Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715060 | PNY13088.1 | 94.737 | 171 | 5 | 2 | 1 | 171 | 1 | 167 | 3.01e-114 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715060 | sp|Q9S7X6|ACL5_ARATH | 61.047 | 172 | 65 | 2 | 1 | 171 | 1 | 171 | 3.41e-71 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715060 | A0A2K3PCR2 | 94.737 | 171 | 5 | 2 | 1 | 171 | 1 | 167 | 1.44e-114 | 337 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0715060 | 0.821450 | 4.012859e-53 | -8.615850e-47 |
| Msa0005890 | Msa0715060 | 0.812660 | 3.790780e-51 | -8.615850e-47 |
| Msa0007970 | Msa0715060 | 0.803340 | 3.653134e-49 | -8.615850e-47 |
| Msa0024000 | Msa0715060 | 0.807102 | 5.954917e-50 | -8.615850e-47 |
| Msa0027820 | Msa0715060 | 0.818500 | 1.897815e-52 | -8.615850e-47 |
| Msa0035120 | Msa0715060 | 0.816848 | 4.476282e-52 | -8.615850e-47 |
| Msa0077340 | Msa0715060 | 0.805410 | 1.352960e-49 | -8.615850e-47 |
| Msa0081520 | Msa0715060 | 0.838221 | 3.271555e-57 | -8.615850e-47 |
| Msa0089980 | Msa0715060 | 0.805767 | 1.138689e-49 | -8.615850e-47 |
| Msa0090010 | Msa0715060 | 0.802717 | 4.914787e-49 | -8.615850e-47 |
| Msa0093850 | Msa0715060 | 0.848086 | 7.669024e-60 | -8.615850e-47 |
| Msa0094780 | Msa0715060 | 0.835311 | 1.806483e-56 | -8.615850e-47 |
| Msa0116680 | Msa0715060 | 0.804647 | 1.954338e-49 | -8.615850e-47 |
| Msa0611210 | Msa0715060 | 0.825783 | 3.882703e-54 | -8.615850e-47 |
| Msa0614000 | Msa0715060 | 0.820379 | 7.076913e-53 | -8.615850e-47 |
| Msa0626270 | Msa0715060 | 0.806512 | 7.934174e-50 | -8.615850e-47 |
| Msa0626450 | Msa0715060 | 0.836068 | 1.162112e-56 | -8.615850e-47 |
| Msa0626460 | Msa0715060 | 0.810837 | 9.452749e-51 | -8.615850e-47 |
| Msa0626490 | Msa0715060 | 0.834081 | 3.682357e-56 | -8.615850e-47 |
| Msa0638480 | Msa0715060 | 0.843193 | 1.628730e-58 | -8.615850e-47 |
| Msa0651550 | Msa0715060 | 0.839148 | 1.884355e-57 | -8.615850e-47 |
| Msa0652000 | Msa0715060 | 0.806724 | 7.156714e-50 | -8.615850e-47 |
| Msa0652770 | Msa0715060 | 0.847269 | 1.286820e-59 | -8.615850e-47 |
| Msa0658640 | Msa0715060 | 0.814062 | 1.865601e-51 | -8.615850e-47 |
| Msa0664090 | Msa0715060 | 0.806684 | 7.299456e-50 | -8.615850e-47 |
| Msa0664540 | Msa0715060 | 0.806817 | 6.841630e-50 | -8.615850e-47 |
| Msa0664600 | Msa0715060 | 0.840474 | 8.507692e-58 | -8.615850e-47 |
| Msa0693330 | Msa0715060 | 0.845418 | 4.112597e-59 | -8.615850e-47 |
| Msa0695270 | Msa0715060 | 0.834013 | 3.829937e-56 | -8.615850e-47 |
| Msa0701360 | Msa0715060 | 0.819998 | 8.652113e-53 | -8.615850e-47 |
| Msa0702720 | Msa0715060 | 0.801580 | 8.420378e-49 | -8.615850e-47 |
| Msa0706760 | Msa0715060 | 0.852849 | 3.523861e-61 | -8.615850e-47 |
| Msa0713680 | Msa0715060 | 0.821170 | 4.654486e-53 | -8.615850e-47 |
| Msa0713970 | Msa0715060 | 0.814028 | 1.897377e-51 | -8.615850e-47 |
| Msa0715060 | Msa0721080 | 0.801701 | 7.953286e-49 | -8.615850e-47 |
| Msa0715060 | Msa0725770 | 0.811891 | 5.578699e-51 | -8.615850e-47 |
| Msa0715060 | Msa0727640 | 0.801835 | 7.462850e-49 | -8.615850e-47 |
| Msa0715060 | Msa0742740 | 0.810498 | 1.119036e-50 | -8.615850e-47 |
| Msa0715060 | Msa0768990 | 0.807282 | 5.455426e-50 | -8.615850e-47 |
| Msa0715060 | Msa0783530 | 0.800099 | 1.689033e-48 | -8.615850e-47 |
| Msa0715060 | Msa0794290 | 0.850954 | 1.215667e-60 | -8.615850e-47 |
| Msa0715060 | Msa0795870 | 0.834039 | 3.774681e-56 | -8.615850e-47 |
| Msa0715060 | Msa0805330 | 0.802151 | 6.428909e-49 | -8.615850e-47 |
| Msa0715060 | Msa0823820 | 0.805120 | 1.556299e-49 | -8.615850e-47 |
| Msa0715060 | Msa0831720 | 0.863066 | 3.244309e-64 | -8.615850e-47 |
| Msa0715060 | Msa0833530 | 0.834599 | 2.731279e-56 | -8.615850e-47 |
| Msa0715060 | Msa0833650 | 0.839557 | 1.475256e-57 | -8.615850e-47 |
| Msa0715060 | Msa0855830 | 0.815109 | 1.093828e-51 | -8.615850e-47 |
| Msa0715060 | Msa0861510 | 0.827794 | 1.285135e-54 | -8.615850e-47 |
| Msa0715060 | Msa0861530 | 0.809175 | 2.154182e-50 | -8.615850e-47 |
| Msa0715060 | Msa0861600 | 0.830500 | 2.835720e-55 | -8.615850e-47 |
| Msa0715060 | Msa0876310 | 0.804578 | 2.019893e-49 | -8.615850e-47 |
| Msa0715060 | Msa0945190 | 0.850640 | 1.489602e-60 | -8.615850e-47 |
| Msa0715060 | Msa0967380 | 0.811539 | 6.655618e-51 | -8.615850e-47 |
| Msa0715060 | Msa1000920 | 0.806480 | 8.061023e-50 | -8.615850e-47 |
| Msa0715060 | Msa1011530 | 0.805837 | 1.100687e-49 | -8.615850e-47 |
| Msa0715060 | Msa1028280 | 0.820053 | 8.403117e-53 | -8.615850e-47 |
| Msa0715060 | Msa1034500 | 0.801711 | 7.915694e-49 | -8.615850e-47 |
| Msa0715060 | Msa1042160 | 0.803832 | 2.888548e-49 | -8.615850e-47 |
| Msa0715060 | Msa1042190 | 0.807271 | 5.485002e-50 | -8.615850e-47 |
| Msa0715060 | Msa1043370 | 0.800073 | 1.710385e-48 | -8.615850e-47 |
| Msa0715060 | Msa1050960 | 0.802964 | 4.369721e-49 | -8.615850e-47 |
