Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432500 | XP_013468526.1 | 94.144 | 666 | 39 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432500 | sp|Q58G01|LHWL3_ARATH | 40.479 | 751 | 323 | 21 | 1 | 662 | 1 | 716 | 2.36e-145 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432500 | A0A072VMB0 | 94.144 | 666 | 39 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1432500 | 0.845427 | 4.088193e-59 | -8.615850e-47 |
| Msa0002580 | Msa1432500 | 0.808210 | 3.463473e-50 | -8.615850e-47 |
| Msa0005890 | Msa1432500 | 0.808692 | 2.733510e-50 | -8.615850e-47 |
| Msa0014570 | Msa1432500 | 0.808644 | 2.798238e-50 | -8.615850e-47 |
| Msa0024550 | Msa1432500 | 0.814128 | 1.803797e-51 | -8.615850e-47 |
| Msa0027820 | Msa1432500 | 0.938987 | 2.705137e-99 | -8.615850e-47 |
| Msa0032920 | Msa1432500 | -0.824124 | 9.566460e-54 | -8.615850e-47 |
| Msa0032960 | Msa1432500 | -0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa0036830 | Msa1432500 | 0.800109 | 1.681199e-48 | -8.615850e-47 |
| Msa0061340 | Msa1432500 | 0.802124 | 6.509848e-49 | -8.615850e-47 |
| Msa0063890 | Msa1432500 | 0.812393 | 4.337549e-51 | -8.615850e-47 |
| Msa0071880 | Msa1432500 | 0.803005 | 4.285090e-49 | -8.615850e-47 |
| Msa0081520 | Msa1432500 | 0.857401 | 1.674036e-62 | -8.615850e-47 |
| Msa0089980 | Msa1432500 | 0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0090010 | Msa1432500 | 0.800362 | 1.493345e-48 | -8.615850e-47 |
| Msa0093850 | Msa1432500 | 0.823527 | 1.319993e-53 | -8.615850e-47 |
| Msa0094780 | Msa1432500 | 0.805779 | 1.132045e-49 | -8.615850e-47 |
| Msa0094850 | Msa1432500 | 0.803961 | 2.715264e-49 | -8.615850e-47 |
| Msa0098040 | Msa1432500 | 0.816654 | 4.946667e-52 | -8.615850e-47 |
| Msa0101440 | Msa1432500 | 0.813396 | 2.614107e-51 | -8.615850e-47 |
| Msa0116680 | Msa1432500 | 0.810788 | 9.684663e-51 | -8.615850e-47 |
| Msa0120400 | Msa1432500 | 0.813002 | 3.190434e-51 | -8.615850e-47 |
| Msa1346560 | Msa1432500 | 0.833057 | 6.637435e-56 | -8.615850e-47 |
| Msa1348090 | Msa1432500 | 0.827012 | 1.978363e-54 | -8.615850e-47 |
| Msa1356830 | Msa1432500 | 0.842976 | 1.860968e-58 | -8.615850e-47 |
| Msa1371520 | Msa1432500 | 0.810982 | 8.791583e-51 | -8.615850e-47 |
| Msa1371910 | Msa1432500 | 0.818803 | 1.620077e-52 | -8.615850e-47 |
| Msa1375280 | Msa1432500 | 0.835053 | 2.099221e-56 | -8.615850e-47 |
| Msa1385890 | Msa1432500 | 0.813579 | 2.383797e-51 | -8.615850e-47 |
| Msa1386710 | Msa1432500 | 0.801603 | 8.330471e-49 | -8.615850e-47 |
| Msa1387620 | Msa1432500 | 0.808944 | 2.414062e-50 | -8.615850e-47 |
| Msa1387870 | Msa1432500 | 0.810885 | 9.227126e-51 | -8.615850e-47 |
| Msa1409330 | Msa1432500 | 0.805010 | 1.640925e-49 | -8.615850e-47 |
| Msa1412000 | Msa1432500 | 0.833431 | 5.355939e-56 | -8.615850e-47 |
| Msa1415540 | Msa1432500 | 0.810837 | 9.449858e-51 | -8.615850e-47 |
| Msa1418090 | Msa1432500 | 0.809095 | 2.241590e-50 | -8.615850e-47 |
| Msa1419370 | Msa1432500 | 0.816026 | 6.836160e-52 | -8.615850e-47 |
| Msa1425880 | Msa1432500 | 0.820991 | 5.119184e-53 | -8.615850e-47 |
| Msa1432500 | Msa1437940 | 0.839676 | 1.374470e-57 | -8.615850e-47 |
| Msa1432500 | Msa1439610 | 0.815480 | 9.046035e-52 | -8.615850e-47 |
| Msa1432500 | Msa1440310 | 0.804992 | 1.655118e-49 | -8.615850e-47 |
| Msa1432500 | Msa1440960 | 0.862671 | 4.295337e-64 | -8.615850e-47 |
| Msa1432500 | Msa1444510 | 0.808681 | 2.748667e-50 | -8.615850e-47 |
| Msa1432500 | Msa1445190 | 0.802867 | 4.574899e-49 | -8.615850e-47 |
| Msa1432500 | Msa1449480 | 0.801590 | 8.382086e-49 | -8.615850e-47 |
| Msa1432500 | Msa1450100 | 0.801991 | 6.933092e-49 | -8.615850e-47 |
| Msa1432500 | Msa1454140 | 0.801648 | 8.153752e-49 | -8.615850e-47 |
| Msa1432500 | Msa1464810 | 0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa0611210 | Msa1432500 | 0.860539 | 1.924692e-63 | -8.615850e-47 |
| Msa0614000 | Msa1432500 | 0.823436 | 1.386834e-53 | -8.615850e-47 |
| Msa0626450 | Msa1432500 | 0.870969 | 9.764499e-67 | -8.615850e-47 |
| Msa0626490 | Msa1432500 | 0.870558 | 1.332655e-66 | -8.615850e-47 |
| Msa0626510 | Msa1432500 | 0.803037 | 4.219532e-49 | -8.615850e-47 |
| Msa0638480 | Msa1432500 | 0.824939 | 6.150327e-54 | -8.615850e-47 |
| Msa0651550 | Msa1432500 | 0.869938 | 2.127404e-66 | -8.615850e-47 |
| Msa0652770 | Msa1432500 | 0.823027 | 1.727213e-53 | -8.615850e-47 |
| Msa0660370 | Msa1432500 | 0.838786 | 2.338495e-57 | -8.615850e-47 |
| Msa0661790 | Msa1432500 | 0.808427 | 3.113686e-50 | -8.615850e-47 |
| Msa0664600 | Msa1432500 | 0.867880 | 9.871491e-66 | -8.615850e-47 |
| Msa0683570 | Msa1432500 | 0.800099 | 1.689693e-48 | -8.615850e-47 |
| Msa0693070 | Msa1432500 | 0.802084 | 6.635900e-49 | -8.615850e-47 |
| Msa0693330 | Msa1432500 | 0.810860 | 9.340588e-51 | -8.615850e-47 |
| Msa0693890 | Msa1432500 | 0.805795 | 1.123386e-49 | -8.615850e-47 |
| Msa0695270 | Msa1432500 | 0.810837 | 9.451101e-51 | -8.615850e-47 |
| Msa0697160 | Msa1432500 | 0.804314 | 2.292746e-49 | -8.615850e-47 |
| Msa0702720 | Msa1432500 | 0.800557 | 1.362660e-48 | -8.615850e-47 |
| Msa0709410 | Msa1432500 | 0.804269 | 2.342523e-49 | -8.615850e-47 |
| Msa0711400 | Msa1432500 | 0.809199 | 2.129669e-50 | -8.615850e-47 |
| Msa0711430 | Msa1432500 | 0.803550 | 3.304523e-49 | -8.615850e-47 |
| Msa0715060 | Msa1432500 | 0.804692 | 1.912415e-49 | -8.615850e-47 |
| Msa0725000 | Msa1432500 | 0.824851 | 6.451186e-54 | -8.615850e-47 |
| Msa0725770 | Msa1432500 | 0.808080 | 3.692141e-50 | -8.615850e-47 |
| Msa0727640 | Msa1432500 | 0.829917 | 3.934923e-55 | -8.615850e-47 |
| Msa0729100 | Msa1432500 | 0.813783 | 2.149003e-51 | -8.615850e-47 |
| Msa0729270 | Msa1432500 | 0.808594 | 2.868434e-50 | -8.615850e-47 |
| Msa0741220 | Msa1432500 | 0.817814 | 2.713458e-52 | -8.615850e-47 |
| Msa0742740 | Msa1432500 | 0.838535 | 2.715198e-57 | -8.615850e-47 |
| Msa0751260 | Msa1432500 | 0.811210 | 7.847627e-51 | -8.615850e-47 |
| Msa0762910 | Msa1432500 | 0.810716 | 1.003780e-50 | -8.615850e-47 |
| Msa0765270 | Msa1432500 | 0.810001 | 1.432049e-50 | -8.615850e-47 |
| Msa0766930 | Msa1432500 | 0.811282 | 7.569645e-51 | -8.615850e-47 |
| Msa0768990 | Msa1432500 | 0.827948 | 1.179646e-54 | -8.615850e-47 |
| Msa0770330 | Msa1432500 | 0.810103 | 1.361342e-50 | -8.615850e-47 |
| Msa0770720 | Msa1432500 | 0.803373 | 3.596065e-49 | -8.615850e-47 |
| Msa0779870 | Msa1432500 | 0.803962 | 2.713589e-49 | -8.615850e-47 |
| Msa0780270 | Msa1432500 | 0.813226 | 2.849110e-51 | -8.615850e-47 |
| Msa0783530 | Msa1432500 | 0.806521 | 7.901114e-50 | -8.615850e-47 |
| Msa0792370 | Msa1432500 | 0.800785 | 1.224243e-48 | -8.615850e-47 |
| Msa0795870 | Msa1432500 | 0.822165 | 2.740577e-53 | -8.615850e-47 |
| Msa0805330 | Msa1432500 | 0.826849 | 2.164754e-54 | -8.615850e-47 |
| Msa0807280 | Msa1432500 | 0.822540 | 2.242810e-53 | -8.615850e-47 |
| Msa0807820 | Msa1432500 | 0.836684 | 8.098395e-57 | -8.615850e-47 |
| Msa0819170 | Msa1432500 | 0.834801 | 2.429416e-56 | -8.615850e-47 |
| Msa0821780 | Msa1432500 | 0.818471 | 1.927017e-52 | -8.615850e-47 |
| Msa0823820 | Msa1432500 | 0.844597 | 6.849999e-59 | -8.615850e-47 |
| Msa0829300 | Msa1432500 | 0.841708 | 4.034337e-58 | -8.615850e-47 |
| Msa0829330 | Msa1432500 | 0.845188 | 4.746968e-59 | -8.615850e-47 |
| Msa0832120 | Msa1432500 | 0.814688 | 1.356432e-51 | -8.615850e-47 |
| Msa0833530 | Msa1432500 | 0.833971 | 3.924974e-56 | -8.615850e-47 |
| Msa0833650 | Msa1432500 | 0.818175 | 2.248521e-52 | -8.615850e-47 |
| Msa0123340 | Msa1432500 | 0.930603 | 1.288196e-93 | -8.615850e-47 |
| Msa0129940 | Msa1432500 | 0.812139 | 4.927301e-51 | -8.615850e-47 |
| Msa0130110 | Msa1432500 | 0.807894 | 4.044667e-50 | -8.615850e-47 |
| Msa0131900 | Msa1432500 | 0.807797 | 4.240719e-50 | -8.615850e-47 |
| Msa0136650 | Msa1432500 | 0.866029 | 3.842829e-65 | -8.615850e-47 |
| Msa0138360 | Msa1432500 | 0.805270 | 1.447367e-49 | -8.615850e-47 |
| Msa0152400 | Msa1432500 | 0.805420 | 1.346399e-49 | -8.615850e-47 |
| Msa0154440 | Msa1432500 | 0.822511 | 2.278026e-53 | -8.615850e-47 |
| Msa0168070 | Msa1432500 | 0.900606 | 6.190328e-78 | -8.615850e-47 |
| Msa0173540 | Msa1432500 | 0.807765 | 4.307885e-50 | -8.615850e-47 |
| Msa0173890 | Msa1432500 | 0.854045 | 1.598689e-61 | -8.615850e-47 |
| Msa0174450 | Msa1432500 | 0.885202 | 9.965053e-72 | -8.615850e-47 |
| Msa0175730 | Msa1432500 | 0.810806 | 9.596883e-51 | -8.615850e-47 |
| Msa0211140 | Msa1432500 | 0.807919 | 3.994107e-50 | -8.615850e-47 |
| Msa0211150 | Msa1432500 | 0.810347 | 1.205824e-50 | -8.615850e-47 |
| Msa0221000 | Msa1432500 | 0.870840 | 1.076587e-66 | -8.615850e-47 |
| Msa0222560 | Msa1432500 | 0.804311 | 2.296298e-49 | -8.615850e-47 |
| Msa0225100 | Msa1432500 | 0.868116 | 8.290715e-66 | -8.615850e-47 |
| Msa0225860 | Msa1432500 | 0.822027 | 2.950908e-53 | -8.615850e-47 |
| Msa0231200 | Msa1432500 | 0.805555 | 1.261574e-49 | -8.615850e-47 |
| Msa1225860 | Msa1432500 | -0.812129 | 4.951037e-51 | -8.615850e-47 |
| Msa1227940 | Msa1432500 | 0.804879 | 1.747278e-49 | -8.615850e-47 |
| Msa1228200 | Msa1432500 | 0.827046 | 1.941965e-54 | -8.615850e-47 |
| Msa1229500 | Msa1432500 | 0.806571 | 7.711333e-50 | -8.615850e-47 |
| Msa1238820 | Msa1432500 | 0.815391 | 9.471822e-52 | -8.615850e-47 |
| Msa1252200 | Msa1432500 | 0.812153 | 4.892819e-51 | -8.615850e-47 |
| Msa1256850 | Msa1432500 | 0.801420 | 9.082667e-49 | -8.615850e-47 |
| Msa1263490 | Msa1432500 | 0.813362 | 2.659264e-51 | -8.615850e-47 |
| Msa1265650 | Msa1432500 | 0.807394 | 5.165540e-50 | -8.615850e-47 |
| Msa1267770 | Msa1432500 | 0.818745 | 1.669534e-52 | -8.615850e-47 |
