AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0760180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760180 MtrunA17_Chr5g0408971 85.789 380 34 2 1 374 1 366 0.0 650
Msa0760180 MtrunA17_Chr3g0145091 44.529 393 175 11 1 374 1 369 1.18e-87 269
Msa0760180 MtrunA17_Chr4g0035851 42.857 392 184 11 1 374 1 370 6.87e-80 249
Msa0760180 MtrunA17_Chr8g0380121 34.908 381 201 9 1 372 1 343 1.60e-68 219
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760180 AT4G34660.1 42.821 390 183 10 1 374 1 366 1.02e-88 272
Msa0760180 AT4G34660.2 41.026 390 167 11 1 374 1 343 6.96e-80 249
Msa0760180 AT4G34660.3 39.474 380 159 6 1 374 1 315 8.32e-77 240
Msa0760180 AT4G18060.1 37.135 377 193 9 1 368 1 342 1.52e-75 238
Msa0760180 AT1G31440.1 44.300 307 151 5 1 297 1 297 9.05e-72 231
Msa0760180 AT1G31440.1 57.009 107 42 1 272 374 327 433 4.26e-33 128
Msa0760180 AT4G39020.1 45.055 91 49 1 284 374 78 167 1.05e-18 83.2

Find 103 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCAATCACATGATATTA+TGG 0.226560 5_2:+16555681 None:intergenic
GGATTAACTTTCTCATTTGC+AGG 0.288088 5_2:+16556834 None:intergenic
GAGACTTTGCTTGGGATCTT+AGG 0.291927 5_2:-16558565 Msa0760180:CDS
GGTTGATTATGTTCCTCTTT+TGG 0.303218 5_2:+16556855 None:intergenic
CGGTAACTCATACGATATAT+TGG 0.313275 5_2:-16558599 Msa0760180:CDS
GCTAAGGACTGTTGTAAGTA+TGG 0.317953 5_2:-16558679 Msa0760180:CDS
ACAGACCATTCTATATAATA+TGG 0.328812 5_2:+16555500 None:intergenic
GCATAACTTTGATGTTATTC+CGG 0.330937 5_2:+16555777 None:intergenic
TTTGATTTGCTTAAGCCCTT+AGG 0.379562 5_2:-16555561 Msa0760180:three_prime_UTR
GCTTGGGATCTTAGGTGATC+AGG 0.383065 5_2:-16558557 Msa0760180:intron
TGTTTATAACGAATGCCATT+TGG 0.388959 5_2:+16556813 None:intergenic
GTTAGAAACTTCTCGCTCTC+TGG 0.393392 5_2:-16560164 Msa0760180:five_prime_UTR
TAAGCCCTTAGGGTTATCTA+AGG 0.400401 5_2:-16555550 Msa0760180:three_prime_UTR
GTCAAGCTCGTGTCCGTGTC+TGG 0.400581 5_2:-16560298 Msa0760180:five_prime_UTR
AAGTTTCTAACGGAAGAAAA+AGG 0.404532 5_2:+16560176 None:intergenic
TATTCTCATAATCACGGATT+AGG 0.405195 5_2:-16555716 Msa0760180:three_prime_UTR
GATCACTACCTGTTGTTGTT+TGG 0.414946 5_2:+16559941 None:intergenic
GCAAGTGCTTCTCTTCAATT+CGG 0.418266 5_2:-16558619 Msa0760180:CDS
GGAGAATTCAATGGCAATGC+TGG 0.418558 5_2:-16555855 Msa0760180:CDS
TTGATTTGCTTAAGCCCTTA+GGG 0.420745 5_2:-16555560 Msa0760180:three_prime_UTR
TATAAACATAACACCCAAAT+GGG 0.436203 5_2:-16556798 Msa0760180:CDS
GGGTGAATGTTATTGTTGAT+TGG 0.437946 5_2:+16558298 None:intergenic
CGATTATGTTGTAGTCCGTC+AGG 0.438244 5_2:-16556212 Msa0760180:intron
TTCTGCATTCTGAAGCCTCA+TGG 0.443561 5_2:+16558098 None:intergenic
TTATAAACATAACACCCAAA+TGG 0.448386 5_2:-16556799 Msa0760180:CDS
CATATCGTTCGGGGCGTTGA+AGG 0.452090 5_2:-16558838 Msa0760180:CDS
TTCTGTTAGTTCCAAGCAGA+TGG 0.454303 5_2:-16558809 Msa0760180:CDS
CCTTCAGCTTGAGCATCAAA+TGG 0.458512 5_2:+16556256 None:intergenic
AATGAGAAAGTTAATCCAAA+TGG 0.467279 5_2:-16556828 Msa0760180:CDS
ATCATTTCCACTGCCAAAAG+AGG 0.468115 5_2:-16556868 Msa0760180:CDS
CAGTCTATACTTAGACAGTT+GGG 0.468435 5_2:-16559058 Msa0760180:CDS
ATACCATTGTAGAAAGGCTC+TGG 0.470481 5_2:+16557977 None:intergenic
AGTTCCAAGCAGATGGAGAT+AGG 0.472353 5_2:-16558802 Msa0760180:intron
GGAAGCAAGCTAGTAGATTG+AGG 0.473119 5_2:-16559974 Msa0760180:CDS
AATGAAAGGGAGACTTTGCT+TGG 0.475575 5_2:-16558574 Msa0760180:CDS
ACAAGTTGCCAAACAACAAC+AGG 0.480217 5_2:-16559949 Msa0760180:intron
AATGTCCATATTATATAGAA+TGG 0.488035 5_2:-16555505 Msa0760180:three_prime_UTR
TATTCCGGTATCTTGTTCGC+TGG 0.489472 5_2:+16555792 None:intergenic
GCAGTCTATACTTAGACAGT+TGG 0.490454 5_2:-16559059 Msa0760180:intron
CCATTTGATGCTCAAGCTGA+AGG 0.493578 5_2:-16556256 Msa0760180:CDS
AAACTTCGTCAAGAAGTAGA+AGG 0.493785 5_2:-16558264 Msa0760180:CDS
GAGGCGTCGATCAAAGTTGA+GGG 0.496376 5_2:-16558145 Msa0760180:CDS
AATTTCCAGGTTGCTGCCAA+TGG 0.498806 5_2:-16555888 Msa0760180:intron