| Msa0715060 | Msa1061980 | 0.808131 | 3.600542e-50 | -8.615850e-47 |
| Msa0715060 | Msa1072940 | 0.838108 | 3.497578e-57 | -8.615850e-47 |
| Msa0715060 | Msa1074220 | 0.824839 | 6.495024e-54 | -8.615850e-47 |
| Msa0715060 | Msa1085330 | 0.825041 | 5.818731e-54 | -8.615850e-47 |
| Msa0715060 | Msa1089450 | 0.806823 | 6.820614e-50 | -8.615850e-47 |
| Msa0715060 | Msa1111380 | 0.815918 | 7.226473e-52 | -8.615850e-47 |
| Msa0715060 | Msa1132840 | 0.834426 | 3.017305e-56 | -8.615850e-47 |
| Msa0715060 | Msa1145580 | 0.818879 | 1.556824e-52 | -8.615850e-47 |
| Msa0715060 | Msa1145810 | 0.823369 | 1.437469e-53 | -8.615850e-47 |
| Msa0715060 | Msa1155170 | -0.817760 | 2.790554e-52 | -8.615850e-47 |
| Msa0715060 | Msa1160920 | 0.850610 | 1.519410e-60 | -8.615850e-47 |
| Msa0715060 | Msa1162770 | 0.800648 | 1.305849e-48 | -8.615850e-47 |
| Msa0715060 | Msa1167470 | 0.803278 | 3.761533e-49 | -8.615850e-47 |
| Msa0715060 | Msa1192570 | 0.815802 | 7.668495e-52 | -8.615850e-47 |
| Msa0715060 | Msa1200890 | 0.821175 | 4.642512e-53 | -8.615850e-47 |
| Msa0715060 | Msa1208160 | 0.807913 | 4.007628e-50 | -8.615850e-47 |
| Msa0715060 | Msa1208430 | 0.810163 | 1.321646e-50 | -8.615850e-47 |
| Msa0715060 | Msa1209450 | 0.819258 | 1.276658e-52 | -8.615850e-47 |
| Msa0715060 | Msa1219000 | 0.802455 | 5.563849e-49 | -8.615850e-47 |
| Msa0715060 | Msa1225860 | -0.824228 | 9.042447e-54 | -8.615850e-47 |
| Msa0715060 | Msa1226520 | 0.805969 | 1.032457e-49 | -8.615850e-47 |
| Msa0715060 | Msa1228200 | 0.810671 | 1.026577e-50 | -8.615850e-47 |
| Msa0715060 | Msa1236410 | 0.810564 | 1.082798e-50 | -8.615850e-47 |
| Msa0715060 | Msa1253550 | 0.816557 | 5.200289e-52 | -8.615850e-47 |
| Msa0715060 | Msa1263490 | 0.802770 | 4.791027e-49 | -8.615850e-47 |
| Msa0715060 | Msa1267770 | 0.801324 | 9.501488e-49 | -8.615850e-47 |
| Msa0715060 | Msa1268240 | 0.811303 | 7.488462e-51 | -8.615850e-47 |
| Msa0715060 | Msa1275450 | 0.807655 | 4.545761e-50 | -8.615850e-47 |
| Msa0715060 | Msa1276660 | 0.811310 | 7.463461e-51 | -8.615850e-47 |
| Msa0715060 | Msa1277150 | 0.817665 | 2.931456e-52 | -8.615850e-47 |
| Msa0715060 | Msa1277220 | 0.803931 | 2.754100e-49 | -8.615850e-47 |
| Msa0715060 | Msa1297230 | 0.805416 | 1.349280e-49 | -8.615850e-47 |
| Msa0715060 | Msa1298370 | 0.824476 | 7.905206e-54 | -8.615850e-47 |
| Msa0715060 | Msa1303560 | 0.800388 | 1.475422e-48 | -8.615850e-47 |
| Msa0715060 | Msa1316330 | 0.804939 | 1.697613e-49 | -8.615850e-47 |
| Msa0715060 | Msa1320670 | 0.806086 | 9.758247e-50 | -8.615850e-47 |
| Msa0715060 | Msa1330420 | 0.834873 | 2.329728e-56 | -8.615850e-47 |
| Msa0715060 | Msa1341840 | 0.801287 | 9.670025e-49 | -8.615850e-47 |
| Msa0715060 | Msa1343430 | 0.803066 | 4.162668e-49 | -8.615850e-47 |
| Msa0715060 | Msa1346560 | 0.819379 | 1.198137e-52 | -8.615850e-47 |
| Msa0715060 | Msa1348090 | 0.828832 | 7.220869e-55 | -8.615850e-47 |
| Msa0715060 | Msa1356830 | 0.847430 | 1.162285e-59 | -8.615850e-47 |
| Msa0715060 | Msa1369150 | 0.802191 | 6.306147e-49 | -8.615850e-47 |
| Msa0715060 | Msa1371520 | 0.821355 | 4.219889e-53 | -8.615850e-47 |
| Msa0715060 | Msa1392580 | 0.801419 | 9.084529e-49 | -8.615850e-47 |
| Msa0715060 | Msa1393820 | 0.802700 | 4.953325e-49 | -8.615850e-47 |
| Msa0715060 | Msa1397400 | 0.818978 | 1.477982e-52 | -8.615850e-47 |
| Msa0715060 | Msa1403710 | 0.812969 | 3.244419e-51 | -8.615850e-47 |
| Msa0715060 | Msa1412000 | 0.850427 | 1.709727e-60 | -8.615850e-47 |
| Msa0715060 | Msa1418240 | 0.823489 | 1.347929e-53 | -8.615850e-47 |
| Msa0715060 | Msa1420950 | 0.807860 | 4.111732e-50 | -8.615850e-47 |
| Msa0715060 | Msa1425880 | 0.801357 | 9.355356e-49 | -8.615850e-47 |
| Msa0715060 | Msa1427110 | 0.825234 | 5.238526e-54 | -8.615850e-47 |
| Msa0715060 | Msa1432500 | 0.804692 | 1.912415e-49 | -8.615850e-47 |
| Msa0715060 | Msa1437940 | 0.831610 | 1.514458e-55 | -8.615850e-47 |
| Msa0715060 | Msa1438280 | 0.811053 | 8.487333e-51 | -8.615850e-47 |
| Msa0715060 | Msa1440310 | 0.812155 | 4.888531e-51 | -8.615850e-47 |
| Msa0715060 | Msa1440880 | 0.804970 | 1.672508e-49 | -8.615850e-47 |
| Msa0715060 | Msa1440960 | 0.828865 | 7.089790e-55 | -8.615850e-47 |
| Msa0715060 | Msa1446810 | 0.814351 | 1.610475e-51 | -8.615850e-47 |
| Msa0715060 | Msa1461370 | 0.800273 | 1.557402e-48 | -8.615850e-47 |
| Msa0136650 | Msa0715060 | 0.821423 | 4.070888e-53 | -8.615850e-47 |
| Msa0138360 | Msa0715060 | 0.819315 | 1.238554e-52 | -8.615850e-47 |
| Msa0144360 | Msa0715060 | 0.809895 | 1.509054e-50 | -8.615850e-47 |
| Msa0173540 | Msa0715060 | 0.820468 | 6.751588e-53 | -8.615850e-47 |
| Msa0173890 | Msa0715060 | 0.830569 | 2.727428e-55 | -8.615850e-47 |
| Msa0174450 | Msa0715060 | 0.853387 | 2.470986e-61 | -8.615850e-47 |