| Msa1269890 | Msa1432500 | 0.817743 | 2.815157e-52 | -8.615850e-47 |
| Msa1271270 | Msa1432500 | 0.804157 | 2.471838e-49 | -8.615850e-47 |
| Msa1271990 | Msa1432500 | 0.810894 | 9.183615e-51 | -8.615850e-47 |
| Msa1276660 | Msa1432500 | 0.824721 | 6.921927e-54 | -8.615850e-47 |
| Msa1277220 | Msa1432500 | 0.815957 | 7.084255e-52 | -8.615850e-47 |
| Msa1297230 | Msa1432500 | 0.851792 | 7.045093e-61 | -8.615850e-47 |
| Msa1297970 | Msa1432500 | 0.802732 | 4.878770e-49 | -8.615850e-47 |
| Msa1298370 | Msa1432500 | 0.811143 | 8.111321e-51 | -8.615850e-47 |
| Msa1298810 | Msa1432500 | 0.804758 | 1.852422e-49 | -8.615850e-47 |
| Msa1303560 | Msa1432500 | 0.809721 | 1.644835e-50 | -8.615850e-47 |
| Msa1303650 | Msa1432500 | 0.807348 | 5.281422e-50 | -8.615850e-47 |
| Msa1306640 | Msa1432500 | 0.821948 | 3.077346e-53 | -8.615850e-47 |
| Msa1314650 | Msa1432500 | 0.804918 | 1.714960e-49 | -8.615850e-47 |
| Msa1320670 | Msa1432500 | 0.811313 | 7.451562e-51 | -8.615850e-47 |
| Msa1330420 | Msa1432500 | 0.832280 | 1.034156e-55 | -8.615850e-47 |
| Msa1343430 | Msa1432500 | 0.815457 | 9.153957e-52 | -8.615850e-47 |
| Msa0365100 | Msa1432500 | 0.817715 | 2.856519e-52 | -8.615850e-47 |
| Msa0367870 | Msa1432500 | 0.845024 | 5.256839e-59 | -8.615850e-47 |
| Msa0369790 | Msa1432500 | 0.829051 | 6.389986e-55 | -8.615850e-47 |
| Msa0376350 | Msa1432500 | 0.800933 | 1.142344e-48 | -8.615850e-47 |
| Msa0376630 | Msa1432500 | 0.847718 | 9.687318e-60 | -8.615850e-47 |
| Msa0378720 | Msa1432500 | 0.886201 | 4.203851e-72 | -8.615850e-47 |
| Msa0380620 | Msa1432500 | 0.859525 | 3.893875e-63 | -8.615850e-47 |
| Msa0386850 | Msa1432500 | 0.805660 | 1.198919e-49 | -8.615850e-47 |
| Msa0388770 | Msa1432500 | 0.813074 | 3.075963e-51 | -8.615850e-47 |
| Msa0417880 | Msa1432500 | 0.812262 | 4.632807e-51 | -8.615850e-47 |
| Msa0424160 | Msa1432500 | 0.810981 | 8.794414e-51 | -8.615850e-47 |
| Msa0427100 | Msa1432500 | 0.822386 | 2.435373e-53 | -8.615850e-47 |
| Msa0427120 | Msa1432500 | 0.826266 | 2.980430e-54 | -8.615850e-47 |
| Msa0428370 | Msa1432500 | 0.849129 | 3.942996e-60 | -8.615850e-47 |
| Msa0428920 | Msa1432500 | 0.805539 | 1.271591e-49 | -8.615850e-47 |
| Msa0430260 | Msa1432500 | 0.868567 | 5.932924e-66 | -8.615850e-47 |
| Msa0436910 | Msa1432500 | 0.808158 | 3.553443e-50 | -8.615850e-47 |
| Msa0451070 | Msa1432500 | 0.813207 | 2.876269e-51 | -8.615850e-47 |
| Msa0460590 | Msa1432500 | 0.816391 | 5.666220e-52 | -8.615850e-47 |
| Msa0464000 | Msa1432500 | 0.825396 | 4.795840e-54 | -8.615850e-47 |
| Msa0464680 | Msa1432500 | 0.812152 | 4.894989e-51 | -8.615850e-47 |
| Msa0467430 | Msa1432500 | 0.815505 | 8.933241e-52 | -8.615850e-47 |
| Msa0467490 | Msa1432500 | 0.810306 | 1.230622e-50 | -8.615850e-47 |
| Msa0474730 | Msa1432500 | 0.888556 | 5.317905e-73 | -8.615850e-47 |
| Msa0479170 | Msa1432500 | 0.831470 | 1.639671e-55 | -8.615850e-47 |
| Msa0479200 | Msa1432500 | 0.829478 | 5.032682e-55 | -8.615850e-47 |
| Msa0980140 | Msa1432500 | 0.822512 | 2.276492e-53 | -8.615850e-47 |
| Msa0981320 | Msa1432500 | 0.801496 | 8.762003e-49 | -8.615850e-47 |
| Msa0982650 | Msa1432500 | 0.827395 | 1.601852e-54 | -8.615850e-47 |
| Msa1004800 | Msa1432500 | 0.806153 | 9.444667e-50 | -8.615850e-47 |
| Msa1004970 | Msa1432500 | 0.800232 | 1.586958e-48 | -8.615850e-47 |
| Msa1011530 | Msa1432500 | 0.803520 | 3.352509e-49 | -8.615850e-47 |
| Msa1019430 | Msa1432500 | 0.802230 | 6.190652e-49 | -8.615850e-47 |
| Msa1019470 | Msa1432500 | 0.802939 | 4.422271e-49 | -8.615850e-47 |
| Msa1020480 | Msa1432500 | 0.822131 | 2.790500e-53 | -8.615850e-47 |
| Msa1020510 | Msa1432500 | 0.852084 | 5.822855e-61 | -8.615850e-47 |
| Msa1020630 | Msa1432500 | 0.814897 | 1.219333e-51 | -8.615850e-47 |
| Msa1020670 | Msa1432500 | 0.826219 | 3.058176e-54 | -8.615850e-47 |
| Msa1023500 | Msa1432500 | 0.817226 | 3.680188e-52 | -8.615850e-47 |
| Msa1023570 | Msa1432500 | 0.804181 | 2.443920e-49 | -8.615850e-47 |
| Msa1028280 | Msa1432500 | 0.810030 | 1.411625e-50 | -8.615850e-47 |
| Msa1031930 | Msa1432500 | 0.825206 | 5.318749e-54 | -8.615850e-47 |
| Msa1034500 | Msa1432500 | 0.807790 | 4.254424e-50 | -8.615850e-47 |
| Msa1035960 | Msa1432500 | 0.809292 | 2.033647e-50 | -8.615850e-47 |
| Msa1043370 | Msa1432500 | 0.811495 | 6.804725e-51 | -8.615850e-47 |
| Msa1044680 | Msa1432500 | 0.805478 | 1.309480e-49 | -8.615850e-47 |
| Msa1045140 | Msa1432500 | 0.806446 | 8.194132e-50 | -8.615850e-47 |
| Msa1050910 | Msa1432500 | 0.819524 | 1.110346e-52 | -8.615850e-47 |
| Msa1065390 | Msa1432500 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa1071770 | Msa1432500 | 0.812045 | 5.165669e-51 | -8.615850e-47 |
| Msa1072940 | Msa1432500 | 0.821629 | 3.647799e-53 | -8.615850e-47 |
| Msa1085330 | Msa1432500 | 0.809118 | 2.216323e-50 | -8.615850e-47 |
| Msa0240900 | Msa1432500 | 0.805400 | 1.359559e-49 | -8.615850e-47 |
| Msa0244640 | Msa1432500 | 0.849131 | 3.938123e-60 | -8.615850e-47 |
| Msa0251710 | Msa1432500 | 0.830442 | 2.930391e-55 | -8.615850e-47 |
| Msa0265850 | Msa1432500 | 0.838530 | 2.722622e-57 | -8.615850e-47 |
| Msa0266180 | Msa1432500 | 0.866907 | 2.022716e-65 | -8.615850e-47 |
| Msa0266350 | Msa1432500 | 0.805426 | 1.342313e-49 | -8.615850e-47 |
| Msa0267920 | Msa1432500 | 0.837774 | 4.262491e-57 | -8.615850e-47 |
| Msa0277450 | Msa1432500 | 0.806123 | 9.581948e-50 | -8.615850e-47 |
| Msa0283330 | Msa1432500 | 0.846629 | 1.925746e-59 | -8.615850e-47 |
| Msa0287740 | Msa1432500 | 0.856145 | 3.921127e-62 | -8.615850e-47 |
| Msa0290720 | Msa1432500 | 0.825753 | 3.947416e-54 | -8.615850e-47 |
| Msa0292400 | Msa1432500 | 0.827819 | 1.267445e-54 | -8.615850e-47 |
| Msa0297790 | Msa1432500 | 0.809509 | 1.826737e-50 | -8.615850e-47 |
| Msa0300270 | Msa1432500 | 0.858993 | 5.624074e-63 | -8.615850e-47 |
| Msa0300320 | Msa1432500 | 0.848060 | 7.793584e-60 | -8.615850e-47 |
| Msa0307270 | Msa1432500 | 0.834047 | 3.756060e-56 | -8.615850e-47 |
| Msa0307670 | Msa1432500 | 0.806588 | 7.649045e-50 | -8.615850e-47 |
| Msa0315690 | Msa1432500 | 0.805131 | 1.548272e-49 | -8.615850e-47 |
| Msa0317970 | Msa1432500 | 0.802561 | 5.291378e-49 | -8.615850e-47 |
| Msa0320660 | Msa1432500 | 0.801119 | 1.046527e-48 | -8.615850e-47 |
| Msa0321620 | Msa1432500 | 0.851389 | 9.160563e-61 | -8.615850e-47 |
| Msa0323270 | Msa1432500 | 0.812531 | 4.045481e-51 | -8.615850e-47 |
| Msa0326590 | Msa1432500 | 0.812073 | 5.093818e-51 | -8.615850e-47 |
| Msa0335800 | Msa1432500 | 0.806826 | 6.811529e-50 | -8.615850e-47 |
| Msa0337700 | Msa1432500 | 0.863699 | 2.066518e-64 | -8.615850e-47 |
| Msa0340500 | Msa1432500 | 0.811277 | 7.588193e-51 | -8.615850e-47 |
| Msa0341690 | Msa1432500 | 0.827986 | 1.155399e-54 | -8.615850e-47 |
| Msa0342010 | Msa1432500 | 0.817777 | 2.765852e-52 | -8.615850e-47 |
| Msa0357990 | Msa1432500 | 0.811570 | 6.552985e-51 | -8.615850e-47 |
| Msa0358890 | Msa1432500 | 0.805000 | 1.648690e-49 | -8.615850e-47 |
| Msa0363200 | Msa1432500 | 0.815675 | 8.187702e-52 | -8.615850e-47 |
| Msa1112380 | Msa1432500 | 0.802186 | 6.322303e-49 | -8.615850e-47 |
| Msa1113340 | Msa1432500 | 0.834510 | 2.875197e-56 | -8.615850e-47 |
| Msa1113800 | Msa1432500 | 0.829924 | 3.921114e-55 | -8.615850e-47 |
| Msa1118600 | Msa1432500 | 0.810386 | 1.182727e-50 | -8.615850e-47 |
| Msa1124950 | Msa1432500 | 0.848178 | 7.234546e-60 | -8.615850e-47 |
| Msa1130890 | Msa1432500 | 0.811915 | 5.512652e-51 | -8.615850e-47 |
| Msa1132840 | Msa1432500 | 0.823198 | 1.575681e-53 | -8.615850e-47 |
| Msa1140210 | Msa1432500 | 0.806215 | 9.166992e-50 | -8.615850e-47 |
| Msa1140220 | Msa1432500 | 0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa1145810 | Msa1432500 | 0.810211 | 1.290141e-50 | -8.615850e-47 |
| Msa1150820 | Msa1432500 | 0.806751 | 7.066384e-50 | -8.615850e-47 |
| Msa1155170 | Msa1432500 | -0.816680 | 4.881706e-52 | -8.615850e-47 |
| Msa1158830 | Msa1432500 | 0.812010 | 5.257790e-51 | -8.615850e-47 |
| Msa1160500 | Msa1432500 | 0.842955 | 1.884928e-58 | -8.615850e-47 |
| Msa1160920 | Msa1432500 | 0.826949 | 2.049061e-54 | -8.615850e-47 |
| Msa1167330 | Msa1432500 | 0.825255 | 5.177876e-54 | -8.615850e-47 |
| Msa1184330 | Msa1432500 | 0.805332 | 1.404885e-49 | -8.615850e-47 |
| Msa1186020 | Msa1432500 | 0.811449 | 6.961863e-51 | -8.615850e-47 |
| Msa1205280 | Msa1432500 | 0.814680 | 1.362053e-51 | -8.615850e-47 |
| Msa1206230 | Msa1432500 | 0.809698 | 1.663685e-50 | -8.615850e-47 |
| Msa1208950 | Msa1432500 | 0.803022 | 4.251438e-49 | -8.615850e-47 |
| Msa1209420 | Msa1432500 | 0.818945 | 1.503832e-52 | -8.615850e-47 |
| Msa1209450 | Msa1432500 | 0.812741 | 3.639970e-51 | -8.615850e-47 |
| Msa1209460 | Msa1432500 | 0.800050 | 1.728585e-48 | -8.615850e-47 |
| Msa1219500 | Msa1432500 | 0.807924 | 3.984735e-50 | -8.615850e-47 |
| Msa0483100 | Msa1432500 | 0.807367 | 5.232972e-50 | -8.615850e-47 |
| Msa0488790 | Msa1432500 | 0.806716 | 7.184627e-50 | -8.615850e-47 |
| Msa0498060 | Msa1432500 | 0.808892 | 2.477430e-50 | -8.615850e-47 |
| Msa0498450 | Msa1432500 | 0.814538 | 1.464002e-51 | -8.615850e-47 |
| Msa0500380 | Msa1432500 | 0.860448 | 2.050609e-63 | -8.615850e-47 |
| Msa0509550 | Msa1432500 | 0.827413 | 1.586621e-54 | -8.615850e-47 |
| Msa0513160 | Msa1432500 | 0.803904 | 2.790289e-49 | -8.615850e-47 |
| Msa0519820 | Msa1432500 | 0.803679 | 3.107328e-49 | -8.615850e-47 |
| Msa0527190 | Msa1432500 | 0.811714 | 6.098535e-51 | -8.615850e-47 |
| Msa0528570 | Msa1432500 | 0.820714 | 5.928370e-53 | -8.615850e-47 |
| Msa0529030 | Msa1432500 | 0.802446 | 5.589579e-49 | -8.615850e-47 |
| Msa0548470 | Msa1432500 | 0.800995 | 1.109474e-48 | -8.615850e-47 |