GTCACCTATCTCCATCTGCT+TGG 0.502296 5_2:+16558798 None:intergenic
GACGAAGTTTGTCGTAGTTG+TGG 0.502788 5_2:+16558277 None:intergenic
TGAGCGGTTCATTGCTAAGT+TGG 0.503839 5_2:+16559035 None:intergenic
ACGATATATTGGAAAATGAA+AGG 0.504543 5_2:-16558588 Msa0760180:CDS
ACGAAGTTTGTCGTAGTTGT+GGG 0.505034 5_2:+16558278 None:intergenic
TTAGCTATACCATTGTAGAA+AGG 0.507899 5_2:+16557971 None:intergenic
TCGTCAAGAAGTAGAAGGCC+AGG 0.512767 5_2:-16558259 Msa0760180:CDS
ATGAAAGGGAGACTTTGCTT+GGG 0.515856 5_2:-16558573 Msa0760180:CDS
CGATATATTGGAAAATGAAA+GGG 0.517703 5_2:-16558587 Msa0760180:CDS
AAATCTGCCCTTGTGGCACT+TGG 0.518166 5_2:-16558057 Msa0760180:CDS
GAAGCAAGCTAGTAGATTGA+GGG 0.520089 5_2:-16559973 Msa0760180:CDS
CTGCCACAATGGCATGCATA+TGG 0.523066 5_2:-16558226 Msa0760180:CDS
TCCAGGTTGCTGCCAATGGA+TGG 0.529779 5_2:-16555884 Msa0760180:intron
ACTTAGCAATGAACCGCTCA+TGG 0.537092 5_2:-16559032 Msa0760180:CDS
CTCGCTCTCTGGAAAGTCCC+AGG 0.540030 5_2:-16560153 Msa0760180:intron
TTGAAGAGAAGCACTTGCAA+GGG 0.540806 5_2:+16558624 None:intergenic
CTCTGCTTATGTACAGAGAC+AGG 0.541764 5_2:-16555823 Msa0760180:CDS
TGCTGCTATGTCGTCAGTTG+AGG 0.543649 5_2:-16558022 Msa0760180:CDS
CTAAGGACTGTTGTAAGTAT+GGG 0.544371 5_2:-16558678 Msa0760180:CDS
GTATACTTCAGTGAGGAAGT+TGG 0.546550 5_2:-16558701 Msa0760180:intron
CCTAATCAAAAGACCAATGT+TGG 0.550105 5_2:+16555755 None:intergenic
ATTGAAGAGAAGCACTTGCA+AGG 0.556652 5_2:+16558623 None:intergenic
AAGTTCCTTAGATAACCCTA+AGG 0.557549 5_2:+16555545 None:intergenic
TTCAGTGAGGAAGTTGGCTA+AGG 0.558875 5_2:-16558695 Msa0760180:intron
TTCTCCTTCAGACCATCCAT+TGG 0.561878 5_2:+16555872 None:intergenic
CATTTGATGCTCAAGCTGAA+GGG 0.565005 5_2:-16556255 Msa0760180:CDS
CCACCATATGCATGCCATTG+TGG 0.569659 5_2:+16558223 None:intergenic
TGAGGCGTCGATCAAAGTTG+AGG 0.570936 5_2:-16558146 Msa0760180:CDS
CTAGAATAACAAGGGCATGC+CGG 0.575931 5_2:+16557108 None:intergenic
CTTCTCTACCAAGTGCCACA+AGG 0.578531 5_2:+16558049 None:intergenic
CATCAAAGTTATGCCAACAT+TGG 0.578617 5_2:-16555768 Msa0760180:three_prime_UTR
TTTCAGCGGCATATCGTTCG+GGG 0.580469 5_2:-16558847 Msa0760180:CDS
TGGTCTGAAGGAGAATTCAA+TGG 0.582228 5_2:-16555864 Msa0760180:CDS
AATTCAATGGCAATGCTGGA+TGG 0.583292 5_2:-16555851 Msa0760180:CDS
ATTTGATGCTCAAGCTGAAG+GGG 0.584498 5_2:-16556254 Msa0760180:CDS
CACTTCTACAAAGACTGCTA+AGG 0.584795 5_2:-16558963 Msa0760180:intron
AGTACCAGCGAACAAGATAC+CGG 0.589399 5_2:-16555796 Msa0760180:CDS
ACTGTATATTCTCATAATCA+CGG 0.593578 5_2:-16555722 Msa0760180:three_prime_UTR
GCTGCCAATGGATGGTCTGA+AGG 0.596789 5_2:-16555876 Msa0760180:CDS
TCTAGATAAACTACATGCTG+AGG 0.597051 5_2:-16557090 Msa0760180:intron
AGAGAGCGAGAAGTTTCTAA+CGG 0.603263 5_2:+16560166 None:intergenic
TCTCCAGAGCCTTTCTACAA+TGG 0.606321 5_2:-16557980 Msa0760180:intron
TTCTCTACCAAGTGCCACAA+GGG 0.615566 5_2:+16558050 None:intergenic
TGTAATTCTAAATGAAAACA+TGG 0.617627 5_2:-16555480 Msa0760180:three_prime_UTR
CTGTCTCTGTACATAAGCAG+AGG 0.628802 5_2:+16555824 None:intergenic
AGTTCCTTAGATAACCCTAA+GGG 0.632998 5_2:+16555546 None:intergenic
GTAGTAATTTACTGCCACAA+TGG 0.633358 5_2:-16558237 Msa0760180:CDS
AGAGCATAAATCTGCCCTTG+TGG 0.636988 5_2:-16558064 Msa0760180:CDS
TTTGAGAGTAGCACCAGACA+CGG 0.640529 5_2:+16560285 None:intergenic
TGAAGAGAAGCACTTGCAAG+GGG 0.649136 5_2:+16558625 None:intergenic
TGTGGCAGTAAATTACTACC+TGG 0.653030 5_2:+16558241 None:intergenic
TCAGATTCATCAGCCATGAG+CGG 0.654677 5_2:+16559019 None:intergenic
GTAGTTTATCTAGAATAACA+AGG 0.660690 5_2:+16557099 None:intergenic
TGTCTCTGTACATAAGCAGA+GGG 0.668894 5_2:+16555825 None:intergenic
GGAAATGATGTAGAGTCTTG+TGG 0.677018 5_2:+16556882 None:intergenic
TAGTTTATCTAGAATAACAA+GGG 0.682515 5_2:+16557100 None:intergenic
CCACAATGGCATGCATATGG+TGG 0.703096 5_2:-16558223 Msa0760180:CDS
TTTCTGCAGAGAGTTCCATG+AGG 0.703430 5_2:-16558113 Msa0760180:CDS
GAAGAGAAGCACTTGCAAGG+GGG 0.737031 5_2:+16558626 None:intergenic