| Msa0221000 | Msa0715060 | 0.850915 | 1.246409e-60 | -8.615850e-47 |
| Msa0225100 | Msa0715060 | 0.809856 | 1.538363e-50 | -8.615850e-47 |
| Msa0225480 | Msa0715060 | 0.809563 | 1.779086e-50 | -8.615850e-47 |
| Msa0225860 | Msa0715060 | 0.830979 | 2.163895e-55 | -8.615850e-47 |
| Msa0237210 | Msa0715060 | 0.809587 | 1.757523e-50 | -8.615850e-47 |
| Msa0369790 | Msa0715060 | 0.843284 | 1.540654e-58 | -8.615850e-47 |
| Msa0378720 | Msa0715060 | 0.858553 | 7.614763e-63 | -8.615850e-47 |
| Msa0380620 | Msa0715060 | 0.809714 | 1.650936e-50 | -8.615850e-47 |
| Msa0424160 | Msa0715060 | 0.812974 | 3.236367e-51 | -8.615850e-47 |
| Msa0428370 | Msa0715060 | 0.838598 | 2.614700e-57 | -8.615850e-47 |
| Msa0428920 | Msa0715060 | 0.804170 | 2.456352e-49 | -8.615850e-47 |
| Msa0430260 | Msa0715060 | 0.823609 | 1.263043e-53 | -8.615850e-47 |
| Msa0435420 | Msa0715060 | 0.812593 | 3.921863e-51 | -8.615850e-47 |
| Msa0450400 | Msa0715060 | -0.808017 | 3.807828e-50 | -8.615850e-47 |
| Msa0464000 | Msa0715060 | 0.840147 | 1.036075e-57 | -8.615850e-47 |
| Msa0474730 | Msa0715060 | 0.857403 | 1.671952e-62 | -8.615850e-47 |
| Msa0479200 | Msa0715060 | 0.807767 | 4.303148e-50 | -8.615850e-47 |
| Msa0240900 | Msa0715060 | 0.803741 | 3.015674e-49 | -8.615850e-47 |
| Msa0241830 | Msa0715060 | 0.817745 | 2.811717e-52 | -8.615850e-47 |
| Msa0244640 | Msa0715060 | 0.817873 | 2.631395e-52 | -8.615850e-47 |
| Msa0247940 | Msa0715060 | 0.802085 | 6.630544e-49 | -8.615850e-47 |
| Msa0260510 | Msa0715060 | 0.824515 | 7.743700e-54 | -8.615850e-47 |
| Msa0263080 | Msa0715060 | 0.807094 | 5.978628e-50 | -8.615850e-47 |
| Msa0265850 | Msa0715060 | 0.818339 | 2.063655e-52 | -8.615850e-47 |
| Msa0266180 | Msa0715060 | 0.804418 | 2.180716e-49 | -8.615850e-47 |
| Msa0275770 | Msa0715060 | 0.808632 | 2.815208e-50 | -8.615850e-47 |
| Msa0279850 | Msa0715060 | 0.823458 | 1.370599e-53 | -8.615850e-47 |
| Msa0283330 | Msa0715060 | 0.808239 | 3.414691e-50 | -8.615850e-47 |
| Msa0292400 | Msa0715060 | 0.805434 | 1.337633e-49 | -8.615850e-47 |
| Msa0300270 | Msa0715060 | 0.829770 | 4.273114e-55 | -8.615850e-47 |
| Msa0300320 | Msa0715060 | 0.856513 | 3.057833e-62 | -8.615850e-47 |
| Msa0307270 | Msa0715060 | 0.859573 | 3.765952e-63 | -8.615850e-47 |
| Msa0315690 | Msa0715060 | 0.805873 | 1.081987e-49 | -8.615850e-47 |
| Msa0317970 | Msa0715060 | 0.803286 | 3.748757e-49 | -8.615850e-47 |
| Msa0321620 | Msa0715060 | 0.811056 | 8.473732e-51 | -8.615850e-47 |
| Msa0322900 | Msa0715060 | 0.833750 | 4.456702e-56 | -8.615850e-47 |
| Msa0337700 | Msa0715060 | 0.818949 | 1.500971e-52 | -8.615850e-47 |
| Msa0340500 | Msa0715060 | 0.807382 | 5.193583e-50 | -8.615850e-47 |
| Msa0341690 | Msa0715060 | 0.848968 | 4.370716e-60 | -8.615850e-47 |
| Msa0358890 | Msa0715060 | 0.800503 | 1.398081e-48 | -8.615850e-47 |
| Msa0483100 | Msa0715060 | 0.800686 | 1.282578e-48 | -8.615850e-47 |
| Msa0485240 | Msa0715060 | 0.828607 | 8.182004e-55 | -8.615850e-47 |
| Msa0500380 | Msa0715060 | 0.821555 | 3.794687e-53 | -8.615850e-47 |
| Msa0509550 | Msa0715060 | 0.844929 | 5.575944e-59 | -8.615850e-47 |
| Msa0515800 | Msa0715060 | 0.804127 | 2.507488e-49 | -8.615850e-47 |
| Msa0518030 | Msa0715060 | 0.803745 | 3.010211e-49 | -8.615850e-47 |
| Msa0519760 | Msa0715060 | 0.826225 | 3.049434e-54 | -8.615850e-47 |
| Msa0519810 | Msa0715060 | 0.804613 | 1.985831e-49 | -8.615850e-47 |
| Msa0519840 | Msa0715060 | 0.823473 | 1.359449e-53 | -8.615850e-47 |
| Msa0527190 | Msa0715060 | 0.819123 | 1.370313e-52 | -8.615850e-47 |
| Msa0580370 | Msa0715060 | 0.835667 | 1.468646e-56 | -8.615850e-47 |
| Msa0582480 | Msa0715060 | 0.812513 | 4.082358e-51 | -8.615850e-47 |
| Msa0583360 | Msa0715060 | -0.825773 | 3.905046e-54 | -8.615850e-47 |
| Msa0586220 | Msa0715060 | 0.804746 | 1.863455e-49 | -8.615850e-47 |
| Msa0601950 | Msa0715060 | 0.820832 | 5.567540e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715060 | MtrunA17_Chr5g0394371 | 94.152 | 171 | 2 | 1 | 1 | 171 | 1 | 163 | 2.51e-117 | 335 |
| Msa0715060 | MtrunA17_Chr1g0150851 | 69.065 | 139 | 43 | 0 | 33 | 171 | 42 | 180 | 5.40e-69 | 213 |
| Msa0715060 | MtrunA17_Chr8g0365071 | 34.911 | 169 | 100 | 4 | 8 | 169 | 25 | 190 | 1.98e-24 | 97.1 |
| Msa0715060 | MtrunA17_Chr5g0413701 | 37.815 | 119 | 74 | 0 | 50 | 168 | 72 | 190 | 3.13e-23 | 94.0 |
| Msa0715060 | MtrunA17_Chr3g0117881 | 34.167 | 120 | 79 | 0 | 50 | 169 | 61 | 180 | 2.86e-21 | 88.6 |
| Msa0715060 | MtrunA17_Chr3g0126551 | 36.036 | 111 | 71 | 0 | 59 | 169 | 95 | 205 | 1.38e-14 | 70.1 |
| Msa0715060 | MtrunA17_Chr1g0158851 | 35.345 | 116 | 75 | 0 | 54 | 169 | 95 | 210 | 1.24e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715060 | AT5G19530.1 | 61.047 | 172 | 65 | 2 | 1 | 171 | 1 | 171 | 3.47e-72 | 221 |
