Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819170 | XP_003616760.1 | 95.229 | 524 | 25 | 0 | 11 | 534 | 12 | 535 | 0.0 | 987 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819170 | sp|Q5XVC7|Y2048_ARATH | 40.977 | 532 | 232 | 15 | 21 | 534 | 49 | 516 | 2.02e-89 | 287 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819170 | G7KH30 | 95.229 | 524 | 25 | 0 | 11 | 534 | 12 | 535 | 0.0 | 987 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000050 | Msa0819170 | 0.838491 | 2.785769e-57 | -8.615850e-47 |
Msa0002580 | Msa0819170 | 0.831161 | 1.953161e-55 | -8.615850e-47 |
Msa0003080 | Msa0819170 | 0.816657 | 4.938742e-52 | -8.615850e-47 |
Msa0005890 | Msa0819170 | 0.831996 | 1.215726e-55 | -8.615850e-47 |
Msa0008040 | Msa0819170 | 0.808612 | 2.843521e-50 | -8.615850e-47 |
Msa0025160 | Msa0819170 | 0.822560 | 2.219519e-53 | -8.615850e-47 |
Msa0025580 | Msa0819170 | 0.812466 | 4.180200e-51 | -8.615850e-47 |
Msa0027280 | Msa0819170 | 0.830973 | 2.172314e-55 | -8.615850e-47 |
Msa0027820 | Msa0819170 | 0.830119 | 3.514493e-55 | -8.615850e-47 |
Msa0034210 | Msa0819170 | 0.864979 | 8.229405e-65 | -8.615850e-47 |
Msa0036870 | Msa0819170 | 0.813011 | 3.176116e-51 | -8.615850e-47 |
Msa0042640 | Msa0819170 | 0.822837 | 1.912925e-53 | -8.615850e-47 |
Msa0048510 | Msa0819170 | 0.846865 | 1.660518e-59 | -8.615850e-47 |
Msa0049760 | Msa0819170 | 0.802897 | 4.511090e-49 | -8.615850e-47 |
Msa0050660 | Msa0819170 | 0.828802 | 7.343049e-55 | -8.615850e-47 |
Msa0050700 | Msa0819170 | 0.831505 | 1.607446e-55 | -8.615850e-47 |
Msa0050790 | Msa0819170 | 0.839836 | 1.248678e-57 | -8.615850e-47 |
Msa0054690 | Msa0819170 | 0.833956 | 3.959718e-56 | -8.615850e-47 |
Msa0067330 | Msa0819170 | 0.855287 | 6.978768e-62 | -8.615850e-47 |
Msa0071850 | Msa0819170 | 0.824025 | 1.009212e-53 | -8.615850e-47 |
Msa0071860 | Msa0819170 | 0.840342 | 9.212870e-58 | -8.615850e-47 |
Msa0071880 | Msa0819170 | 0.821977 | 3.030893e-53 | -8.615850e-47 |
Msa0073120 | Msa0819170 | 0.808535 | 2.952673e-50 | -8.615850e-47 |
Msa0077340 | Msa0819170 | 0.824697 | 7.014160e-54 | -8.615850e-47 |
Msa0077560 | Msa0819170 | 0.811338 | 7.361399e-51 | -8.615850e-47 |
Msa0081390 | Msa0819170 | 0.803567 | 3.277723e-49 | -8.615850e-47 |
Msa0081450 | Msa0819170 | 0.803794 | 2.940465e-49 | -8.615850e-47 |
Msa0081520 | Msa0819170 | 0.812356 | 4.418178e-51 | -8.615850e-47 |
Msa0090400 | Msa0819170 | 0.825372 | 4.858372e-54 | -8.615850e-47 |
Msa0094780 | Msa0819170 | 0.853161 | 2.869667e-61 | -8.615850e-47 |
Msa0098040 | Msa0819170 | 0.806825 | 6.814790e-50 | -8.615850e-47 |
Msa0108880 | Msa0819170 | 0.840803 | 6.976698e-58 | -8.615850e-47 |
Msa0116680 | Msa0819170 | 0.832832 | 7.547972e-56 | -8.615850e-47 |
Msa0605560 | Msa0819170 | 0.845577 | 3.723992e-59 | -8.615850e-47 |
Msa0611210 | Msa0819170 | 0.860665 | 1.762998e-63 | -8.615850e-47 |
Msa0616210 | Msa0819170 | 0.822643 | 2.122710e-53 | -8.615850e-47 |
Msa0621710 | Msa0819170 | 0.809541 | 1.798215e-50 | -8.615850e-47 |
Msa0624900 | Msa0819170 | 0.803774 | 2.968862e-49 | -8.615850e-47 |
Msa0626450 | Msa0819170 | 0.855789 | 4.983518e-62 | -8.615850e-47 |
Msa0626490 | Msa0819170 | 0.853259 | 2.688928e-61 | -8.615850e-47 |
Msa0640200 | Msa0819170 | 0.823694 | 1.206946e-53 | -8.615850e-47 |
Msa0644410 | Msa0819170 | 0.829495 | 4.985928e-55 | -8.615850e-47 |
Msa0646510 | Msa0819170 | 0.842023 | 3.329789e-58 | -8.615850e-47 |
Msa0651550 | Msa0819170 | 0.868708 | 5.339914e-66 | -8.615850e-47 |
Msa0652000 | Msa0819170 | 0.800576 | 1.350539e-48 | -8.615850e-47 |
Msa0652170 | Msa0819170 | 0.826415 | 2.747810e-54 | -8.615850e-47 |
Msa0652770 | Msa0819170 | 0.823961 | 1.044717e-53 | -8.615850e-47 |
Msa0657440 | Msa0819170 | 0.815401 | 9.419889e-52 | -8.615850e-47 |
Msa0658640 | Msa0819170 | 0.821955 | 3.065510e-53 | -8.615850e-47 |
Msa0661150 | Msa0819170 | 0.831622 | 1.503657e-55 | -8.615850e-47 |
Msa0662110 | Msa0819170 | 0.803578 | 3.261376e-49 | -8.615850e-47 |
Msa0664600 | Msa0819170 | 0.852050 | 5.953976e-61 | -8.615850e-47 |
Msa0666700 | Msa0819170 | 0.832034 | 1.190287e-55 | -8.615850e-47 |
Msa0674480 | Msa0819170 | 0.815144 | 1.074585e-51 | -8.615850e-47 |
Msa0675330 | Msa0819170 | 0.859476 | 4.028334e-63 | -8.615850e-47 |
Msa0678490 | Msa0819170 | 0.819139 | 1.358902e-52 | -8.615850e-47 |
Msa0693890 | Msa0819170 | 0.849157 | 3.871764e-60 | -8.615850e-47 |
Msa0694720 | Msa0819170 | 0.831136 | 1.980958e-55 | -8.615850e-47 |
Msa0699540 | Msa0819170 | 0.822249 | 2.620078e-53 | -8.615850e-47 |
Msa0700460 | Msa0819170 | 0.828782 | 7.424782e-55 | -8.615850e-47 |
Msa0701700 | Msa0819170 | 0.813160 | 2.945757e-51 | -8.615850e-47 |
Msa0703600 | Msa0819170 | 0.807566 | 4.748678e-50 | -8.615850e-47 |
Msa0709200 | Msa0819170 | 0.807843 | 4.146282e-50 | -8.615850e-47 |
Msa0709440 | Msa0819170 | 0.807149 | 5.819769e-50 | -8.615850e-47 |
Msa0711400 | Msa0819170 | 0.826521 | 2.591388e-54 | -8.615850e-47 |
Msa0713700 | Msa0819170 | 0.809407 | 1.921339e-50 | -8.615850e-47 |
Msa0721080 | Msa0819170 | 0.819500 | 1.124406e-52 | -8.615850e-47 |
Msa0724800 | Msa0819170 | 0.802579 | 5.247875e-49 | -8.615850e-47 |
Msa0725750 | Msa0819170 | 0.816490 | 5.382706e-52 | -8.615850e-47 |
Msa0725770 | Msa0819170 | 0.821596 | 3.713063e-53 | -8.615850e-47 |
Msa0727640 | Msa0819170 | 0.807846 | 4.140488e-50 | -8.615850e-47 |
Msa0735780 | Msa0819170 | 0.833029 | 6.742895e-56 | -8.615850e-47 |
Msa0738700 | Msa0819170 | 0.894037 | 3.593064e-75 | -8.615850e-47 |
Msa0740710 | Msa0819170 | 0.808796 | 2.597691e-50 | -8.615850e-47 |
Msa0741220 | Msa0819170 | 0.845312 | 4.393560e-59 | -8.615850e-47 |
Msa0742740 | Msa0819170 | 0.805930 | 1.052456e-49 | -8.615850e-47 |
Msa0756490 | Msa0819170 | 0.800490 | 1.406220e-48 | -8.615850e-47 |