GGGACTGAGAATGACAACCA+AGG 0.745093 5_2:-16558658 Msa0760180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTGTAAAAAGAAAAA+TGG - chr5_2:16555733-16555752 Msa0760180:three_prime_UTR 10.0%
!!! AATTAAATCAAAATCAATTT+TGG - chr5_2:16556183-16556202 Msa0760180:intron 10.0%
!! AATATATTAACAAAGTAAAA+TGG + chr5_2:16558062-16558081 None:intergenic 10.0%
!!! AAATTCATAATTTTTTAATG+AGG - chr5_2:16558443-16558462 Msa0760180:intron 10.0%
!!! AATAATTTTTTTTTTGTTTG+GGG + chr5_2:16558555-16558574 None:intergenic 10.0%
!!! ATTTTATTGCTTATATAAAT+TGG + chr5_2:16559221-16559240 None:intergenic 10.0%
!! AATATCATTATTAATATTTG+CGG - chr5_2:16559749-16559768 Msa0760180:intron 10.0%
!!! GATTTTGATTTAATTGATTT+TGG + chr5_2:16556178-16556197 None:intergenic 15.0%
!!! TGATAACATCATATATTTTA+CGG + chr5_2:16557287-16557306 None:intergenic 15.0%
!! TATCTAATTAAATGTTTGTT+TGG - chr5_2:16558466-16558485 Msa0760180:intron 15.0%
!!! ATAATTTTTTTTTTGTTTGG+GGG + chr5_2:16558554-16558573 None:intergenic 15.0%
!!! TGATTCTATAAAGTTGATTT+GGG + chr5_2:16556456-16556475 None:intergenic 20.0%
!!! TTGATTCTATAAAGTTGATT+TGG + chr5_2:16556457-16556476 None:intergenic 20.0%
!! CTTAATAACTAACTGATAAA+TGG + chr5_2:16556820-16556839 None:intergenic 20.0%
!! TTGAAGATGTAAATATTTGT+TGG - chr5_2:16558152-16558171 Msa0760180:CDS 20.0%
!!! TAGTTTATCTAGAATAACAA+GGG + chr5_2:16558642-16558661 None:intergenic 20.0%
!! TTCCAATTTGAAAGAATTAT+TGG + chr5_2:16558690-16558709 None:intergenic 20.0%
!! AGATCAACATTAAAAAGAAA+TGG + chr5_2:16559147-16559166 None:intergenic 20.0%
!! TCATAAAATAAGACAAATCT+TGG - chr5_2:16559335-16559354 Msa0760180:intron 20.0%
!!! TTGAACTTCTTAAGTAATTT+TGG - chr5_2:16559583-16559602 Msa0760180:intron 20.0%
!!! TTGCATTTTTATTTTCCTTT+TGG - chr5_2:16559822-16559841 Msa0760180:intron 20.0%
!! AATGTCCATATTATATAGAA+TGG - chr5_2:16560234-16560253 Msa0760180:five_prime_UTR 20.0%
!! TGTAATTCTAAATGAAAACA+TGG - chr5_2:16560259-16560278 Msa0760180:five_prime_UTR 20.0%
!! GGAAGAAAAAGGTATAATAA+TGG + chr5_2:16555555-16555574 None:intergenic 25.0%
! AAAAGTAAGAGAACAAATGA+AGG + chr5_2:16555638-16555657 None:intergenic 25.0%
! AAAGAAAAATGGATGCTATA+AGG - chr5_2:16555744-16555763 Msa0760180:three_prime_UTR 25.0%
!! ATTTTGCACTAGTACTATTT+AGG - chr5_2:16555842-16555861 Msa0760180:CDS 25.0%
! AAACAAGCTTATTGTATGTT+TGG - chr5_2:16555915-16555934 Msa0760180:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG - chr5_2:16555983-16556002 Msa0760180:intron 25.0%
! ATGTGAAAGTCATTTATGTT+CGG + chr5_2:16556140-16556159 None:intergenic 25.0%
! TTACTTCATGATTGAACTTA+TGG - chr5_2:16556533-16556552 Msa0760180:intron 25.0%
! GCATAAACAAAACTAATGAT+AGG + chr5_2:16556985-16557004 None:intergenic 25.0%
!!! TTAGTTTTGTTTATGCTTCA+AGG - chr5_2:16556989-16557008 Msa0760180:intron 25.0%
! ACAAAACATCAATCAATTAC+TGG + chr5_2:16557015-16557034 None:intergenic 25.0%
! ACGATATATTGGAAAATGAA+AGG - chr5_2:16557151-16557170 Msa0760180:intron 25.0%
! CGATATATTGGAAAATGAAA+GGG - chr5_2:16557152-16557171 Msa0760180:intron 25.0%
!! GTAGTTTATCTAGAATAACA+AGG + chr5_2:16558643-16558662 None:intergenic 25.0%
! CAATTTGAAAGAATTATTGG+TGG + chr5_2:16558687-16558706 None:intergenic 25.0%
! CACCAATAATTCTTTCAAAT+TGG - chr5_2:16558685-16558704 Msa0760180:CDS 25.0%
! AATGAGAAAGTTAATCCAAA+TGG - chr5_2:16558911-16558930 Msa0760180:intron 25.0%
! TTATAAACATAACACCCAAA+TGG - chr5_2:16558940-16558959 Msa0760180:intron 25.0%
! TATAAACATAACACCCAAAT+GGG - chr5_2:16558941-16558960 Msa0760180:intron 25.0%
! ATATGGTTGTAATGTAATGT+AGG + chr5_2:16559027-16559046 None:intergenic 25.0%
! CAAAGCTAAATCATTTGAAT+AGG + chr5_2:16559080-16559099 None:intergenic 25.0%
!! CTATTCAAATGATTTAGCTT+TGG - chr5_2:16559078-16559097 Msa0760180:intron 25.0%
! ATGTAGATAAAATATTGCAC+TGG + chr5_2:16559415-16559434 None:intergenic 25.0%
! AAATCAACAGTAACTCTATT+TGG + chr5_2:16559661-16559680 None:intergenic 25.0%
! TTATTAATATTTGCGGAAGT+TGG - chr5_2:16559756-16559775 Msa0760180:intron 25.0%