| Msa0715060 | AT5G19530.2 | 61.963 | 163 | 61 | 1 | 9 | 171 | 3 | 164 | 8.85e-72 | 219 |
| Msa0715060 | AT1G23820.1 | 37.398 | 123 | 77 | 0 | 50 | 172 | 64 | 186 | 6.04e-25 | 99.0 |
| Msa0715060 | AT1G23820.2 | 38.655 | 119 | 73 | 0 | 50 | 168 | 108 | 226 | 8.21e-25 | 98.2 |
| Msa0715060 | AT1G70310.1 | 36.667 | 120 | 76 | 0 | 50 | 169 | 68 | 187 | 1.11e-23 | 95.5 |
| Msa0715060 | AT5G53120.7 | 34.167 | 120 | 79 | 0 | 50 | 169 | 104 | 223 | 8.95e-15 | 71.2 |
| Msa0715060 | AT5G53120.1 | 34.167 | 120 | 79 | 0 | 50 | 169 | 87 | 206 | 1.16e-14 | 70.9 |
| Msa0715060 | AT5G53120.4 | 34.167 | 120 | 79 | 0 | 50 | 169 | 87 | 206 | 1.16e-14 | 70.9 |
| Msa0715060 | AT5G53120.2 | 34.167 | 120 | 79 | 0 | 50 | 169 | 87 | 206 | 1.16e-14 | 70.9 |
| Msa0715060 | AT5G53120.5 | 34.167 | 120 | 79 | 0 | 50 | 169 | 87 | 206 | 1.16e-14 | 70.9 |
| Msa0715060 | AT5G53120.3 | 34.167 | 120 | 79 | 0 | 50 | 169 | 87 | 206 | 1.16e-14 | 70.9 |
| Msa0715060 | AT5G53120.6 | 27.891 | 147 | 79 | 2 | 50 | 169 | 87 | 233 | 3.45e-11 | 60.8 |
Find 54 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTATTAGCAATGGCATTAA+TGG | 0.267235 | 5_1:-7928588 | Msa0715060:CDS |
| AGTAGTTTGTTGTGATGTTA+TGG | 0.332004 | 5_1:+7928708 | None:intergenic |
| ATATTATACCCTCCCTAGTT+AGG | 0.348801 | 5_1:+7928916 | None:intergenic |
| ATTCACCACCTAATGGTTAT+AGG | 0.379554 | 5_1:-7928548 | Msa0715060:CDS |
| TGAGAGCAAAGCACCATCTA+AGG | 0.385224 | 5_1:+7928490 | None:intergenic |
| GGGAAGTAATTATTGATAGC+TGG | 0.386890 | 5_1:+7928782 | None:intergenic |
| GTACCAAGACATTGCATTGT+TGG | 0.386982 | 5_1:-7927866 | Msa0715060:CDS |
| TTGCAGGCATTAGTACTTGA+TGG | 0.389576 | 5_1:-7927726 | Msa0715060:intron |
| GATGGTGCTTTGCTCTCAAT+AGG | 0.407800 | 5_1:-7928485 | Msa0715060:intron |
| AAGCAAAATAAAATCCTCAT+TGG | 0.425731 | 5_1:+7928842 | None:intergenic |
| CAGCTCTTCCTATAACCATT+AGG | 0.431490 | 5_1:+7928540 | None:intergenic |
| GGAAGTAATTATTGATAGCT+GGG | 0.434182 | 5_1:+7928783 | None:intergenic |
| GATAAGATACGGTCCTAACT+AGG | 0.447008 | 5_1:-7928929 | Msa0715060:five_prime_UTR |
| TATAAGAAGGAGAAATGAAA+GGG | 0.454430 | 5_1:+7928762 | None:intergenic |
| GTAGCTTACACAAATGGAAA+TGG | 0.460506 | 5_1:-7928609 | Msa0715060:CDS |
| TATAACCATTAGGTGGTGAA+TGG | 0.470001 | 5_1:+7928550 | None:intergenic |
| GGTGAAGTAGCTTACACAAA+TGG | 0.475512 | 5_1:-7928615 | Msa0715060:CDS |
| CGACTTCAAGTCTCGAATCA+TGG | 0.476256 | 5_1:+7927306 | None:intergenic |
| AAAAGCCATTCACCACCTAA+TGG | 0.481909 | 5_1:-7928555 | Msa0715060:CDS |
| GGCTGCAGCATCTTGCATAC+AGG | 0.485641 | 5_1:-7927898 | Msa0715060:intron |
| CTGGATGAACAAGACATTCA+TGG | 0.492460 | 5_1:+7927667 | None:intergenic |
| TTTATTATGGGAGGAGGAGA+AGG | 0.494945 | 5_1:-7927525 | Msa0715060:CDS |
| TTGTTGGACACAAAGCCCTT+TGG | 0.495311 | 5_1:-7927850 | Msa0715060:CDS |
| AGATTGAAGAGAACCTTAGA+TGG | 0.508186 | 5_1:-7928503 | Msa0715060:CDS |
| ATGAGAGATCGTATATAAGA+AGG | 0.513407 | 5_1:+7928749 | None:intergenic |
| TTCTTCTTAGTTGTGATCAA+AGG | 0.514924 | 5_1:-7928648 | Msa0715060:five_prime_UTR |
| AGTAAAGGATATACATAGGA+TGG | 0.521052 | 5_1:+7927634 | None:intergenic |
| ACAATGCAATGTCTTGGTAC+TGG | 0.522446 | 5_1:+7927869 | None:intergenic |
| ATAGGATGGTGAAGAAGAGC+TGG | 0.523873 | 5_1:+7927648 | None:intergenic |
| TGCAGGCATTAGTACTTGAT+GGG | 0.528350 | 5_1:-7927725 | Msa0715060:intron |
| TATATAAGAACCTTGCCAAA+GGG | 0.534318 | 5_1:+7927835 | None:intergenic |
| CTACTGCAAGGGAACTGCTC+AGG | 0.545339 | 5_1:-7927500 | Msa0715060:CDS |
| AATGGAAATGGTATTAGCAA+TGG | 0.547033 | 5_1:-7928597 | Msa0715060:CDS |
| GTTTGTTGTGATGTTATGGA+TGG | 0.550634 | 5_1:+7928712 | None:intergenic |
| TAAGAAATGAAGATAAGATA+CGG | 0.567425 | 5_1:-7928940 | None:intergenic |
| ATATAAGAAGGAGAAATGAA+AGG | 0.569546 | 5_1:+7928761 | None:intergenic |
| GGACACAAAGCCCTTTGGCA+AGG | 0.572609 | 5_1:-7927845 | Msa0715060:intron |
| TTATATAAGAACCTTGCCAA+AGG | 0.576445 | 5_1:+7927834 | None:intergenic |
| ATAAGATACGGTCCTAACTA+GGG | 0.584903 | 5_1:-7928928 | Msa0715060:five_prime_UTR |
| AATACATTACACACTGCGTG+CGG | 0.594705 | 5_1:+7928879 | None:intergenic |
| ATACATTACACACTGCGTGC+GGG | 0.595018 | 5_1:+7928880 | None:intergenic |
| TGTCCAACAATGCAATGTCT+TGG | 0.599107 | 5_1:+7927863 | None:intergenic |
| AGCTGGGAAATCTAGCAAAG+TGG | 0.604706 | 5_1:+7928799 | None:intergenic |
| GAGGAGAAGGATCTACTGCA+AGG | 0.605519 | 5_1:-7927512 | Msa0715060:CDS |
| ATCATACTTAGTTGTAAACA+AGG | 0.614887 | 5_1:-7927336 | Msa0715060:CDS |
| ATTAGCAATGGCATTAATGG+AGG | 0.617370 | 5_1:-7928585 | Msa0715060:CDS |
| ATGGTTATAGGAAGAGCTGT+TGG | 0.622549 | 5_1:-7928536 | Msa0715060:CDS |
| AGGAGAAGGATCTACTGCAA+GGG | 0.631605 | 5_1:-7927511 | Msa0715060:CDS |
| GATACGGTCCTAACTAGGGA+GGG | 0.633478 | 5_1:-7928924 | Msa0715060:five_prime_UTR |
| GTACTTTACGAAAACCAATG+AGG | 0.636929 | 5_1:-7928856 | Msa0715060:five_prime_UTR |