Msa0761670 | Msa0819170 | 0.805134 | 1.545712e-49 | -8.615850e-47 |
Msa0766350 | Msa0819170 | 0.803789 | 2.948407e-49 | -8.615850e-47 |
Msa0768990 | Msa0819170 | 0.847093 | 1.438244e-59 | -8.615850e-47 |
Msa0773630 | Msa0819170 | 0.819428 | 1.167246e-52 | -8.615850e-47 |
Msa0780910 | Msa0819170 | 0.818651 | 1.754026e-52 | -8.615850e-47 |
Msa0783530 | Msa0819170 | 0.858952 | 5.784688e-63 | -8.615850e-47 |
Msa0792370 | Msa0819170 | 0.814176 | 1.760411e-51 | -8.615850e-47 |
Msa0795870 | Msa0819170 | 0.855885 | 4.672232e-62 | -8.615850e-47 |
Msa0815920 | Msa0819170 | 0.811544 | 6.639968e-51 | -8.615850e-47 |
Msa0819170 | Msa0823820 | 0.801831 | 7.478283e-49 | -8.615850e-47 |
Msa0819170 | Msa0824450 | 0.836722 | 7.920200e-57 | -8.615850e-47 |
Msa0819170 | Msa0829300 | 0.819736 | 9.930044e-53 | -8.615850e-47 |
Msa0819170 | Msa0829330 | 0.817557 | 3.100912e-52 | -8.615850e-47 |
Msa0819170 | Msa0833650 | 0.861166 | 1.241357e-63 | -8.615850e-47 |
Msa0819170 | Msa0835490 | 0.820006 | 8.613749e-53 | -8.615850e-47 |
Msa0819170 | Msa0842070 | 0.809536 | 1.802664e-50 | -8.615850e-47 |
Msa0819170 | Msa0855830 | 0.811942 | 5.439230e-51 | -8.615850e-47 |
Msa0819170 | Msa0859290 | 0.909190 | 7.487562e-82 | -8.615850e-47 |
Msa0819170 | Msa0861850 | 0.825914 | 3.615036e-54 | -8.615850e-47 |
Msa0819170 | Msa0863010 | 0.802524 | 5.385632e-49 | -8.615850e-47 |
Msa0819170 | Msa0876940 | 0.811078 | 8.379814e-51 | -8.615850e-47 |
Msa0819170 | Msa0880270 | 0.802401 | 5.709183e-49 | -8.615850e-47 |
Msa0819170 | Msa0894790 | 0.813160 | 2.946380e-51 | -8.615850e-47 |
Msa0819170 | Msa0921590 | 0.817387 | 3.386476e-52 | -8.615850e-47 |
Msa0819170 | Msa0945190 | 0.828629 | 8.082530e-55 | -8.615850e-47 |
Msa0819170 | Msa0967870 | 0.806361 | 8.537601e-50 | -8.615850e-47 |
Msa0819170 | Msa0981320 | 0.826699 | 2.351127e-54 | -8.615850e-47 |
Msa0819170 | Msa0997920 | 0.811416 | 7.079276e-51 | -8.615850e-47 |
Msa0819170 | Msa1009950 | 0.841166 | 5.602518e-58 | -8.615850e-47 |
Msa0819170 | Msa1020480 | 0.818175 | 2.248166e-52 | -8.615850e-47 |
Msa0819170 | Msa1020670 | 0.800235 | 1.585334e-48 | -8.615850e-47 |
Msa0819170 | Msa1021590 | 0.814029 | 1.897093e-51 | -8.615850e-47 |
Msa0819170 | Msa1042160 | 0.866653 | 2.435469e-65 | -8.615850e-47 |
Msa0819170 | Msa1042190 | 0.870078 | 1.914602e-66 | -8.615850e-47 |
Msa0819170 | Msa1044680 | 0.826982 | 2.011246e-54 | -8.615850e-47 |
Msa0819170 | Msa1045140 | 0.805322 | 1.411494e-49 | -8.615850e-47 |
Msa0819170 | Msa1051420 | 0.821491 | 3.924477e-53 | -8.615850e-47 |
Msa0819170 | Msa1064370 | 0.800513 | 1.391555e-48 | -8.615850e-47 |
Msa0819170 | Msa1072940 | 0.850886 | 1.270762e-60 | -8.615850e-47 |
Msa0819170 | Msa1080000 | 0.853041 | 3.105787e-61 | -8.615850e-47 |
Msa0819170 | Msa1081390 | 0.811043 | 8.528132e-51 | -8.615850e-47 |
Msa0819170 | Msa1081690 | 0.832037 | 1.187971e-55 | -8.615850e-47 |
Msa0819170 | Msa1084530 | 0.802959 | 4.379533e-49 | -8.615850e-47 |
Msa0819170 | Msa1096960 | 0.823193 | 1.579875e-53 | -8.615850e-47 |
Msa0819170 | Msa1105640 | 0.824594 | 7.416874e-54 | -8.615850e-47 |
Msa0819170 | Msa1105780 | 0.802381 | 5.763842e-49 | -8.615850e-47 |
Msa0819170 | Msa1116220 | 0.811427 | 7.039157e-51 | -8.615850e-47 |
Msa0819170 | Msa1117920 | 0.817405 | 3.355349e-52 | -8.615850e-47 |
Msa0819170 | Msa1123210 | 0.819677 | 1.024403e-52 | -8.615850e-47 |
Msa0819170 | Msa1125820 | 0.803748 | 3.006600e-49 | -8.615850e-47 |
Msa0819170 | Msa1125990 | 0.806350 | 8.583903e-50 | -8.615850e-47 |
Msa0819170 | Msa1132840 | 0.859708 | 3.431770e-63 | -8.615850e-47 |
Msa0819170 | Msa1140220 | 0.820006 | 8.613634e-53 | -8.615850e-47 |
Msa0819170 | Msa1148960 | 0.812619 | 3.870317e-51 | -8.615850e-47 |
Msa0819170 | Msa1155170 | -0.824224 | 9.064661e-54 | -8.615850e-47 |
Msa0819170 | Msa1160920 | 0.854608 | 1.098943e-61 | -8.615850e-47 |
Msa0819170 | Msa1161680 | 0.827715 | 1.342123e-54 | -8.615850e-47 |
Msa0819170 | Msa1167470 | 0.862239 | 5.835877e-64 | -8.615850e-47 |
Msa0819170 | Msa1171290 | 0.803762 | 2.985829e-49 | -8.615850e-47 |
Msa0819170 | Msa1186020 | 0.828000 | 1.146527e-54 | -8.615850e-47 |
Msa0819170 | Msa1192570 | 0.821933 | 3.101554e-53 | -8.615850e-47 |
Msa0819170 | Msa1200890 | 0.828444 | 8.961483e-55 | -8.615850e-47 |
Msa0819170 | Msa1208950 | 0.840369 | 9.064767e-58 | -8.615850e-47 |
Msa0819170 | Msa1215870 | 0.820707 | 5.948515e-53 | -8.615850e-47 |
Msa0819170 | Msa1223570 | 0.821436 | 4.041085e-53 | -8.615850e-47 |
Msa0819170 | Msa1226520 | 0.822605 | 2.166175e-53 | -8.615850e-47 |
Msa0819170 | Msa1240260 | 0.800162 | 1.640449e-48 | -8.615850e-47 |
Msa0819170 | Msa1240770 | 0.827637 | 1.401152e-54 | -8.615850e-47 |
Msa0819170 | Msa1263490 | 0.819799 | 9.606288e-53 | -8.615850e-47 |
Msa0819170 | Msa1263780 | 0.808628 | 2.821558e-50 | -8.615850e-47 |
Msa0819170 | Msa1265650 | 0.830648 | 2.608844e-55 | -8.615850e-47 |
Msa0819170 | Msa1277150 | 0.817909 | 2.582639e-52 | -8.615850e-47 |
Msa0819170 | Msa1282260 | 0.805780 | 1.131718e-49 | -8.615850e-47 |
Msa0819170 | Msa1297230 | 0.822441 | 2.364705e-53 | -8.615850e-47 |
Msa0819170 | Msa1303560 | 0.819364 | 1.207315e-52 | -8.615850e-47 |
Msa0819170 | Msa1303650 | 0.819956 | 8.843931e-53 | -8.615850e-47 |
Msa0819170 | Msa1307630 | 0.817048 | 4.035487e-52 | -8.615850e-47 |
Msa0819170 | Msa1315160 | 0.800615 | 1.326244e-48 | -8.615850e-47 |
Msa0819170 | Msa1316330 | 0.812631 | 3.846311e-51 | -8.615850e-47 |
Msa0819170 | Msa1343180 | 0.834354 | 3.146792e-56 | -8.615850e-47 |
Msa0819170 | Msa1346560 | 0.822653 | 2.111391e-53 | -8.615850e-47 |
Msa0819170 | Msa1347310 | 0.807193 | 5.695361e-50 | -8.615850e-47 |
Msa0819170 | Msa1348090 | 0.808286 | 3.336988e-50 | -8.615850e-47 |