| Msa0557460 | Msa1432500 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
| Msa0574390 | Msa1432500 | 0.806254 | 8.994325e-50 | -8.615850e-47 |
| Msa0580370 | Msa1432500 | 0.818004 | 2.456999e-52 | -8.615850e-47 |
| Msa0583360 | Msa1432500 | -0.809540 | 1.799228e-50 | -8.615850e-47 |
| Msa0587620 | Msa1432500 | 0.813028 | 3.149191e-51 | -8.615850e-47 |
| Msa0597270 | Msa1432500 | 0.806044 | 9.959720e-50 | -8.615850e-47 |
| Msa0597790 | Msa1432500 | 0.807733 | 4.375503e-50 | -8.615850e-47 |
| Msa0600930 | Msa1432500 | 0.812353 | 4.424929e-51 | -8.615850e-47 |
| Msa0601950 | Msa1432500 | 0.801786 | 7.637999e-49 | -8.615850e-47 |
| Msa0845110 | Msa1432500 | 0.823265 | 1.519844e-53 | -8.615850e-47 |
| Msa0861510 | Msa1432500 | 0.824568 | 7.523573e-54 | -8.615850e-47 |
| Msa0861530 | Msa1432500 | 0.810443 | 1.149694e-50 | -8.615850e-47 |
| Msa0861600 | Msa1432500 | 0.824366 | 8.391554e-54 | -8.615850e-47 |
| Msa0863010 | Msa1432500 | 0.842794 | 2.080114e-58 | -8.615850e-47 |
| Msa0866290 | Msa1432500 | 0.815172 | 1.059114e-51 | -8.615850e-47 |
| Msa0870520 | Msa1432500 | 0.808349 | 3.235751e-50 | -8.615850e-47 |
| Msa0875290 | Msa1432500 | 0.813330 | 2.703865e-51 | -8.615850e-47 |
| Msa0876310 | Msa1432500 | 0.802029 | 6.808666e-49 | -8.615850e-47 |
| Msa0880270 | Msa1432500 | 0.832306 | 1.019295e-55 | -8.615850e-47 |
| Msa0894790 | Msa1432500 | 0.826505 | 2.615051e-54 | -8.615850e-47 |
| Msa0935820 | Msa1432500 | 0.802817 | 4.685536e-49 | -8.615850e-47 |
| Msa0936380 | Msa1432500 | 0.807962 | 3.911524e-50 | -8.615850e-47 |
| Msa0943440 | Msa1432500 | 0.805734 | 1.157243e-49 | -8.615850e-47 |
| Msa0945110 | Msa1432500 | 0.805256 | 1.457069e-49 | -8.615850e-47 |
| Msa0945190 | Msa1432500 | 0.835551 | 1.570738e-56 | -8.615850e-47 |
| Msa0967380 | Msa1432500 | 0.807432 | 5.068589e-50 | -8.615850e-47 |
| Msa0967870 | Msa1432500 | 0.855620 | 5.584957e-62 | -8.615850e-47 |
| Msa0973140 | Msa1432500 | 0.801556 | 8.514375e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432500 | MtrunA17_Chr1g0184231 | 94.144 | 666 | 39 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1306 |
| Msa1432500 | MtrunA17_Chr7g0261061 | 57.245 | 697 | 232 | 8 | 1 | 665 | 1 | 663 | 0.0 | 702 |
| Msa1432500 | MtrunA17_Chr7g0239641 | 28.511 | 712 | 398 | 26 | 2 | 650 | 3 | 666 | 1.25e-65 | 229 |
| Msa1432500 | MtrunA17_Chr4g0025571 | 54.124 | 194 | 83 | 3 | 466 | 659 | 707 | 894 | 2.16e-55 | 203 |
| Msa1432500 | MtrunA17_Chr4g0025571 | 30.986 | 213 | 116 | 7 | 1 | 186 | 1 | 209 | 3.81e-20 | 95.5 |
| Msa1432500 | MtrunA17_Chr2g0322001 | 52.062 | 194 | 87 | 3 | 466 | 659 | 668 | 855 | 7.46e-54 | 198 |
| Msa1432500 | MtrunA17_Chr2g0322001 | 30.047 | 213 | 113 | 7 | 1 | 184 | 1 | 206 | 4.10e-20 | 95.5 |
| Msa1432500 | MtrunA17_Chr1g0188861 | 44.086 | 186 | 97 | 3 | 482 | 664 | 573 | 754 | 2.25e-42 | 164 |
| Msa1432500 | MtrunA17_Chr1g0188861 | 32.515 | 163 | 75 | 4 | 1 | 155 | 5 | 140 | 7.11e-15 | 78.6 |
| Msa1432500 | MtrunA17_Chr2g0317011 | 27.419 | 186 | 84 | 7 | 5 | 155 | 20 | 189 | 3.78e-13 | 72.0 |
| Msa1432500 | MtrunA17_Chr5g0413871 | 30.049 | 203 | 84 | 8 | 5 | 155 | 14 | 210 | 6.76e-13 | 70.9 |
| Msa1432500 | MtrunA17_Chr1g0152981 | 28.426 | 197 | 78 | 9 | 5 | 152 | 12 | 194 | 5.85e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432500 | AT2G31280.1 | 40.479 | 751 | 323 | 21 | 1 | 662 | 1 | 716 | 2.40e-146 | 442 |
| Msa1432500 | AT2G31280.3 | 39.583 | 768 | 323 | 22 | 1 | 662 | 1 | 733 | 7.28e-142 | 431 |
| Msa1432500 | AT2G31280.2 | 38.646 | 709 | 305 | 20 | 7 | 638 | 33 | 688 | 2.23e-119 | 373 |
| Msa1432500 | AT1G06150.2 | 49.515 | 412 | 181 | 10 | 261 | 663 | 341 | 734 | 2.63e-101 | 326 |
| Msa1432500 | AT1G06150.2 | 49.412 | 170 | 64 | 3 | 1 | 157 | 1 | 161 | 5.54e-40 | 157 |
| Msa1432500 | AT1G06150.1 | 49.272 | 412 | 180 | 11 | 261 | 663 | 341 | 732 | 1.79e-99 | 321 |
| Msa1432500 | AT1G06150.1 | 49.412 | 170 | 64 | 3 | 1 | 157 | 1 | 161 | 6.06e-40 | 157 |
| Msa1432500 | AT2G27230.2 | 39.809 | 314 | 154 | 9 | 352 | 659 | 336 | 620 | 1.19e-50 | 187 |
| Msa1432500 | AT2G27230.2 | 32.065 | 184 | 98 | 5 | 1 | 169 | 1 | 172 | 3.24e-20 | 95.5 |
| Msa1432500 | AT2G27230.1 | 39.809 | 314 | 154 | 9 | 352 | 659 | 336 | 620 | 1.19e-50 | 187 |
| Msa1432500 | AT2G27230.1 | 32.065 | 184 | 98 | 5 | 1 | 169 | 1 | 172 | 3.24e-20 | 95.5 |
| Msa1432500 | AT1G64625.3 | 44.279 | 201 | 94 | 3 | 459 | 659 | 311 | 493 | 4.94e-46 | 171 |
| Msa1432500 | AT1G64625.3 | 33.571 | 140 | 59 | 3 | 1 | 140 | 1 | 106 | 1.99e-14 | 77.0 |
| Msa1432500 | AT1G64625.1 | 44.279 | 201 | 94 | 3 | 459 | 659 | 335 | 517 | 8.47e-46 | 171 |
| Msa1432500 | AT1G64625.1 | 32.484 | 157 | 62 | 5 | 1 | 140 | 1 | 130 | 8.67e-13 | 71.6 |
| Msa1432500 | AT1G64625.2 | 44.279 | 201 | 94 | 3 | 459 | 659 | 325 | 507 | 9.06e-46 | 171 |
| Msa1432500 | AT1G64625.2 | 33.333 | 150 | 60 | 4 | 1 | 140 | 1 | 120 | 6.53e-14 | 75.1 |
| Msa1432500 | AT1G64625.4 | 51.456 | 103 | 44 | 2 | 459 | 561 | 325 | 421 | 2.01e-24 | 107 |
| Msa1432500 | AT1G64625.4 | 33.333 | 150 | 60 | 4 | 1 | 140 | 1 | 120 | 2.45e-14 | 76.3 |
| Msa1432500 | AT3G15240.2 | 28.191 | 188 | 85 | 6 | 5 | 155 | 34 | 208 | 6.11e-14 | 74.3 |
| Msa1432500 | AT5G53900.2 | 27.094 | 203 | 103 | 7 | 5 | 172 | 21 | 213 | 2.61e-13 | 72.4 |
Find 195 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTCAGCATACTTTATTTA+AGG | 0.129093 | tig0027109:+26222 | None:intergenic |
| TGTATGAAATTGAGTGTTTA+AGG | 0.160000 | tig0027109:+28002 | None:intergenic |
| ATTTATAATAACCCTTTATT+TGG | 0.175519 | tig0027109:-27575 | Msa1432500:five_prime_UTR |
| GAAAGAAAGTGTAAAGTTTA+AGG | 0.181871 | tig0027109:+28068 | None:intergenic |
| AAAATTGTGAACTGAGTAAA+AGG | 0.202438 | tig0027109:+28040 | None:intergenic |
| TGGGAAGAATCACAATTATC+AGG | 0.237556 | tig0027109:+26725 | None:intergenic |
| CTCCCAAGACTTCTTTGCTT+GGG | 0.244686 | tig0027109:+22785 | None:intergenic |
| CTTTAACACCCTCCAAATAA+AGG | 0.255312 | tig0027109:+27563 | None:intergenic |
| TGATGGACTTGTTAAATCTT+TGG | 0.262539 | tig0027109:+25120 | None:intergenic |
| GAAAGAAAAGCTCACTGTTT+TGG | 0.264233 | tig0027109:+28163 | None:intergenic |
| ATCTCGTCCGGAACATCTTT+TGG | 0.269914 | tig0027109:-24873 | Msa1432500:CDS |
| TTTGGAGGGTGTTAAAGTTT+TGG | 0.281930 | tig0027109:-27557 | Msa1432500:five_prime_UTR |
| CTACAATATCATTATTACTA+TGG | 0.303371 | tig0027109:+24828 | None:intergenic |
| TATGTACATTTCTGTTGTTT+TGG | 0.304838 | tig0027109:+22971 | None:intergenic |
| TCTTAGTAGTTGATGCAAAT+TGG | 0.311091 | tig0027109:+27503 | None:intergenic |
| GGGTAGGGATAGGTTGTTAT+TGG | 0.323501 | tig0027109:-27773 | Msa1432500:five_prime_UTR |
| CATCATAGTTTGAGTTTGTC+AGG | 0.324738 | tig0027109:-24662 | Msa1432500:CDS |
| ATTGGAAGTATGCTATCTTT+TGG | 0.326772 | tig0027109:-27461 | Msa1432500:CDS |
| CTTCTGCTATCTCAAGAAAA+TGG | 0.337897 | tig0027109:+23275 | None:intergenic |
| AATTTCAAGCCCCTCGTGTT+TGG | 0.340965 | tig0027109:+25339 | None:intergenic |
| GTTGGACAGGTAGCTGTTAC+TGG | 0.341561 | tig0027109:-26490 | Msa1432500:CDS |
| CTCTGATTATCAACAACAAC+AGG | 0.341637 | tig0027109:-23513 | Msa1432500:CDS |
| AGCCTTCTGAATTAATATTT+CGG | 0.342951 | tig0027109:+24726 | None:intergenic |
| TCTATTCGTGATCACACATT+AGG | 0.346800 | tig0027109:-25508 | Msa1432500:CDS |
| CTTCTTTGCTTGGGGAAAGC+AGG | 0.352198 | tig0027109:+22794 | None:intergenic |
| TACATAGACTGGACATCTTA+TGG | 0.354256 | tig0027109:-22954 | Msa1432500:CDS |
| GAATTTGAGGTTCGAAGGTT+GGG | 0.363573 | tig0027109:-27819 | Msa1432500:five_prime_UTR |
| GTGTGTTACGTTTCACGCTT+TGG | 0.365954 | tig0027109:+25467 | None:intergenic |
| GACGGGTGAAACACTTGATA+TGG | 0.366173 | tig0027109:-25434 | Msa1432500:CDS |
| TCACACATCCTTTCATTTGA+AGG | 0.372706 | tig0027109:+25235 | None:intergenic |
| CAAGATACCTTTGCTCCGTT+TGG | 0.374894 | tig0027109:+24449 | None:intergenic |
| TTTCTGCTTTCTCTTGCTTT+CGG | 0.376048 | tig0027109:+28194 | None:intergenic |
| CCGTATCATGTATATTCGTT+AGG | 0.377911 | tig0027109:-26617 | Msa1432500:CDS |
| AGTTGTCTGTCCCTTGGTCT+AGG | 0.381960 | tig0027109:+24509 | None:intergenic |
| CAGCATGCTTAGTTACGCTT+TGG | 0.384514 | tig0027109:+24266 | None:intergenic |
| ACTTGGTAAACACAACAATA+TGG | 0.387082 | tig0027109:+22585 | None:intergenic |
| AGAAGAAAGAGAGTGTGTTT+TGG | 0.391723 | tig0027109:+28223 | None:intergenic |
| TCATGAATGTGTGGTGCTCT+TGG | 0.391843 | tig0027109:+22909 | None:intergenic |
| GCCTTTGTTTGGATACTGAT+TGG | 0.393403 | tig0027109:-27479 | Msa1432500:CDS |
| ACTGATCCAAGACCGTATTA+AGG | 0.395166 | tig0027109:-24489 | Msa1432500:CDS |
| TTTAACACCCTCCAAATAAA+GGG | 0.396110 | tig0027109:+27564 | None:intergenic |
| ACTACTAAGAAGCCTTTGTT+TGG | 0.398957 | tig0027109:-27490 | Msa1432500:CDS |
| GTAGAAAATCTTAGTAAGAA+TGG | 0.406604 | tig0027109:-23437 | Msa1432500:CDS |
| TCTCCCAAGACTTCTTTGCT+TGG | 0.415830 | tig0027109:+22784 | None:intergenic |
| TCATTATGAACAGAAACTTC+AGG | 0.416026 | tig0027109:+24749 | None:intergenic |
| CGTATCATGTATATTCGTTA+GGG | 0.420977 | tig0027109:-26616 | Msa1432500:CDS |
| TTAACTCCTTAATACGGTCT+TGG | 0.421661 | tig0027109:+24483 | None:intergenic |
| AGCAGAAGCCGTAAGAAGCT+TGG | 0.422035 | tig0027109:-23260 | Msa1432500:CDS |
| AACTGCGCAGTTGCATCATA+TGG | 0.422500 | tig0027109:-23555 | Msa1432500:intron |
| GTATGAAATTGAGTGTTTAA+GGG | 0.427711 | tig0027109:+28003 | None:intergenic |
| ATTATTACTATGGCAAACTT+TGG | 0.428962 | tig0027109:+24838 | None:intergenic |
| CGTCAGTCCCAAGCTTCTTA+CGG | 0.431906 | tig0027109:+23252 | None:intergenic |
| TGGATCAGTTGTCTGTCCCT+TGG | 0.434072 | tig0027109:+24503 | None:intergenic |