| AGATACGGTCCTAACTAGGG+AGG | 0.644379 | 5_1:-7928925 | Msa0715060:five_prime_UTR |
| AAGTCGTCATCAACGACGCG+AGG | 0.657834 | 5_1:-7927289 | Msa0715060:CDS |
| CTCTTCCTATAACCATTAGG+TGG | 0.661521 | 5_1:+7928543 | None:intergenic |
| TGTAATGTGTGACATTGATG+AGG | 0.706772 | 5_1:-7927457 | Msa0715060:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATGTAAACTATAATA+TGG | + | chr5_1:7927849-7927868 | None:intergenic | 10.0% |
| !! | TATTTATGTAAACTATAATA+TGG | + | chr5_1:7927849-7927868 | None:intergenic | 10.0% |
| !!! | ACTATAATATGGTTTTTTTT+TGG | + | chr5_1:7927838-7927857 | None:intergenic | 15.0% |
| !!! | ACTTTTTATTCTATTTGTTT+TGG | - | chr5_1:7928287-7928306 | Msa0715060:intron | 15.0% |
| !!! | AATACTTTTCTTATAAGTAA+AGG | + | chr5_1:7928416-7928435 | None:intergenic | 15.0% |
| !!! | CCAAAAAATGTTTTTATTAT+GGG | - | chr5_1:7928674-7928693 | Msa0715060:five_prime_UTR | 15.0% |
| !! | ATTAATTTATTGATGTTTGA+TGG | - | chr5_1:7928826-7928845 | Msa0715060:five_prime_UTR | 15.0% |
| !!! | ACTATAATATGGTTTTTTTT+TGG | + | chr5_1:7927838-7927857 | None:intergenic | 15.0% |
| !!! | ACTTTTTATTCTATTTGTTT+TGG | - | chr5_1:7928287-7928306 | Msa0715060:intron | 15.0% |
| !!! | AATACTTTTCTTATAAGTAA+AGG | + | chr5_1:7928416-7928435 | None:intergenic | 15.0% |
| !!! | CCAAAAAATGTTTTTATTAT+GGG | - | chr5_1:7928674-7928693 | Msa0715060:five_prime_UTR | 15.0% |
| !! | ATTAATTTATTGATGTTTGA+TGG | - | chr5_1:7928826-7928845 | Msa0715060:five_prime_UTR | 15.0% |
| !!! | ACAAAAAATGGACAAAATTT+TGG | + | chr5_1:7928077-7928096 | None:intergenic | 20.0% |
| !! | CTAGCTAAAAAAACAAAAAA+TGG | + | chr5_1:7928089-7928108 | None:intergenic | 20.0% |
| !!! | TTTTATTCTATTTGTTTTGG+TGG | - | chr5_1:7928290-7928309 | Msa0715060:intron | 20.0% |
| !!! | TTTATTCTATTTGTTTTGGT+GGG | - | chr5_1:7928291-7928310 | Msa0715060:intron | 20.0% |
| !! | TAACATAGTAGATAATTAAG+TGG | + | chr5_1:7928458-7928477 | None:intergenic | 20.0% |
| !!! | TATTTTTCATTCCATTTTCA+AGG | - | chr5_1:7928651-7928670 | Msa0715060:five_prime_UTR | 20.0% |
| !!! | GCCAAAAAATGTTTTTATTA+TGG | - | chr5_1:7928673-7928692 | Msa0715060:five_prime_UTR | 20.0% |
| !!! | CCCATAATAAAAACATTTTT+TGG | + | chr5_1:7928677-7928696 | None:intergenic | 20.0% |
| !!! | AAAAATGTTTTTATTATGGG+AGG | - | chr5_1:7928677-7928696 | Msa0715060:five_prime_UTR | 20.0% |
| !!! | TTTTTGTTTACAATTTCAAG+TGG | - | chr5_1:7928798-7928817 | Msa0715060:five_prime_UTR | 20.0% |
| !!! | ACAAAAAATGGACAAAATTT+TGG | + | chr5_1:7928077-7928096 | None:intergenic | 20.0% |
| !! | CTAGCTAAAAAAACAAAAAA+TGG | + | chr5_1:7928089-7928108 | None:intergenic | 20.0% |
| !!! | TTTTATTCTATTTGTTTTGG+TGG | - | chr5_1:7928290-7928309 | Msa0715060:intron | 20.0% |
| !!! | TTTATTCTATTTGTTTTGGT+GGG | - | chr5_1:7928291-7928310 | Msa0715060:intron | 20.0% |
| !! | TAACATAGTAGATAATTAAG+TGG | + | chr5_1:7928458-7928477 | None:intergenic | 20.0% |
| !!! | TATTTTTCATTCCATTTTCA+AGG | - | chr5_1:7928651-7928670 | Msa0715060:five_prime_UTR | 20.0% |
| !!! | GCCAAAAAATGTTTTTATTA+TGG | - | chr5_1:7928673-7928692 | Msa0715060:five_prime_UTR | 20.0% |
| !!! | CCCATAATAAAAACATTTTT+TGG | + | chr5_1:7928677-7928696 | None:intergenic | 20.0% |
| !!! | AAAAATGTTTTTATTATGGG+AGG | - | chr5_1:7928677-7928696 | Msa0715060:five_prime_UTR | 20.0% |
| !!! | TTTTTGTTTACAATTTCAAG+TGG | - | chr5_1:7928798-7928817 | Msa0715060:five_prime_UTR | 20.0% |
| ! | AAGCAAAATAAAATCCTCAT+TGG | + | chr5_1:7927372-7927391 | None:intergenic | 25.0% |
| ! | TATAAGAAGGAGAAATGAAA+GGG | + | chr5_1:7927452-7927471 | None:intergenic | 25.0% |
| ! | ATATAAGAAGGAGAAATGAA+AGG | + | chr5_1:7927453-7927472 | None:intergenic | 25.0% |
| ! | CTACTATCTTCCTTTATATA+TGG | - | chr5_1:7927895-7927914 | Msa0715060:intron | 25.0% |
| !!! | TTCATGTTGTTTCTTTTAGA+AGG | - | chr5_1:7927942-7927961 | Msa0715060:intron | 25.0% |
| !! | ATACTCTTTTTGCCTTTATT+TGG | - | chr5_1:7928141-7928160 | Msa0715060:intron | 25.0% |
| !!! | TTATTCTATTTGTTTTGGTG+GGG | - | chr5_1:7928292-7928311 | Msa0715060:intron | 25.0% |
| ! | ATCATACTTAGTTGTAAACA+AGG | - | chr5_1:7928875-7928894 | Msa0715060:five_prime_UTR | 25.0% |
| ! | AAGCAAAATAAAATCCTCAT+TGG | + | chr5_1:7927372-7927391 | None:intergenic | 25.0% |
| ! | TATAAGAAGGAGAAATGAAA+GGG | + | chr5_1:7927452-7927471 | None:intergenic | 25.0% |
| ! | ATATAAGAAGGAGAAATGAA+AGG | + | chr5_1:7927453-7927472 | None:intergenic | 25.0% |
| ! | CTACTATCTTCCTTTATATA+TGG | - | chr5_1:7927895-7927914 | Msa0715060:intron | 25.0% |
| !!! | TTCATGTTGTTTCTTTTAGA+AGG | - | chr5_1:7927942-7927961 | Msa0715060:intron | 25.0% |
| !! | ATACTCTTTTTGCCTTTATT+TGG | - | chr5_1:7928141-7928160 | Msa0715060:intron | 25.0% |
| !!! | TTATTCTATTTGTTTTGGTG+GGG | - | chr5_1:7928292-7928311 | Msa0715060:intron | 25.0% |
| ! | ATCATACTTAGTTGTAAACA+AGG | - | chr5_1:7928875-7928894 | Msa0715060:five_prime_UTR | 25.0% |
