Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261090 | XP_013464983.1 | 86.260 | 262 | 9 | 1 | 7 | 241 | 46 | 307 | 1.84e-143 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261090 | sp|Q8VZU2|SY132_ARATH | 62.977 | 262 | 68 | 2 | 7 | 240 | 41 | 301 | 1.39e-91 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261090 | V7BY22 | 82.443 | 262 | 19 | 1 | 7 | 241 | 45 | 306 | 2.25e-136 | 395 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012200 | Msa0261090 | 0.803937 | 2.746978e-49 | -8.615850e-47 |
| Msa0032470 | Msa0261090 | 0.835783 | 1.372258e-56 | -8.615850e-47 |
| Msa0044260 | Msa0261090 | 0.801047 | 1.082370e-48 | -8.615850e-47 |
| Msa0044330 | Msa0261090 | 0.800290 | 1.544455e-48 | -8.615850e-47 |
| Msa0072420 | Msa0261090 | 0.825019 | 5.889872e-54 | -8.615850e-47 |
| Msa0079070 | Msa0261090 | 0.800725 | 1.259577e-48 | -8.615850e-47 |
| Msa0081780 | Msa0261090 | 0.821754 | 3.413034e-53 | -8.615850e-47 |
| Msa0083280 | Msa0261090 | 0.813262 | 2.798502e-51 | -8.615850e-47 |
| Msa0101500 | Msa0261090 | -0.815216 | 1.035588e-51 | -8.615850e-47 |
| Msa0114060 | Msa0261090 | 0.810831 | 9.479558e-51 | -8.615850e-47 |
| Msa0115790 | Msa0261090 | 0.849137 | 3.921303e-60 | -8.615850e-47 |
| Msa0127650 | Msa0261090 | 0.806439 | 8.221440e-50 | -8.615850e-47 |
| Msa0148080 | Msa0261090 | 0.842256 | 2.890373e-58 | -8.615850e-47 |
| Msa0168690 | Msa0261090 | 0.824097 | 9.708891e-54 | -8.615850e-47 |
| Msa0204960 | Msa0261090 | 0.806716 | 7.185728e-50 | -8.615850e-47 |
| Msa0219590 | Msa0261090 | 0.871726 | 5.488163e-67 | -8.615850e-47 |
| Msa0240920 | Msa0261090 | 0.831387 | 1.717743e-55 | -8.615850e-47 |
| Msa0261090 | Msa0271510 | 0.821509 | 3.888994e-53 | -8.615850e-47 |
| Msa0261090 | Msa0287870 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
| Msa0261090 | Msa0305410 | 0.813770 | 2.162869e-51 | -8.615850e-47 |
| Msa0261090 | Msa0317940 | 0.819583 | 1.076346e-52 | -8.615850e-47 |
| Msa0261090 | Msa0318680 | 0.831138 | 1.977959e-55 | -8.615850e-47 |
| Msa0261090 | Msa0363790 | 0.809322 | 2.003770e-50 | -8.615850e-47 |
| Msa0261090 | Msa0398670 | 0.838742 | 2.400672e-57 | -8.615850e-47 |
| Msa0261090 | Msa0425170 | 0.807101 | 5.958338e-50 | -8.615850e-47 |
| Msa0261090 | Msa0436760 | 0.807977 | 3.883288e-50 | -8.615850e-47 |
| Msa0261090 | Msa0454360 | 0.826174 | 3.136026e-54 | -8.615850e-47 |
| Msa0261090 | Msa0471670 | 0.801198 | 1.008343e-48 | -8.615850e-47 |
| Msa0261090 | Msa0484720 | 0.809205 | 2.123052e-50 | -8.615850e-47 |
| Msa0261090 | Msa0530560 | 0.834839 | 2.376843e-56 | -8.615850e-47 |
| Msa0261090 | Msa0535630 | 0.805553 | 1.262758e-49 | -8.615850e-47 |
| Msa0261090 | Msa0611540 | -0.802585 | 5.231596e-49 | -8.615850e-47 |
| Msa0261090 | Msa0689250 | 0.809180 | 2.149607e-50 | -8.615850e-47 |
| Msa0261090 | Msa0711450 | 0.801511 | 8.699731e-49 | -8.615850e-47 |
| Msa0261090 | Msa0741440 | 0.835016 | 2.144202e-56 | -8.615850e-47 |
| Msa0261090 | Msa0760180 | 0.802717 | 4.913361e-49 | -8.615850e-47 |
| Msa0261090 | Msa0760250 | 0.804908 | 1.723471e-49 | -8.615850e-47 |
| Msa0261090 | Msa0796250 | 0.820378 | 7.081712e-53 | -8.615850e-47 |
| Msa0261090 | Msa0802010 | 0.808379 | 3.188666e-50 | -8.615850e-47 |
| Msa0261090 | Msa0818060 | 0.816077 | 6.657826e-52 | -8.615850e-47 |
| Msa0261090 | Msa0822500 | 0.810254 | 1.263000e-50 | -8.615850e-47 |
| Msa0261090 | Msa0827930 | 0.809240 | 2.086667e-50 | -8.615850e-47 |
| Msa0261090 | Msa0832340 | 0.802274 | 6.064157e-49 | -8.615850e-47 |
| Msa0261090 | Msa0849040 | 0.833569 | 4.946144e-56 | -8.615850e-47 |
| Msa0261090 | Msa0858390 | 0.825651 | 4.174071e-54 | -8.615850e-47 |
| Msa0261090 | Msa0878220 | 0.860088 | 2.635828e-63 | -8.615850e-47 |
| Msa0261090 | Msa0894710 | 0.803248 | 3.816327e-49 | -8.615850e-47 |
| Msa0261090 | Msa0898750 | 0.807999 | 3.842377e-50 | -8.615850e-47 |
| Msa0261090 | Msa0899750 | 0.823822 | 1.126301e-53 | -8.615850e-47 |
| Msa0261090 | Msa0928130 | 0.819037 | 1.432932e-52 | -8.615850e-47 |
| Msa0261090 | Msa0943970 | 0.802794 | 4.736843e-49 | -8.615850e-47 |
| Msa0261090 | Msa0944020 | 0.821400 | 4.119510e-53 | -8.615850e-47 |
| Msa0261090 | Msa0945630 | 0.802113 | 6.544888e-49 | -8.615850e-47 |