| TTCCCCAAGCAAAGAAGTCT+TGG | 0.434452 | tig0027109:-22788 | Msa1432500:three_prime_UTR |
| CTTGAAATTGACAGCGATCA+AGG | 0.439876 | tig0027109:-25325 | Msa1432500:CDS |
| TAGAAAATCTTAGTAAGAAT+GGG | 0.442335 | tig0027109:-23436 | Msa1432500:CDS |
| GTTCTGAGAGCACATACTTT+GGG | 0.443847 | tig0027109:+26706 | None:intergenic |
| AGAATTTGAGGTTCGAAGGT+TGG | 0.447143 | tig0027109:-27820 | Msa1432500:five_prime_UTR |
| GTGGAAGAAGGTGAAGAAGA+TGG | 0.448644 | tig0027109:-27529 | Msa1432500:exon |
| GACGAGATTCAAAAGTCAAT+TGG | 0.450977 | tig0027109:+24888 | None:intergenic |
| CTAGGCCAGGTGAAAGTTGT+AGG | 0.452487 | tig0027109:-24532 | Msa1432500:CDS |
| TATAATAACCCTTTATTTGG+AGG | 0.454693 | tig0027109:-27572 | Msa1432500:five_prime_UTR |
| TGTTCTGAGAGCACATACTT+TGG | 0.455292 | tig0027109:+26705 | None:intergenic |
| CCACTTGGAGTTGTTCAACT+TGG | 0.456296 | tig0027109:-26247 | Msa1432500:CDS |
| CGGTCGGACCGCCATTAAAA+CGG | 0.458939 | tig0027109:-27747 | Msa1432500:five_prime_UTR |
| TTGGGAGAAGGAAACTTGTT+GGG | 0.466698 | tig0027109:-22769 | Msa1432500:three_prime_UTR |
| CGCTTTGGATTTGACTAGGA+AGG | 0.470186 | tig0027109:+25482 | None:intergenic |
| CTTGGGAGAAGGAAACTTGT+TGG | 0.472420 | tig0027109:-22770 | Msa1432500:three_prime_UTR |
| TGACATTGATTGAAGCAAGA+TGG | 0.472773 | tig0027109:+25300 | None:intergenic |
| GTTCTCTTAACTCCTTAATA+CGG | 0.473917 | tig0027109:+24477 | None:intergenic |
| GTTCAGAAGACCTCTCAAAC+TGG | 0.474775 | tig0027109:+24579 | None:intergenic |
| TTCTTTGCTTGGGGAAAGCA+GGG | 0.475732 | tig0027109:+22795 | None:intergenic |
| CAACAGAAATGTACATAGAC+TGG | 0.476550 | tig0027109:-22965 | Msa1432500:CDS |
| GCAGAAGCCGTAAGAAGCTT+GGG | 0.478373 | tig0027109:-23259 | Msa1432500:CDS |
| AGGAAATTTCAATGTGTATG+AGG | 0.478639 | tig0027109:+25036 | None:intergenic |
| CCGCCATTAAAACGGCGAGC+AGG | 0.478662 | tig0027109:-27739 | Msa1432500:five_prime_UTR |
| CATATGGAAAATGACATTCA+TGG | 0.481714 | tig0027109:-23539 | Msa1432500:CDS |
| GTAACGCCCTTCCAATGTCC+TGG | 0.482137 | tig0027109:-25412 | Msa1432500:CDS |
| TCCTGTTTCTACAGTATGGT+TGG | 0.484140 | tig0027109:-26508 | Msa1432500:intron |
| TTTCTACAGTATGGTTGGAC+AGG | 0.486471 | tig0027109:-26503 | Msa1432500:intron |
| TCCCCAAGCAAAGAAGTCTT+GGG | 0.486968 | tig0027109:-22787 | Msa1432500:three_prime_UTR |
| ATTGAAATTGCAAGCTTCCA+TGG | 0.489226 | tig0027109:+27910 | None:intergenic |
| TATTAAGGAGTTAAGAGAAC+TGG | 0.491639 | tig0027109:-24474 | Msa1432500:CDS |
| AAGTGAGTGAGAGGTGTGAT+GGG | 0.491855 | tig0027109:-27793 | Msa1432500:five_prime_UTR |
| AGGATCCTCACCTTAAAAGA+TGG | 0.491951 | tig0027109:+26421 | None:intergenic |
| CGCCATTAAAACGGCGAGCA+GGG | 0.495030 | tig0027109:-27738 | Msa1432500:five_prime_UTR |
| ACAACAACAGGGTTCAAGTT+GGG | 0.495964 | tig0027109:-23501 | Msa1432500:CDS |
| ATGTGTGAAGGGAACAATAA+TGG | 0.497231 | tig0027109:-25220 | Msa1432500:CDS |
| ATAGAGGAAGCTAAAGCAAA+GGG | 0.498802 | tig0027109:-27684 | Msa1432500:five_prime_UTR |
| TAAAACGGCGAGCAGGGTTG+AGG | 0.498874 | tig0027109:-27732 | Msa1432500:five_prime_UTR |
| TCCCAAGACTTCTTTGCTTG+GGG | 0.500375 | tig0027109:+22786 | None:intergenic |
| GAGTGAGAGGTGTGATGGGT+AGG | 0.500760 | tig0027109:-27789 | Msa1432500:five_prime_UTR |
| GGTAAACACAACAATATGGT+TGG | 0.502494 | tig0027109:+22589 | None:intergenic |
| TGGAAGAAGGTGAAGAAGAT+GGG | 0.503602 | tig0027109:-27528 | Msa1432500:exon |
| TACACATTGAAATTTCCTGC+TGG | 0.505845 | tig0027109:-25031 | Msa1432500:CDS |
| GAGACTAGGGACTAGGGACT+AGG | 0.509632 | tig0027109:-27605 | Msa1432500:five_prime_UTR |
| CTTGGGGAAAGCAGGGAGGA+AGG | 0.511468 | tig0027109:+22802 | None:intergenic |
| AAATTGTGAACTGAGTAAAA+GGG | 0.516260 | tig0027109:+28041 | None:intergenic |
| GAAGTGAGTGAGAGGTGTGA+TGG | 0.517684 | tig0027109:-27794 | Msa1432500:five_prime_UTR |
| ATCAAGTGTTTCACCCGTCA+TGG | 0.518290 | tig0027109:+25438 | None:intergenic |
| ATAATAACCCTTTATTTGGA+GGG | 0.518524 | tig0027109:-27571 | Msa1432500:five_prime_UTR |
| TTACTCTCTTTGAGAAAACC+TGG | 0.521989 | tig0027109:+24983 | None:intergenic |
| TTGAAGAATTTGAGGTTCGA+AGG | 0.524148 | tig0027109:-27824 | Msa1432500:five_prime_UTR |
| GTTGGGAGGAAGTGAGTGAG+AGG | 0.526894 | tig0027109:-27802 | Msa1432500:five_prime_UTR |
| CTGACAAACTCAAACTATGA+TGG | 0.527690 | tig0027109:+24663 | None:intergenic |
| GTGGTGGTGGGAGAGAGACT+AGG | 0.528783 | tig0027109:-27619 | Msa1432500:five_prime_UTR |
| ATGTATATTCGTTAGGGGAA+GGG | 0.529135 | tig0027109:-26610 | Msa1432500:intron |
| CCTAACGAATATACATGATA+CGG | 0.532424 | tig0027109:+26617 | None:intergenic |
| TTTGATATCAATTTCATGGA+GGG | 0.535036 | tig0027109:-22719 | Msa1432500:three_prime_UTR |
| ATCATTTCCTACATCAGTGC+AGG | 0.536203 | tig0027109:-24795 | Msa1432500:CDS |
| GTGCAGTATTGATTCACTGT+TGG | 0.539514 | tig0027109:-24317 | Msa1432500:CDS |
| ACTGCTTCCAAAAGATGTTC+CGG | 0.539659 | tig0027109:+24866 | None:intergenic |
| GGGAAGAATCACAATTATCA+GGG | 0.539821 | tig0027109:+26726 | None:intergenic |
| AGGAGGAAACAAGCTGGAAG+AGG | 0.540000 | tig0027109:-27712 | Msa1432500:five_prime_UTR |
| TAATGATATTGTAGATAATG+AGG | 0.540266 | tig0027109:-24819 | Msa1432500:CDS |
| ACAGGGTTCAAGTTGGGCAA+TGG | 0.540297 | tig0027109:-23495 | Msa1432500:CDS |
| AGTGAGAGGTGTGATGGGTA+GGG | 0.540634 | tig0027109:-27788 | Msa1432500:five_prime_UTR |
| ACCTTGGAGCAGATCTATGT+TGG | 0.541880 | tig0027109:-26683 | Msa1432500:CDS |
| GCTGGAAGAGGGTCTTATAG+AGG | 0.541887 | tig0027109:-27700 | Msa1432500:five_prime_UTR |
| CATGTATATTCGTTAGGGGA+AGG | 0.541965 | tig0027109:-26611 | Msa1432500:CDS |
| GCAGAGAATACGAAACAAGT+AGG | 0.544022 | tig0027109:-25265 | Msa1432500:CDS |
| GGGAGAGAGACTAGGGACTA+GGG | 0.544380 | tig0027109:-27611 | Msa1432500:five_prime_UTR |
| TCAACCATCTCATATTAAAG+AGG | 0.552455 | tig0027109:-24693 | Msa1432500:CDS |
| AGACTAGGGACTAGGGACTA+GGG | 0.553599 | tig0027109:-27604 | Msa1432500:five_prime_UTR |
| AACAACAACAGGGTTCAAGT+TGG | 0.556005 | tig0027109:-23502 | Msa1432500:CDS |
| ATCATAGTTTGAGTTTGTCA+GGG | 0.556500 | tig0027109:-24661 | Msa1432500:CDS |
| ATATCCTCTTTAATATGAGA+TGG | 0.557881 | tig0027109:+24689 | None:intergenic |
| TTGGGGAAAGCAGGGAGGAA+GGG | 0.558206 | tig0027109:+22803 | None:intergenic |
| TTACATGAAGCACTTGGACC+AGG | 0.559643 | tig0027109:-25001 | Msa1432500:CDS |
| TTTGAGGTTCGAAGGTTGGG+AGG | 0.560314 | tig0027109:-27816 | Msa1432500:five_prime_UTR |
| TGGTGGTGGGAGAGAGACTA+GGG | 0.560673 | tig0027109:-27618 | Msa1432500:five_prime_UTR |
| GGATAGGTTGTTATTGGCAA+CGG | 0.562235 | tig0027109:-27767 | Msa1432500:five_prime_UTR |
| GACCGAAATATTAATTCAGA+AGG | 0.563885 | tig0027109:-24728 | Msa1432500:CDS |
| CAAATGAAAGGATGTGTGAA+GGG | 0.564926 | tig0027109:-25231 | Msa1432500:CDS |
| AATTGTGAACTGAGTAAAAG+GGG | 0.565128 | tig0027109:+28042 | None:intergenic |
| TCAAGTTGGGCAATGGAGGT+AGG | 0.566298 | tig0027109:-23488 | Msa1432500:CDS |
| AGCAAAGAAGTCTTGGGAGA+AGG | 0.568917 | tig0027109:-22781 | Msa1432500:three_prime_UTR |
| GGATGAAACCTTCAAATGAA+AGG | 0.568936 | tig0027109:-25243 | Msa1432500:CDS |
| TCAGAAAATGACTATTGATG+TGG | 0.577639 | tig0027109:-25362 | Msa1432500:CDS |
| TGGGAGAGAGACTAGGGACT+AGG | 0.579198 | tig0027109:-27612 | Msa1432500:five_prime_UTR |
| TTGCTTGCAGGATCTTGACA+TGG | 0.580291 | tig0027109:-26769 | Msa1432500:intron |
| TCATGTAACTCATAACCAGC+AGG | 0.580707 | tig0027109:+25016 | None:intergenic |
| AACGGCGAGCAGGGTTGAGG+AGG | 0.581208 | tig0027109:-27729 | Msa1432500:five_prime_UTR |
| CTAGGCCTACAACTTTCACC+TGG | 0.582898 | tig0027109:+24527 | None:intergenic |
| TTCACGCTTTGGATTTGACT+AGG | 0.583058 | tig0027109:+25478 | None:intergenic |
| AACACACAGAAAACCATGAC+GGG | 0.583428 | tig0027109:-25451 | Msa1432500:CDS |
| GACTGCAATAATTGAACAAG+CGG | 0.583493 | tig0027109:+22931 | None:intergenic |
| GGGTTCAAGTTGGGCAATGG+AGG | 0.584395 | tig0027109:-23492 | Msa1432500:CDS |
| GAGGTGTGATGGGTAGGGAT+AGG | 0.587096 | tig0027109:-27783 | Msa1432500:five_prime_UTR |
| GGGTTGAGGAGGAAACAAGC+TGG | 0.587284 | tig0027109:-27718 | Msa1432500:five_prime_UTR |
| TCAAATGAAAGGATGTGTGA+AGG | 0.588450 | tig0027109:-25232 | Msa1432500:CDS |
| TAACGCCCTTCCAATGTCCT+GGG | 0.589847 | tig0027109:-25411 | Msa1432500:CDS |
| TATAGAGGAAGCTAAAGCAA+AGG | 0.591156 | tig0027109:-27685 | Msa1432500:five_prime_UTR |
| CAGAGAATACGAAACAAGTA+GGG | 0.591572 | tig0027109:-25264 | Msa1432500:CDS |
| CTGTTGTTGTTGATAATCAG+AGG | 0.593214 | tig0027109:+23514 | None:intergenic |
| TTAAGAGAACTGGTGCCAAA+CGG | 0.593259 | tig0027109:-24464 | Msa1432500:CDS |
| ATTGTGTCCTGCACTGATGT+AGG | 0.598822 | tig0027109:+24788 | None:intergenic |
| TTAGCTTATATCTGAAGACA+TGG | 0.601138 | tig0027109:+27951 | None:intergenic |
| ACTGGTGCCAAACGGAGCAA+AGG | 0.604316 | tig0027109:-24456 | Msa1432500:intron |
| AACTGGTTACCACACGAGCT+AGG | 0.607120 | tig0027109:+24596 | None:intergenic |
| AAATTGATATCAAAATGCTA+AGG | 0.610506 | tig0027109:+22728 | None:intergenic |
| TATGAGTTACATGAAGCACT+TGG | 0.610930 | tig0027109:-25007 | Msa1432500:CDS |
| TATTGATGTGGCCAAACACG+AGG | 0.617153 | tig0027109:-25350 | Msa1432500:CDS |
| TGCTTGCAGGATCTTGACAT+GGG | 0.618674 | tig0027109:-26768 | Msa1432500:intron |
| AGGTTGTTATTGGCAACGGT+CGG | 0.619266 | tig0027109:-27763 | Msa1432500:five_prime_UTR |
| TCCAATCAGTATCCAAACAA+AGG | 0.620757 | tig0027109:+27478 | None:intergenic |
| TTGAGTTTGTCAGGGATCTG+CGG | 0.621537 | tig0027109:-24653 | Msa1432500:CDS |
| GGAGGAAACAAGCTGGAAGA+GGG | 0.623624 | tig0027109:-27711 | Msa1432500:five_prime_UTR |
| AAAGTTGTAGGCCTAGACCA+AGG | 0.627816 | tig0027109:-24520 | Msa1432500:CDS |
| TACATCAGTGCAGGACACAA+TGG | 0.629927 | tig0027109:-24786 | Msa1432500:CDS |
| AATGCAGGTTGGTGAAGACA+TGG | 0.636281 | tig0027109:-25563 | Msa1432500:intron |