| ! | GGAAGTAATTATTGATAGCT+GGG | + | chr5_1:7927431-7927450 | None:intergenic | 30.0% |
| ATGAGAGATCGTATATAAGA+AGG | + | chr5_1:7927465-7927484 | None:intergenic | 30.0% | |
| !! | AGTAGTTTGTTGTGATGTTA+TGG | + | chr5_1:7927506-7927525 | None:intergenic | 30.0% |
| TTCTTCTTAGTTGTGATCAA+AGG | - | chr5_1:7927563-7927582 | Msa0715060:intron | 30.0% | |
| TGTGATCAAAGGAAAAAAGA+TGG | - | chr5_1:7927574-7927593 | Msa0715060:intron | 30.0% | |
| GTGATCAAAGGAAAAAAGAT+GGG | - | chr5_1:7927575-7927594 | Msa0715060:intron | 30.0% | |
| AATGGAAATGGTATTAGCAA+TGG | - | chr5_1:7927614-7927633 | Msa0715060:intron | 30.0% | |
| !!! | TTTGGTAGCTTTTTCATTCT+TGG | + | chr5_1:7927820-7927839 | None:intergenic | 30.0% |
| CTATCTTCCTTTATATATGG+CGG | - | chr5_1:7927898-7927917 | Msa0715060:intron | 30.0% | |
| TGAAAAGATAATAGAAGCCA+AGG | - | chr5_1:7927969-7927988 | Msa0715060:intron | 30.0% | |
| !! | CCTTTTTCATAGCCAAATAA+AGG | + | chr5_1:7928156-7928175 | None:intergenic | 30.0% |
| ! | CCTTTATTTGGCTATGAAAA+AGG | - | chr5_1:7928153-7928172 | Msa0715060:intron | 30.0% |
| TATATAAGAACCTTGCCAAA+GGG | + | chr5_1:7928379-7928398 | None:intergenic | 30.0% | |
| TTATATAAGAACCTTGCCAA+AGG | + | chr5_1:7928380-7928399 | None:intergenic | 30.0% | |
| ! | ACTATGTTACATACTTTTGC+AGG | - | chr5_1:7928469-7928488 | Msa0715060:intron | 30.0% |
| AGTAAAGGATATACATAGGA+TGG | + | chr5_1:7928580-7928599 | None:intergenic | 30.0% | |
| GAAGAGTAAAGGATATACAT+AGG | + | chr5_1:7928584-7928603 | None:intergenic | 30.0% | |
| CAATCATTGAAGAAGAGTAA+AGG | + | chr5_1:7928595-7928614 | None:intergenic | 30.0% | |
| ATGAAAAAATGTTCAAGTGC+TGG | + | chr5_1:7928627-7928646 | None:intergenic | 30.0% | |
| !!! | ACATTTTTTGGCCTTGAAAA+TGG | + | chr5_1:7928665-7928684 | None:intergenic | 30.0% |
| !! | AATGTTTTTATTATGGGAGG+AGG | - | chr5_1:7928680-7928699 | Msa0715060:five_prime_UTR | 30.0% |
| TATTGATGTTTGATGGAAAC+AGG | - | chr5_1:7928833-7928852 | Msa0715060:five_prime_UTR | 30.0% | |
| ! | GGAAGTAATTATTGATAGCT+GGG | + | chr5_1:7927431-7927450 | None:intergenic | 30.0% |
| ATGAGAGATCGTATATAAGA+AGG | + | chr5_1:7927465-7927484 | None:intergenic | 30.0% | |
| !! | AGTAGTTTGTTGTGATGTTA+TGG | + | chr5_1:7927506-7927525 | None:intergenic | 30.0% |
| TTCTTCTTAGTTGTGATCAA+AGG | - | chr5_1:7927563-7927582 | Msa0715060:intron | 30.0% | |
| TGTGATCAAAGGAAAAAAGA+TGG | - | chr5_1:7927574-7927593 | Msa0715060:intron | 30.0% | |
| GTGATCAAAGGAAAAAAGAT+GGG | - | chr5_1:7927575-7927594 | Msa0715060:intron | 30.0% | |
| AATGGAAATGGTATTAGCAA+TGG | - | chr5_1:7927614-7927633 | Msa0715060:intron | 30.0% | |
| !!! | TTTGGTAGCTTTTTCATTCT+TGG | + | chr5_1:7927820-7927839 | None:intergenic | 30.0% |
| CTATCTTCCTTTATATATGG+CGG | - | chr5_1:7927898-7927917 | Msa0715060:intron | 30.0% | |
| TGAAAAGATAATAGAAGCCA+AGG | - | chr5_1:7927969-7927988 | Msa0715060:intron | 30.0% | |
| !! | CCTTTTTCATAGCCAAATAA+AGG | + | chr5_1:7928156-7928175 | None:intergenic | 30.0% |
| ! | CCTTTATTTGGCTATGAAAA+AGG | - | chr5_1:7928153-7928172 | Msa0715060:intron | 30.0% |
| TATATAAGAACCTTGCCAAA+GGG | + | chr5_1:7928379-7928398 | None:intergenic | 30.0% | |
| TTATATAAGAACCTTGCCAA+AGG | + | chr5_1:7928380-7928399 | None:intergenic | 30.0% | |
| ! | ACTATGTTACATACTTTTGC+AGG | - | chr5_1:7928469-7928488 | Msa0715060:intron | 30.0% |
| AGTAAAGGATATACATAGGA+TGG | + | chr5_1:7928580-7928599 | None:intergenic | 30.0% | |
| GAAGAGTAAAGGATATACAT+AGG | + | chr5_1:7928584-7928603 | None:intergenic | 30.0% | |
| CAATCATTGAAGAAGAGTAA+AGG | + | chr5_1:7928595-7928614 | None:intergenic | 30.0% | |
| ATGAAAAAATGTTCAAGTGC+TGG | + | chr5_1:7928627-7928646 | None:intergenic | 30.0% | |
| !!! | ACATTTTTTGGCCTTGAAAA+TGG | + | chr5_1:7928665-7928684 | None:intergenic | 30.0% |
| !! | AATGTTTTTATTATGGGAGG+AGG | - | chr5_1:7928680-7928699 | Msa0715060:five_prime_UTR | 30.0% |
| TATTGATGTTTGATGGAAAC+AGG | - | chr5_1:7928833-7928852 | Msa0715060:five_prime_UTR | 30.0% | |
| ATAAGATACGGTCCTAACTA+GGG | - | chr5_1:7927283-7927302 | Msa0715060:CDS | 35.0% | |
| ATATTATACCCTCCCTAGTT+AGG | + | chr5_1:7927298-7927317 | None:intergenic | 35.0% | |
| GTACTTTACGAAAACCAATG+AGG | - | chr5_1:7927355-7927374 | Msa0715060:CDS | 35.0% | |
| ! | GGGAAGTAATTATTGATAGC+TGG | + | chr5_1:7927432-7927451 | None:intergenic | 35.0% |
| !! | GTTTGTTGTGATGTTATGGA+TGG | + | chr5_1:7927502-7927521 | None:intergenic | 35.0% |
| GTAGCTTACACAAATGGAAA+TGG | - | chr5_1:7927602-7927621 | Msa0715060:intron | 35.0% | |
| GGTATTAGCAATGGCATTAA+TGG | - | chr5_1:7927623-7927642 | Msa0715060:intron | 35.0% | |
| ATTAGCAATGGCATTAATGG+AGG | - | chr5_1:7927626-7927645 | Msa0715060:intron | 35.0% | |
| TATAACCATTAGGTGGTGAA+TGG | + | chr5_1:7927664-7927683 | None:intergenic | 35.0% | |