| Msa0261090 | Msa0964310 | 0.803884 | 2.816485e-49 | -8.615850e-47 |
| Msa0261090 | Msa1077130 | 0.809709 | 1.655102e-50 | -8.615850e-47 |
| Msa0261090 | Msa1077200 | 0.802379 | 5.770390e-49 | -8.615850e-47 |
| Msa0261090 | Msa1101090 | 0.802283 | 6.038319e-49 | -8.615850e-47 |
| Msa0261090 | Msa1108760 | 0.803456 | 3.456661e-49 | -8.615850e-47 |
| Msa0261090 | Msa1137780 | 0.800751 | 1.244021e-48 | -8.615850e-47 |
| Msa0261090 | Msa1163090 | 0.802532 | 5.364649e-49 | -8.615850e-47 |
| Msa0261090 | Msa1179630 | 0.806361 | 8.539073e-50 | -8.615850e-47 |
| Msa0261090 | Msa1184910 | 0.810164 | 1.320971e-50 | -8.615850e-47 |
| Msa0261090 | Msa1207310 | 0.807439 | 5.051867e-50 | -8.615850e-47 |
| Msa0261090 | Msa1213890 | 0.813075 | 3.075483e-51 | -8.615850e-47 |
| Msa0261090 | Msa1232700 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
| Msa0261090 | Msa1325410 | -0.801130 | 1.040829e-48 | -8.615850e-47 |
| Msa0261090 | Msa1329200 | 0.801020 | 1.096439e-48 | -8.615850e-47 |
| Msa0261090 | Msa1331320 | 0.827618 | 1.416239e-54 | -8.615850e-47 |
| Msa0261090 | Msa1335540 | 0.800521 | 1.386220e-48 | -8.615850e-47 |
| Msa0261090 | Msa1336290 | 0.818211 | 2.206241e-52 | -8.615850e-47 |
| Msa0261090 | Msa1346840 | 0.820476 | 6.723592e-53 | -8.615850e-47 |
| Msa0261090 | Msa1347760 | 0.818477 | 1.921032e-52 | -8.615850e-47 |
| Msa0261090 | Msa1351890 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0261090 | Msa1355180 | 0.816146 | 6.428169e-52 | -8.615850e-47 |
| Msa0261090 | Msa1358500 | 0.814791 | 1.287205e-51 | -8.615850e-47 |
| Msa0261090 | Msa1374470 | 0.834437 | 2.999255e-56 | -8.615850e-47 |
| Msa0261090 | Msa1384750 | 0.812327 | 4.482776e-51 | -8.615850e-47 |
| Msa0261090 | Msa1401990 | 0.834992 | 2.174187e-56 | -8.615850e-47 |
| Msa0261090 | Msa1404300 | 0.800686 | 1.282893e-48 | -8.615850e-47 |
| Msa0261090 | Msa1419690 | 0.858846 | 6.221671e-63 | -8.615850e-47 |
| Msa0261090 | Msa1442920 | 0.834524 | 2.852247e-56 | -8.615850e-47 |
| Msa0261090 | Msa1448560 | 0.803256 | 3.801275e-49 | -8.615850e-47 |
| Msa0261090 | Msa1452710 | 0.846261 | 2.427771e-59 | -8.615850e-47 |
| Msa0261090 | Msa1453880 | 0.800790 | 1.221403e-48 | -8.615850e-47 |
| Msa0261090 | Msa1457620 | 0.823939 | 1.057085e-53 | -8.615850e-47 |
| Msa0261090 | Msa1458680 | 0.812495 | 4.120539e-51 | -8.615850e-47 |
| Msa0261090 | Msa1463900 | 0.803085 | 4.124507e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261090 | MtrunA17_Chr2g0322801 | 86.260 | 262 | 9 | 1 | 7 | 241 | 46 | 307 | 1.69e-147 | 414 |
| Msa0261090 | MtrunA17_Chr6g0461261 | 57.529 | 259 | 83 | 1 | 7 | 238 | 41 | 299 | 7.55e-92 | 272 |
| Msa0261090 | MtrunA17_Chr2g0281201 | 43.089 | 246 | 113 | 1 | 17 | 235 | 4 | 249 | 1.56e-66 | 206 |
| Msa0261090 | MtrunA17_Chr4g0048121 | 46.341 | 246 | 102 | 3 | 1 | 219 | 38 | 280 | 6.81e-66 | 206 |
| Msa0261090 | MtrunA17_Chr1g0177131 | 42.105 | 266 | 124 | 3 | 1 | 239 | 49 | 311 | 4.10e-58 | 187 |
| Msa0261090 | MtrunA17_Chr5g0398891 | 40.574 | 244 | 114 | 3 | 5 | 217 | 53 | 296 | 3.05e-52 | 172 |
| Msa0261090 | MtrunA17_Chr1g0177121 | 38.235 | 238 | 120 | 2 | 7 | 217 | 48 | 285 | 1.01e-50 | 167 |
| Msa0261090 | MtrunA17_Chr7g0267551 | 35.000 | 240 | 129 | 2 | 7 | 219 | 35 | 274 | 3.55e-44 | 150 |
| Msa0261090 | MtrunA17_Chr5g0404401 | 32.189 | 233 | 119 | 5 | 13 | 216 | 54 | 276 | 3.02e-29 | 111 |
| Msa0261090 | MtrunA17_Chr2g0322811 | 61.538 | 52 | 20 | 0 | 188 | 239 | 124 | 175 | 2.34e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261090 | AT5G08080.1 | 62.977 | 262 | 68 | 2 | 7 | 240 | 41 | 301 | 1.42e-92 | 275 |
| Msa0261090 | AT5G08080.4 | 62.977 | 262 | 68 | 2 | 7 | 240 | 41 | 301 | 1.42e-92 | 275 |
| Msa0261090 | AT3G03800.2 | 57.143 | 259 | 84 | 1 | 7 | 238 | 42 | 300 | 2.03e-92 | 274 |
| Msa0261090 | AT3G03800.1 | 57.143 | 259 | 84 | 1 | 7 | 238 | 42 | 300 | 2.03e-92 | 274 |
| Msa0261090 | AT5G08080.3 | 64.463 | 242 | 57 | 2 | 27 | 240 | 72 | 312 | 8.61e-92 | 273 |
| Msa0261090 | AT1G61290.1 | 41.057 | 246 | 118 | 2 | 17 | 235 | 50 | 295 | 1.48e-62 | 198 |
| Msa0261090 | AT1G61290.2 | 41.057 | 246 | 118 | 2 | 17 | 235 | 50 | 295 | 1.48e-62 | 198 |
| Msa0261090 | AT1G11250.1 | 45.652 | 230 | 98 | 2 | 17 | 219 | 45 | 274 | 3.95e-61 | 194 |