!!! CATTTTTATTTTCCTTTTGG+TGG - chr5_2:16559825-16559844 Msa0760180:intron 25.0%
! ACTGTATATTCTCATAATCA+CGG - chr5_2:16560017-16560036 Msa0760180:intron 25.0%
! ATTGCAATCACATGATATTA+TGG + chr5_2:16560061-16560080 None:intergenic 25.0%
!!! CATGTGATTGCAATTTTTTT+TGG - chr5_2:16560067-16560086 Msa0760180:intron 25.0%
!!! TGATTGCAATTTTTTTTGGA+TGG - chr5_2:16560071-16560090 Msa0760180:intron 25.0%
! ACAGACCATTCTATATAATA+TGG + chr5_2:16560242-16560261 None:intergenic 25.0%
AAGTTTCTAACGGAAGAAAA+AGG + chr5_2:16555566-16555585 None:intergenic 30.0%
ACTAAGAATACCTTATACCT+GGG + chr5_2:16555606-16555625 None:intergenic 30.0%
AACTAAGAATACCTTATACC+TGG + chr5_2:16555607-16555626 None:intergenic 30.0%
TGATCAGAAAAAGATTGAGT+TGG + chr5_2:16555670-16555689 None:intergenic 30.0%
! CTTTTCTTTGTAGTAGAGAA+AGG + chr5_2:16555701-16555720 None:intergenic 30.0%
TTTGCCTCTTCAAAAAAAAG+TGG + chr5_2:16555943-16555962 None:intergenic 30.0%
AAGCTAAAAATCAACTCTAG+AGG + chr5_2:16556079-16556098 None:intergenic 30.0%
!!! CTAGAGTTGATTTTTAGCTT+TGG - chr5_2:16556079-16556098 Msa0760180:intron 30.0%
AAAAACACTAAGCAAGTGTT+CGG + chr5_2:16556220-16556239 None:intergenic 30.0%
!!! AACACTTGCTTAGTGTTTTT+TGG - chr5_2:16556220-16556239 Msa0760180:CDS 30.0%
! CAATTTTGTCTCTTCCAAAA+TGG + chr5_2:16556248-16556267 None:intergenic 30.0%
!! CATTTTGGAAGAGACAAAAT+TGG - chr5_2:16556246-16556265 Msa0760180:CDS 30.0%
AGGCTAAAAATCAATTCTAG+AGG + chr5_2:16556359-16556378 None:intergenic 30.0%
!! TAAGTTTAGAGAGCTTTGTT+TGG - chr5_2:16556836-16556855 Msa0760180:CDS 30.0%
CAAAACTAATGATAGGCAAA+AGG + chr5_2:16556978-16556997 None:intergenic 30.0%
!! TTGTTTTGTATACTTCAGTG+AGG - chr5_2:16557031-16557050 Msa0760180:intron 30.0%
! CTATCTTGTGGCTATAATTT+TGG - chr5_2:16557360-16557379 Msa0760180:intron 30.0%
ATCTTAGATATCTTCTCATC+AGG - chr5_2:16557558-16557577 Msa0760180:intron 30.0%
TTAGCTATACCATTGTAGAA+AGG + chr5_2:16557771-16557790 None:intergenic 30.0%
!! TTTGTTTTCTTGTTTGTCAC+TGG - chr5_2:16558184-16558203 Msa0760180:intron 30.0%
TCTCTTCTTGAATCTTCATT+AGG + chr5_2:16558221-16558240 None:intergenic 30.0%
! TGATCAATTTTATGTAGCCA+TGG - chr5_2:16558397-16558416 Msa0760180:intron 30.0%
TGAAAAATATTGTGAGACCA+TGG + chr5_2:16558417-16558436 None:intergenic 30.0%
!!! TTTTTTTTTTGTTTGGGGGA+GGG + chr5_2:16558550-16558569 None:intergenic 30.0%
!!! ATTTTTTTTTTGTTTGGGGG+AGG + chr5_2:16558551-16558570 None:intergenic 30.0%
GTACAATAGATACAAGAACA+AGG + chr5_2:16558722-16558741 None:intergenic 30.0%
CTTGTATCTATTGTACATGT+TGG - chr5_2:16558726-16558745 Msa0760180:intron 30.0%
TGTTTATAACGAATGCCATT+TGG + chr5_2:16558929-16558948 None:intergenic 30.0%
! AAAAAAGTATGTGCCCATTT+GGG + chr5_2:16558957-16558976 None:intergenic 30.0%
ATCTTCAAAGAAATACCTGA+CGG + chr5_2:16559545-16559564 None:intergenic 30.0%
!!! TTCTTTGAAGATTTTCGAGT+CGG - chr5_2:16559553-16559572 Msa0760180:intron 30.0%
GCATAACTTTGATGTTATTC+CGG + chr5_2:16559965-16559984 None:intergenic 30.0%
TATTCTCATAATCACGGATT+AGG - chr5_2:16560023-16560042 Msa0760180:intron 30.0%
!! AAGGAACTTAGTTTTTGAGA+TGG - chr5_2:16560208-16560227 Msa0760180:five_prime_UTR 30.0%
! CAGGTAGTGATCATTTTACA+TGG - chr5_2:16555809-16555828 Msa0760180:CDS 35.0%
!!! GGTTCCACTTTTTTTTGAAG+AGG - chr5_2:16555936-16555955 Msa0760180:intron 35.0%
AGAGGCAAAATTGATCTTAG+AGG - chr5_2:16555954-16555973 Msa0760180:intron 35.0%
! TCATGTGAAAGTGAGTTGAA+TGG + chr5_2:16556111-16556130 None:intergenic 35.0%
!!! AGTGTTTTTTGGTGCCATTT+TGG - chr5_2:16556231-16556250 Msa0760180:CDS 35.0%
GGAAGAGACAAAATTGGTTA+TGG - chr5_2:16556252-16556271 Msa0760180:CDS 35.0%
! TGAGTTGAACAATAAAGTCG+AGG + chr5_2:16556379-16556398 None:intergenic 35.0%
! TGGTTCTGCGTTGATAAAAA+TGG + chr5_2:16556492-16556511 None:intergenic 35.0%
CATGATTGAACTTATGGTGT+CGG - chr5_2:16556539-16556558 Msa0760180:intron 35.0%
GTGAACAATTCACAAGTCTA+AGG + chr5_2:16556573-16556592 None:intergenic 35.0%