| ATTCACCACCTAATGGTTAT+AGG | - | chr5_1:7927663-7927682 | Msa0715060:CDS | 35.0% | |
| AGATTGAAGAGAACCTTAGA+TGG | - | chr5_1:7927708-7927727 | Msa0715060:CDS | 35.0% | |
| TGTAATGTGTGACATTGATG+AGG | - | chr5_1:7928754-7928773 | Msa0715060:five_prime_UTR | 35.0% | |
| ATAAGATACGGTCCTAACTA+GGG | - | chr5_1:7927283-7927302 | Msa0715060:CDS | 35.0% | |
| ATATTATACCCTCCCTAGTT+AGG | + | chr5_1:7927298-7927317 | None:intergenic | 35.0% | |
| GTACTTTACGAAAACCAATG+AGG | - | chr5_1:7927355-7927374 | Msa0715060:CDS | 35.0% | |
| ! | GGGAAGTAATTATTGATAGC+TGG | + | chr5_1:7927432-7927451 | None:intergenic | 35.0% |
| !! | GTTTGTTGTGATGTTATGGA+TGG | + | chr5_1:7927502-7927521 | None:intergenic | 35.0% |
| GTAGCTTACACAAATGGAAA+TGG | - | chr5_1:7927602-7927621 | Msa0715060:intron | 35.0% | |
| GGTATTAGCAATGGCATTAA+TGG | - | chr5_1:7927623-7927642 | Msa0715060:intron | 35.0% | |
| ATTAGCAATGGCATTAATGG+AGG | - | chr5_1:7927626-7927645 | Msa0715060:intron | 35.0% | |
| TATAACCATTAGGTGGTGAA+TGG | + | chr5_1:7927664-7927683 | None:intergenic | 35.0% | |
| ATTCACCACCTAATGGTTAT+AGG | - | chr5_1:7927663-7927682 | Msa0715060:CDS | 35.0% | |
| AGATTGAAGAGAACCTTAGA+TGG | - | chr5_1:7927708-7927727 | Msa0715060:CDS | 35.0% | |
| TGTAATGTGTGACATTGATG+AGG | - | chr5_1:7928754-7928773 | Msa0715060:five_prime_UTR | 35.0% | |
| GATAAGATACGGTCCTAACT+AGG | - | chr5_1:7927282-7927301 | Msa0715060:CDS | 40.0% | |
| AATACATTACACACTGCGTG+CGG | + | chr5_1:7927335-7927354 | None:intergenic | 40.0% | |
| GGTGAAGTAGCTTACACAAA+TGG | - | chr5_1:7927596-7927615 | Msa0715060:intron | 40.0% | |
| AAAAGCCATTCACCACCTAA+TGG | - | chr5_1:7927656-7927675 | Msa0715060:CDS | 40.0% | |
| CTCTTCCTATAACCATTAGG+TGG | + | chr5_1:7927671-7927690 | None:intergenic | 40.0% | |
| CAGCTCTTCCTATAACCATT+AGG | + | chr5_1:7927674-7927693 | None:intergenic | 40.0% | |
| ATGGTTATAGGAAGAGCTGT+TGG | - | chr5_1:7927675-7927694 | Msa0715060:CDS | 40.0% | |
| CAAAGAGCCGCCATATATAA+AGG | + | chr5_1:7927908-7927927 | None:intergenic | 40.0% | |
| CTTTATATATGGCGGCTCTT+TGG | - | chr5_1:7927906-7927925 | Msa0715060:intron | 40.0% | |
| ATAGAAGCCAAGGAACAAGA+AGG | - | chr5_1:7927979-7927998 | Msa0715060:intron | 40.0% | |
| !! | AAAAGCACCTTCTTGTTCCT+TGG | + | chr5_1:7927989-7928008 | None:intergenic | 40.0% |
| !!! | ACAAGAAGGTGCTTTTCCAT+TGG | - | chr5_1:7927993-7928012 | Msa0715060:intron | 40.0% |
| !!! | CAAGAAGGTGCTTTTCCATT+GGG | - | chr5_1:7927994-7928013 | Msa0715060:intron | 40.0% |
| TTTGTCTCACTCAAACCCAA+TGG | + | chr5_1:7928012-7928031 | None:intergenic | 40.0% | |
| ACAATGCAATGTCTTGGTAC+TGG | + | chr5_1:7928345-7928364 | None:intergenic | 40.0% | |
| GTACCAAGACATTGCATTGT+TGG | - | chr5_1:7928345-7928364 | Msa0715060:intron | 40.0% | |
| TGTCCAACAATGCAATGTCT+TGG | + | chr5_1:7928351-7928370 | None:intergenic | 40.0% | |
| TTGCAGGCATTAGTACTTGA+TGG | - | chr5_1:7928485-7928504 | Msa0715060:intron | 40.0% | |
| TGCAGGCATTAGTACTTGAT+GGG | - | chr5_1:7928486-7928505 | Msa0715060:CDS | 40.0% | |
| CTGGATGAACAAGACATTCA+TGG | + | chr5_1:7928547-7928566 | None:intergenic | 40.0% | |
| TTTATTATGGGAGGAGGAGA+AGG | - | chr5_1:7928686-7928705 | Msa0715060:five_prime_UTR | 40.0% | |
| TGATGTTTGATGGAAACAGG+AGG | - | chr5_1:7928836-7928855 | Msa0715060:five_prime_UTR | 40.0% | |
| GATAAGATACGGTCCTAACT+AGG | - | chr5_1:7927282-7927301 | Msa0715060:CDS | 40.0% | |
| AATACATTACACACTGCGTG+CGG | + | chr5_1:7927335-7927354 | None:intergenic | 40.0% | |
| GGTGAAGTAGCTTACACAAA+TGG | - | chr5_1:7927596-7927615 | Msa0715060:intron | 40.0% | |
| AAAAGCCATTCACCACCTAA+TGG | - | chr5_1:7927656-7927675 | Msa0715060:CDS | 40.0% | |
| CTCTTCCTATAACCATTAGG+TGG | + | chr5_1:7927671-7927690 | None:intergenic | 40.0% | |
| CAGCTCTTCCTATAACCATT+AGG | + | chr5_1:7927674-7927693 | None:intergenic | 40.0% | |
| ATGGTTATAGGAAGAGCTGT+TGG | - | chr5_1:7927675-7927694 | Msa0715060:CDS | 40.0% | |
| CAAAGAGCCGCCATATATAA+AGG | + | chr5_1:7927908-7927927 | None:intergenic | 40.0% | |
| CTTTATATATGGCGGCTCTT+TGG | - | chr5_1:7927906-7927925 | Msa0715060:intron | 40.0% | |
| ATAGAAGCCAAGGAACAAGA+AGG | - | chr5_1:7927979-7927998 | Msa0715060:intron | 40.0% | |
| !! | AAAAGCACCTTCTTGTTCCT+TGG | + | chr5_1:7927989-7928008 | None:intergenic | 40.0% |
| !!! | ACAAGAAGGTGCTTTTCCAT+TGG | - | chr5_1:7927993-7928012 | Msa0715060:intron | 40.0% |
| !!! | CAAGAAGGTGCTTTTCCATT+GGG | - | chr5_1:7927994-7928013 | Msa0715060:intron | 40.0% |
| TTTGTCTCACTCAAACCCAA+TGG | + | chr5_1:7928012-7928031 | None:intergenic | 40.0% | |
| ACAATGCAATGTCTTGGTAC+TGG | + | chr5_1:7928345-7928364 | None:intergenic | 40.0% | |
| GTACCAAGACATTGCATTGT+TGG | - | chr5_1:7928345-7928364 | Msa0715060:intron | 40.0% | |
| TGTCCAACAATGCAATGTCT+TGG | + | chr5_1:7928351-7928370 | None:intergenic | 40.0% | |
