGAGGCTGAATTA+AGG - chr1_3:35769992-35770011 Msa0116680:intron 45.0%
GCTGCTGCTATGATTTCTTC+TGG - chr1_3:35770060-35770079 Msa0116680:intron 45.0%
! AGAACTGGTTCACTTGACAG+TGG - chr1_3:35770108-35770127 Msa0116680:intron 45.0%
ATTATATGTTGGGCGTCCTC+TGG - chr1_3:35770387-35770406 Msa0116680:intron 45.0%
TTGCAGGAATTGTGGGTCAG+GGG - chr1_3:35767471-35767490 Msa0116680:three_prime_UTR 50.0%
! TGGTTGGCTGTGAGCAGAAA+TGG - chr1_3:35768282-35768301 Msa0116680:CDS 50.0%
GTGAGCAGAAATGGTGCATC+AGG - chr1_3:35768291-35768310 Msa0116680:CDS 50.0%
GAGAGTTGGAGGAATCACAG+CGG - chr1_3:35768858-35768877 Msa0116680:CDS 50.0%
CAGACTGCCATTCTCGATCT+CGG + chr1_3:35768949-35768968 None:intergenic 50.0%
GTGGAAACGCTCCGATTAGA+AGG - chr1_3:35769265-35769284 Msa0116680:intron 50.0%
! CTTCAGGAGGATTTGGTCAG+TGG - chr1_3:35769379-35769398 Msa0116680:CDS 50.0%
! GAGGATTTGGTCAGTGGAGT+TGG - chr1_3:35769385-35769404 Msa0116680:CDS 50.0%
ATCTCCTCGCTTACCTGCAT+TGG - chr1_3:35769411-35769430 Msa0116680:CDS 50.0%
ACTTCCAATGCAGGTAAGCG+AGG + chr1_3:35769418-35769437 None:intergenic 50.0%
!! AAACAAGCTCGGCTTTGAGC+CGG + chr1_3:35769462-35769481 None:intergenic 50.0%
CGTGTTCTCCAGTCGTTCAA+AGG + chr1_3:35769584-35769603 None:intergenic 50.0%
TGAGGAGTTAGATGCTGCAC+AGG - chr1_3:35769960-35769979 Msa0116680:intron 50.0%
CGAGCAGTCCGAGGATTTGA+AGG + chr1_3:35768336-35768355 None:intergenic 55.0%
GCTCGCAAGACGAAGTCATC+AGG - chr1_3:35768351-35768370 Msa0116680:CDS 55.0%
TGGGTTTGAAGACGGCGAAG+CGG + chr1_3:35768391-35768410 None:intergenic 55.0%
GGAATCACAGCGGCAACTTC+TGG - chr1_3:35768868-35768887 Msa0116680:CDS 55.0%
CTCAGGACCGAGATCGAGAA+TGG - chr1_3:35768939-35768958 Msa0116680:CDS 55.0%
CACGTGAATCCGAAGCTACC+CGG - chr1_3:35769065-35769084 Msa0116680:intron 55.0%
ATCTGCATTGGATGCTGCCG+AGG - chr1_3:35769510-35769529 Msa0116680:intron 55.0%
TGTCAAAGCCTCTCGCTCTG+CGG + chr1_3:35769881-35769900 None:intergenic 55.0%
!! TGCTGCACAGGCGTCGAATT+TGG - chr1_3:35769972-35769991 Msa0116680:intron 55.0%
! GGCGTCGAATTTGGAGCTAG+AGG - chr1_3:35769981-35770000 Msa0116680:intron 55.0%
TTCGTCTTGCGAGCAGTCCG+AGG + chr1_3:35768345-35768364 None:intergenic 60.0%
! TGAGGCTGTTGCTTCCGCTG+AGG - chr1_3:35769846-35769865 Msa0116680:intron 60.0%
TTGCTTCCGCTGAGGCAGCA+AGG - chr1_3:35769854-35769873 Msa0116680:intron 60.0%
TGCTTCCGCTGAGGCAGCAA+GGG - chr1_3:35769855-35769874 Msa0116680:intron 60.0%
TGCGGCCCTTGCTGCCTCAG+CGG + chr1_3:35769863-35769882 None:intergenic 70.0%
AGCAAGGGCCGCAGAGCGAG+AGG - chr1_3:35769870-35769889 Msa0116680:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 35767184 35770576 35767184 ID=Msa0116680;Name=Msa0116680
chr1_3 mRNA 35767184 35770576 35767184 ID=Msa0116680-mRNA-1;Parent=Msa0116680;Name=Msa0116680-mRNA-1;_AED=0.09;_eAED=0.09;_QI=154|0.5|0.66|1|0.5|0.66|3|313|592
chr1_3 exon 35767184 35769062 35767184 ID=Msa0116680-mRNA-1:exon:11565;Parent=Msa0116680-mRNA-1
chr1_3 exon 35769287 35769494 35769287 ID=Msa0116680-mRNA-1:exon:11564;Parent=Msa0116680-mRNA-1
chr1_3 exon 35770418 35770576 35770418 ID=Msa0116680-mRNA-1:exon:11563;Parent=Msa0116680-mRNA-1
chr1_3 five_prime_UTR 35770423 35770576 35770423 ID=Msa0116680-mRNA-1:five_prime_utr;Parent=Msa0116680-mRNA-1
chr1_3 CDS 35770418 35770422 35770418 ID=Msa0116680-mRNA-1:cds;Parent=Msa0116680-mRNA-1
chr1_3 CDS 35769287 35769494 35769287 ID=Msa0116680-mRNA-1:cds;Parent=Msa0116680-mRNA-1
chr1_3 CDS 35767497 35769062 35767497 ID=Msa0116680-mRNA-1:cds;Parent=Msa0116680-mRNA-1
chr1_3 three_prime_UTR 35767184 35767496 35767184 ID=Msa0116680-mRNA-1:three_prime_utr;Parent=Msa0116680-mRNA-1
Gene Sequence