| Msa0261090 | AT3G11820.2 | 42.910 | 268 | 116 | 2 | 11 | 241 | 14 | 281 | 1.06e-58 | 188 |
| Msa0261090 | AT3G11820.1 | 42.910 | 268 | 116 | 2 | 11 | 241 | 45 | 312 | 3.00e-58 | 188 |
| Msa0261090 | AT4G03330.1 | 40.000 | 240 | 117 | 1 | 7 | 219 | 43 | 282 | 2.06e-56 | 182 |
| Msa0261090 | AT3G52400.1 | 40.377 | 265 | 131 | 1 | 4 | 241 | 47 | 311 | 2.11e-53 | 176 |
| Msa0261090 | AT5G08080.5 | 51.553 | 161 | 49 | 2 | 7 | 139 | 41 | 200 | 6.58e-41 | 140 |
| Msa0261090 | AT5G08080.2 | 51.553 | 161 | 49 | 2 | 7 | 139 | 41 | 200 | 6.58e-41 | 140 |
| Msa0261090 | AT1G08560.1 | 36.245 | 229 | 114 | 4 | 17 | 217 | 62 | 286 | 4.46e-40 | 140 |
| Msa0261090 | AT2G18260.2 | 30.328 | 244 | 146 | 5 | 14 | 235 | 61 | 302 | 1.25e-29 | 113 |
| Msa0261090 | AT2G18260.1 | 30.328 | 244 | 146 | 5 | 14 | 235 | 61 | 302 | 1.25e-29 | 113 |
Find 62 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGAAGAATTCTCGAAAA+TGG | 0.249054 | 2_2:+59229583 | Msa0261090:CDS |
| CATTGTAACAATACCTTTCA+TGG | 0.265022 | 2_2:-59227662 | None:intergenic |
| CACTGTTTCCAGTTTCTATC+AGG | 0.281644 | 2_2:-59228711 | None:intergenic |
| CAACACGACTCTTATATATA+TGG | 0.322567 | 2_2:-59229696 | None:intergenic |
| CAATTTGTTTATCAGCATCT+TGG | 0.358355 | 2_2:-59227466 | None:intergenic |
| ATTGATCACCTGATAGAAAC+TGG | 0.373241 | 2_2:+59228703 | Msa0261090:CDS |
| CTCATCATCTGGCCTAGTTC+CGG | 0.383204 | 2_2:-59228588 | None:intergenic |
| AATGAATGAATGATTGTGTT+TGG | 0.393946 | 2_2:-59226288 | None:intergenic |
| GAAGTGCAGTTGTCCCTCTC+TGG | 0.397740 | 2_2:-59229545 | None:intergenic |
| GAGCACTGTAGAAGAAATTC+AGG | 0.406577 | 2_2:+59229184 | Msa0261090:CDS |
| ATAGTAGCTATCATAGTTGT+TGG | 0.420632 | 2_2:+59229636 | Msa0261090:CDS |
| GAAAAGGATATTGATGAAGT+TGG | 0.433278 | 2_2:+59227933 | Msa0261090:CDS |
| TCCTTGTACCATTCTAAAGC+TGG | 0.436006 | 2_2:+59229908 | Msa0261090:three_prime_UTR |
| ATCAAACTCACCTCATCATC+TGG | 0.438481 | 2_2:-59228599 | None:intergenic |
| AAAACTTCTTGATTTACATC+AGG | 0.438716 | 2_2:+59229238 | Msa0261090:CDS |
| TGATAGCTACTATTATTAAC+AGG | 0.438948 | 2_2:-59229626 | None:intergenic |
| TTGTTGGCGTTCTCAAACCT+TGG | 0.450158 | 2_2:+59229652 | Msa0261090:CDS |
| TTGTTGAGAGAGAGAGTTCG+TGG | 0.450917 | 2_2:+59226226 | Msa0261090:five_prime_UTR |
| TATATAAGAGTCGTGTTGGT+TGG | 0.462327 | 2_2:+59229701 | Msa0261090:three_prime_UTR |
| ATTCTTCAGTTACCGGAACT+AGG | 0.465753 | 2_2:+59228576 | Msa0261090:intron |
| ATATAAGAGTCGTGTTGGTT+GGG | 0.474567 | 2_2:+59229702 | Msa0261090:three_prime_UTR |
| AAGCATTTGCATGCGTCGGC+GGG | 0.475464 | 2_2:+59229726 | Msa0261090:three_prime_UTR |
| TTTAGACAACATCGAAAGCC+AGG | 0.482075 | 2_2:+59229396 | Msa0261090:CDS |
| CGCGCTACTTCAAAAGCTAA+AGG | 0.483869 | 2_2:+59227499 | Msa0261090:CDS |
| CATTCTTGCTCTGTCAATAC+CGG | 0.495403 | 2_2:-59228146 | None:intergenic |
| CAGCAGGCAATTCTTGAAGC+AGG | 0.507428 | 2_2:+59228745 | Msa0261090:CDS |
| CAAAAGCCTGGCTGTGAGAA+GGG | 0.509684 | 2_2:+59228121 | Msa0261090:CDS |
| CAACAAAACCAGCTTTAGAA+TGG | 0.512775 | 2_2:-59229916 | None:intergenic |
| TATTATTAACAGGATGATGA+TGG | 0.524137 | 2_2:-59229616 | None:intergenic |
| AAAGCATTTGCATGCGTCGG+CGG | 0.532479 | 2_2:+59229725 | Msa0261090:three_prime_UTR |
| GGGAAAGCATTTGCATGCGT+CGG | 0.535050 | 2_2:+59229722 | Msa0261090:three_prime_UTR |
| CTAAACAATAGACAAAAGCC+TGG | 0.535553 | 2_2:+59228109 | Msa0261090:CDS |
| CATATATATAAGAGTCGTGT+TGG | 0.536884 | 2_2:+59229697 | Msa0261090:three_prime_UTR |
| CTGCTTCAAGAATTGCCTGC+TGG | 0.537374 | 2_2:-59228744 | None:intergenic |
| TCTTGAAGCAGGCCGAGGAC+AGG | 0.542090 | 2_2:+59228756 | Msa0261090:CDS |
| ACAAAAGCCTGGCTGTGAGA+AGG | 0.549254 | 2_2:+59228120 | Msa0261090:CDS |
| CAGTGAGCAAATCTTCCAGC+AGG | 0.550714 | 2_2:+59228729 | Msa0261090:CDS |
| CGGCGGGAACATCTTAGAGC+AGG | 0.553663 | 2_2:+59229742 | Msa0261090:three_prime_UTR |
| ACAAAAGCATCTGCCATGAA+AGG | 0.562432 | 2_2:+59227649 | Msa0261090:CDS |
| CCGGTGCCCTTCTCACAGCC+AGG | 0.564232 | 2_2:-59228127 | None:intergenic |
| ATAAATCAAATACCTGTCCT+CGG | 0.565543 | 2_2:-59228768 | None:intergenic |
| CGGAACTAGGCCAGATGATG+AGG | 0.583696 | 2_2:+59228589 | Msa0261090:CDS |
| CCTGGCTGTGAGAAGGGCAC+CGG | 0.587319 | 2_2:+59228127 | Msa0261090:CDS |
| CTCTTATATATATGGACAAG+GGG | 0.595255 | 2_2:-59229688 | None:intergenic |