| TTGCAGGCATTAGTACTTGA+TGG | - | chr5_1:7928485-7928504 | Msa0715060:intron | 40.0% | |
| TGCAGGCATTAGTACTTGAT+GGG | - | chr5_1:7928486-7928505 | Msa0715060:CDS | 40.0% | |
| CTGGATGAACAAGACATTCA+TGG | + | chr5_1:7928547-7928566 | None:intergenic | 40.0% | |
| TTTATTATGGGAGGAGGAGA+AGG | - | chr5_1:7928686-7928705 | Msa0715060:five_prime_UTR | 40.0% | |
| TGATGTTTGATGGAAACAGG+AGG | - | chr5_1:7928836-7928855 | Msa0715060:five_prime_UTR | 40.0% | |
| ATACATTACACACTGCGTGC+GGG | + | chr5_1:7927334-7927353 | None:intergenic | 45.0% | |
| AGCTGGGAAATCTAGCAAAG+TGG | + | chr5_1:7927415-7927434 | None:intergenic | 45.0% | |
| ! | TGAGAGCAAAGCACCATCTA+AGG | + | chr5_1:7927724-7927743 | None:intergenic | 45.0% |
| GATGGTGCTTTGCTCTCAAT+AGG | - | chr5_1:7927726-7927745 | Msa0715060:intron | 45.0% | |
| TTGTTGGACACAAAGCCCTT+TGG | - | chr5_1:7928361-7928380 | Msa0715060:intron | 45.0% | |
| ATAGGATGGTGAAGAAGAGC+TGG | + | chr5_1:7928566-7928585 | None:intergenic | 45.0% | |
| AGGAGAAGGATCTACTGCAA+GGG | - | chr5_1:7928700-7928719 | Msa0715060:five_prime_UTR | 45.0% | |
| TGTTTGATGGAAACAGGAGG+TGG | - | chr5_1:7928839-7928858 | Msa0715060:five_prime_UTR | 45.0% | |
| CGACTTCAAGTCTCGAATCA+TGG | + | chr5_1:7928908-7928927 | None:intergenic | 45.0% | |
| ATACATTACACACTGCGTGC+GGG | + | chr5_1:7927334-7927353 | None:intergenic | 45.0% | |
| AGCTGGGAAATCTAGCAAAG+TGG | + | chr5_1:7927415-7927434 | None:intergenic | 45.0% | |
| ! | TGAGAGCAAAGCACCATCTA+AGG | + | chr5_1:7927724-7927743 | None:intergenic | 45.0% |
| GATGGTGCTTTGCTCTCAAT+AGG | - | chr5_1:7927726-7927745 | Msa0715060:intron | 45.0% | |
| TTGTTGGACACAAAGCCCTT+TGG | - | chr5_1:7928361-7928380 | Msa0715060:intron | 45.0% | |
| ATAGGATGGTGAAGAAGAGC+TGG | + | chr5_1:7928566-7928585 | None:intergenic | 45.0% | |
| AGGAGAAGGATCTACTGCAA+GGG | - | chr5_1:7928700-7928719 | Msa0715060:five_prime_UTR | 45.0% | |
| TGTTTGATGGAAACAGGAGG+TGG | - | chr5_1:7928839-7928858 | Msa0715060:five_prime_UTR | 45.0% | |
| CGACTTCAAGTCTCGAATCA+TGG | + | chr5_1:7928908-7928927 | None:intergenic | 45.0% | |
| AGATACGGTCCTAACTAGGG+AGG | - | chr5_1:7927286-7927305 | Msa0715060:CDS | 50.0% | |
| GATACGGTCCTAACTAGGGA+GGG | - | chr5_1:7927287-7927306 | Msa0715060:CDS | 50.0% | |
| GAGGAGAAGGATCTACTGCA+AGG | - | chr5_1:7928699-7928718 | Msa0715060:five_prime_UTR | 50.0% | |
| AGATACGGTCCTAACTAGGG+AGG | - | chr5_1:7927286-7927305 | Msa0715060:CDS | 50.0% | |
| GATACGGTCCTAACTAGGGA+GGG | - | chr5_1:7927287-7927306 | Msa0715060:CDS | 50.0% | |
| GAGGAGAAGGATCTACTGCA+AGG | - | chr5_1:7928699-7928718 | Msa0715060:five_prime_UTR | 50.0% | |
| GGCTGCAGCATCTTGCATAC+AGG | - | chr5_1:7928313-7928332 | Msa0715060:intron | 55.0% | |
| GGACACAAAGCCCTTTGGCA+AGG | - | chr5_1:7928366-7928385 | Msa0715060:intron | 55.0% | |
| CTACTGCAAGGGAACTGCTC+AGG | - | chr5_1:7928711-7928730 | Msa0715060:five_prime_UTR | 55.0% | |
| AAGTCGTCATCAACGACGCG+AGG | - | chr5_1:7928922-7928941 | Msa0715060:five_prime_UTR | 55.0% | |
| GGCTGCAGCATCTTGCATAC+AGG | - | chr5_1:7928313-7928332 | Msa0715060:intron | 55.0% | |
| GGACACAAAGCCCTTTGGCA+AGG | - | chr5_1:7928366-7928385 | Msa0715060:intron | 55.0% | |
| CTACTGCAAGGGAACTGCTC+AGG | - | chr5_1:7928711-7928730 | Msa0715060:five_prime_UTR | 55.0% | |
| AAGTCGTCATCAACGACGCG+AGG | - | chr5_1:7928922-7928941 | Msa0715060:five_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 7927277 | 7928956 | 7927277 | ID=Msa0715060;Name=Msa0715060 |
| chr5_1 | mRNA | 7927277 | 7928956 | 7927277 | ID=Msa0715060-mRNA-1;Parent=Msa0715060;Name=Msa0715060-mRNA-1;_AED=0.09;_eAED=0.09;_QI=316|1|0.8|1|1|1|5|0|173 |
| chr5_1 | exon | 7927277 | 7927378 | 7927277 | ID=Msa0715060-mRNA-1:exon:3306;Parent=Msa0715060-mRNA-1 |
| chr5_1 | exon | 7927458 | 7927560 | 7927458 | ID=Msa0715060-mRNA-1:exon:3305;Parent=Msa0715060-mRNA-1 |
| chr5_1 | exon | 7927648 | 7927742 | 7927648 | ID=Msa0715060-mRNA-1:exon:3304;Parent=Msa0715060-mRNA-1 |
| chr5_1 | exon | 7927846 | 7927912 | 7927846 | ID=Msa0715060-mRNA-1:exon:3303;Parent=Msa0715060-mRNA-1 |
| chr5_1 | exon | 7928486 | 7928956 | 7928486 | ID=Msa0715060-mRNA-1:exon:3302;Parent=Msa0715060-mRNA-1 |
| chr5_1 | five_prime_UTR | 7928641 | 7928956 | 7928641 | ID=Msa0715060-mRNA-1:five_prime_utr;Parent=Msa0715060-mRNA-1 |
| chr5_1 | CDS | 7928486 | 7928640 | 7928486 | ID=Msa0715060-mRNA-1:cds;Parent=Msa0715060-mRNA-1 |
| chr5_1 | CDS | 7927846 | 7927912 | 7927846 | ID=Msa0715060-mRNA-1:cds;Parent=Msa0715060-mRNA-1 |
| chr5_1 | CDS | 7927648 | 7927742 | 7927648 | ID=Msa0715060-mRNA-1:cds;Parent=Msa0715060-mRNA-1 |
| chr5_1 | CDS | 7927458 | 7927560 | 7927458 | ID=Msa0715060-mRNA-1:cds;Parent=Msa0715060-mRNA-1 |
| chr5_1 | CDS | 7927277 | 7927378 | 7927277 | ID=Msa0715060-mRNA-1:cds;Parent=Msa0715060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