CAGTCTATACTTAGACAGTT+GGG - chr5_2:16556681-16556700 Msa0760180:intron 35.0%
AAATGCTGTAAACGTCACAT+TGG + chr5_2:16556874-16556893 None:intergenic 35.0%
CTAAGGACTGTTGTAAGTAT+GGG - chr5_2:16557061-16557080 Msa0760180:intron 35.0%
CGGTAACTCATACGATATAT+TGG - chr5_2:16557140-16557159 Msa0760180:intron 35.0%
! TAGGTGATCAGGTAATCTTT+TGG - chr5_2:16557193-16557212 Msa0760180:intron 35.0%
! AGGTGATCAGGTAATCTTTT+GGG - chr5_2:16557194-16557213 Msa0760180:intron 35.0%
TTGTGCCTAATCTGATTTAC+TGG - chr5_2:16557337-16557356 Msa0760180:intron 35.0%
GATAGCCAGTAAATCAGATT+AGG + chr5_2:16557345-16557364 None:intergenic 35.0%
GGGTGAATGTTATTGTTGAT+TGG + chr5_2:16557444-16557463 None:intergenic 35.0%
AAACTTCGTCAAGAAGTAGA+AGG - chr5_2:16557475-16557494 Msa0760180:intron 35.0%
GTAGTAATTTACTGCCACAA+TGG - chr5_2:16557502-16557521 Msa0760180:intron 35.0%
!!! TGAGTGGAGTTTTTTACCTT+TGG - chr5_2:16557907-16557926 Msa0760180:intron 35.0%
AAGTCAAATCAGCAACCAAT+GGG + chr5_2:16558032-16558051 None:intergenic 35.0%
AAAGTCAAATCAGCAACCAA+TGG + chr5_2:16558033-16558052 None:intergenic 35.0%
AAATCTTCACGCTAAATGCA+GGG - chr5_2:16558324-16558343 Msa0760180:intron 35.0%
TCTAGATAAACTACATGCTG+AGG - chr5_2:16558649-16558668 Msa0760180:CDS 35.0%
TTGTAACCTGTACCTTTCAT+CGG - chr5_2:16558794-16558813 Msa0760180:intron 35.0%
! GGTTGATTATGTTCCTCTTT+TGG + chr5_2:16558887-16558906 None:intergenic 35.0%
GGATTAACTTTCTCATTTGC+AGG + chr5_2:16558908-16558927 None:intergenic 35.0%
! CAAAAAAGTATGTGCCCATT+TGG + chr5_2:16558958-16558977 None:intergenic 35.0%
! GACAAATCTTGGTGCAAAAA+AGG - chr5_2:16559346-16559365 Msa0760180:intron 35.0%
AAATGGATGTATGACCTACA+AGG + chr5_2:16559469-16559488 None:intergenic 35.0%
!!! AAGATTTTCGAGTCGGTATA+TGG - chr5_2:16559560-16559579 Msa0760180:intron 35.0%
TCAACAGTAACTCTATTTGG+TGG + chr5_2:16559658-16559677 None:intergenic 35.0%
CATCAAAGTTATGCCAACAT+TGG - chr5_2:16559971-16559990 Msa0760180:CDS 35.0%
CCTAATCAAAAGACCAATGT+TGG + chr5_2:16559987-16560006 None:intergenic 35.0%
!!! CCAACATTGGTCTTTTGATT+AGG - chr5_2:16559984-16560003 Msa0760180:CDS 35.0%
!!! ATTGGTCTTTTGATTAGGTG+CGG - chr5_2:16559989-16560008 Msa0760180:CDS 35.0%
!! TTTGATTTGCTTAAGCCCTT+AGG - chr5_2:16560178-16560197 Msa0760180:five_prime_UTR 35.0%
!! TTGATTTGCTTAAGCCCTTA+GGG - chr5_2:16560179-16560198 Msa0760180:five_prime_UTR 35.0%
AGTTCCTTAGATAACCCTAA+GGG + chr5_2:16560196-16560215 None:intergenic 35.0%
AAGTTCCTTAGATAACCCTA+AGG + chr5_2:16560197-16560216 None:intergenic 35.0%
AGAGAGCGAGAAGTTTCTAA+CGG + chr5_2:16555576-16555595 None:intergenic 40.0%
GAAGCAAGCTAGTAGATTGA+GGG - chr5_2:16555766-16555785 Msa0760180:three_prime_UTR 40.0%
ACAAGTTGCCAAACAACAAC+AGG - chr5_2:16555790-16555809 Msa0760180:exon 40.0%
! GATCACTACCTGTTGTTGTT+TGG + chr5_2:16555801-16555820 None:intergenic 40.0%
GCAGTCTATACTTAGACAGT+TGG - chr5_2:16556680-16556699 Msa0760180:intron 40.0%
CACTTCTACAAAGACTGCTA+AGG - chr5_2:16556776-16556795 Msa0760180:intron 40.0%
! GACGTTTACAGCATTTTCAG+CGG - chr5_2:16556878-16556897 Msa0760180:CDS 40.0%
! ATTTTCAGCGGCATATCGTT+CGG - chr5_2:16556890-16556909 Msa0760180:CDS 40.0%
TTCTGTTAGTTCCAAGCAGA+TGG - chr5_2:16556930-16556949 Msa0760180:intron 40.0%
GTATACTTCAGTGAGGAAGT+TGG - chr5_2:16557038-16557057 Msa0760180:intron 40.0%
GCTAAGGACTGTTGTAAGTA+TGG - chr5_2:16557060-16557079 Msa0760180:intron 40.0%
!! TTGAAGAGAAGCACTTGCAA+GGG + chr5_2:16557118-16557137 None:intergenic 40.0%
!! ATTGAAGAGAAGCACTTGCA+AGG + chr5_2:16557119-16557138 None:intergenic 40.0%
GCAAGTGCTTCTCTTCAATT+CGG - chr5_2:16557120-16557139 Msa0760180:CDS 40.0%
AATGAAAGGGAGACTTTGCT+TGG - chr5_2:16557165-16557184 Msa0760180:intron 40.0%
ATGAAAGGGAGACTTTGCTT+GGG - chr5_2:16557166-16557185 Msa0760180:intron 40.0%
! GGTGATCAGGTAATCTTTTG+GGG - chr5_2:16557195-16557214 Msa0760180:intron 40.0%
TTCTTCGATACTCTTCAGTG+TGG - chr5_2:16557221-16557240 Msa0760180:intron 40.0%