Msa0819170 | Msa1356830 | 0.806912 | 6.531337e-50 | -8.615850e-47 |
Msa0819170 | Msa1359690 | 0.827248 | 1.737192e-54 | -8.615850e-47 |
Msa0819170 | Msa1371910 | 0.812643 | 3.823645e-51 | -8.615850e-47 |
Msa0819170 | Msa1372040 | 0.823910 | 1.073893e-53 | -8.615850e-47 |
Msa0819170 | Msa1380120 | 0.817213 | 3.705317e-52 | -8.615850e-47 |
Msa0819170 | Msa1384150 | 0.814565 | 1.444177e-51 | -8.615850e-47 |
Msa0819170 | Msa1384460 | 0.832521 | 9.014705e-56 | -8.615850e-47 |
Msa0819170 | Msa1387620 | 0.822536 | 2.247754e-53 | -8.615850e-47 |
Msa0819170 | Msa1392580 | 0.810256 | 1.261791e-50 | -8.615850e-47 |
Msa0819170 | Msa1393780 | 0.835674 | 1.462754e-56 | -8.615850e-47 |
Msa0819170 | Msa1396030 | 0.825487 | 4.563950e-54 | -8.615850e-47 |
Msa0819170 | Msa1397400 | 0.846475 | 2.121987e-59 | -8.615850e-47 |
Msa0819170 | Msa1405460 | 0.839756 | 1.310168e-57 | -8.615850e-47 |
Msa0819170 | Msa1409410 | 0.849880 | 2.433295e-60 | -8.615850e-47 |
Msa0819170 | Msa1412000 | 0.818633 | 1.770030e-52 | -8.615850e-47 |
Msa0819170 | Msa1415540 | 0.886764 | 2.573766e-72 | -8.615850e-47 |
Msa0819170 | Msa1417380 | 0.805750 | 1.148350e-49 | -8.615850e-47 |
Msa0819170 | Msa1420950 | 0.832685 | 8.208895e-56 | -8.615850e-47 |
Msa0819170 | Msa1427100 | 0.800731 | 1.255740e-48 | -8.615850e-47 |
Msa0819170 | Msa1427110 | 0.802078 | 6.653732e-49 | -8.615850e-47 |
Msa0819170 | Msa1432500 | 0.834801 | 2.429416e-56 | -8.615850e-47 |
Msa0819170 | Msa1433790 | 0.816516 | 5.311337e-52 | -8.615850e-47 |
Msa0819170 | Msa1433810 | 0.812765 | 3.596445e-51 | -8.615850e-47 |
Msa0819170 | Msa1434220 | 0.819822 | 9.492529e-53 | -8.615850e-47 |
Msa0819170 | Msa1437930 | 0.829321 | 5.494908e-55 | -8.615850e-47 |
Msa0819170 | Msa1440630 | 0.836850 | 7.348329e-57 | -8.615850e-47 |
Msa0819170 | Msa1440960 | 0.852722 | 3.832090e-61 | -8.615850e-47 |
Msa0819170 | Msa1449480 | 0.814133 | 1.799146e-51 | -8.615850e-47 |
Msa0819170 | Msa1452140 | 0.860069 | 2.670877e-63 | -8.615850e-47 |
Msa0819170 | Msa1454140 | 0.812755 | 3.614488e-51 | -8.615850e-47 |
Msa0121330 | Msa0819170 | 0.819221 | 1.301702e-52 | -8.615850e-47 |
Msa0122330 | Msa0819170 | 0.805651 | 1.204408e-49 | -8.615850e-47 |
Msa0123070 | Msa0819170 | 0.840956 | 6.361585e-58 | -8.615850e-47 |
Msa0123340 | Msa0819170 | 0.838516 | 2.745935e-57 | -8.615850e-47 |
Msa0125210 | Msa0819170 | 0.820980 | 5.147640e-53 | -8.615850e-47 |
Msa0125360 | Msa0819170 | 0.817527 | 3.148925e-52 | -8.615850e-47 |
Msa0128310 | Msa0819170 | 0.877750 | 4.890997e-69 | -8.615850e-47 |
Msa0136650 | Msa0819170 | 0.858633 | 7.205735e-63 | -8.615850e-47 |
Msa0137880 | Msa0819170 | 0.803482 | 3.413973e-49 | -8.615850e-47 |
Msa0140280 | Msa0819170 | 0.814025 | 1.900753e-51 | -8.615850e-47 |
Msa0146650 | Msa0819170 | 0.829932 | 3.903972e-55 | -8.615850e-47 |
Msa0149350 | Msa0819170 | 0.844267 | 8.401929e-59 | -8.615850e-47 |
Msa0158860 | Msa0819170 | 0.838601 | 2.610349e-57 | -8.615850e-47 |
Msa0168070 | Msa0819170 | 0.825964 | 3.517843e-54 | -8.615850e-47 |
Msa0173540 | Msa0819170 | 0.821595 | 3.714314e-53 | -8.615850e-47 |
Msa0174440 | Msa0819170 | 0.868282 | 7.331940e-66 | -8.615850e-47 |
Msa0174450 | Msa0819170 | 0.886437 | 3.421826e-72 | -8.615850e-47 |
Msa0178560 | Msa0819170 | 0.803652 | 3.146981e-49 | -8.615850e-47 |
Msa0182190 | Msa0819170 | 0.800338 | 1.510285e-48 | -8.615850e-47 |
Msa0188610 | Msa0819170 | 0.830097 | 3.557028e-55 | -8.615850e-47 |
Msa0189900 | Msa0819170 | 0.800315 | 1.526619e-48 | -8.615850e-47 |
Msa0190570 | Msa0819170 | 0.821732 | 3.453719e-53 | -8.615850e-47 |
Msa0200050 | Msa0819170 | 0.839651 | 1.395081e-57 | -8.615850e-47 |
Msa0211030 | Msa0819170 | 0.813087 | 3.056746e-51 | -8.615850e-47 |
Msa0213030 | Msa0819170 | 0.818530 | 1.868421e-52 | -8.615850e-47 |
Msa0222560 | Msa0819170 | 0.814608 | 1.412754e-51 | -8.615850e-47 |
Msa0225100 | Msa0819170 | 0.830295 | 3.182517e-55 | -8.615850e-47 |
Msa0225860 | Msa0819170 | 0.849206 | 3.753107e-60 | -8.615850e-47 |
Msa0230800 | Msa0819170 | 0.813915 | 2.009892e-51 | -8.615850e-47 |
Msa0230870 | Msa0819170 | 0.801080 | 1.066082e-48 | -8.615850e-47 |
Msa0364120 | Msa0819170 | 0.822534 | 2.250534e-53 | -8.615850e-47 |
Msa0369790 | Msa0819170 | 0.891734 | 3.029220e-74 | -8.615850e-47 |
Msa0378720 | Msa0819170 | 0.818252 | 2.159842e-52 | -8.615850e-47 |
Msa0380620 | Msa0819170 | 0.852760 | 3.736511e-61 | -8.615850e-47 |
Msa0380670 | Msa0819170 | 0.801854 | 7.396379e-49 | -8.615850e-47 |
Msa0390970 | Msa0819170 | 0.823807 | 1.135070e-53 | -8.615850e-47 |
Msa0405680 | Msa0819170 | 0.838752 | 2.385937e-57 | -8.615850e-47 |
Msa0415610 | Msa0819170 | 0.822859 | 1.891000e-53 | -8.615850e-47 |
Msa0418970 | Msa0819170 | 0.812397 | 4.328291e-51 | -8.615850e-47 |
Msa0424160 | Msa0819170 | 0.806169 | 9.373029e-50 | -8.615850e-47 |
Msa0426530 | Msa0819170 | 0.812132 | 4.944606e-51 | -8.615850e-47 |
Msa0428370 | Msa0819170 | 0.825617 | 4.251195e-54 | -8.615850e-47 |
Msa0430260 | Msa0819170 | 0.863685 | 2.086147e-64 | -8.615850e-47 |
Msa0435210 | Msa0819170 | 0.845528 | 3.839588e-59 | -8.615850e-47 |
Msa0436330 | Msa0819170 | 0.822938 | 1.812388e-53 | -8.615850e-47 |
Msa0436910 | Msa0819170 | 0.830171 | 3.412656e-55 | -8.615850e-47 |
Msa0457560 | Msa0819170 | 0.809977 | 1.448883e-50 | -8.615850e-47 |
Msa0460630 | Msa0819170 | 0.804827 | 1.791791e-49 | -8.615850e-47 |
Msa0464000 | Msa0819170 | 0.888506 | 5.556239e-73 | -8.615850e-47 |
Msa0472950 | Msa0819170 | 0.833725 | 4.521238e-56 | -8.615850e-47 |
Msa0474730 | Msa0819170 | 0.839754 | 1.311057e-57 | -8.615850e-47 |
Msa0479320 | Msa0819170 | 0.845308 | 4.403515e-59 | -8.615850e-47 |
Msa0481890 | Msa0819170 | 0.804077 | 2.568275e-49 | -8.615850e-47 |