| TGCTGATAAACAAATTGAGA+AGG | 0.597365 | 2_2:+59227472 | Msa0261090:CDS |
| AATATGAACTTACAGTGAGA+AGG | 0.599086 | 2_2:-59226398 | None:intergenic |
| CAGTCGATCATGTCCAGAGA+GGG | 0.599590 | 2_2:+59229532 | Msa0261090:CDS |
| GACTCTTATATATATGGACA+AGG | 0.600124 | 2_2:-59229690 | None:intergenic |
| GCAATTCTTGAAGCAGGCCG+AGG | 0.602480 | 2_2:+59228751 | Msa0261090:CDS |
| CAACTAAGACTGCCATGTCA+AGG | 0.609214 | 2_2:-59229357 | None:intergenic |
| GGGGACTAAGAACTCTTCCA+AGG | 0.610257 | 2_2:-59229669 | None:intergenic |
| TGTTGAGAGAGAGAGTTCGT+GGG | 0.611762 | 2_2:+59226227 | Msa0261090:five_prime_UTR |
| ACCAGCTTTAGAATGGTACA+AGG | 0.615283 | 2_2:-59229909 | None:intergenic |
| TAAAGAGAGACAAAATGAGA+GGG | 0.616457 | 2_2:-59229999 | None:intergenic |
| ACTCTTATATATATGGACAA+GGG | 0.621822 | 2_2:-59229689 | None:intergenic |
| AGTTGGAAAGATTGCACATG+GGG | 0.621884 | 2_2:+59227950 | Msa0261090:CDS |
| GCAGTCTTAGTTGATGCTCA+AGG | 0.625652 | 2_2:+59229367 | Msa0261090:CDS |
| GTGTTGACTTGCTAATACAT+CGG | 0.648510 | 2_2:+59229812 | Msa0261090:three_prime_UTR |
| GAAGTTGGAAAGATTGCACA+TGG | 0.661524 | 2_2:+59227948 | Msa0261090:CDS |
| AACGACAGCGATGTTAAGCG+AGG | 0.687746 | 2_2:-59226253 | None:intergenic |
| GCAGTCGATCATGTCCAGAG+AGG | 0.713009 | 2_2:+59229531 | Msa0261090:CDS |
| AAGTTGGAAAGATTGCACAT+GGG | 0.717743 | 2_2:+59227949 | Msa0261090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTCAAAATTAAAAAATA+CGG | - | chr2_2:59228808-59228827 | None:intergenic | 10.0% |
| !! | TTCAAAATAAAAAATAATCT+TGG | - | chr2_2:59229053-59229072 | None:intergenic | 10.0% |
| !!! | AATTTTACAAATTCAAATGT+TGG | - | chr2_2:59227089-59227108 | None:intergenic | 15.0% |
| !! | AAAAATCACTTAACTATATA+CGG | - | chr2_2:59228881-59228900 | None:intergenic | 15.0% |
| !! | AAAGTTTAATTCAGAAAATT+TGG | + | chr2_2:59229146-59229165 | Msa0261090:intron | 15.0% |
| !! | AAGTTTAATTCAGAAAATTT+GGG | + | chr2_2:59229147-59229166 | Msa0261090:intron | 15.0% |
| !! | AATATTTATTTAGTTGACAA+TGG | + | chr2_2:59229288-59229307 | Msa0261090:intron | 15.0% |
| !! | ATATATATACAGAAAAATCA+AGG | - | chr2_2:59229439-59229458 | None:intergenic | 15.0% |
| !!! | TCAAAATCGAATTTTTTTCT+GGG | - | chr2_2:59226436-59226455 | None:intergenic | 20.0% |
| !!! | ATCAAAATCGAATTTTTTTC+TGG | - | chr2_2:59226437-59226456 | None:intergenic | 20.0% |
| !!! | AAAAATTCGATTTTGATTAC+TGG | + | chr2_2:59226440-59226459 | Msa0261090:intron | 20.0% |
| !!! | AAAATTCGATTTTGATTACT+GGG | + | chr2_2:59226441-59226460 | Msa0261090:intron | 20.0% |
| !!! | GAAATCAATTTTAACTTTGA+AGG | - | chr2_2:59226573-59226592 | None:intergenic | 20.0% |
| !! | ATCAAAATTAATCCCTATTT+AGG | + | chr2_2:59226604-59226623 | Msa0261090:intron | 20.0% |
| !!! | AATTCATTATGATATTGACT+TGG | + | chr2_2:59226640-59226659 | Msa0261090:intron | 20.0% |
| !!! | ATTCATTATGATATTGACTT+GGG | + | chr2_2:59226641-59226660 | Msa0261090:intron | 20.0% |
| !!! | TTTTTGTAGATCAAATTCTA+AGG | + | chr2_2:59226719-59226738 | Msa0261090:intron | 20.0% |
| !!! | TTTTTTTTTTTGTTTGTTGC+AGG | + | chr2_2:59226749-59226768 | Msa0261090:intron | 20.0% |
| !! | AAAAAAATACCAGTAAACTT+AGG | - | chr2_2:59227431-59227450 | None:intergenic | 20.0% |
| !! | TGTTATATAGATTTCGAATA+CGG | + | chr2_2:59228048-59228067 | Msa0261090:intron | 20.0% |
| !!! | TATTCATTTCTTTTCTTAGT+AGG | + | chr2_2:59228991-59229010 | Msa0261090:intron | 20.0% |
| ! | AATGAATGAATGATTGTGTT+TGG | - | chr2_2:59226291-59226310 | None:intergenic | 25.0% |
| !!! | AAAATCGAATTTTTTTCTGG+GGG | - | chr2_2:59226434-59226453 | None:intergenic | 25.0% |
| !!! | CAAAATCGAATTTTTTTCTG+GGG | - | chr2_2:59226435-59226454 | None:intergenic | 25.0% |
| ! | TTGAAAATTGAATTGAGGAA+AGG | - | chr2_2:59226477-59226496 | None:intergenic | 25.0% |
| !!! | ATTAATCCCTATTTAGGTTT+TGG | + | chr2_2:59226610-59226629 | Msa0261090:intron | 25.0% |
| !!! | TTAATCCCTATTTAGGTTTT+GGG | + | chr2_2:59226611-59226630 | Msa0261090:intron | 25.0% |
| !!! | TCTTTCTTTTTGATTTGACT+TGG | + | chr2_2:59226677-59226696 | Msa0261090:intron | 25.0% |
| !! | AATGGAAGCTTTTAATAAAC+AGG | + | chr2_2:59226866-59226885 | Msa0261090:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | - | chr2_2:59227000-59227019 | None:intergenic | 25.0% |
| ! | ATTGAATATCCTAAGTTTAC+TGG | + | chr2_2:59227419-59227438 | Msa0261090:intron | 25.0% |