! CTGATTTACTGGCTATCTTG+TGG - chr5_2:16557348-16557367 Msa0760180:intron 40.0%
ACGAAGTTTGTCGTAGTTGT+GGG + chr5_2:16557464-16557483 None:intergenic 40.0%
TGTGGCAGTAAATTACTACC+TGG + chr5_2:16557501-16557520 None:intergenic 40.0%
ATACCATTGTAGAAAGGCTC+TGG + chr5_2:16557765-16557784 None:intergenic 40.0%
TGAACCACGATTAACCTCAT+AGG + chr5_2:16557881-16557900 None:intergenic 40.0%
CCTATCGAGTTACACCTATT+GGG + chr5_2:16557943-16557962 None:intergenic 40.0%
CCAATAGGTGTAACTCGATA+GGG - chr5_2:16557941-16557960 Msa0760180:intron 40.0%
AGTCAAATCAGCAACCAATG+GGG + chr5_2:16558031-16558050 None:intergenic 40.0%
! TTTCTTGTTTGTCACTGGCA+AGG - chr5_2:16558189-16558208 Msa0760180:intron 40.0%
CACAGTCAATCTGTCCATTA+GGG - chr5_2:16558276-16558295 Msa0760180:CDS 40.0%
GAAATCTTCACGCTAAATGC+AGG - chr5_2:16558323-16558342 Msa0760180:intron 40.0%
!! CTATTGTACATGTTGGCTTC+TGG - chr5_2:16558733-16558752 Msa0760180:intron 40.0%
TACCTTTCATCGGATGTTCT+TGG - chr5_2:16558804-16558823 Msa0760180:CDS 40.0%
GGAAATGATGTAGAGTCTTG+TGG + chr5_2:16558860-16558879 None:intergenic 40.0%
ATCATTTCCACTGCCAAAAG+AGG - chr5_2:16558871-16558890 Msa0760180:intron 40.0%
! TTATGTTCCTCTTTTGGCAG+TGG + chr5_2:16558881-16558900 None:intergenic 40.0%
!!! GGGCACATACTTTTTTGCAA+AGG - chr5_2:16558961-16558980 Msa0760180:intron 40.0%
AACAGTCAACTGCAGGAATA+TGG + chr5_2:16559044-16559063 None:intergenic 40.0%
! ATCCAGCTACCTCTTTTACA+TGG - chr5_2:16559253-16559272 Msa0760180:intron 40.0%
! TCCAGCTACCTCTTTTACAT+GGG - chr5_2:16559254-16559273 Msa0760180:intron 40.0%
!! CTCATCTTGATTTGCCTTGT+AGG - chr5_2:16559452-16559471 Msa0760180:intron 40.0%
CATTTGATGCTCAAGCTGAA+GGG - chr5_2:16559484-16559503 Msa0760180:intron 40.0%
ATTTGATGCTCAAGCTGAAG+GGG - chr5_2:16559485-16559504 Msa0760180:intron 40.0%
CTGGAAATTCAACCACCAAA+AGG + chr5_2:16559840-16559859 None:intergenic 40.0%
!! CTTTTGGTGGTTGAATTTCC+AGG - chr5_2:16559838-16559857 Msa0760180:intron 40.0%
TGGTCTGAAGGAGAATTCAA+TGG - chr5_2:16559875-16559894 Msa0760180:intron 40.0%
AATTCAATGGCAATGCTGGA+TGG - chr5_2:16559888-16559907 Msa0760180:intron 40.0%
TGTCTCTGTACATAAGCAGA+GGG + chr5_2:16559917-16559936 None:intergenic 40.0%
TAAGCCCTTAGGGTTATCTA+AGG - chr5_2:16560189-16560208 Msa0760180:five_prime_UTR 40.0%
TTTGAGAGTAGCACCAGACA+CGG + chr5_2:16555457-16555476 None:intergenic 45.0%
GTTAGAAACTTCTCGCTCTC+TGG - chr5_2:16555575-16555594 Msa0760180:three_prime_UTR 45.0%
TCTGGAAAGTCCCAGGTATA+AGG - chr5_2:16555593-16555612 Msa0760180:three_prime_UTR 45.0%
GGAAGCAAGCTAGTAGATTG+AGG - chr5_2:16555765-16555784 Msa0760180:three_prime_UTR 45.0%
TAAGCAAGTGTTCGGTTCTG+CGG + chr5_2:16556212-16556231 None:intergenic 45.0%
AACAAGCCTTAGCGTGTGTT+TGG + chr5_2:16556512-16556531 None:intergenic 45.0%
TGAGCGGTTCATTGCTAAGT+TGG + chr5_2:16556707-16556726 None:intergenic 45.0%
ACTTAGCAATGAACCGCTCA+TGG - chr5_2:16556707-16556726 Msa0760180:intron 45.0%
TCAGATTCATCAGCCATGAG+CGG + chr5_2:16556723-16556742 None:intergenic 45.0%
! TTTTCAGCGGCATATCGTTC+GGG - chr5_2:16556891-16556910 Msa0760180:CDS 45.0%
AGTTCCAAGCAGATGGAGAT+AGG - chr5_2:16556937-16556956 Msa0760180:intron 45.0%
TTCAGTGAGGAAGTTGGCTA+AGG - chr5_2:16557044-16557063 Msa0760180:intron 45.0%
!! TGAAGAGAAGCACTTGCAAG+GGG + chr5_2:16557117-16557136 None:intergenic 45.0%
GAGACTTTGCTTGGGATCTT+AGG - chr5_2:16557174-16557193 Msa0760180:intron 45.0%
GACGAAGTTTGTCGTAGTTG+TGG + chr5_2:16557465-16557484 None:intergenic 45.0%
! ATCAGGCTGCTGAAGTTTTG+AGG - chr5_2:16557575-16557594 Msa0760180:intron 45.0%
TTTCTGCAGAGAGTTCCATG+AGG - chr5_2:16557626-16557645 Msa0760180:intron 45.0%
!! TTCTGCATTCTGAAGCCTCA+TGG + chr5_2:16557644-16557663 None:intergenic 45.0%
AGAGCATAAATCTGCCCTTG+TGG - chr5_2:16557675-16557694 Msa0760180:intron 45.0%
TTCTCTACCAAGTGCCACAA+GGG + chr5_2:16557692-16557711 None:intergenic 45.0%
TCTCCAGAGCCTTTCTACAA+TGG - chr5_2:16557759-16557778 Msa0760180:intron 45.0%