Msa0242590 | Msa0819170 | 0.815546 | 8.746292e-52 | -8.615850e-47 |
Msa0244640 | Msa0819170 | 0.843632 | 1.243465e-58 | -8.615850e-47 |
Msa0251710 | Msa0819170 | 0.802284 | 6.035262e-49 | -8.615850e-47 |
Msa0260510 | Msa0819170 | 0.838544 | 2.699566e-57 | -8.615850e-47 |
Msa0266180 | Msa0819170 | 0.830506 | 2.826735e-55 | -8.615850e-47 |
Msa0267110 | Msa0819170 | 0.813963 | 1.961902e-51 | -8.615850e-47 |
Msa0270340 | Msa0819170 | 0.840840 | 6.822989e-58 | -8.615850e-47 |
Msa0275770 | Msa0819170 | 0.814637 | 1.392189e-51 | -8.615850e-47 |
Msa0275820 | Msa0819170 | 0.827431 | 1.570287e-54 | -8.615850e-47 |
Msa0280790 | Msa0819170 | 0.803875 | 2.829512e-49 | -8.615850e-47 |
Msa0283330 | Msa0819170 | 0.815432 | 9.274135e-52 | -8.615850e-47 |
Msa0287740 | Msa0819170 | 0.825632 | 4.217564e-54 | -8.615850e-47 |
Msa0290720 | Msa0819170 | 0.808877 | 2.495830e-50 | -8.615850e-47 |
Msa0298470 | Msa0819170 | 0.843475 | 1.369619e-58 | -8.615850e-47 |
Msa0307270 | Msa0819170 | 0.841661 | 4.150065e-58 | -8.615850e-47 |
Msa0307670 | Msa0819170 | 0.812531 | 4.046085e-51 | -8.615850e-47 |
Msa0321620 | Msa0819170 | 0.834580 | 2.760643e-56 | -8.615850e-47 |
Msa0330380 | Msa0819170 | 0.816698 | 4.835889e-52 | -8.615850e-47 |
Msa0340500 | Msa0819170 | 0.844823 | 5.956272e-59 | -8.615850e-47 |
Msa0483100 | Msa0819170 | 0.806826 | 6.812151e-50 | -8.615850e-47 |
Msa0500380 | Msa0819170 | 0.852146 | 5.590158e-61 | -8.615850e-47 |
Msa0509550 | Msa0819170 | 0.892329 | 1.754374e-74 | -8.615850e-47 |
Msa0513970 | Msa0819170 | 0.809718 | 1.647289e-50 | -8.615850e-47 |
Msa0517250 | Msa0819170 | 0.837641 | 4.610816e-57 | -8.615850e-47 |
Msa0519750 | Msa0819170 | 0.808536 | 2.951956e-50 | -8.615850e-47 |
Msa0519760 | Msa0819170 | 0.820915 | 5.329290e-53 | -8.615850e-47 |
Msa0519810 | Msa0819170 | 0.804423 | 2.175556e-49 | -8.615850e-47 |
Msa0519820 | Msa0819170 | 0.832306 | 1.019062e-55 | -8.615850e-47 |
Msa0519830 | Msa0819170 | 0.827084 | 1.901723e-54 | -8.615850e-47 |
Msa0519840 | Msa0819170 | 0.816434 | 5.540449e-52 | -8.615850e-47 |
Msa0528570 | Msa0819170 | 0.898490 | 5.041501e-77 | -8.615850e-47 |
Msa0529030 | Msa0819170 | 0.845258 | 4.543357e-59 | -8.615850e-47 |
Msa0530780 | Msa0819170 | 0.838533 | 2.717923e-57 | -8.615850e-47 |
Msa0531960 | Msa0819170 | 0.811932 | 5.465470e-51 | -8.615850e-47 |
Msa0541300 | Msa0819170 | 0.844742 | 6.261518e-59 | -8.615850e-47 |
Msa0541310 | Msa0819170 | 0.840814 | 6.932826e-58 | -8.615850e-47 |
Msa0543660 | Msa0819170 | 0.813801 | 2.129958e-51 | -8.615850e-47 |
Msa0548470 | Msa0819170 | 0.832516 | 9.038873e-56 | -8.615850e-47 |
Msa0549370 | Msa0819170 | 0.812896 | 3.366310e-51 | -8.615850e-47 |
Msa0550050 | Msa0819170 | 0.844605 | 6.817539e-59 | -8.615850e-47 |
Msa0557370 | Msa0819170 | 0.811902 | 5.549626e-51 | -8.615850e-47 |
Msa0557460 | Msa0819170 | 0.873553 | 1.344479e-67 | -8.615850e-47 |
Msa0567170 | Msa0819170 | 0.814838 | 1.256168e-51 | -8.615850e-47 |
Msa0580370 | Msa0819170 | 0.860271 | 2.320625e-63 | -8.615850e-47 |
Msa0580810 | Msa0819170 | 0.801801 | 7.585909e-49 | -8.615850e-47 |
Msa0584420 | Msa0819170 | 0.822474 | 2.323854e-53 | -8.615850e-47 |
Msa0585020 | Msa0819170 | 0.855849 | 4.786903e-62 | -8.615850e-47 |
Msa0587620 | Msa0819170 | 0.808663 | 2.772448e-50 | -8.615850e-47 |
Msa0588920 | Msa0819170 | 0.820805 | 5.647736e-53 | -8.615850e-47 |
Msa0597270 | Msa0819170 | 0.865040 | 7.877605e-65 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819170 | MtrunA17_Chr5g0438111 | 95.229 | 524 | 25 | 0 | 11 | 534 | 12 | 535 | 0.0 | 987 |
Msa0819170 | MtrunA17_Chr3g0114551 | 52.881 | 590 | 195 | 13 | 17 | 528 | 12 | 596 | 1.54e-170 | 495 |
Msa0819170 | MtrunA17_Chr7g0244501 | 36.082 | 582 | 297 | 14 | 1 | 530 | 1 | 559 | 1.18e-84 | 273 |
Msa0819170 | MtrunA17_Chr4g0013151 | 37.848 | 539 | 282 | 14 | 19 | 523 | 83 | 602 | 1.03e-70 | 238 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819170 | AT2G40480.1 | 40.977 | 532 | 232 | 15 | 21 | 534 | 49 | 516 | 2.06e-90 | 287 |
Msa0819170 | AT3G56270.1 | 36.404 | 456 | 200 | 17 | 23 | 460 | 37 | 420 | 7.25e-48 | 172 |
Msa0819170 | AT2G38370.1 | 31.801 | 522 | 289 | 11 | 30 | 526 | 25 | 504 | 3.20e-43 | 161 |
Msa0819170 | AT2G38370.2 | 31.801 | 522 | 289 | 11 | 30 | 526 | 42 | 521 | 8.03e-43 | 160 |
Msa0819170 | AT3G51720.1 | 36.934 | 287 | 111 | 7 | 29 | 313 | 11 | 229 | 7.19e-19 | 89.4 |
Find 95 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTTACCTTATAGTTTA+AGG | 0.068954 | 5_3:+55303346 | Msa0819170:three_prime_UTR |
TACCTTATAGTTTAAGGTAT+TGG | 0.250772 | 5_3:+55303352 | Msa0819170:three_prime_UTR |
ACCTTATAGTTTAAGGTATT+GGG | 0.251438 | 5_3:+55303353 | Msa0819170:three_prime_UTR |
CTCTTCAGGTATTTGAAATT+CGG | 0.271157 | 5_3:-55302528 | None:intergenic |
CTTCTTCTTCTGATGTGATA+TGG | 0.272323 | 5_3:-55303029 | None:intergenic |
AAAGAAGAAGAGATGGAAAA+TGG | 0.276556 | 5_3:+55300415 | Msa0819170:CDS |
TTTGCTGCGTAGAACTTCTT+TGG | 0.279623 | 5_3:-55302642 | None:intergenic |
AAAGAAGCTGTTACTCGTTT+TGG | 0.282290 | 5_3:+55300496 | Msa0819170:CDS |
CCTAACAAAGCACTCTCTAT+TGG | 0.297613 | 5_3:+55303252 | Msa0819170:three_prime_UTR |
TCCCAATACCTTAAACTATA+AGG | 0.299821 | 5_3:-55303354 | None:intergenic |
TGGGAATTCAAGTGCAAGTT+TGG | 0.309034 | 5_3:+55303272 | Msa0819170:three_prime_UTR |
TCTTCAGGTATTTGAAATTC+GGG | 0.319312 | 5_3:-55302527 | None:intergenic |
ACTTGATGTGCTTGAAGAAC+TGG | 0.339651 | 5_3:+55301779 | Msa0819170:CDS |
CCAATAGAGAGTGCTTTGTT+AGG | 0.354929 | 5_3:-55303252 | None:intergenic |
TTCCTAAGGGGAATGATATT+CGG | 0.360853 | 5_3:-55303063 | None:intergenic |
ACATATCGGGCGATGAAGTA+TGG | 0.361701 | 5_3:-55301962 | None:intergenic |
GATATCTCGCCATTCGCTAT+TGG | 0.370039 | 5_3:+55303145 | Msa0819170:three_prime_UTR |