| GAATGGGCAGATGCTTGTTG+AGG | 0.640182 | tig0027109:-23420 | Msa1432500:intron |
| GTCGTAGCAGTACTACCACT+TGG | 0.641686 | tig0027109:-26262 | Msa1432500:CDS |
| CTGTTACTGGAAAACATCAG+TGG | 0.641892 | tig0027109:-26477 | Msa1432500:CDS |
| TCCAACATAGATCTGCTCCA+AGG | 0.643426 | tig0027109:+26682 | None:intergenic |
| AGTTGGGCAATGGAGGTAGG+AGG | 0.643833 | tig0027109:-23485 | Msa1432500:CDS |
| AAGTTGTAGGCCTAGACCAA+GGG | 0.652681 | tig0027109:-24519 | Msa1432500:CDS |
| TCGCAACAGATAATCCTAGA+GGG | 0.655424 | tig0027109:+26645 | None:intergenic |
| CGTGTGGTAACCAGTTTGAG+AGG | 0.663920 | tig0027109:-24589 | Msa1432500:CDS |
| TTCGCAACAGATAATCCTAG+AGG | 0.664107 | tig0027109:+26644 | None:intergenic |
| TTGCAGGATCTTGACATGGG+AGG | 0.664946 | tig0027109:-26765 | Msa1432500:intron |
| TAACACACAGAAAACCATGA+CGG | 0.666602 | tig0027109:-25452 | Msa1432500:CDS |
| TGCAGGTTGGTGAAGACATG+GGG | 0.669819 | tig0027109:-25561 | Msa1432500:intron |
| TCTACATGTCCTAGCTCGTG+TGG | 0.671422 | tig0027109:-24605 | Msa1432500:CDS |
| ATGCAGGTTGGTGAAGACAT+GGG | 0.672643 | tig0027109:-25562 | Msa1432500:intron |
| ATTGATGTGGCCAAACACGA+GGG | 0.677054 | tig0027109:-25349 | Msa1432500:CDS |
| AAACATTTATCATGAATGTG+TGG | 0.685784 | tig0027109:+22900 | None:intergenic |
| CCAAGTTGAACAACTCCAAG+TGG | 0.686515 | tig0027109:+26247 | None:intergenic |
| TTTGCTTGGGGAAAGCAGGG+AGG | 0.694219 | tig0027109:+22798 | None:intergenic |
| TTGATGTGGCCAAACACGAG+GGG | 0.694860 | tig0027109:-25348 | Msa1432500:CDS |
| TATGTGCTCTCAGAACACCT+TGG | 0.696188 | tig0027109:-26699 | Msa1432500:CDS |
| CATGCTACAGATGCTCTGTG+AGG | 0.715737 | tig0027109:-23305 | Msa1432500:intron |
| GTATCATGTATATTCGTTAG+GGG | 0.726980 | tig0027109:-26615 | Msa1432500:CDS |
| TCTGATTATCAACAACAACA+GGG | 0.741738 | tig0027109:-23512 | Msa1432500:CDS |
| AACGGTGCAAGTGAAGCTCG+TGG | 0.750508 | tig0027109:-23223 | Msa1432500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTGACATAAAATATAA+AGG | - | tig0027109:24905-24924 | Msa1432500:CDS | 10.0% |
| !! | ATTGATGTTTATAAAATTAA+GGG | + | tig0027109:27010-27029 | None:intergenic | 10.0% |
| !! | TATTGATGTTTATAAAATTA+AGG | + | tig0027109:27011-27030 | None:intergenic | 10.0% |
| !!! | CAAAGATTATATAAATTTTC+TGG | - | tig0027109:22619-22638 | Msa1432500:three_prime_UTR | 15.0% |
| !!! | AAAATTGTATTTTTAATCCA+TGG | - | tig0027109:22810-22829 | Msa1432500:three_prime_UTR | 15.0% |
| !! | ATTTATAATAACCCTTTATT+TGG | - | tig0027109:23162-23181 | Msa1432500:intron | 15.0% |
| !! | TTCTTAATTCAATATCTAAA+AGG | + | tig0027109:23535-23554 | None:intergenic | 15.0% |
| !!! | TTTTAGATATTGAATTAAGA+AGG | - | tig0027109:23534-23553 | Msa1432500:CDS | 15.0% |
| !! | TTTAGATATTGAATTAAGAA+GGG | - | tig0027109:23535-23554 | Msa1432500:CDS | 15.0% |
| !! | AAGAAATTTAAGCATTAAAA+GGG | + | tig0027109:24556-24575 | None:intergenic | 15.0% |
| !! | AATTAGGAGATTATATAAAT+GGG | + | tig0027109:24712-24731 | None:intergenic | 15.0% |
| !! | AAATTAGGAGATTATATAAA+TGG | + | tig0027109:24713-24732 | None:intergenic | 15.0% |
| !! | TTTATATAATCTCCTAATTT+CGG | - | tig0027109:24713-24732 | Msa1432500:CDS | 15.0% |
| !! | TTTGCTTATTATGTATAATA+AGG | + | tig0027109:24789-24808 | None:intergenic | 15.0% |
| !!! | TATGTCAAATATATTAGTTT+TGG | + | tig0027109:24897-24916 | None:intergenic | 15.0% |
| !!! | AATGCCATTATTTTATTATT+GGG | + | tig0027109:26609-26628 | None:intergenic | 15.0% |
| !!! | AAATGCCATTATTTTATTAT+TGG | + | tig0027109:26610-26629 | None:intergenic | 15.0% |
| !!! | AATTTTCAAAACATTGTTTT+CGG | + | tig0027109:26899-26918 | None:intergenic | 15.0% |
| !!! | TATTTTTGAAAATTCTCATC+TGG | - | tig0027109:22758-22777 | Msa1432500:three_prime_UTR | 20.0% |
| !!! | ATTTTTGAAAATTCTCATCT+GGG | - | tig0027109:22759-22778 | Msa1432500:three_prime_UTR | 20.0% |
| !!! | AGAATTTTTTGAAGAATTTG+AGG | - | tig0027109:22905-22924 | Msa1432500:exon | 20.0% |
| !!! | TCAAGAATCAATTTTAGATT+TGG | - | tig0027109:23571-23590 | Msa1432500:intron | 20.0% |
| !!! | CAATTTTAGATTTGGTTTTA+AGG | - | tig0027109:23579-23598 | Msa1432500:intron | 20.0% |
| !! | CATATGAAATTTAACTCATT+GGG | + | tig0027109:23916-23935 | None:intergenic | 20.0% |
| !! | ACATATGAAATTTAACTCAT+TGG | + | tig0027109:23917-23936 | None:intergenic | 20.0% |
| !!! | CTTATCTTAACATGTTTTAT+TGG | - | tig0027109:23937-23956 | Msa1432500:intron | 20.0% |
| !! | CAAGAAATTTAAGCATTAAA+AGG | + | tig0027109:24557-24576 | None:intergenic | 20.0% |
| !!! | TAAAGGCATATAATTTTTAG+TGG | - | tig0027109:24922-24941 | Msa1432500:CDS | 20.0% |
| !! | ATGTAGTTGAATAAATTTGA+CGG | - | tig0027109:25057-25076 | Msa1432500:CDS | 20.0% |
| !!! | ATTAACATTTTGCTAACAAA+TGG | + | tig0027109:25128-25147 | None:intergenic | 20.0% |
| !!! | AAGAGAGTAAATATTTTGAT+TGG | - | tig0027109:25767-25786 | Msa1432500:intron | 20.0% |
| !! | CTACAATATCATTATTACTA+TGG | + | tig0027109:25912-25931 | None:intergenic | 20.0% |
| !! | TAATGATATTGTAGATAATG+AGG | - | tig0027109:25918-25937 | Msa1432500:intron | 20.0% |
| !!! | ATTTTCTAAAACAAAGACAA+AGG | - | tig0027109:26507-26526 | Msa1432500:intron | 20.0% |
| !! | TCTTCCCAATAATAAAATAA+TGG | - | tig0027109:26602-26621 | Msa1432500:intron | 20.0% |
| !! | AAACATCAATAAGTATGAAA+TGG | - | tig0027109:27020-27039 | Msa1432500:intron | 20.0% |
| !! | TAGAAAATCTTAGTAAGAAT+GGG | - | tig0027109:27301-27320 | Msa1432500:intron | 20.0% |
| !! | AAATTGATATCAAAATGCTA+AGG | + | tig0027109:28012-28031 | None:intergenic | 20.0% |
| !! | AACACAAAAAGACAAAATAA+TGG | + | tig0027109:28062-28081 | None:intergenic | 20.0% |
| !!! | TTGTCTTTTTGTGTTTATAT+TGG | - | tig0027109:28067-28086 | Msa1432500:five_prime_UTR | 20.0% |
| !! | GAAAGAAAGTGTAAAGTTTA+AGG | + | tig0027109:22672-22691 | None:intergenic | 25.0% |
| ! | AAATTGTGAACTGAGTAAAA+GGG | + | tig0027109:22699-22718 | None:intergenic | 25.0% |
| ! | AAAATTGTGAACTGAGTAAA+AGG | + | tig0027109:22700-22719 | None:intergenic | 25.0% |
| ! | GTATGAAATTGAGTGTTTAA+GGG | + | tig0027109:22737-22756 | None:intergenic | 25.0% |
| ! | TGTATGAAATTGAGTGTTTA+AGG | + | tig0027109:22738-22757 | None:intergenic | 25.0% |
| !!! | AATGCTTGTGATAGTTTTAT+TGG | - | tig0027109:22847-22866 | Msa1432500:three_prime_UTR | 25.0% |
| !!! | TTTGTTGCTTTTTTTGTTGT+TGG | - | tig0027109:23078-23097 | Msa1432500:intron | 25.0% |
| !!! | TTGTTGGTTTCTTTTTTTGA+GGG | - | tig0027109:23094-23113 | Msa1432500:intron | 25.0% |
| !! | TATAATAACCCTTTATTTGG+AGG | - | tig0027109:23165-23184 | Msa1432500:intron | 25.0% |
| !! | ATAATAACCCTTTATTTGGA+GGG | - | tig0027109:23166-23185 | Msa1432500:intron | 25.0% |
| !!! | TGTTAAAGTTTTGGTTTTTG+TGG | - | tig0027109:23189-23208 | Msa1432500:intron | 25.0% |
| ! | CTGATACCAACTAAAAATTT+GGG | + | tig0027109:23767-23786 | None:intergenic | 25.0% |
| ! | TCTGATACCAACTAAAAATT+TGG | + | tig0027109:23768-23787 | None:intergenic | 25.0% |
| ! | TTTAATCTTAAACTGCATCT+AGG | + | tig0027109:24179-24198 | None:intergenic | 25.0% |
| !!! | AATTTCTAGTCCATCTTTTA+AGG | - | tig0027109:24306-24325 | Msa1432500:CDS | 25.0% |
| !! | TAGTCAGCATACTTTATTTA+AGG | + | tig0027109:24518-24537 | None:intergenic | 25.0% |
| !! | GTTTTTACACAATTCAGTTA+TGG | - | tig0027109:25582-25601 | Msa1432500:intron | 25.0% |
| !!! | GAGTAAATATTTTGATTGGA+CGG | - | tig0027109:25771-25790 | Msa1432500:intron | 25.0% |
| ! | ATTATTACTATGGCAAACTT+TGG | + | tig0027109:25902-25921 | None:intergenic | 25.0% |
| ! | AGCCTTCTGAATTAATATTT+CGG | + | tig0027109:26014-26033 | None:intergenic | 25.0% |
| ! | ATATCCTCTTTAATATGAGA+TGG | + | tig0027109:26051-26070 | None:intergenic | 25.0% |
| !! | ATGTAGAAGAAAAACTTTTG+GGG | + | tig0027109:26119-26138 | None:intergenic | 25.0% |
| !! | CATGTAGAAGAAAAACTTTT+GGG | + | tig0027109:26120-26139 | None:intergenic | 25.0% |
| !! | ACATGTAGAAGAAAAACTTT+TGG | + | tig0027109:26121-26140 | None:intergenic | 25.0% |
| ! | ATCTAAAAACAGCAAAAAGA+GGG | - | tig0027109:26182-26201 | Msa1432500:intron | 25.0% |
| !!! | ATTACATACATTGATTTGAG+TGG | - | tig0027109:26659-26678 | Msa1432500:CDS | 25.0% |
| ! | TCAGTGAAAATAGAAACAAA+CGG | - | tig0027109:26983-27002 | Msa1432500:intron | 25.0% |
| ! | CTCATTGTAAAATTGTTGTA+GGG | + | tig0027109:27109-27128 | None:intergenic | 25.0% |
| !! | ATACTGAATGAATTTTCAGA+TGG | + | tig0027109:27278-27297 | None:intergenic | 25.0% |
| ! | GTAGAAAATCTTAGTAAGAA+TGG | - | tig0027109:27300-27319 | Msa1432500:intron | 25.0% |
| !! | TCTAGAAAGAGTATATGTAA+AGG | + | tig0027109:27366-27385 | None:intergenic | 25.0% |
| ! | CGTAAAACTATTATGCATTA+TGG | - | tig0027109:27690-27709 | Msa1432500:five_prime_UTR | 25.0% |
| !!! | TATGTACATTTCTGTTGTTT+TGG | + | tig0027109:27769-27788 | None:intergenic | 25.0% |
| ! | AAACATTTATCATGAATGTG+TGG | + | tig0027109:27840-27859 | None:intergenic | 25.0% |
| !!! | GCATTTTGATATCAATTTCA+TGG | - | tig0027109:28014-28033 | Msa1432500:five_prime_UTR | 25.0% |
| !! | TTTTGATATCAATTTCATGG+AGG | - | tig0027109:28017-28036 | Msa1432500:five_prime_UTR | 25.0% |
| ! | TTTGATATCAATTTCATGGA+GGG | - | tig0027109:28018-28037 | Msa1432500:five_prime_UTR | 25.0% |
| !! | TTTTAAACTCACTAAAGACT+TGG | + | tig0027109:28172-28191 | None:intergenic | 25.0% |
| AATTGTGAACTGAGTAAAAG+GGG | + | tig0027109:22698-22717 | None:intergenic | 30.0% | |
| TTAGCTTATATCTGAAGACA+TGG | + | tig0027109:22789-22808 | None:intergenic | 30.0% | |
| !!! | GTTGTTGGTTTCTTTTTTTG+AGG | - | tig0027109:23093-23112 | Msa1432500:intron | 30.0% |
| !!! | TGTTGGTTTCTTTTTTTGAG+GGG | - | tig0027109:23095-23114 | Msa1432500:intron | 30.0% |
| TTTAACACCCTCCAAATAAA+GGG | + | tig0027109:23176-23195 | None:intergenic | 30.0% | |