| ! | GCAAAAACAAAATGGTTATA+AGG | - | chr2_2:59227566-59227585 | None:intergenic | 25.0% |
| ! | TAAGTTTGGCAAAAACAAAA+TGG | - | chr2_2:59227574-59227593 | None:intergenic | 25.0% |
| ! | TTTAGTAACGGTTATAAGTT+TGG | - | chr2_2:59227588-59227607 | None:intergenic | 25.0% |
| ! | ACGGAAAAAAAATAGTTAAC+CGG | + | chr2_2:59228067-59228086 | Msa0261090:intron | 25.0% |
| ! | AACACAGTTAACTTTATCAA+GGG | - | chr2_2:59228470-59228489 | None:intergenic | 25.0% |
| ! | TCACAAAGTTAAAAACACAA+GGG | - | chr2_2:59228544-59228563 | None:intergenic | 25.0% |
| ! | ATCACAAAGTTAAAAACACA+AGG | - | chr2_2:59228545-59228564 | None:intergenic | 25.0% |
| !!! | TGCATAAGTTTTGGTTTAAT+TGG | + | chr2_2:59228657-59228676 | Msa0261090:intron | 25.0% |
| !! | TTTTTCGTATTTTCATCTCA+TGG | + | chr2_2:59228896-59228915 | Msa0261090:intron | 25.0% |
| !! | GAAACTTCTAATTTGCATTA+CGG | - | chr2_2:59229029-59229048 | None:intergenic | 25.0% |
| ! | AAAACTTCTTGATTTACATC+AGG | + | chr2_2:59229238-59229257 | Msa0261090:CDS | 25.0% |
| ! | TATTATTAACAGGATGATGA+TGG | - | chr2_2:59229619-59229638 | None:intergenic | 25.0% |
| ! | TGATAGCTACTATTATTAAC+AGG | - | chr2_2:59229629-59229648 | None:intergenic | 25.0% |
| ! | ACTCTTATATATATGGACAA+GGG | - | chr2_2:59229692-59229711 | None:intergenic | 25.0% |
| !! | TAGCCTTAAAAAGTTTATCA+GGG | + | chr2_2:59229876-59229895 | Msa0261090:three_prime_UTR | 25.0% |
| AATATGAACTTACAGTGAGA+AGG | - | chr2_2:59226401-59226420 | None:intergenic | 30.0% | |
| !!! | AAATCGAATTTTTTTCTGGG+GGG | - | chr2_2:59226433-59226452 | None:intergenic | 30.0% |
| CTCAGTTGAAAATTGAATTG+AGG | - | chr2_2:59226482-59226501 | None:intergenic | 30.0% | |
| ! | CTCAATTCAATTTTCAACTG+AGG | + | chr2_2:59226480-59226499 | Msa0261090:intron | 30.0% |
| ! | CAATTTTACCACTATGATTC+TGG | + | chr2_2:59226522-59226541 | Msa0261090:intron | 30.0% |
| AAACACCCAAAACCTAAATA+GGG | - | chr2_2:59226619-59226638 | None:intergenic | 30.0% | |
| TAGACAAGGTGATATTGAAA+TGG | + | chr2_2:59226809-59226828 | Msa0261090:intron | 30.0% | |
| AGACAAGGTGATATTGAAAT+GGG | + | chr2_2:59226810-59226829 | Msa0261090:intron | 30.0% | |
| ! | TTAAAAGTGAGTTGAATGTG+AGG | + | chr2_2:59227117-59227136 | Msa0261090:intron | 30.0% |
| TTGAATGTAACAATCACGTT+TGG | + | chr2_2:59227188-59227207 | Msa0261090:intron | 30.0% | |
| AGAGACAAAATCAATTCCAA+TGG | + | chr2_2:59227259-59227278 | Msa0261090:intron | 30.0% | |
| CATATTTGAGTGATTTCCAT+TGG | - | chr2_2:59227278-59227297 | None:intergenic | 30.0% | |
| TTCATTATACCCTGTATGTT+TGG | - | chr2_2:59227354-59227373 | None:intergenic | 30.0% | |
| ! | CAATTTGTTTATCAGCATCT+TGG | - | chr2_2:59227469-59227488 | None:intergenic | 30.0% |
| TGCTGATAAACAAATTGAGA+AGG | + | chr2_2:59227472-59227491 | Msa0261090:CDS | 30.0% | |
| ! | GCAAAAAGTGCATTTAGTAA+CGG | - | chr2_2:59227600-59227619 | None:intergenic | 30.0% |
| !! | TTACTAAATGCACTTTTTGC+AGG | + | chr2_2:59227600-59227619 | Msa0261090:intron | 30.0% |
| CATTGTAACAATACCTTTCA+TGG | - | chr2_2:59227665-59227684 | None:intergenic | 30.0% | |
| !!! | TCATAAGATTTTGCTGTTAC+TGG | + | chr2_2:59227732-59227751 | Msa0261090:intron | 30.0% |
| AAATAGATGTGATGTCAGAA+TGG | - | chr2_2:59227846-59227865 | None:intergenic | 30.0% | |
| TATCAAAAAGAGGATGGAAA+AGG | + | chr2_2:59227917-59227936 | Msa0261090:CDS | 30.0% | |
| GAAAAGGATATTGATGAAGT+TGG | + | chr2_2:59227933-59227952 | Msa0261090:CDS | 30.0% | |
| CGGAAAAAAAATAGTTAACC+GGG | + | chr2_2:59228068-59228087 | Msa0261090:intron | 30.0% | |
| ATTCTGCATAAAACATATCC+CGG | - | chr2_2:59228089-59228108 | None:intergenic | 30.0% | |
| !! | ATCTCTGAACTTTTTAGTCA+AGG | - | chr2_2:59228266-59228285 | None:intergenic | 30.0% |
| TGAGATGATAGACATAAACT+TGG | - | chr2_2:59228347-59228366 | None:intergenic | 30.0% | |
| AATACAAGATGAATATCGTG+AGG | + | chr2_2:59228404-59228423 | Msa0261090:intron | 30.0% | |
| ACACAGTTAACTTTATCAAG+GGG | - | chr2_2:59228469-59228488 | None:intergenic | 30.0% | |
| CAACACAGTTAACTTTATCA+AGG | - | chr2_2:59228471-59228490 | None:intergenic | 30.0% | |
| AAACCAAAACTTATGCATAG+CGG | - | chr2_2:59228654-59228673 | None:intergenic | 30.0% | |
| ATAAATCAAATACCTGTCCT+CGG | - | chr2_2:59228771-59228790 | None:intergenic | 30.0% | |