TCAAGTGCAAGTTTGGAGTT+TGG | 0.371609 | 5_3:+55303279 | Msa0819170:three_prime_UTR |
TCACATCAGAAGAAGAAGTT+TGG | 0.372747 | 5_3:+55303034 | Msa0819170:CDS |
CTAACAAAGCACTCTCTATT+GGG | 0.374852 | 5_3:+55303253 | Msa0819170:three_prime_UTR |
ATCATCAACTTCTTCTCCAT+TGG | 0.377982 | 5_3:-55300373 | None:intergenic |
TAATTTCTCGAGAATCGTTT+TGG | 0.386491 | 5_3:-55301808 | None:intergenic |
TTTATCATTTCGCTTTCCTA+AGG | 0.403073 | 5_3:-55303077 | None:intergenic |
CGAGCTGTGGCATAAGCATT+AGG | 0.405910 | 5_3:-55303116 | None:intergenic |
GTGCTGCTGAAGAGGCTCTA+AGG | 0.408138 | 5_3:+55302717 | Msa0819170:CDS |
TAACTCGGTTAGCAACATAT+CGG | 0.412438 | 5_3:-55301976 | None:intergenic |
GATGATGATGGAATATTCAT+TGG | 0.415888 | 5_3:+55300390 | Msa0819170:CDS |
ACTCAATCGTGCGAAAATCT+TGG | 0.420277 | 5_3:+55301870 | Msa0819170:CDS |
GATGTGATATGGACTGCTTT+TGG | 0.421669 | 5_3:-55303018 | None:intergenic |
TTCTTCAAGATAGACTCTTC+AGG | 0.424981 | 5_3:-55302542 | None:intergenic |
TTTCATGAAGATAATATAAG+AGG | 0.432477 | 5_3:+55303318 | Msa0819170:three_prime_UTR |
TGGTTACCTCTTTACAAACT+TGG | 0.449781 | 5_3:+55300532 | Msa0819170:CDS |
ACCAGAAGCTCCTGTAGAAA+AGG | 0.464298 | 5_3:+55302187 | Msa0819170:CDS |
AGAGGAACAAGCAGCAAAGT+TGG | 0.467968 | 5_3:+55301725 | Msa0819170:CDS |
AACTCGGTTAGCAACATATC+GGG | 0.470317 | 5_3:-55301975 | None:intergenic |
GCTTCACCAAGTTTGTAAAG+AGG | 0.476692 | 5_3:-55300538 | None:intergenic |
AAAGCAACGTGCTGCTGAAG+AGG | 0.489875 | 5_3:+55302709 | Msa0819170:CDS |
CGTTGCTCTAGCTGAAATCA+AGG | 0.490440 | 5_3:+55302412 | Msa0819170:CDS |
GGTAAAACTATAAACGATCT+CGG | 0.493887 | 5_3:+55302020 | Msa0819170:CDS |
GGAAGAGCACGCTGAAACAA+AGG | 0.495443 | 5_3:+55302919 | Msa0819170:CDS |
TTCAGCTAGAGCAACGGCTT+CGG | 0.499012 | 5_3:-55302405 | None:intergenic |
GCTTCTTTAACAGACTCAAA+TGG | 0.500848 | 5_3:-55300481 | None:intergenic |
GATTCCTGAAAACTATCTAA+AGG | 0.506443 | 5_3:+55302745 | Msa0819170:CDS |
TTATCATTTCGCTTTCCTAA+GGG | 0.506744 | 5_3:-55303076 | None:intergenic |
TGTATGTTAGTTTGAAACAT+GGG | 0.508604 | 5_3:+55303490 | Msa0819170:three_prime_UTR |
TTTGTCGTAGTATATTCGTC+AGG | 0.509274 | 5_3:-55302890 | None:intergenic |
AGATCTACTCAGCAGGAAGC+AGG | 0.509837 | 5_3:+55302865 | Msa0819170:CDS |
GTGGATGTTGAACAGTTCAA+TGG | 0.511134 | 5_3:+55302254 | Msa0819170:CDS |
CTGCAGAAGTTTCGAAGCAA+GGG | 0.512038 | 5_3:+55302294 | Msa0819170:CDS |
GGAGAAGAAGTTGATGATGA+TGG | 0.521816 | 5_3:+55300378 | Msa0819170:CDS |
CTTCGACATAAAGAAAATAG+AGG | 0.524074 | 5_3:+55301707 | Msa0819170:CDS |
GTAAAACTATAAACGATCTC+GGG | 0.525454 | 5_3:+55302021 | Msa0819170:CDS |
TGAAGAGTCTATCTTGAAGA+AGG | 0.526219 | 5_3:+55302544 | Msa0819170:CDS |
CTGAAGAGGCTCTAAGGAGA+TGG | 0.529424 | 5_3:+55302723 | Msa0819170:CDS |
CAATGAGAGATCTACTCAGC+AGG | 0.529935 | 5_3:+55302858 | Msa0819170:CDS |
TGCTTCTTCTCTGAATCCAA+TGG | 0.531957 | 5_3:+55300357 | Msa0819170:exon |
GAAATCAAGGCTCTATCTGC+TGG | 0.535146 | 5_3:+55302425 | Msa0819170:CDS |
TTTGAATAAGAAGATGAAGA+AGG | 0.538398 | 5_3:+55302067 | Msa0819170:CDS |
CACCCCTCAAAAGGTTGTGA+AGG | 0.541484 | 5_3:+55302223 | Msa0819170:CDS |
ATTTAATGTGAGTTTACAGT+GGG | 0.542684 | 5_3:+55303390 | Msa0819170:three_prime_UTR |
TCAAATGCTTCGAGCAATGA+GGG | 0.544411 | 5_3:+55302952 | Msa0819170:CDS |
ATCCGAATATCATTCCCCTT+AGG | 0.550700 | 5_3:+55303061 | Msa0819170:CDS |
GGTATTGGGAGAATATATTG+AGG | 0.555792 | 5_3:+55303367 | Msa0819170:three_prime_UTR |
GAAACCGAGGATCTTACAGC+TGG | 0.555875 | 5_3:-55302836 | None:intergenic |
CAACTGAACATGAGAATGAC+GGG | 0.556282 | 5_3:+55302990 | Msa0819170:CDS |
CTTGATTTCAGCTAGAGCAA+CGG | 0.565358 | 5_3:-55302411 | None:intergenic |
CTTGATGTGCTTGAAGAACT+GGG | 0.566278 | 5_3:+55301780 | Msa0819170:CDS |
CCGTCATTCTCATGTTCAGT+TGG | 0.568973 | 5_3:-55302989 | None:intergenic |
ATATACTACGACAAAGGAGA+TGG | 0.572916 | 5_3:+55302898 | Msa0819170:CDS |
AAAGAAGCTAAGATGAACCT+TGG | 0.577340 | 5_3:+55301999 | Msa0819170:CDS |
GGTTGTGAAGGATTTCAAAG+TGG | 0.577609 | 5_3:+55302235 | Msa0819170:CDS |
AAAGATGGAAGAAGCTGCAA+TGG | 0.578367 | 5_3:+55302379 | Msa0819170:CDS |
TTAAGACTGCTGAGATGAGG+TGG | 0.586641 | 5_3:+55302345 | Msa0819170:CDS |
TGTTGAACAGTTCAATGGAA+TGG | 0.592209 | 5_3:+55302259 | Msa0819170:CDS |
CTACTACTACTAAAGTTGCA+TGG | 0.593453 | 5_3:-55300321 | None:intergenic |
TCTGCAGAAGTTTCGAAGCA+AGG | 0.594473 | 5_3:+55302293 | Msa0819170:CDS |
TTGTATGTTAGTTTGAAACA+TGG | 0.595393 | 5_3:+55303489 | Msa0819170:three_prime_UTR |
GAAGCCAGCTGTAAGATCCT+CGG | 0.596662 | 5_3:+55302832 | Msa0819170:CDS |
TATCATTTCGCTTTCCTAAG+GGG | 0.598187 | 5_3:-55303075 | None:intergenic |
GATTTAATGTGAGTTTACAG+TGG | 0.599558 | 5_3:+55303389 | Msa0819170:three_prime_UTR |
AGCTATCTCTGCTCAAAATG+TGG | 0.600750 | 5_3:+55302139 | Msa0819170:CDS |
ATATTAAGACTGCTGAGATG+AGG | 0.602890 | 5_3:+55302342 | Msa0819170:CDS |
CCAACTGAACATGAGAATGA+CGG | 0.608552 | 5_3:+55302989 | Msa0819170:CDS |
TCATCGAGTTATGCATAGCT+CGG | 0.611550 | 5_3:-55302769 | None:intergenic |
GTCAAATGCTTCGAGCAATG+AGG | 0.623709 | 5_3:+55302951 | Msa0819170:CDS |
ATATAAGAACCAATAGCGAA+TGG | 0.624917 | 5_3:-55303154 | None:intergenic |
TGACGAATATACTACGACAA+AGG | 0.630375 | 5_3:+55302892 | Msa0819170:CDS |
CTTCAGGTATTTGAAATTCG+GGG | 0.632963 | 5_3:-55302526 | None:intergenic |
AGATATCGATGCACGAGCTG+TGG | 0.636180 | 5_3:-55303129 | None:intergenic |
TGCAGAAGTTTCGAAGCAAG+GGG | 0.640876 | 5_3:+55302295 | Msa0819170:CDS |
TAGATCTCTCATTGAAACCG+AGG | 0.641066 | 5_3:-55302849 | None:intergenic |
TCGGGCGATGAAGTATGGCA+TGG | 0.643983 | 5_3:-55301957 | None:intergenic |
ATATGTGTAGAAGTTTGTGT+TGG | 0.644034 | 5_3:+55303203 | Msa0819170:three_prime_UTR |
AGTTTGTAAAGAGGTAACCA+AGG | 0.706258 | 5_3:-55300529 | None:intergenic |