TCGTGGTTCAACTGTTTGAG+TGG - chr5_2:16557891-16557910 Msa0760180:intron 45.0%
ATCGAGTTACACCTATTGGG+AGG + chr5_2:16557940-16557959 None:intergenic 45.0%
CCCAATAGGTGTAACTCGAT+AGG - chr5_2:16557940-16557959 Msa0760180:intron 45.0%
CCCTATCGAGTTACACCTAT+TGG + chr5_2:16557944-16557963 None:intergenic 45.0%
AATAACTTCCCCCTGAAAGG+AGG + chr5_2:16557993-16558012 None:intergenic 45.0%
GGAAATAACTTCCCCCTGAA+AGG + chr5_2:16557996-16558015 None:intergenic 45.0%
! CCTAATGGACAGATTGACTG+TGG + chr5_2:16558278-16558297 None:intergenic 45.0%
CCACAGTCAATCTGTCCATT+AGG - chr5_2:16558275-16558294 Msa0760180:CDS 45.0%
TTCACGCTAAATGCAGGGTT+CGG - chr5_2:16558329-16558348 Msa0760180:intron 45.0%
!!! TTTTTTTGTTTGGGGGAGGG+AGG + chr5_2:16558547-16558566 None:intergenic 45.0%
! AAAAGGGGGCACAAAAGGAA+AGG + chr5_2:16558583-16558602 None:intergenic 45.0%
! TTTCCTTTTGTGCCCCCTTT+TGG - chr5_2:16558582-16558601 Msa0760180:CDS 45.0%
! ATGCTGAGAGAGCTTTTCAC+CGG - chr5_2:16558612-16558631 Msa0760180:CDS 45.0%
! CTAGAATAACAAGGGCATGC+CGG + chr5_2:16558634-16558653 None:intergenic 45.0%
! GAACATCCGATGAAAGGTAC+AGG + chr5_2:16558803-16558822 None:intergenic 45.0%
CTCCAAGAACATCCGATGAA+AGG + chr5_2:16558809-16558828 None:intergenic 45.0%
CTTGATCAACAGTCAACTGC+AGG + chr5_2:16559051-16559070 None:intergenic 45.0%
TCCCATGTAAAAGAGGTAGC+TGG + chr5_2:16559258-16559277 None:intergenic 45.0%
TTCTGCGTCCCATGTAAAAG+AGG + chr5_2:16559265-16559284 None:intergenic 45.0%
CCTTCAGCTTGAGCATCAAA+TGG + chr5_2:16559486-16559505 None:intergenic 45.0%
CCATTTGATGCTCAAGCTGA+AGG - chr5_2:16559483-16559502 Msa0760180:intron 45.0%
CGATTATGTTGTAGTCCGTC+AGG - chr5_2:16559527-16559546 Msa0760180:intron 45.0%
GCAAGTCAAATCAGCTAGAC+TGG + chr5_2:16559806-16559825 None:intergenic 45.0%
AATTTCCAGGTTGCTGCCAA+TGG - chr5_2:16559851-16559870 Msa0760180:intron 45.0%
TTCTCCTTCAGACCATCCAT+TGG + chr5_2:16559870-16559889 None:intergenic 45.0%
GGAGAATTCAATGGCAATGC+TGG - chr5_2:16559884-16559903 Msa0760180:intron 45.0%
CTGTCTCTGTACATAAGCAG+AGG + chr5_2:16559918-16559937 None:intergenic 45.0%
CTCTGCTTATGTACAGAGAC+AGG - chr5_2:16559916-16559935 Msa0760180:intron 45.0%
AGTACCAGCGAACAAGATAC+CGG - chr5_2:16559943-16559962 Msa0760180:intron 45.0%
TATTCCGGTATCTTGTTCGC+TGG + chr5_2:16559950-16559969 None:intergenic 45.0%
!!! AAATAATTTTTTTTTTGTTT+GGG + chr5_2:16558556-16558575 None:intergenic 5.0%
!!! AAAATAATTTTTTTTTTGTT+TGG + chr5_2:16558557-16558576 None:intergenic 5.0%
GCAGAACCAAACACACGCTA+AGG - chr5_2:16556503-16556522 Msa0760180:intron 50.0%
TTTCAGCGGCATATCGTTCG+GGG - chr5_2:16556892-16556911 Msa0760180:CDS 50.0%
GTCACCTATCTCCATCTGCT+TGG + chr5_2:16556944-16556963 None:intergenic 50.0%
GGGACTGAGAATGACAACCA+AGG - chr5_2:16557081-16557100 Msa0760180:intron 50.0%
CAAGGGGGTAAGTACTACCT+TGG + chr5_2:16557101-16557120 None:intergenic 50.0%
!! GAAGAGAAGCACTTGCAAGG+GGG + chr5_2:16557116-16557135 None:intergenic 50.0%
GCTTGGGATCTTAGGTGATC+AGG - chr5_2:16557182-16557201 Msa0760180:intron 50.0%
TCGTCAAGAAGTAGAAGGCC+AGG - chr5_2:16557480-16557499 Msa0760180:intron 50.0%
CTGCCACAATGGCATGCATA+TGG - chr5_2:16557513-16557532 Msa0760180:intron 50.0%
CCACCATATGCATGCCATTG+TGG + chr5_2:16557519-16557538 None:intergenic 50.0%
CCACAATGGCATGCATATGG+TGG - chr5_2:16557516-16557535 Msa0760180:intron 50.0%
!! TGAGGCGTCGATCAAAGTTG+AGG - chr5_2:16557593-16557612 Msa0760180:intron 50.0%
!! GAGGCGTCGATCAAAGTTGA+GGG - chr5_2:16557594-16557613 Msa0760180:intron 50.0%
AAATCTGCCCTTGTGGCACT+TGG - chr5_2:16557682-16557701 Msa0760180:intron 50.0%
CTTCTCTACCAAGTGCCACA+AGG + chr5_2:16557693-16557712 None:intergenic 50.0%
TGCTGCTATGTCGTCAGTTG+AGG - chr5_2:16557717-16557736 Msa0760180:intron 50.0%
GAGTGTCAAAAGCTCTCGGT+TGG + chr5_2:16557857-16557876 None:intergenic 50.0%
AGGCGAGTGTCAAAAGCTCT+CGG + chr5_2:16557861-16557880 None:intergenic 50.0%
! GCTTTTGACACTCGCCTATG+AGG - chr5_2:16557864-16557883 Msa0760180:intron 50.0%