| ! | TCTTAGTAGTTGATGCAAAT+TGG | + | tig0027109:23237-23256 | None:intergenic | 30.0% |
| !! | ATTGGAAGTATGCTATCTTT+TGG | - | tig0027109:23276-23295 | Msa1432500:CDS | 30.0% |
| AGCAAACATGGAAATTAGAA+AGG | + | tig0027109:23443-23462 | None:intergenic | 30.0% | |
| AACATGAAAATCAGCAAACA+TGG | + | tig0027109:23455-23474 | None:intergenic | 30.0% | |
| !!! | TGCTGATTTTCATGTTATAG+AGG | - | tig0027109:23459-23478 | Msa1432500:CDS | 30.0% |
| TTCATGTTATAGAGGTTTCT+TGG | - | tig0027109:23467-23486 | Msa1432500:CDS | 30.0% | |
| ATATTGAATTAAGAAGGGCA+TGG | - | tig0027109:23540-23559 | Msa1432500:CDS | 30.0% | |
| ! | TGTTCTACAAGCATTTTGTT+TGG | - | tig0027109:23612-23631 | Msa1432500:intron | 30.0% |
| !! | ATTTTGACGTCATATCTGAT+TGG | + | tig0027109:23684-23703 | None:intergenic | 30.0% |
| CGTCAAAATGAGTTTAGAAA+CGG | - | tig0027109:23695-23714 | Msa1432500:intron | 30.0% | |
| GTCAAAATGAGTTTAGAAAC+GGG | - | tig0027109:23696-23715 | Msa1432500:intron | 30.0% | |
| TCAAAATGAGTTTAGAAACG+GGG | - | tig0027109:23697-23716 | Msa1432500:intron | 30.0% | |
| TACCAACTAAAAATTTGGGT+TGG | + | tig0027109:23763-23782 | None:intergenic | 30.0% | |
| !! | CTTGCATTTGTTATGTTGTT+AGG | - | tig0027109:23874-23893 | Msa1432500:intron | 30.0% |
| !! | CTTAACATGTTTTATTGGTG+TGG | - | tig0027109:23942-23961 | Msa1432500:intron | 30.0% |
| CCTAACGAATATACATGATA+CGG | + | tig0027109:24123-24142 | None:intergenic | 30.0% | |
| CGTATCATGTATATTCGTTA+GGG | - | tig0027109:24121-24140 | Msa1432500:intron | 30.0% | |
| GTATCATGTATATTCGTTAG+GGG | - | tig0027109:24122-24141 | Msa1432500:intron | 30.0% | |
| AGTTGCATCATTGAAGAATA+AGG | + | tig0027109:24339-24358 | None:intergenic | 30.0% | |
| TCCTGTATAGTAAGATTTGA+AGG | - | tig0027109:24368-24387 | Msa1432500:intron | 30.0% | |
| AACAATTGTCTGTAAATGCA+AGG | + | tig0027109:24455-24474 | None:intergenic | 30.0% | |
| TTTAAGCATTAAAAGGGACA+AGG | + | tig0027109:24550-24569 | None:intergenic | 30.0% | |
| ATGTATAATAAGGACTGACA+GGG | + | tig0027109:24779-24798 | None:intergenic | 30.0% | |
| TATGTATAATAAGGACTGAC+AGG | + | tig0027109:24780-24799 | None:intergenic | 30.0% | |
| TAGCATGTAATTATTGTGCT+CGG | - | tig0027109:25021-25040 | Msa1432500:CDS | 30.0% | |
| !! | TGACGGATTGTATAATAGTT+TGG | - | tig0027109:25074-25093 | Msa1432500:CDS | 30.0% |
| !! | GTCATTTTCTGATAAACAGT+AGG | + | tig0027109:25367-25386 | None:intergenic | 30.0% |
| TCAGAAAATGACTATTGATG+TGG | - | tig0027109:25375-25394 | Msa1432500:CDS | 30.0% | |
| !! | TGATGGACTTGTTAAATCTT+TGG | + | tig0027109:25620-25639 | None:intergenic | 30.0% |
| AGGAAATTTCAATGTGTATG+AGG | + | tig0027109:25704-25723 | None:intergenic | 30.0% | |
| TCATTATGAACAGAAACTTC+AGG | + | tig0027109:25991-26010 | None:intergenic | 30.0% | |
| GACCGAAATATTAATTCAGA+AGG | - | tig0027109:26009-26028 | Msa1432500:intron | 30.0% | |
| TCAACCATCTCATATTAAAG+AGG | - | tig0027109:26044-26063 | Msa1432500:intron | 30.0% | |
| ! | ATCATAGTTTGAGTTTGTCA+GGG | - | tig0027109:26076-26095 | Msa1432500:intron | 30.0% |
| ! | TGTAGAAGAAAAACTTTTGG+GGG | + | tig0027109:26118-26137 | None:intergenic | 30.0% |
| !!! | CTCTTTTTGCTGTTTTTAGA+TGG | + | tig0027109:26183-26202 | None:intergenic | 30.0% |
| CATCTAAAAACAGCAAAAAG+AGG | - | tig0027109:26181-26200 | Msa1432500:intron | 30.0% | |
| GTTCTCTTAACTCCTTAATA+CGG | + | tig0027109:26263-26282 | None:intergenic | 30.0% | |
| TATTAAGGAGTTAAGAGAAC+TGG | - | tig0027109:26263-26282 | Msa1432500:CDS | 30.0% | |
| !! | TGCTTGTTCAATTGCTATTT+AGG | - | tig0027109:26562-26581 | Msa1432500:intron | 30.0% |
| !! | ACATTGATTTGAGTGGAATT+AGG | - | tig0027109:26666-26685 | Msa1432500:CDS | 30.0% |
| GTGATAACTAATGTTCATCA+AGG | + | tig0027109:26745-26764 | None:intergenic | 30.0% | |
| CTTAACTGTGATAGAGAATA+TGG | - | tig0027109:26840-26859 | Msa1432500:intron | 30.0% | |
| ! | AGTTAGGGAAAATGCATTTT+TGG | - | tig0027109:26868-26887 | Msa1432500:intron | 30.0% |
| CCTCATTGTAAAATTGTTGT+AGG | + | tig0027109:27110-27129 | None:intergenic | 30.0% | |
| ! | CCTACAACAATTTTACAATG+AGG | - | tig0027109:27107-27126 | Msa1432500:intron | 30.0% |
| CATATGGAAAATGACATTCA+TGG | - | tig0027109:27198-27217 | Msa1432500:intron | 30.0% | |
| TCTGATTATCAACAACAACA+GGG | - | tig0027109:27225-27244 | Msa1432500:intron | 30.0% | |
| ! | ATTCATGATAATGAGCGTAA+GGG | + | tig0027109:27412-27431 | None:intergenic | 30.0% |
| ACTTGGTAAACACAACAATA+TGG | + | tig0027109:28155-28174 | None:intergenic | 30.0% | |
| !! | AGAAGAAAGAGAGTGTGTTT+TGG | + | tig0027109:22517-22536 | None:intergenic | 35.0% |
| TTTCTGCTTTCTCTTGCTTT+CGG | + | tig0027109:22546-22565 | None:intergenic | 35.0% | |
| ! | GAAAGAAAAGCTCACTGTTT+TGG | + | tig0027109:22577-22596 | None:intergenic | 35.0% |
| ATTGAAATTGCAAGCTTCCA+TGG | + | tig0027109:22830-22849 | None:intergenic | 35.0% | |
| ! | TTGAAGAATTTGAGGTTCGA+AGG | - | tig0027109:22913-22932 | Msa1432500:CDS | 35.0% |
| TATAGAGGAAGCTAAAGCAA+AGG | - | tig0027109:23052-23071 | Msa1432500:intron | 35.0% | |
| ATAGAGGAAGCTAAAGCAAA+GGG | - | tig0027109:23053-23072 | Msa1432500:intron | 35.0% | |
| !!! | GTTGGTTTCTTTTTTTGAGG+GGG | - | tig0027109:23096-23115 | Msa1432500:intron | 35.0% |
| CTTTAACACCCTCCAAATAA+AGG | + | tig0027109:23177-23196 | None:intergenic | 35.0% | |
| !!! | TTTGGAGGGTGTTAAAGTTT+TGG | - | tig0027109:23180-23199 | Msa1432500:intron | 35.0% |
| !!! | GTTTTGGTTTTTGTGGAAGA+AGG | - | tig0027109:23196-23215 | Msa1432500:CDS | 35.0% |
| ACTACTAAGAAGCCTTTGTT+TGG | - | tig0027109:23247-23266 | Msa1432500:CDS | 35.0% | |
| TCCAATCAGTATCCAAACAA+AGG | + | tig0027109:23262-23281 | None:intergenic | 35.0% | |
| ! | TATAGAGGTTTCTTGGTGAT+TGG | - | tig0027109:23474-23493 | Msa1432500:CDS | 35.0% |
| !!! | ACCTTACAAGTTGGTTTTGT+GGG | - | tig0027109:23726-23745 | Msa1432500:intron | 35.0% |
| AGAGCCTATTCAATATCTGT+TGG | - | tig0027109:23785-23804 | Msa1432500:intron | 35.0% | |
| GAGCCTATTCAATATCTGTT+GGG | - | tig0027109:23786-23805 | Msa1432500:intron | 35.0% | |
| TTATGTCAAGACTTGACATC+TGG | + | tig0027109:23843-23862 | None:intergenic | 35.0% | |
| GGGAAGAATCACAATTATCA+GGG | + | tig0027109:24014-24033 | None:intergenic | 35.0% | |
| TGGGAAGAATCACAATTATC+AGG | + | tig0027109:24015-24034 | None:intergenic | 35.0% | |
| CCGTATCATGTATATTCGTT+AGG | - | tig0027109:24120-24139 | Msa1432500:intron | 35.0% | |
| ATGTATATTCGTTAGGGGAA+GGG | - | tig0027109:24127-24146 | Msa1432500:intron | 35.0% | |
| TACTGTAGAAACAGGACATT+AGG | + | tig0027109:24225-24244 | None:intergenic | 35.0% | |
| !! | AATGTCCTGTTTCTACAGTA+TGG | - | tig0027109:24225-24244 | Msa1432500:intron | 35.0% |
| TCAATGATGCAACTTGCATT+TGG | - | tig0027109:24345-24364 | Msa1432500:intron | 35.0% | |
| GCCTTCAAATCTTACTATAC+AGG | + | tig0027109:24372-24391 | None:intergenic | 35.0% | |
| ! | AAGATTTGAAGGCGTGTAAT+TGG | - | tig0027109:24379-24398 | Msa1432500:intron | 35.0% |
| ! | AATTCTCTTTTGAACCGCAT+TGG | + | tig0027109:24599-24618 | None:intergenic | 35.0% |
| TCCTAATTTCGGTAATTGCT+TGG | - | tig0027109:24724-24743 | Msa1432500:CDS | 35.0% | |
| ACCAAGCAATTACCGAAATT+AGG | + | tig0027109:24728-24747 | None:intergenic | 35.0% | |
| TAATTTCGGTAATTGCTTGG+TGG | - | tig0027109:24727-24746 | Msa1432500:CDS | 35.0% | |
| TCTATTCGTGATCACACATT+AGG | - | tig0027109:25229-25248 | Msa1432500:CDS | 35.0% | |
| TAACACACAGAAAACCATGA+CGG | - | tig0027109:25285-25304 | Msa1432500:CDS | 35.0% | |
| ! | TGACATTGATTGAAGCAAGA+TGG | + | tig0027109:25440-25459 | None:intergenic | 35.0% |
| CAGAGAATACGAAACAAGTA+GGG | - | tig0027109:25473-25492 | Msa1432500:CDS | 35.0% | |
| GGATGAAACCTTCAAATGAA+AGG | - | tig0027109:25494-25513 | Msa1432500:CDS | 35.0% | |
| TCACACATCCTTTCATTTGA+AGG | + | tig0027109:25505-25524 | None:intergenic | 35.0% | |
| TCAAATGAAAGGATGTGTGA+AGG | - | tig0027109:25505-25524 | Msa1432500:CDS | 35.0% | |
| CAAATGAAAGGATGTGTGAA+GGG | - | tig0027109:25506-25525 | Msa1432500:CDS | 35.0% | |
| ATGTGTGAAGGGAACAATAA+TGG | - | tig0027109:25517-25536 | Msa1432500:CDS | 35.0% | |
| ! | AACGATGAGACATTTTTGTC+TGG | + | tig0027109:25565-25584 | None:intergenic | 35.0% |
| ! | TCAGCTTCTACATTTTCTGA+TGG | + | tig0027109:25637-25656 | None:intergenic | 35.0% |
| TACACATTGAAATTTCCTGC+TGG | - | tig0027109:25706-25725 | Msa1432500:intron | 35.0% | |
| ! | TATGAGTTACATGAAGCACT+TGG | - | tig0027109:25730-25749 | Msa1432500:intron | 35.0% |
| ! | TTACTCTCTTTGAGAAAACC+TGG | + | tig0027109:25757-25776 | None:intergenic | 35.0% |
| !!! | TATTTTGATTGGACGGTACA+AGG | - | tig0027109:25778-25797 | Msa1432500:intron | 35.0% |
| GACGAGATTCAAAAGTCAAT+TGG | + | tig0027109:25852-25871 | None:intergenic | 35.0% | |
| !! | ATTGACTTTTGAATCTCGTC+CGG | - | tig0027109:25852-25871 | Msa1432500:intron | 35.0% |
| CTGACAAACTCAAACTATGA+TGG | + | tig0027109:26077-26096 | None:intergenic | 35.0% | |
| ! | CATCATAGTTTGAGTTTGTC+AGG | - | tig0027109:26075-26094 | Msa1432500:intron | 35.0% |
| TTAACTCCTTAATACGGTCT+TGG | + | tig0027109:26257-26276 | None:intergenic | 35.0% | |
| ! | TTTTCTAATCCTGTCTCAGT+AGG | - | tig0027109:26324-26343 | Msa1432500:intron | 35.0% |
| !!! | AGGCTTTGGTTTTTTGATAG+CGG | - | tig0027109:26344-26363 | Msa1432500:intron | 35.0% |
| ACTTGTAGTTCCAATTCTTG+TGG | - | tig0027109:26370-26389 | Msa1432500:intron | 35.0% | |
| AGACAAAGGTAACGTCTTAT+TGG | - | tig0027109:26521-26540 | Msa1432500:intron | 35.0% | |
| ! | TTTAAGCTTTGTGAATAGCC+AGG | - | tig0027109:26717-26736 | Msa1432500:CDS | 35.0% |
| TTAGTTATCACTGAAGCCAA+TGG | - | tig0027109:26754-26773 | Msa1432500:CDS | 35.0% | |
| AGAGAATATGGAAGCTAGTT+AGG | - | tig0027109:26852-26871 | Msa1432500:intron | 35.0% | |
| GAGAATATGGAAGCTAGTTA+GGG | - | tig0027109:26853-26872 | Msa1432500:intron | 35.0% | |