TGTTCTCGCATAGAAAATCG+CGG | 0.731658 | 5_3:-55302461 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTACTGTTATGATAAAAA+AGG | + | chr5_3:55300595-55300614 | Msa0819170:intron | 15.0% |
!!! | ATTTTGTTTATATAAGCTAT+TGG | + | chr5_3:55300822-55300841 | Msa0819170:intron | 15.0% |
!!! | TTTTGTTTATATAAGCTATT+GGG | + | chr5_3:55300823-55300842 | Msa0819170:intron | 15.0% |
!!! | ACACAATATTCTAAAAAAAT+TGG | + | chr5_3:55302610-55302629 | Msa0819170:CDS | 15.0% |
!!! | TATTTTACTAAGCAGATTTT+TGG | - | chr5_3:55301041-55301060 | None:intergenic | 20.0% |
!!! | GTTATATTTTGACGAATAAT+AGG | - | chr5_3:55301515-55301534 | None:intergenic | 20.0% |
!! | ATTCGTCAAAATATAACAAT+CGG | + | chr5_3:55301518-55301537 | Msa0819170:intron | 20.0% |
!!! | TACTTCATCAATTTTGAAAT+TGG | - | chr5_3:55302579-55302598 | None:intergenic | 20.0% |
!!! | CAATATTCTAAAAAAATTGG+AGG | + | chr5_3:55302613-55302632 | Msa0819170:CDS | 20.0% |
!! | TTTCATGAAGATAATATAAG+AGG | + | chr5_3:55303318-55303337 | Msa0819170:three_prime_UTR | 20.0% |
!! | TTCATTTACCTTATAGTTTA+AGG | + | chr5_3:55303346-55303365 | Msa0819170:three_prime_UTR | 20.0% |
! | AATAGAAAAACAAACAACAC+AGG | - | chr5_3:55300712-55300731 | None:intergenic | 25.0% |
! | ACTATAGAGTGAAAATTTGT+TGG | + | chr5_3:55300773-55300792 | Msa0819170:intron | 25.0% |
!! | AGTTTTTAAATTGCACGATA+AGG | - | chr5_3:55301154-55301173 | None:intergenic | 25.0% |
! | AAGATATGATTAGATGTATC+TGG | - | chr5_3:55301177-55301196 | None:intergenic | 25.0% |
! | AGATACATCTAATCATATCT+TGG | + | chr5_3:55301176-55301195 | Msa0819170:intron | 25.0% |
!!! | AAACATAGAGCATTGAAAAT+TGG | + | chr5_3:55301344-55301363 | Msa0819170:intron | 25.0% |
!!! | GAAAATTGGATTTTGAGATA+AGG | + | chr5_3:55301358-55301377 | Msa0819170:intron | 25.0% |
!! | TCTTACACTTTTCTATTACT+TGG | + | chr5_3:55301423-55301442 | Msa0819170:intron | 25.0% |
! | TTCGTCAAAATATAACAATC+GGG | + | chr5_3:55301519-55301538 | Msa0819170:intron | 25.0% |
! | CATTGTTAGATAGAATGTAT+TGG | - | chr5_3:55301610-55301629 | None:intergenic | 25.0% |
! | TTTGAATAAGAAGATGAAGA+AGG | + | chr5_3:55302067-55302086 | Msa0819170:CDS | 25.0% |
!! | AAAGTAAAATCCTTTTCTAC+AGG | - | chr5_3:55302200-55302219 | None:intergenic | 25.0% |
!! | TATTCTAAAAAAATTGGAGG+AGG | + | chr5_3:55302616-55302635 | Msa0819170:CDS | 25.0% |
!!! | ATTTTAACGGAAGCTTTAAA+CGG | + | chr5_3:55302668-55302687 | Msa0819170:CDS | 25.0% |
!! | CTTATATTTTGTGAGCTTTT+TGG | + | chr5_3:55303170-55303189 | Msa0819170:three_prime_UTR | 25.0% |
!! | TACCTTATAGTTTAAGGTAT+TGG | + | chr5_3:55303352-55303371 | Msa0819170:three_prime_UTR | 25.0% |
!! | ACCTTATAGTTTAAGGTATT+GGG | + | chr5_3:55303353-55303372 | Msa0819170:three_prime_UTR | 25.0% |
! | ATTTAATGTGAGTTTACAGT+GGG | + | chr5_3:55303390-55303409 | Msa0819170:three_prime_UTR | 25.0% |
!! | TTGTATGTTAGTTTGAAACA+TGG | + | chr5_3:55303489-55303508 | Msa0819170:three_prime_UTR | 25.0% |
!! | TGTATGTTAGTTTGAAACAT+GGG | + | chr5_3:55303490-55303509 | Msa0819170:three_prime_UTR | 25.0% |
!! | GATGATGATGGAATATTCAT+TGG | + | chr5_3:55300390-55300409 | Msa0819170:CDS | 30.0% |
ATTGGAAAAAGAAGAAGAGA+TGG | + | chr5_3:55300408-55300427 | Msa0819170:CDS | 30.0% | |
AAAGAAGAAGAGATGGAAAA+TGG | + | chr5_3:55300415-55300434 | Msa0819170:CDS | 30.0% | |
! | AAATGTAAAATCGACTTCAC+TGG | + | chr5_3:55300626-55300645 | Msa0819170:intron | 30.0% |
! | AATGTAAAATCGACTTCACT+GGG | + | chr5_3:55300627-55300646 | Msa0819170:intron | 30.0% |
ATTGTCAGACCAAACTAAAT+GGG | - | chr5_3:55300891-55300910 | None:intergenic | 30.0% | |
TAGTGAATTGCGAAAAATTG+AGG | + | chr5_3:55301011-55301030 | Msa0819170:intron | 30.0% | |
GACTTATTTCAACTACTATG+TGG | - | chr5_3:55301078-55301097 | None:intergenic | 30.0% | |
AATCACACAATAATGACACT+TGG | - | chr5_3:55301242-55301261 | None:intergenic | 30.0% | |
!! | GTAGAATAGTTTTACACTGT+CGG | + | chr5_3:55301277-55301296 | Msa0819170:intron | 30.0% |
ACATCAGAGTGAATTACAAA+GGG | - | chr5_3:55301653-55301672 | None:intergenic | 30.0% | |
AACATCAGAGTGAATTACAA+AGG | - | chr5_3:55301654-55301673 | None:intergenic | 30.0% | |
CTTCGACATAAAGAAAATAG+AGG | + | chr5_3:55301707-55301726 | Msa0819170:CDS | 30.0% | |
! | TAATTTCTCGAGAATCGTTT+TGG | - | chr5_3:55301811-55301830 | None:intergenic | 30.0% |
! | TTCGCAATATTTTCTCTTGA+CGG | - | chr5_3:55301929-55301948 | None:intergenic | 30.0% |
!! | CATCTTAGCTTCTTTTAACT+CGG | - | chr5_3:55301994-55302013 | None:intergenic | 30.0% |
!! | GATCGTTTATAGTTTTACCA+AGG | - | chr5_3:55302019-55302038 | None:intergenic | 30.0% |
GGTAAAACTATAAACGATCT+CGG | + | chr5_3:55302020-55302039 | Msa0819170:CDS | 30.0% | |
GTAAAACTATAAACGATCTC+GGG | + | chr5_3:55302021-55302040 | Msa0819170:CDS | 30.0% | |
!!! | CTTTGTCATTGCTTCTTTTT+TGG | - | chr5_3:55302165-55302184 | None:intergenic | 30.0% |
! | TCTTCAGGTATTTGAAATTC+GGG | - | chr5_3:55302530-55302549 | None:intergenic | 30.0% |
! | CTCTTCAGGTATTTGAAATT+CGG | - | chr5_3:55302531-55302550 | None:intergenic | 30.0% |
! | ACGCAGCAAAGAAATTTTAA+CGG | + | chr5_3:55302655-55302674 | Msa0819170:CDS | 30.0% |
GATTCCTGAAAACTATCTAA+AGG | + | chr5_3:55302745-55302764 | Msa0819170:CDS | 30.0% | |
TTATCATTTCGCTTTCCTAA+GGG | - | chr5_3:55303079-55303098 | None:intergenic | 30.0% | |
TTTATCATTTCGCTTTCCTA+AGG | - | chr5_3:55303080-55303099 | None:intergenic | 30.0% | |
ATATAAGAACCAATAGCGAA+TGG | - | chr5_3:55303157-55303176 | None:intergenic | 30.0% | |
!! | TATTTTGTGAGCTTTTTGGT+TGG | + | chr5_3:55303174-55303193 | Msa0819170:three_prime_UTR | 30.0% |
ATATGTGTAGAAGTTTGTGT+TGG | + | chr5_3:55303203-55303222 | Msa0819170:three_prime_UTR | 30.0% | |
TCCCAATACCTTAAACTATA+AGG | - | chr5_3:55303357-55303376 | None:intergenic | 30.0% | |
GATTTAATGTGAGTTTACAG+TGG | + | chr5_3:55303389-55303408 | Msa0819170:three_prime_UTR | 30.0% | |
CTACTACTACTAAAGTTGCA+TGG | - | chr5_3:55300324-55300343 | None:intergenic | 35.0% | |