| ! | CATTTCTTTTCTTAGTAGGA+AGG | + | chr2_2:59228995-59229014 | Msa0261090:intron | 30.0% |
| !!! | CAATTTGTTTTTTGCTTGTG+TGG | + | chr2_2:59229100-59229119 | Msa0261090:intron | 30.0% |
| ! | TTTTCAGATTTACCTTGACA+TGG | + | chr2_2:59229345-59229364 | Msa0261090:intron | 30.0% |
| GTTCAATTTGCGTTAATAAG+AGG | + | chr2_2:59229490-59229509 | Msa0261090:intron | 30.0% | |
| ATAGTAGCTATCATAGTTGT+TGG | + | chr2_2:59229636-59229655 | Msa0261090:CDS | 30.0% | |
| CTCTTATATATATGGACAAG+GGG | - | chr2_2:59229691-59229710 | None:intergenic | 30.0% | |
| GACTCTTATATATATGGACA+AGG | - | chr2_2:59229693-59229712 | None:intergenic | 30.0% | |
| CAACACGACTCTTATATATA+TGG | - | chr2_2:59229699-59229718 | None:intergenic | 30.0% | |
| CATATATATAAGAGTCGTGT+TGG | + | chr2_2:59229697-59229716 | Msa0261090:three_prime_UTR | 30.0% | |
| ! | GTAGCCTTAAAAAGTTTATC+AGG | + | chr2_2:59229875-59229894 | Msa0261090:three_prime_UTR | 30.0% |
| ! | AAGCCCTGATAAACTTTTTA+AGG | - | chr2_2:59229882-59229901 | None:intergenic | 30.0% |
| GAAACACCCAAAACCTAAAT+AGG | - | chr2_2:59226620-59226639 | None:intergenic | 35.0% | |
| TTTGTTAGTGAGGCTAATCA+TGG | + | chr2_2:59226777-59226796 | Msa0261090:intron | 35.0% | |
| TCAATATCACCTTGTCTAGA+AGG | - | chr2_2:59226807-59226826 | None:intergenic | 35.0% | |
| ! | TCAAAGAAGCAGTTCTGATA+TGG | + | chr2_2:59226842-59226861 | Msa0261090:intron | 35.0% |
| ! | CAAAGAAGCAGTTCTGATAT+GGG | + | chr2_2:59226843-59226862 | Msa0261090:intron | 35.0% |
| GTATAGATACACCTCAGATT+AGG | + | chr2_2:59226933-59226952 | Msa0261090:intron | 35.0% | |
| TAAAGTTAACTGTGTGTGTC+TGG | + | chr2_2:59227299-59227318 | Msa0261090:intron | 35.0% | |
| ! | TGTATGTTTGGTTTCACAGT+AGG | - | chr2_2:59227342-59227361 | None:intergenic | 35.0% |
| TACTGTGAAACCAAACATAC+AGG | + | chr2_2:59227341-59227360 | Msa0261090:intron | 35.0% | |
| ACTGTGAAACCAAACATACA+GGG | + | chr2_2:59227342-59227361 | Msa0261090:intron | 35.0% | |
| ATGTGATGTCAGAATGGAAA+AGG | - | chr2_2:59227840-59227859 | None:intergenic | 35.0% | |
| ATAGCTGAGAATGATGTAAG+AGG | - | chr2_2:59227900-59227919 | None:intergenic | 35.0% | |
| CATTCTCAGCTATCAAAAAG+AGG | + | chr2_2:59227907-59227926 | Msa0261090:intron | 35.0% | |
| AAGTTGGAAAGATTGCACAT+GGG | + | chr2_2:59227949-59227968 | Msa0261090:CDS | 35.0% | |
| CTAAACAATAGACAAAAGCC+TGG | + | chr2_2:59228109-59228128 | Msa0261090:CDS | 35.0% | |
| GAAAAACAGCTTCTAGTGTT+AGG | - | chr2_2:59228325-59228344 | None:intergenic | 35.0% | |
| GTGGAAAGAAGAGTTATTAC+AGG | + | chr2_2:59228429-59228448 | Msa0261090:intron | 35.0% | |
| AAGTTAACTGTGTTGCACTA+TGG | + | chr2_2:59228476-59228495 | Msa0261090:intron | 35.0% | |
| TGACTTGATTCTTCAGTTAC+CGG | + | chr2_2:59228569-59228588 | Msa0261090:intron | 35.0% | |
| ! | TATCCGCTATGCATAAGTTT+TGG | + | chr2_2:59228648-59228667 | Msa0261090:intron | 35.0% |
| ATTGATCACCTGATAGAAAC+TGG | + | chr2_2:59228703-59228722 | Msa0261090:CDS | 35.0% | |
| !! | GTGTTGTTTCTTGAGCTTAA+AGG | + | chr2_2:59228951-59228970 | Msa0261090:intron | 35.0% |
| ! | TTGTTTCTTGAGCTTAAAGG+AGG | + | chr2_2:59228954-59228973 | Msa0261090:intron | 35.0% |
| TCCAGAAGAATTCTCGAAAA+TGG | + | chr2_2:59229583-59229602 | Msa0261090:CDS | 35.0% | |
| !! | TCCATTTTCGAGAATTCTTC+TGG | - | chr2_2:59229587-59229606 | None:intergenic | 35.0% |
| ! | TATATAAGAGTCGTGTTGGT+TGG | + | chr2_2:59229701-59229720 | Msa0261090:three_prime_UTR | 35.0% |
| !! | ATATAAGAGTCGTGTTGGTT+GGG | + | chr2_2:59229702-59229721 | Msa0261090:three_prime_UTR | 35.0% |
| !! | GTGTTGACTTGCTAATACAT+CGG | + | chr2_2:59229812-59229831 | Msa0261090:three_prime_UTR | 35.0% |
| !! | CAACAAAACCAGCTTTAGAA+TGG | - | chr2_2:59229919-59229938 | None:intergenic | 35.0% |
| GAGAGAGAGAGAGAGTAAAA+CGG | - | chr2_2:59226318-59226337 | None:intergenic | 40.0% | |
| TGATTGCACCAGAATCATAG+TGG | - | chr2_2:59226533-59226552 | None:intergenic | 40.0% | |
| ! | GCAGGATTCATTTGTTAGTG+AGG | + | chr2_2:59226767-59226786 | Msa0261090:intron | 40.0% |
| ! | AAGCAGTTCTGATATGGGAA+TGG | + | chr2_2:59226848-59226867 | Msa0261090:intron | 40.0% |
| ! | AAAGTGAGTTGAATGTGAGG+TGG | + | chr2_2:59227120-59227139 | Msa0261090:intron | 40.0% |
| ! | ATGTTTGGTTTCACAGTAGG+AGG | - | chr2_2:59227339-59227358 | None:intergenic | 40.0% |