| !! | CTGTTGTTGTTGATAATCAG+AGG | + | tig0027109:27226-27245 | None:intergenic | 35.0% |
| CTCTGATTATCAACAACAAC+AGG | - | tig0027109:27224-27243 | Msa1432500:intron | 35.0% | |
| ! | GATTCATGATAATGAGCGTA+AGG | + | tig0027109:27413-27432 | None:intergenic | 35.0% |
| CTTCTGCTATCTCAAGAAAA+TGG | + | tig0027109:27465-27484 | None:intergenic | 35.0% | |
| CAACAGAAATGTACATAGAC+TGG | - | tig0027109:27772-27791 | Msa1432500:five_prime_UTR | 35.0% | |
| TACATAGACTGGACATCTTA+TGG | - | tig0027109:27783-27802 | Msa1432500:five_prime_UTR | 35.0% | |
| GACTGCAATAATTGAACAAG+CGG | + | tig0027109:27809-27828 | None:intergenic | 35.0% | |
| GGTAAACACAACAATATGGT+TGG | + | tig0027109:28151-28170 | None:intergenic | 35.0% | |
| ! | AGAATTTGAGGTTCGAAGGT+TGG | - | tig0027109:22917-22936 | Msa1432500:CDS | 40.0% |
| ! | GAATTTGAGGTTCGAAGGTT+GGG | - | tig0027109:22918-22937 | Msa1432500:CDS | 40.0% |
| ! | GGATAGGTTGTTATTGGCAA+CGG | - | tig0027109:22970-22989 | Msa1432500:CDS | 40.0% |
| TGGAAGAAGGTGAAGAAGAT+GGG | - | tig0027109:23209-23228 | Msa1432500:CDS | 40.0% | |
| ! | GCCTTTGTTTGGATACTGAT+TGG | - | tig0027109:23258-23277 | Msa1432500:CDS | 40.0% |
| CAACGTTGTGCTAGAATGTA+TGG | - | tig0027109:23305-23324 | Msa1432500:intron | 40.0% | |
| !!! | CACCTTACAAGTTGGTTTTG+TGG | - | tig0027109:23725-23744 | Msa1432500:intron | 40.0% |
| !!! | CCTTACAAGTTGGTTTTGTG+GGG | - | tig0027109:23727-23746 | Msa1432500:intron | 40.0% |
| !!! | GGCCAACCCAAATTTTTAGT+TGG | - | tig0027109:23758-23777 | Msa1432500:intron | 40.0% |
| TGGCCCAACAGATATTGAAT+AGG | + | tig0027109:23792-23811 | None:intergenic | 40.0% | |
| !! | GTTCTGAGAGCACATACTTT+GGG | + | tig0027109:24034-24053 | None:intergenic | 40.0% |
| !! | TGTTCTGAGAGCACATACTT+TGG | + | tig0027109:24035-24054 | None:intergenic | 40.0% |
| ! | GATTTTTCACATGACCCTCT+AGG | - | tig0027109:24078-24097 | Msa1432500:intron | 40.0% |
| TCGCAACAGATAATCCTAGA+GGG | + | tig0027109:24095-24114 | None:intergenic | 40.0% | |
| TTCGCAACAGATAATCCTAG+AGG | + | tig0027109:24096-24115 | None:intergenic | 40.0% | |
| CATGTATATTCGTTAGGGGA+AGG | - | tig0027109:24126-24145 | Msa1432500:intron | 40.0% | |
| !! | TCCTGTTTCTACAGTATGGT+TGG | - | tig0027109:24229-24248 | Msa1432500:intron | 40.0% |
| TCCAACCATACTGTAGAAAC+AGG | + | tig0027109:24233-24252 | None:intergenic | 40.0% | |
| TTTCTACAGTATGGTTGGAC+AGG | - | tig0027109:24234-24253 | Msa1432500:CDS | 40.0% | |
| CTGTTACTGGAAAACATCAG+TGG | - | tig0027109:24260-24279 | Msa1432500:CDS | 40.0% | |
| !!! | CTAGTCCATCTTTTAAGGTG+AGG | - | tig0027109:24311-24330 | Msa1432500:CDS | 40.0% |
| AGGATCCTCACCTTAAAAGA+TGG | + | tig0027109:24319-24338 | None:intergenic | 40.0% | |
| TGTGAATGTTGTTGCCAATG+CGG | - | tig0027109:24582-24601 | Msa1432500:CDS | 40.0% | |
| ! | ATGTAAGGCTTGGTAAGTCA+GGG | + | tig0027109:24980-24999 | None:intergenic | 40.0% |
| CATTTGCCTGTCAACATGTA+AGG | + | tig0027109:24995-25014 | None:intergenic | 40.0% | |
| GCATTCACAGATGACAGAAA+AGG | + | tig0027109:25159-25178 | None:intergenic | 40.0% | |
| TTTCTGTCATCTGTGAATGC+AGG | - | tig0027109:25159-25178 | Msa1432500:CDS | 40.0% | |
| ! | TTCACGCTTTGGATTTGACT+AGG | + | tig0027109:25262-25281 | None:intergenic | 40.0% |
| AACACACAGAAAACCATGAC+GGG | - | tig0027109:25286-25305 | Msa1432500:CDS | 40.0% | |
| ! | AATAGCTTTTCCCAGGACAT+TGG | + | tig0027109:25339-25358 | None:intergenic | 40.0% |
| CTTGAAATTGACAGCGATCA+AGG | - | tig0027109:25412-25431 | Msa1432500:CDS | 40.0% | |
| GCAGAGAATACGAAACAAGT+AGG | - | tig0027109:25472-25491 | Msa1432500:CDS | 40.0% | |
| GGTATCCTCGTAAAAAGACT+CGG | + | tig0027109:25683-25702 | None:intergenic | 40.0% | |
| TCATGTAACTCATAACCAGC+AGG | + | tig0027109:25724-25743 | None:intergenic | 40.0% | |
| ACTGCTTCCAAAAGATGTTC+CGG | + | tig0027109:25874-25893 | None:intergenic | 40.0% | |
| ATCATTTCCTACATCAGTGC+AGG | - | tig0027109:25942-25961 | Msa1432500:intron | 40.0% | |
| AAAACAGCAAAAAGAGGGCT+AGG | - | tig0027109:26187-26206 | Msa1432500:intron | 40.0% | |
| ACTGATCCAAGACCGTATTA+AGG | - | tig0027109:26248-26267 | Msa1432500:CDS | 40.0% | |
| ! | TTAAGAGAACTGGTGCCAAA+CGG | - | tig0027109:26273-26292 | Msa1432500:CDS | 40.0% |
| AAACCTTCAGCCACAAGAAT+TGG | + | tig0027109:26383-26402 | None:intergenic | 40.0% | |
| !! | GTGCAGTATTGATTCACTGT+TGG | - | tig0027109:26420-26439 | Msa1432500:intron | 40.0% |
| !! | ACGTCTTATTGGCTTTGAGA+TGG | - | tig0027109:26532-26551 | Msa1432500:intron | 40.0% |
| ! | GAGTGGAATTAGGCTTTGAT+CGG | - | tig0027109:26676-26695 | Msa1432500:CDS | 40.0% |
| CTAATGTTCATCAAGGAACC+TGG | + | tig0027109:26738-26757 | None:intergenic | 40.0% | |
| AATGAAATTCCAGCTACCCT+GGG | + | tig0027109:26805-26824 | None:intergenic | 40.0% | |
| AAATGAAATTCCAGCTACCC+TGG | + | tig0027109:26806-26825 | None:intergenic | 40.0% | |
| AGGGTAGCTGGAATTTCATT+TGG | - | tig0027109:26805-26824 | Msa1432500:intron | 40.0% | |
| AACAACAACAGGGTTCAAGT+TGG | - | tig0027109:27235-27254 | Msa1432500:intron | 40.0% | |
| ! | ACAACAACAGGGTTCAAGTT+GGG | - | tig0027109:27236-27255 | Msa1432500:intron | 40.0% |
| ! | TTGGGACTGACGATTTTGAA+CGG | - | tig0027109:27496-27515 | Msa1432500:CDS | 40.0% |
| ! | GAAGACATGCATGTGTTTTG+TGG | - | tig0027109:27540-27559 | Msa1432500:five_prime_UTR | 40.0% |
| ! | ATGCATGTGTTTTGTGGTTG+AGG | - | tig0027109:27546-27565 | Msa1432500:five_prime_UTR | 40.0% |
| ! | ATGTGTTTTGTGGTTGAGGT+AGG | - | tig0027109:27550-27569 | Msa1432500:five_prime_UTR | 40.0% |
| ATCGATGAATTGTCTGTCAC+AGG | - | tig0027109:27742-27761 | Msa1432500:five_prime_UTR | 40.0% | |
| TCGATGAATTGTCTGTCACA+GGG | - | tig0027109:27743-27762 | Msa1432500:five_prime_UTR | 40.0% | |
| ! | TTGGGAGAAGGAAACTTGTT+GGG | - | tig0027109:27968-27987 | Msa1432500:five_prime_UTR | 40.0% |
| ! | AAGTGAGTGAGAGGTGTGAT+GGG | - | tig0027109:22944-22963 | Msa1432500:CDS | 45.0% |
| GGGTAGGGATAGGTTGTTAT+TGG | - | tig0027109:22964-22983 | Msa1432500:CDS | 45.0% | |
| ! | AGGTTGTTATTGGCAACGGT+CGG | - | tig0027109:22974-22993 | Msa1432500:CDS | 45.0% |
| !!! | GGTTTCTTTTTTTGAGGGGG+TGG | - | tig0027109:23099-23118 | Msa1432500:intron | 45.0% |
| !!! | TTCTTTTTTTGAGGGGGTGG+TGG | - | tig0027109:23102-23121 | Msa1432500:intron | 45.0% |
| GTGGAAGAAGGTGAAGAAGA+TGG | - | tig0027109:23208-23227 | Msa1432500:CDS | 45.0% | |
| CCCCACAAAACCAACTTGTA+AGG | + | tig0027109:23730-23749 | None:intergenic | 45.0% | |
| !!! | TGGTTTTGTGGGGTTGAGTT+AGG | - | tig0027109:23737-23756 | Msa1432500:intron | 45.0% |
| GTCAAGACTTGACATCTGGA+GGG | + | tig0027109:23839-23858 | None:intergenic | 45.0% | |
| TGTCAAGACTTGACATCTGG+AGG | + | tig0027109:23840-23859 | None:intergenic | 45.0% | |
| TTGCTTGCAGGATCTTGACA+TGG | - | tig0027109:23968-23987 | Msa1432500:intron | 45.0% | |
| TGCTTGCAGGATCTTGACAT+GGG | - | tig0027109:23969-23988 | Msa1432500:intron | 45.0% | |
| TATGTGCTCTCAGAACACCT+TGG | - | tig0027109:24038-24057 | Msa1432500:intron | 45.0% | |
| ACCTTGGAGCAGATCTATGT+TGG | - | tig0027109:24054-24073 | Msa1432500:intron | 45.0% | |
| TCCAACATAGATCTGCTCCA+AGG | + | tig0027109:24058-24077 | None:intergenic | 45.0% | |
| ! | CCAAGTTGAACAACTCCAAG+TGG | + | tig0027109:24493-24512 | None:intergenic | 45.0% |
| CCACTTGGAGTTGTTCAACT+TGG | - | tig0027109:24490-24509 | Msa1432500:CDS | 45.0% | |
| !! | CTTGGTGGTGATTGAAGCAT+TGG | - | tig0027109:24742-24761 | Msa1432500:CDS | 45.0% |
| ! | CATGTAAGGCTTGGTAAGTC+AGG | + | tig0027109:24981-25000 | None:intergenic | 45.0% |
| ACCAAGCCTTACATGTTGAC+AGG | - | tig0027109:24986-25005 | Msa1432500:CDS | 45.0% | |
| TGTCATCTGTGAATGCAGGT+TGG | - | tig0027109:25163-25182 | Msa1432500:CDS | 45.0% | |
| !! | AATGCAGGTTGGTGAAGACA+TGG | - | tig0027109:25174-25193 | Msa1432500:CDS | 45.0% |
| !! | ATGCAGGTTGGTGAAGACAT+GGG | - | tig0027109:25175-25194 | Msa1432500:CDS | 45.0% |
| ! | CGCTTTGGATTTGACTAGGA+AGG | + | tig0027109:25258-25277 | None:intergenic | 45.0% |
| GTGTGTTACGTTTCACGCTT+TGG | + | tig0027109:25273-25292 | None:intergenic | 45.0% | |
| ATCAAGTGTTTCACCCGTCA+TGG | + | tig0027109:25302-25321 | None:intergenic | 45.0% | |
| GACGGGTGAAACACTTGATA+TGG | - | tig0027109:25303-25322 | Msa1432500:CDS | 45.0% | |
| ! | CTTTTCCCAGGACATTGGAA+GGG | + | tig0027109:25334-25353 | None:intergenic | 45.0% |
| ! | GGAGATGAATAGCTTTTCCC+AGG | + | tig0027109:25346-25365 | None:intergenic | 45.0% |
| TATTGATGTGGCCAAACACG+AGG | - | tig0027109:25387-25406 | Msa1432500:CDS | 45.0% | |
| ATTGATGTGGCCAAACACGA+GGG | - | tig0027109:25388-25407 | Msa1432500:CDS | 45.0% | |
| AATTTCAAGCCCCTCGTGTT+TGG | + | tig0027109:25401-25420 | None:intergenic | 45.0% | |
| ! | TCAGACCGAGTCTTTTTACG+AGG | - | tig0027109:25675-25694 | Msa1432500:intron | 45.0% |
| ! | TTACATGAAGCACTTGGACC+AGG | - | tig0027109:25736-25755 | Msa1432500:intron | 45.0% |
| ! | ATCTCGTCCGGAACATCTTT+TGG | - | tig0027109:25864-25883 | Msa1432500:intron | 45.0% |
| !! | GGAACATCTTTTGGAAGCAG+TGG | - | tig0027109:25873-25892 | Msa1432500:intron | 45.0% |
| ! | ATTGTGTCCTGCACTGATGT+AGG | + | tig0027109:25952-25971 | None:intergenic | 45.0% |
| TACATCAGTGCAGGACACAA+TGG | - | tig0027109:25951-25970 | Msa1432500:intron | 45.0% | |
| TTGAGTTTGTCAGGGATCTG+CGG | - | tig0027109:26084-26103 | Msa1432500:intron | 45.0% | |
| GTTCAGAAGACCTCTCAAAC+TGG | + | tig0027109:26161-26180 | None:intergenic | 45.0% | |
| AAAGTTGTAGGCCTAGACCA+AGG | - | tig0027109:26217-26236 | Msa1432500:intron | 45.0% | |
| AAGTTGTAGGCCTAGACCAA+GGG | - | tig0027109:26218-26237 | Msa1432500:intron | 45.0% | |
| CAAGATACCTTTGCTCCGTT+TGG | + | tig0027109:26291-26310 | None:intergenic | 45.0% | |
| AATCCTGTCTCAGTAGGCTT+TGG | - | tig0027109:26330-26349 | Msa1432500:intron | 45.0% | |