ATCATCAACTTCTTCTCCAT+TGG | - | chr5_3:55300376-55300395 | None:intergenic | 35.0% | |
GCTTCTTTAACAGACTCAAA+TGG | - | chr5_3:55300484-55300503 | None:intergenic | 35.0% | |
! | AAAGAAGCTGTTACTCGTTT+TGG | + | chr5_3:55300496-55300515 | Msa0819170:CDS | 35.0% |
AGTTTGTAAAGAGGTAACCA+AGG | - | chr5_3:55300532-55300551 | None:intergenic | 35.0% | |
TGGTTACCTCTTTACAAACT+TGG | + | chr5_3:55300532-55300551 | Msa0819170:CDS | 35.0% | |
! | ATGTAAAATCGACTTCACTG+GGG | + | chr5_3:55300628-55300647 | Msa0819170:intron | 35.0% |
TGCAGAAAACCCATTTAGTT+TGG | + | chr5_3:55300879-55300898 | Msa0819170:intron | 35.0% | |
CATTGTCAGACCAAACTAAA+TGG | - | chr5_3:55300892-55300911 | None:intergenic | 35.0% | |
! | TTGGTCTGACAATGTTACTT+TGG | + | chr5_3:55300898-55300917 | Msa0819170:intron | 35.0% |
!! | TGGTCTGACAATGTTACTTT+GGG | + | chr5_3:55300899-55300918 | Msa0819170:intron | 35.0% |
ATATCAGATTCGATTGTCCT+CGG | + | chr5_3:55300946-55300965 | Msa0819170:intron | 35.0% | |
CTTAGTAAAATAGCAGACAG+AGG | + | chr5_3:55301049-55301068 | Msa0819170:intron | 35.0% | |
TGTAAGATCAGAGTCGAATT+TGG | - | chr5_3:55301410-55301429 | None:intergenic | 35.0% | |
ATAATAGGCACTAACAAGAC+AGG | - | chr5_3:55301500-55301519 | None:intergenic | 35.0% | |
ACGAGTATGTGAAAATCACA+AGG | - | chr5_3:55301583-55301602 | None:intergenic | 35.0% | |
CATCAGAGTGAATTACAAAG+GGG | - | chr5_3:55301652-55301671 | None:intergenic | 35.0% | |
TAACTCGGTTAGCAACATAT+CGG | - | chr5_3:55301979-55301998 | None:intergenic | 35.0% | |
AAAGAAGCTAAGATGAACCT+TGG | + | chr5_3:55301999-55302018 | Msa0819170:CDS | 35.0% | |
! | AATCCTTCACAACCTTTTGA+GGG | - | chr5_3:55302229-55302248 | None:intergenic | 35.0% |
! | AAATCCTTCACAACCTTTTG+AGG | - | chr5_3:55302230-55302249 | None:intergenic | 35.0% |
TGTTGAACAGTTCAATGGAA+TGG | + | chr5_3:55302259-55302278 | Msa0819170:CDS | 35.0% | |
ATATTAAGACTGCTGAGATG+AGG | + | chr5_3:55302342-55302361 | Msa0819170:CDS | 35.0% | |
! | CTTCAGGTATTTGAAATTCG+GGG | - | chr5_3:55302529-55302548 | None:intergenic | 35.0% |
TTCTTCAAGATAGACTCTTC+AGG | - | chr5_3:55302545-55302564 | None:intergenic | 35.0% | |
TGAAGAGTCTATCTTGAAGA+AGG | + | chr5_3:55302544-55302563 | Msa0819170:CDS | 35.0% | |
TTTGTCGTAGTATATTCGTC+AGG | - | chr5_3:55302893-55302912 | None:intergenic | 35.0% | |
TGACGAATATACTACGACAA+AGG | + | chr5_3:55302892-55302911 | Msa0819170:CDS | 35.0% | |
ATATACTACGACAAAGGAGA+TGG | + | chr5_3:55302898-55302917 | Msa0819170:CDS | 35.0% | |
CTTCTTCTTCTGATGTGATA+TGG | - | chr5_3:55303032-55303051 | None:intergenic | 35.0% | |
TCACATCAGAAGAAGAAGTT+TGG | + | chr5_3:55303034-55303053 | Msa0819170:CDS | 35.0% | |
TTCCTAAGGGGAATGATATT+CGG | - | chr5_3:55303066-55303085 | None:intergenic | 35.0% | |
TATCATTTCGCTTTCCTAAG+GGG | - | chr5_3:55303078-55303097 | None:intergenic | 35.0% | |
! | CTAACAAAGCACTCTCTATT+GGG | + | chr5_3:55303253-55303272 | Msa0819170:three_prime_UTR | 35.0% |
! | GGTATTGGGAGAATATATTG+AGG | + | chr5_3:55303367-55303386 | Msa0819170:three_prime_UTR | 35.0% |
TGCTTCTTCTCTGAATCCAA+TGG | + | chr5_3:55300357-55300376 | Msa0819170:exon | 40.0% | |
!! | GGAGAAGAAGTTGATGATGA+TGG | + | chr5_3:55300378-55300397 | Msa0819170:CDS | 40.0% |
GCTTCACCAAGTTTGTAAAG+AGG | - | chr5_3:55300541-55300560 | None:intergenic | 40.0% | |
ACAAACAACACAGGACTTCA+TGG | - | chr5_3:55300703-55300722 | None:intergenic | 40.0% | |
CCAAACTAGTACACTGGTAT+TGG | - | chr5_3:55300974-55300993 | None:intergenic | 40.0% | |
CCAATACCAGTGTACTAGTT+TGG | + | chr5_3:55300971-55300990 | Msa0819170:intron | 40.0% | |
AAGAAGCCAAACTAGTACAC+TGG | - | chr5_3:55300980-55300999 | None:intergenic | 40.0% | |
GAAAATAACAGCCACCATTC+AGG | - | chr5_3:55301113-55301132 | None:intergenic | 40.0% | |
ACTTGATGTGCTTGAAGAAC+TGG | + | chr5_3:55301779-55301798 | Msa0819170:CDS | 40.0% | |
CTTGATGTGCTTGAAGAACT+GGG | + | chr5_3:55301780-55301799 | Msa0819170:CDS | 40.0% | |
ACTCAATCGTGCGAAAATCT+TGG | + | chr5_3:55301870-55301889 | Msa0819170:CDS | 40.0% | |
! | GCAATATTTTCTCTTGACGG+TGG | - | chr5_3:55301926-55301945 | None:intergenic | 40.0% |
AACTCGGTTAGCAACATATC+GGG | - | chr5_3:55301978-55301997 | None:intergenic | 40.0% | |
!! | AGGAAAGACTTTTTCTCGAG+AGG | + | chr5_3:55302087-55302106 | Msa0819170:CDS | 40.0% |
AGCTATCTCTGCTCAAAATG+TGG | + | chr5_3:55302139-55302158 | Msa0819170:CDS | 40.0% | |
! | TACTTTTGACACCCCTCAAA+AGG | + | chr5_3:55302214-55302233 | Msa0819170:CDS | 40.0% |
! | ATCCTTCACAACCTTTTGAG+GGG | - | chr5_3:55302228-55302247 | None:intergenic | 40.0% |
GGTTGTGAAGGATTTCAAAG+TGG | + | chr5_3:55302235-55302254 | Msa0819170:CDS | 40.0% | |
GTGGATGTTGAACAGTTCAA+TGG | + | chr5_3:55302254-55302273 | Msa0819170:CDS | 40.0% | |
! | GTGGTTTGCAGCTAAAAAGA+TGG | + | chr5_3:55302364-55302383 | Msa0819170:CDS | 40.0% |
AAAGATGGAAGAAGCTGCAA+TGG | + | chr5_3:55302379-55302398 | Msa0819170:CDS | 40.0% | |
CTTGATTTCAGCTAGAGCAA+CGG | - | chr5_3:55302414-55302433 | None:intergenic | 40.0% | |
TGTTCTCGCATAGAAAATCG+CGG | - | chr5_3:55302464-55302483 | None:intergenic | 40.0% | |
TTTGCTGCGTAGAACTTCTT+TGG | - | chr5_3:55302645-55302664 | None:intergenic | 40.0% | |
! | CGGTCCTTTAGATAGTTTTC+AGG | - | chr5_3:55302752-55302771 | None:intergenic | 40.0% |
TCATCGAGTTATGCATAGCT+CGG | - | chr5_3:55302772-55302791 | None:intergenic | 40.0% | |
TAGATCTCTCATTGAAACCG+AGG | - | chr5_3:55302852-55302871 | None:intergenic | 40.0% | |
TCAAATGCTTCGAGCAATGA+GGG | + | chr5_3:55302952-55302971 | Msa0819170:CDS | 40.0% | |
CCAACTGAACATGAGAATGA+CGG | + | chr5_3:55302989-55303008 | Msa0819170:CDS | 40.0% | |
CAACTGAACATGAGAATGAC+GGG | + | chr5_3:55302990-55303009 | Msa0819170:CDS | 40.0% | |
!! | GATGTGATATGGACTGCTTT+TGG | - | chr5_3:55303021-55303040 | None:intergenic | 40.0% |