>Msa0116680

ATGCGCATGTTGATTGAAATATGGTTGGCTGTGAGCAGAAATGGTGCATCAGGAGTGCCCCGAAAGAAATCTCCTTCAAATCCTCGGACTGCTCGCAAGACGAAGTCATCAGGATCTGATTCTAACTCCGCTTCGCCGTCTTCAAACCCAGCAAATAAAACTCCAAAAGATAGGAGCCCAAATGTCAAGTCAACACAAAGTCCAATATCTGAGAAGAACGGAACAAATAGGGTACAAGAATTGGAGTCTCGGCTATCTCAACTTGAAGAAGATCTAAAGAAAGCTAAAGAACAACTTAACTCATCCGAGTCATTGAAGATAAAAGCTCAACATGAGGCTGAAGATGCAAAGAATCGGCTTTTATCCATGTCAAGAGAGTTGGAGGAATCACAGCGGCAACTTCTGGAACTATCCAATTCTGAAGATGAGCGAATTCAAGAACTAAGGAAAATTTCTCAGGACCGAGATCGAGAATGGCAGTCTGAACTAGAGGCTGTCCAGAAACAGCATTCAATGGACTCAGCTGCTTTAGCATCTGCAATGAATGAAGTCCAGAAACTGAAAATGCAACTTGAAAGGGCACGTGAATCCGAAGCTACCCGGATTGACAATGCTGAGTCAGCTGATGCTGAGATTCAAGACTTGAGGATGGAGCTTGATGAAACACTCTCTTTAATTGCAAAGATGAAAAATGAGGTGAGCCATTGTAGAGAATCTGAATCACAGGCATTGGAAACAGTTAGTACAACTCAAATGCAATTGGAAGCTGCAAATAAGACAGTGGAAACGCTCCGATTAGAAGGTGCAAAAGCGTCAGAAGATTACCAATCCTTAGCTTTAGAGTTAGAGAAATCAAGGTCTCAAGTAAACTCACTGGAGGAACTTGTGAGCAAACTTCAGGAGGATTTGGTCAGTGGAGTTGGTTTATCTCCTCGCTTACCTGCATTGGAAGTTGTAGAAAGCGAGGAGATAAACCGGCTCAAAGCCGAGCTTGTTTCAGTTAAAGCTGAAGCAGGGCAGTTAAAATCTGCATTGGATGCTGCCGAGGTAAGATATCAGAACGAGTATATCCAAAGCACATTGCAGATTAGAAGTGCCTTTGAACGACTGGAGAACACGAAATCGGAATCTTATCAAAGACAAGCTGAATTATATGAGGAATTGAAGAAATCTAAAGCCGATGTTGAAGAGTTAAGGGCACAATTGATGGAAAAAGAATCTCATTTGCAAGATAGTGATGTGGCTGAGTTGAAGGCAAGATTATTGGAGAGAGAGACAAAACTACAAAATATAACTGAAGAGAACAATACACTTAAGATGGAAATAAAGAGAGAGGAGTTAGAGAAGAATAAAATCACGGATGAGGCTGTTGCTTCCGCTGAGGCAGCAAGGGCCGCAGAGCGAGAGGCTTTGACAAAACTCAGCTACATAACAGAAGAAGCTGATGAAAGTAACCGAATGATAGCACGTGTAACTGAGGAGTTAGATGCTGCACAGGCGTCGAATTTGGAGCTAGAGGCTGAATTAAGGAGATTGAAAGTTCAGTCAGATCAATGGAGGAAAGCAGCTGAAGCAGCTGCTGCTATGATTTCTTCTGGAAACAACAATGGAAAAATTATGGAGAGAACTGGTTCACTTGACAGTGGCTACAACAATTCTATTATTGGTAACAAGATGAGTTCGCCTTATGCAGAAGAAACTGATGATGACTCACCTAAGAAGAAAAATACAACAATGTTGAAGAAAATTGGAGTGTTGTGGAAGAAGAATCATCAATAG
Protein sequence

>Msa0116680

MRMLIEIWLAVSRNGASGVPRKKSPSNPRTARKTKSSGSDSNSASPSSNPANKTPKDRSPNVKSTQSPISEKNGTNRVQELESRLSQLEEDLKKAKEQLNSSESLKIKAQHEAEDAKNRLLSMSRELEESQRQLLELSNSEDERIQELRKISQDRDREWQSELEAVQKQHSMDSAALASAMNEVQKLKMQLERARESEATRIDNAESADAEIQDLRMELDETLSLIAKMKNEVSHCRESESQALETVSTTQMQLEAANKTVETLRLEGAKASEDYQSLALELEKSRSQVNSLEELVSKLQEDLVSGVGLSPRLPALEVVESEEINRLKAELVSVKAEAGQLKSALDAAEVRYQNEYIQSTLQIRSAFERLENTKSESYQRQAELYEELKKSKADVEELRAQLMEKESHLQDSDVAELKARLLERETKLQNITEENNTLKMEIKREELEKNKITDEAVASAEAARAAEREALTKLSYITEEADESNRMIARVTEELDAAQASNLELEAELRRLKVQSDQWRKAAEAAAAMISSGNNNGKIMERTGSLDSGYNNSIIGNKMSSPYAEETDDDSPKKKNTTMLKKIGVLWKKNHQ*