| !!! | CTTTAGCTTTTGAAGTAGCG+CGG | - | chr2_2:59227501-59227520 | None:intergenic | 40.0% |
| ! | CTTTTTGCAGGAAGCTAATG+AGG | + | chr2_2:59227612-59227631 | Msa0261090:intron | 40.0% |
| !! | ACAAAAGCATCTGCCATGAA+AGG | + | chr2_2:59227649-59227668 | Msa0261090:CDS | 40.0% |
| ! | CTGTTACTGGTTACTGAATC+AGG | + | chr2_2:59227745-59227764 | Msa0261090:intron | 40.0% |
| CTCAGCTATCAAAAAGAGGA+TGG | + | chr2_2:59227911-59227930 | Msa0261090:intron | 40.0% | |
| GAAGTTGGAAAGATTGCACA+TGG | + | chr2_2:59227948-59227967 | Msa0261090:CDS | 40.0% | |
| AGTTGGAAAGATTGCACATG+GGG | + | chr2_2:59227950-59227969 | Msa0261090:CDS | 40.0% | |
| CATTCTTGCTCTGTCAATAC+CGG | - | chr2_2:59228149-59228168 | None:intergenic | 40.0% | |
| GTCAAGGAACTGCAATTTCA+AGG | - | chr2_2:59228250-59228269 | None:intergenic | 40.0% | |
| GTGTTTCAGACTAACATACC+TGG | - | chr2_2:59228303-59228322 | None:intergenic | 40.0% | |
| AGATGAATATCGTGAGGTTG+TGG | + | chr2_2:59228410-59228429 | Msa0261090:intron | 40.0% | |
| ATTCTTCAGTTACCGGAACT+AGG | + | chr2_2:59228576-59228595 | Msa0261090:intron | 40.0% | |
| ATCAAACTCACCTCATCATC+TGG | - | chr2_2:59228602-59228621 | None:intergenic | 40.0% | |
| CACTGTTTCCAGTTTCTATC+AGG | - | chr2_2:59228714-59228733 | None:intergenic | 40.0% | |
| TCATCTCATGGACGAGATAT+TGG | + | chr2_2:59228908-59228927 | Msa0261090:intron | 40.0% | |
| !! | CAGAAAATTTGGGTTGTTGC+AGG | + | chr2_2:59229157-59229176 | Msa0261090:intron | 40.0% |
| ! | GAGCACTGTAGAAGAAATTC+AGG | + | chr2_2:59229184-59229203 | Msa0261090:CDS | 40.0% |
| TTTAGACAACATCGAAAGCC+AGG | + | chr2_2:59229396-59229415 | Msa0261090:CDS | 40.0% | |
| ! | CGTTAATAAGAGGCTTGTTC+AGG | + | chr2_2:59229500-59229519 | Msa0261090:intron | 40.0% |
| !! | TCCTTGTACCATTCTAAAGC+TGG | + | chr2_2:59229908-59229927 | Msa0261090:three_prime_UTR | 40.0% |
| !! | ACCAGCTTTAGAATGGTACA+AGG | - | chr2_2:59229912-59229931 | None:intergenic | 40.0% |
| TTGTTGAGAGAGAGAGTTCG+TGG | + | chr2_2:59226226-59226245 | Msa0261090:five_prime_UTR | 45.0% | |
| TGTTGAGAGAGAGAGTTCGT+GGG | + | chr2_2:59226227-59226246 | Msa0261090:five_prime_UTR | 45.0% | |
| CATGGACAACCTTCTAGACA+AGG | + | chr2_2:59226795-59226814 | Msa0261090:intron | 45.0% | |
| ! | ATATGTGTCGGTGTCTTCGT+CGG | - | chr2_2:59226988-59227007 | None:intergenic | 45.0% |
| CGCGCTACTTCAAAAGCTAA+AGG | + | chr2_2:59227499-59227518 | Msa0261090:CDS | 45.0% | |
| AGATCTCATGACAGAGTTCC+AGG | + | chr2_2:59228282-59228301 | Msa0261090:intron | 45.0% | |
| TCATGGACGAGATATTGGTG+TGG | + | chr2_2:59228913-59228932 | Msa0261090:intron | 45.0% | |
| CAACTAAGACTGCCATGTCA+AGG | - | chr2_2:59229360-59229379 | None:intergenic | 45.0% | |
| ! | GCAGTCTTAGTTGATGCTCA+AGG | + | chr2_2:59229367-59229386 | Msa0261090:CDS | 45.0% |
| TTGTTGGCGTTCTCAAACCT+TGG | + | chr2_2:59229652-59229671 | Msa0261090:CDS | 45.0% | |
| !!! | TTATTTATTTAAAAAGTATA+TGG | + | chr2_2:59228510-59228529 | Msa0261090:intron | 5.0% |
| AACGACAGCGATGTTAAGCG+AGG | - | chr2_2:59226256-59226275 | None:intergenic | 50.0% | |
| CATGATAGGTATCCGACACC+AGG | - | chr2_2:59226964-59226983 | None:intergenic | 50.0% | |
| GTGTCTTCGTCGGACATGAT+AGG | - | chr2_2:59226978-59226997 | None:intergenic | 50.0% | |
| TGTTCGTGTCTGTGCTGCAT+AGG | + | chr2_2:59227056-59227075 | Msa0261090:intron | 50.0% | |
| ACAAAAGCCTGGCTGTGAGA+AGG | + | chr2_2:59228120-59228139 | Msa0261090:CDS | 50.0% | |
| CAAAAGCCTGGCTGTGAGAA+GGG | + | chr2_2:59228121-59228140 | Msa0261090:CDS | 50.0% | |
| CTCATCATCTGGCCTAGTTC+CGG | - | chr2_2:59228591-59228610 | None:intergenic | 50.0% | |
| CAGTGAGCAAATCTTCCAGC+AGG | + | chr2_2:59228729-59228748 | Msa0261090:CDS | 50.0% | |
| CTGCTTCAAGAATTGCCTGC+TGG | - | chr2_2:59228747-59228766 | None:intergenic | 50.0% | |
| CAGCAGGCAATTCTTGAAGC+AGG | + | chr2_2:59228745-59228764 | Msa0261090:CDS | 50.0% | |
| CGAGATATTGGTGTGGTGAG+CGG | + | chr2_2:59228920-59228939 | Msa0261090:intron | 50.0% | |
| GATGAGCGAAGACACAAACC+TGG | - | chr2_2:59229417-59229436 | None:intergenic | 50.0% | |
| CAGTCGATCATGTCCAGAGA+GGG | + | chr2_2:59229532-59229551 | Msa0261090:CDS | 50.0% | |
| GGGGACTAAGAACTCTTCCA+AGG | - | chr2_2:59229672-59229691 | None:intergenic | 50.0% | |
| !! | GGGAAAGCATTTGCATGCGT+CGG | + | chr2_2:59229722-59229741 | Msa0261090:three_prime_UTR | 50.0% |