ATCCGAATATCATTCCCCTT+AGG | + | chr5_3:55303061-55303080 | Msa0819170:CDS | 40.0% | |
!! | CCAATAGAGAGTGCTTTGTT+AGG | - | chr5_3:55303255-55303274 | None:intergenic | 40.0% |
! | CCTAACAAAGCACTCTCTAT+TGG | + | chr5_3:55303252-55303271 | Msa0819170:three_prime_UTR | 40.0% |
TGGGAATTCAAGTGCAAGTT+TGG | + | chr5_3:55303272-55303291 | Msa0819170:three_prime_UTR | 40.0% | |
! | TCAAGTGCAAGTTTGGAGTT+TGG | + | chr5_3:55303279-55303298 | Msa0819170:three_prime_UTR | 40.0% |
! | GAAGCTGTTACTCGTTTTGG+TGG | + | chr5_3:55300499-55300518 | Msa0819170:CDS | 45.0% |
!! | GTTACTCGTTTTGGTGGAAG+TGG | + | chr5_3:55300505-55300524 | Msa0819170:CDS | 45.0% |
TCTACGGAACCAGAGATTCT+GGG | - | chr5_3:55300660-55300679 | None:intergenic | 45.0% | |
ACTTCATGGCCCAATGGATA+AGG | - | chr5_3:55300689-55300708 | None:intergenic | 45.0% | |
TCATCTAGCAGCAACCTGAA+TGG | + | chr5_3:55301096-55301115 | Msa0819170:intron | 45.0% | |
GGGACTAACAAGATGCGTTA+GGG | + | chr5_3:55301539-55301558 | Msa0819170:intron | 45.0% | |
AGAGGAACAAGCAGCAAAGT+TGG | + | chr5_3:55301725-55301744 | Msa0819170:CDS | 45.0% | |
! | GACGGTGGACAATCTTTTCA+GGG | - | chr5_3:55301911-55301930 | None:intergenic | 45.0% |
! | TGACGGTGGACAATCTTTTC+AGG | - | chr5_3:55301912-55301931 | None:intergenic | 45.0% |
ACATATCGGGCGATGAAGTA+TGG | - | chr5_3:55301965-55301984 | None:intergenic | 45.0% | |
!! | GACTTTTTCTCGAGAGGACA+CGG | + | chr5_3:55302093-55302112 | Msa0819170:CDS | 45.0% |
!! | ACTTTTTCTCGAGAGGACAC+GGG | + | chr5_3:55302094-55302113 | Msa0819170:CDS | 45.0% |
! | TTTTCTACAGGAGCTTCTGG+TGG | - | chr5_3:55302188-55302207 | None:intergenic | 45.0% |
ACCAGAAGCTCCTGTAGAAA+AGG | + | chr5_3:55302187-55302206 | Msa0819170:CDS | 45.0% | |
! | TCCTTTTCTACAGGAGCTTC+TGG | - | chr5_3:55302191-55302210 | None:intergenic | 45.0% |
TCTGCAGAAGTTTCGAAGCA+AGG | + | chr5_3:55302293-55302312 | Msa0819170:CDS | 45.0% | |
CTGCAGAAGTTTCGAAGCAA+GGG | + | chr5_3:55302294-55302313 | Msa0819170:CDS | 45.0% | |
TGCAGAAGTTTCGAAGCAAG+GGG | + | chr5_3:55302295-55302314 | Msa0819170:CDS | 45.0% | |
TTAAGACTGCTGAGATGAGG+TGG | + | chr5_3:55302345-55302364 | Msa0819170:CDS | 45.0% | |
CGTTGCTCTAGCTGAAATCA+AGG | + | chr5_3:55302412-55302431 | Msa0819170:CDS | 45.0% | |
GAAATCAAGGCTCTATCTGC+TGG | + | chr5_3:55302425-55302444 | Msa0819170:CDS | 45.0% | |
CAATGAGAGATCTACTCAGC+AGG | + | chr5_3:55302858-55302877 | Msa0819170:CDS | 45.0% | |
GTCAAATGCTTCGAGCAATG+AGG | + | chr5_3:55302951-55302970 | Msa0819170:CDS | 45.0% | |
CCGTCATTCTCATGTTCAGT+TGG | - | chr5_3:55302992-55303011 | None:intergenic | 45.0% | |
GATATCTCGCCATTCGCTAT+TGG | + | chr5_3:55303145-55303164 | Msa0819170:three_prime_UTR | 45.0% | |
!! | TAAATAATAAATAATAGTAT+CGG | - | chr5_3:55301318-55301337 | None:intergenic | 5.0% |
!! | GTTTTGGTGGAAGTGGTCCT+TGG | + | chr5_3:55300512-55300531 | Msa0819170:CDS | 50.0% |
GTCTACGGAACCAGAGATTC+TGG | - | chr5_3:55300661-55300680 | None:intergenic | 50.0% | |
!! | ATGGATAAGGCGCTGGTCTA+CGG | - | chr5_3:55300676-55300695 | None:intergenic | 50.0% |
TAGACCAGCGCCTTATCCAT+TGG | + | chr5_3:55300676-55300695 | Msa0819170:intron | 50.0% | |
AGACCAGCGCCTTATCCATT+GGG | + | chr5_3:55300677-55300696 | Msa0819170:intron | 50.0% | |
TCTAGCAGCAACCTGAATGG+TGG | + | chr5_3:55301099-55301118 | Msa0819170:intron | 50.0% | |
CGGGACTAACAAGATGCGTT+AGG | + | chr5_3:55301538-55301557 | Msa0819170:intron | 50.0% | |
CACCCCTCAAAAGGTTGTGA+AGG | + | chr5_3:55302223-55302242 | Msa0819170:CDS | 50.0% | |
TTCAGCTAGAGCAACGGCTT+CGG | - | chr5_3:55302408-55302427 | None:intergenic | 50.0% | |
! | AAAGCAACGTGCTGCTGAAG+AGG | + | chr5_3:55302709-55302728 | Msa0819170:CDS | 50.0% |
!! | CTGAAGAGGCTCTAAGGAGA+TGG | + | chr5_3:55302723-55302742 | Msa0819170:CDS | 50.0% |
GAAGCCAGCTGTAAGATCCT+CGG | + | chr5_3:55302832-55302851 | Msa0819170:CDS | 50.0% | |
GAAACCGAGGATCTTACAGC+TGG | - | chr5_3:55302839-55302858 | None:intergenic | 50.0% | |
AGATCTACTCAGCAGGAAGC+AGG | + | chr5_3:55302865-55302884 | Msa0819170:CDS | 50.0% | |
! | GGAAGAGCACGCTGAAACAA+AGG | + | chr5_3:55302919-55302938 | Msa0819170:CDS | 50.0% |
CGAGCTGTGGCATAAGCATT+AGG | - | chr5_3:55303119-55303138 | None:intergenic | 50.0% | |
AGATATCGATGCACGAGCTG+TGG | - | chr5_3:55303132-55303151 | None:intergenic | 50.0% | |
GGGATCGAACCCAGAATCTC+TGG | + | chr5_3:55300648-55300667 | Msa0819170:intron | 55.0% | |
CACAGGACTTCATGGCCCAA+TGG | - | chr5_3:55300695-55300714 | None:intergenic | 55.0% | |
!! | GTACACTGGTATTGGCACCG+AGG | - | chr5_3:55300966-55300985 | None:intergenic | 55.0% |
TCGGGCGATGAAGTATGGCA+TGG | - | chr5_3:55301960-55301979 | None:intergenic | 55.0% | |
! | GTGCTGCTGAAGAGGCTCTA+AGG | + | chr5_3:55302717-55302736 | Msa0819170:CDS | 55.0% |
TGGCCCAATGGATAAGGCGC+TGG | - | chr5_3:55300683-55300702 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 55300266 | 55303581 | 55300266 | ID=Msa0819170;Name=Msa0819170 |
chr5_3 | mRNA | 55300266 | 55303581 | 55300266 | ID=Msa0819170-mRNA-1;Parent=Msa0819170;Name=Msa0819170-mRNA-1;_AED=0.00;_eAED=0.00;_QI=110|1|1|1|1|1|2|473|534 |
chr5_3 | exon | 55300266 | 55300564 | 55300266 | ID=Msa0819170-mRNA-1:exon:16812;Parent=Msa0819170-mRNA-1 |
chr5_3 | exon | 55301693 | 55303581 | 55301693 | ID=Msa0819170-mRNA-1:exon:16813;Parent=Msa0819170-mRNA-1 |
chr5_3 | five_prime_UTR | 55300266 | 55300375 | 55300266 | ID=Msa0819170-mRNA-1:five_prime_utr;Parent=Msa0819170-mRNA-1 |
chr5_3 | CDS | 55300376 | 55300564 | 55300376 | ID=Msa0819170-mRNA-1:cds;Parent=Msa0819170-mRNA-1 |
chr5_3 | CDS | 55301693 | 55303108 | 55301693 | ID=Msa0819170-mRNA-1:cds;Parent=Msa0819170-mRNA-1 |
chr5_3 | three_prime_UTR | 55303109 | 55303581 | 55303109 | ID=Msa0819170-mRNA-1:three_prime_utr;Parent=Msa0819170-mRNA-1 |
Gene Sequence |
Protein sequence |