| AAACCAAAGCCTACTGAGAC+AGG | + | tig0027109:26336-26355 | None:intergenic | 45.0% | |
| GTTCCAATTCTTGTGGCTGA+AGG | - | tig0027109:26377-26396 | Msa1432500:intron | 45.0% | |
| CAGCATGCTTAGTTACGCTT+TGG | + | tig0027109:26474-26493 | None:intergenic | 45.0% | |
| ! | CATAGGTGTGAGGTATCCAT+TGG | + | tig0027109:26773-26792 | None:intergenic | 45.0% |
| GTTACAATGGCATAGGTGTG+AGG | + | tig0027109:26783-26802 | None:intergenic | 45.0% | |
| ACCTATGCCATTGTAACCCA+GGG | - | tig0027109:26786-26805 | Msa1432500:intron | 45.0% | |
| AACTGCGCAGTTGCATCATA+TGG | - | tig0027109:27182-27201 | Msa1432500:intron | 45.0% | |
| TCATGAATGTGTGGTGCTCT+TGG | + | tig0027109:27831-27850 | None:intergenic | 45.0% | |
| TTCTTTGCTTGGGGAAAGCA+GGG | + | tig0027109:27945-27964 | None:intergenic | 45.0% | |
| TTCCCCAAGCAAAGAAGTCT+TGG | - | tig0027109:27949-27968 | Msa1432500:five_prime_UTR | 45.0% | |
| TCCCCAAGCAAAGAAGTCTT+GGG | - | tig0027109:27950-27969 | Msa1432500:five_prime_UTR | 45.0% | |
| TCCCAAGACTTCTTTGCTTG+GGG | + | tig0027109:27954-27973 | None:intergenic | 45.0% | |
| CTCCCAAGACTTCTTTGCTT+GGG | + | tig0027109:27955-27974 | None:intergenic | 45.0% | |
| TCTCCCAAGACTTCTTTGCT+TGG | + | tig0027109:27956-27975 | None:intergenic | 45.0% | |
| AGCAAAGAAGTCTTGGGAGA+AGG | - | tig0027109:27956-27975 | Msa1432500:five_prime_UTR | 45.0% | |
| CTTGGGAGAAGGAAACTTGT+TGG | - | tig0027109:27967-27986 | Msa1432500:five_prime_UTR | 45.0% | |
| ! | TTTGAGGTTCGAAGGTTGGG+AGG | - | tig0027109:22921-22940 | Msa1432500:CDS | 50.0% |
| ! | GAAGTGAGTGAGAGGTGTGA+TGG | - | tig0027109:22943-22962 | Msa1432500:CDS | 50.0% |
| !! | AGTGAGAGGTGTGATGGGTA+GGG | - | tig0027109:22949-22968 | Msa1432500:CDS | 50.0% |
| !! | AACCCTGCTCGCCGTTTTAA+TGG | + | tig0027109:23004-23023 | None:intergenic | 50.0% |
| AGGAGGAAACAAGCTGGAAG+AGG | - | tig0027109:23025-23044 | Msa1432500:intron | 50.0% | |
| GGAGGAAACAAGCTGGAAGA+GGG | - | tig0027109:23026-23045 | Msa1432500:intron | 50.0% | |
| ! | GCTGGAAGAGGGTCTTATAG+AGG | - | tig0027109:23037-23056 | Msa1432500:intron | 50.0% |
| !!! | TTTTTTTGAGGGGGTGGTGG+TGG | - | tig0027109:23105-23124 | Msa1432500:intron | 50.0% |
| !!! | TTTTTTGAGGGGGTGGTGGT+GGG | - | tig0027109:23106-23125 | Msa1432500:intron | 50.0% |
| AGACTAGGGACTAGGGACTA+GGG | - | tig0027109:23133-23152 | Msa1432500:intron | 50.0% | |
| GGGTGTCTCACCTTACAAGT+TGG | - | tig0027109:23717-23736 | Msa1432500:intron | 50.0% | |
| CACCTGCTATCAGATCACCT+GGG | - | tig0027109:23810-23829 | Msa1432500:intron | 50.0% | |
| TTGGTGTGGCAATTGCTTGC+AGG | - | tig0027109:23956-23975 | Msa1432500:intron | 50.0% | |
| TTGCAGGATCTTGACATGGG+AGG | - | tig0027109:23972-23991 | Msa1432500:intron | 50.0% | |
| GTTGGACAGGTAGCTGTTAC+TGG | - | tig0027109:24247-24266 | Msa1432500:CDS | 50.0% | |
| GTCGTAGCAGTACTACCACT+TGG | - | tig0027109:24475-24494 | Msa1432500:CDS | 50.0% | |
| GCCTGTCAACATGTAAGGCT+TGG | + | tig0027109:24990-25009 | None:intergenic | 50.0% | |
| !! | TGCAGGTTGGTGAAGACATG+GGG | - | tig0027109:25176-25195 | Msa1432500:CDS | 50.0% |
| TAACGCCCTTCCAATGTCCT+GGG | - | tig0027109:25326-25345 | Msa1432500:CDS | 50.0% | |
| ! | GCTTTTCCCAGGACATTGGA+AGG | + | tig0027109:25335-25354 | None:intergenic | 50.0% |
| TTGATGTGGCCAAACACGAG+GGG | - | tig0027109:25389-25408 | Msa1432500:CDS | 50.0% | |
| TCTACATGTCCTAGCTCGTG+TGG | - | tig0027109:26132-26151 | Msa1432500:intron | 50.0% | |
| AACTGGTTACCACACGAGCT+AGG | + | tig0027109:26144-26163 | None:intergenic | 50.0% | |
| CGTGTGGTAACCAGTTTGAG+AGG | - | tig0027109:26148-26167 | Msa1432500:intron | 50.0% | |
| CTAGGCCAGGTGAAAGTTGT+AGG | - | tig0027109:26205-26224 | Msa1432500:intron | 50.0% | |
| CTAGGCCTACAACTTTCACC+TGG | + | tig0027109:26213-26232 | None:intergenic | 50.0% | |
| AGTTGTCTGTCCCTTGGTCT+AGG | + | tig0027109:26231-26250 | None:intergenic | 50.0% | |
| TGGATCAGTTGTCTGTCCCT+TGG | + | tig0027109:26237-26256 | None:intergenic | 50.0% | |
| CACCTATGCCATTGTAACCC+AGG | - | tig0027109:26785-26804 | Msa1432500:intron | 50.0% | |
| ACCCTGGGTTACAATGGCAT+AGG | + | tig0027109:26790-26809 | None:intergenic | 50.0% | |
| TGATGCAACTGCGCAGTTGT+AGG | + | tig0027109:27180-27199 | None:intergenic | 50.0% | |
| !! | ACAGGGTTCAAGTTGGGCAA+TGG | - | tig0027109:27242-27261 | Msa1432500:intron | 50.0% |
| !! | TCAAGTTGGGCAATGGAGGT+AGG | - | tig0027109:27249-27268 | Msa1432500:intron | 50.0% |
| ! | GAATGGGCAGATGCTTGTTG+AGG | - | tig0027109:27317-27336 | Msa1432500:intron | 50.0% |
| CATGCTACAGATGCTCTGTG+AGG | - | tig0027109:27432-27451 | Msa1432500:intron | 50.0% | |
| CTTCTTTGCTTGGGGAAAGC+AGG | + | tig0027109:27946-27965 | None:intergenic | 50.0% | |
| GTTGGGAGGAAGTGAGTGAG+AGG | - | tig0027109:22935-22954 | Msa1432500:CDS | 55.0% | |
| !! | GAGTGAGAGGTGTGATGGGT+AGG | - | tig0027109:22948-22967 | Msa1432500:CDS | 55.0% |
| !! | GAGGTGTGATGGGTAGGGAT+AGG | - | tig0027109:22954-22973 | Msa1432500:CDS | 55.0% |
| CGGTCGGACCGCCATTAAAA+CGG | - | tig0027109:22990-23009 | Msa1432500:intron | 55.0% | |
| !! | CCTGCTCGCCGTTTTAATGG+CGG | + | tig0027109:23001-23020 | None:intergenic | 55.0% |
| CGCCATTAAAACGGCGAGCA+GGG | - | tig0027109:22999-23018 | Msa1432500:intron | 55.0% | |
| TAAAACGGCGAGCAGGGTTG+AGG | - | tig0027109:23005-23024 | Msa1432500:intron | 55.0% | |
| GGGTTGAGGAGGAAACAAGC+TGG | - | tig0027109:23019-23038 | Msa1432500:intron | 55.0% | |
| !! | TGGTGGTGGGAGAGAGACTA+GGG | - | tig0027109:23119-23138 | Msa1432500:intron | 55.0% |
| TGGGAGAGAGACTAGGGACT+AGG | - | tig0027109:23125-23144 | Msa1432500:intron | 55.0% | |
| GGGAGAGAGACTAGGGACTA+GGG | - | tig0027109:23126-23145 | Msa1432500:intron | 55.0% | |
| GAGACTAGGGACTAGGGACT+AGG | - | tig0027109:23132-23151 | Msa1432500:intron | 55.0% | |
| CCAGGTGATCTGATAGCAGG+TGG | + | tig0027109:23812-23831 | None:intergenic | 55.0% | |
| CCACCTGCTATCAGATCACC+TGG | - | tig0027109:23809-23828 | Msa1432500:intron | 55.0% | |
| GACCCAGGTGATCTGATAGC+AGG | + | tig0027109:23815-23834 | None:intergenic | 55.0% | |
| GTAACGCCCTTCCAATGTCC+TGG | - | tig0027109:25325-25344 | Msa1432500:CDS | 55.0% | |
| AGCAAAAAGAGGGCTAGGCC+AGG | - | tig0027109:26192-26211 | Msa1432500:intron | 55.0% | |
| ! | ACTGGTGCCAAACGGAGCAA+AGG | - | tig0027109:26281-26300 | Msa1432500:intron | 55.0% |
| CCAGCTACCCTGGGTTACAA+TGG | + | tig0027109:26796-26815 | None:intergenic | 55.0% | |
| CCATTGTAACCCAGGGTAGC+TGG | - | tig0027109:26793-26812 | Msa1432500:intron | 55.0% | |
| !! | GGGTTCAAGTTGGGCAATGG+AGG | - | tig0027109:27245-27264 | Msa1432500:intron | 55.0% |
| AGTTGGGCAATGGAGGTAGG+AGG | - | tig0027109:27252-27271 | Msa1432500:intron | 55.0% | |
| AACGGTGCAAGTGAAGCTCG+TGG | - | tig0027109:27514-27533 | Msa1432500:exon | 55.0% | |
| TTGGGGAAAGCAGGGAGGAA+GGG | + | tig0027109:27937-27956 | None:intergenic | 55.0% | |
| TTTGCTTGGGGAAAGCAGGG+AGG | + | tig0027109:27942-27961 | None:intergenic | 55.0% | |
| CCGCCATTAAAACGGCGAGC+AGG | - | tig0027109:22998-23017 | Msa1432500:intron | 60.0% | |
| !! | GTGGTGGTGGGAGAGAGACT+AGG | - | tig0027109:23118-23137 | Msa1432500:intron | 60.0% |
| TGACATCTGGAGGGTGACCC+AGG | + | tig0027109:23830-23849 | None:intergenic | 60.0% | |
| CTTGGGGAAAGCAGGGAGGA+AGG | + | tig0027109:27938-27957 | None:intergenic | 60.0% | |
| AACGGCGAGCAGGGTTGAGG+AGG | - | tig0027109:23008-23027 | Msa1432500:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027109 | gene | 22496 | 28263 | 22496 | ID=Msa1432500;Name=Msa1432500 |
| tig0027109 | mRNA | 22496 | 28263 | 22496 | ID=Msa1432500-mRNA-1;Parent=Msa1432500;Name=Msa1432500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=731|1|1|1|0.87|1|9|413|666 |
| tig0027109 | exon | 22496 | 22995 | 22496 | ID=Msa1432500-mRNA-1:exon:8159;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 23192 | 23317 | 23192 | ID=Msa1432500-mRNA-1:exon:8158;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 23421 | 23567 | 23421 | ID=Msa1432500-mRNA-1:exon:8157;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 24231 | 24338 | 24231 | ID=Msa1432500-mRNA-1:exon:8156;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 24457 | 25578 | 24457 | ID=Msa1432500-mRNA-1:exon:8155;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 26234 | 26293 | 26234 | ID=Msa1432500-mRNA-1:exon:8154;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 26432 | 26516 | 26432 | ID=Msa1432500-mRNA-1:exon:8153;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 26611 | 26781 | 26611 | ID=Msa1432500-mRNA-1:exon:8152;Parent=Msa1432500-mRNA-1 |
| tig0027109 | exon | 27438 | 28263 | 27438 | ID=Msa1432500-mRNA-1:exon:8151;Parent=Msa1432500-mRNA-1 |
| tig0027109 | five_prime_UTR | 27533 | 28263 | 27533 | ID=Msa1432500-mRNA-1:five_prime_utr;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 27438 | 27532 | 27438 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 26611 | 26781 | 26611 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 26432 | 26516 | 26432 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 26234 | 26293 | 26234 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 24457 | 25578 | 24457 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 24231 | 24338 | 24231 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 23421 | 23567 | 23421 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 23192 | 23317 | 23192 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | CDS | 22909 | 22995 | 22909 | ID=Msa1432500-mRNA-1:cds;Parent=Msa1432500-mRNA-1 |
| tig0027109 | three_prime_UTR | 22496 | 22908 | 22496 | ID=Msa1432500-mRNA-1:three_prime_utr;Parent=Msa1432500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