| ! | AAAGCATTTGCATGCGTCGG+CGG | + | chr2_2:59229725-59229744 | Msa0261090:three_prime_UTR | 50.0% |
| ACCTCAGATTAGGCGTGTCC+TGG | + | chr2_2:59226943-59226962 | Msa0261090:intron | 55.0% | |
| ACCAGGACACGCCTAATCTG+AGG | - | chr2_2:59226947-59226966 | None:intergenic | 55.0% | |
| GATTAGGCGTGTCCTGGTGT+CGG | + | chr2_2:59226949-59226968 | Msa0261090:intron | 55.0% | |
| CGGAACTAGGCCAGATGATG+AGG | + | chr2_2:59228589-59228608 | Msa0261090:CDS | 55.0% | |
| GCAATTCTTGAAGCAGGCCG+AGG | + | chr2_2:59228751-59228770 | Msa0261090:CDS | 55.0% | |
| GCAGTCGATCATGTCCAGAG+AGG | + | chr2_2:59229531-59229550 | Msa0261090:CDS | 55.0% | |
| GAAGTGCAGTTGTCCCTCTC+TGG | - | chr2_2:59229548-59229567 | None:intergenic | 55.0% | |
| ! | AAGCATTTGCATGCGTCGGC+GGG | + | chr2_2:59229726-59229745 | Msa0261090:three_prime_UTR | 55.0% |
| TCTTGAAGCAGGCCGAGGAC+AGG | + | chr2_2:59228756-59228775 | Msa0261090:CDS | 60.0% | |
| CGGCGGGAACATCTTAGAGC+AGG | + | chr2_2:59229742-59229761 | Msa0261090:three_prime_UTR | 60.0% | |
| ! | CCTGGCTGTGAGAAGGGCAC+CGG | + | chr2_2:59228127-59228146 | Msa0261090:CDS | 65.0% |
| CCGGTGCCCTTCTCACAGCC+AGG | - | chr2_2:59228130-59228149 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 59226205 | 59230006 | 59226205 | ID=Msa0261090;Name=Msa0261090 |
| chr2_2 | mRNA | 59226205 | 59230006 | 59226205 | ID=Msa0261090-mRNA-1;Parent=Msa0261090;Name=Msa0261090-mRNA-1;_AED=0.19;_eAED=0.19;_QI=159|0.72|0.91|1|0.63|0.75|12|320|241 |
| chr2_2 | exon | 59226205 | 59226338 | 59226205 | ID=Msa0261090-mRNA-1:exon:18267;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59226365 | 59226407 | 59226365 | ID=Msa0261090-mRNA-1:exon:18268;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59227464 | 59227520 | 59227464 | ID=Msa0261090-mRNA-1:exon:18269;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59227622 | 59227670 | 59227622 | ID=Msa0261090-mRNA-1:exon:18270;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59227916 | 59228004 | 59227916 | ID=Msa0261090-mRNA-1:exon:18271;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59228106 | 59228179 | 59228106 | ID=Msa0261090-mRNA-1:exon:18272;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59228502 | 59228524 | 59228502 | ID=Msa0261090-mRNA-1:exon:18273;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59228585 | 59228610 | 59228585 | ID=Msa0261090-mRNA-1:exon:18274;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59228700 | 59228777 | 59228700 | ID=Msa0261090-mRNA-1:exon:18275;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59229179 | 59229259 | 59229179 | ID=Msa0261090-mRNA-1:exon:18276;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59229352 | 59229417 | 59229352 | ID=Msa0261090-mRNA-1:exon:18277;Parent=Msa0261090-mRNA-1 |
| chr2_2 | exon | 59229522 | 59230006 | 59229522 | ID=Msa0261090-mRNA-1:exon:18278;Parent=Msa0261090-mRNA-1 |
| chr2_2 | five_prime_UTR | 59226205 | 59226338 | 59226205 | ID=Msa0261090-mRNA-1:five_prime_utr;Parent=Msa0261090-mRNA-1 |
| chr2_2 | five_prime_UTR | 59226365 | 59226389 | 59226365 | ID=Msa0261090-mRNA-1:five_prime_utr;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59226390 | 59226407 | 59226390 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59227464 | 59227520 | 59227464 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59227622 | 59227670 | 59227622 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59227916 | 59228004 | 59227916 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59228106 | 59228179 | 59228106 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59228502 | 59228524 | 59228502 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59228585 | 59228610 | 59228585 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59228700 | 59228777 | 59228700 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59229179 | 59229259 | 59229179 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59229352 | 59229417 | 59229352 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | CDS | 59229522 | 59229686 | 59229522 | ID=Msa0261090-mRNA-1:cds;Parent=Msa0261090-mRNA-1 |
| chr2_2 | three_prime_UTR | 59229687 | 59230006 | 59229687 | ID=Msa0261090-mRNA-1:three_prime_utr;Parent=Msa0261090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