CTCGCCTATGAGGTTAATCG+TGG - chr5_2:16557874-16557893 Msa0760180:intron 50.0%
ATTGGGAGGCTGAGAACCAA+AGG + chr5_2:16557926-16557945 None:intergenic 50.0%
! TTGGTTCTCAGCCTCCCAAT+AGG - chr5_2:16557926-16557945 Msa0760180:intron 50.0%
ACTCGCGTTCTACACCCTAA+TGG + chr5_2:16558293-16558312 None:intergenic 50.0%
TCAGCATCCACCTGCCAAAA+GGG + chr5_2:16558599-16558618 None:intergenic 50.0%
!! CATATCGTTCGGGGCGTTGA+AGG - chr5_2:16556901-16556920 Msa0760180:CDS 55.0%
GATTCGAACCCAGATTCCCC+AGG - chr5_2:16557963-16557982 Msa0760180:intron 55.0%
GAGGAGAACCTGGGGAATCT+GGG + chr5_2:16557974-16557993 None:intergenic 55.0%
CCTGAAAGGAGGAGAACCTG+GGG + chr5_2:16557982-16558001 None:intergenic 55.0%
CCCTGAAAGGAGGAGAACCT+GGG + chr5_2:16557983-16558002 None:intergenic 55.0%
CCCAGGTTCTCCTCCTTTCA+GGG - chr5_2:16557980-16557999 Msa0760180:intron 55.0%
CCAGGTTCTCCTCCTTTCAG+GGG - chr5_2:16557981-16558000 Msa0760180:CDS 55.0%
CAGGTTCTCCTCCTTTCAGG+GGG - chr5_2:16557982-16558001 Msa0760180:CDS 55.0%
! CCAATGGGGTGTTTGTCGAG+TGG + chr5_2:16558017-16558036 None:intergenic 55.0%
CCACTCGACAAACACCCCAT+TGG - chr5_2:16558014-16558033 Msa0760180:CDS 55.0%
! CTGCCAAAAGGGGGCACAAA+AGG + chr5_2:16558588-16558607 None:intergenic 55.0%
! CTTTTGTGCCCCCTTTTGGC+AGG - chr5_2:16558586-16558605 Msa0760180:CDS 55.0%
AGCATCCACCTGCCAAAAGG+GGG + chr5_2:16558597-16558616 None:intergenic 55.0%
CAGCATCCACCTGCCAAAAG+GGG + chr5_2:16558598-16558617 None:intergenic 55.0%
CTCAGCATCCACCTGCCAAA+AGG + chr5_2:16558600-16558619 None:intergenic 55.0%
TCCAGGTTGCTGCCAATGGA+TGG - chr5_2:16559855-16559874 Msa0760180:intron 55.0%
ACCATCCATTGGCAGCAACC+TGG + chr5_2:16559859-16559878 None:intergenic 55.0%
GCTGCCAATGGATGGTCTGA+AGG - chr5_2:16559863-16559882 Msa0760180:intron 55.0%
GTCAAGCTCGTGTCCGTGTC+TGG - chr5_2:16555441-16555460 Msa0760180:three_prime_UTR 60.0%
! CTCGCTCTCTGGAAAGTCCC+AGG - chr5_2:16555586-16555605 Msa0760180:three_prime_UTR 60.0%
GGAGGAGAACCTGGGGAATC+TGG + chr5_2:16557975-16557994 None:intergenic 60.0%
CCCCAGGTTCTCCTCCTTTC+AGG - chr5_2:16557979-16557998 Msa0760180:intron 60.0%
CCCCTGAAAGGAGGAGAACC+TGG + chr5_2:16557984-16558003 None:intergenic 60.0%
! TTGTGCCCCCTTTTGGCAGG+TGG - chr5_2:16558589-16558608 Msa0760180:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 16555440 16560321 16555440 ID=Msa0760180;Name=Msa0760180
chr5_2 mRNA 16555440 16560321 16555440 ID=Msa0760180-mRNA-1;Parent=Msa0760180;Name=Msa0760180-mRNA-1;_AED=0.15;_eAED=0.15;_QI=194|0.8|0.90|1|0.7|0.72|11|351|374
chr5_2 exon 16555440 16555901 16555440 ID=Msa0760180-mRNA-1:exon:7330;Parent=Msa0760180-mRNA-1
chr5_2 exon 16556213 16556287 16556213 ID=Msa0760180-mRNA-1:exon:7329;Parent=Msa0760180-mRNA-1
chr5_2 exon 16556779 16556928 16556779 ID=Msa0760180-mRNA-1:exon:7328;Parent=Msa0760180-mRNA-1
chr5_2 exon 16557091 16557153 16557091 ID=Msa0760180-mRNA-1:exon:7327;Parent=Msa0760180-mRNA-1
chr5_2 exon 16557981 16558181 16557981 ID=Msa0760180-mRNA-1:exon:7326;Parent=Msa0760180-mRNA-1
chr5_2 exon 16558213 16558338 16558213 ID=Msa0760180-mRNA-1:exon:7325;Parent=Msa0760180-mRNA-1
chr5_2 exon 16558558 16558712 16558558 ID=Msa0760180-mRNA-1:exon:7324;Parent=Msa0760180-mRNA-1
chr5_2 exon 16558803 16558872 16558803 ID=Msa0760180-mRNA-1:exon:7323;Parent=Msa0760180-mRNA-1
chr5_2 exon 16558964 16559077 16558964 ID=Msa0760180-mRNA-1:exon:7322;Parent=Msa0760180-mRNA-1
chr5_2 exon 16559950 16560035 16559950 ID=Msa0760180-mRNA-1:exon:7321;Parent=Msa0760180-mRNA-1
chr5_2 exon 16560154 16560321 16560154 ID=Msa0760180-mRNA-1:exon:7320;Parent=Msa0760180-mRNA-1
chr5_2 five_prime_UTR 16560154 16560321 16560154 ID=Msa0760180-mRNA-1:five_prime_utr;Parent=Msa0760180-mRNA-1
chr5_2 five_prime_UTR 16560010 16560035 16560010 ID=Msa0760180-mRNA-1:five_prime_utr;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16559950 16560009 16559950 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16558964 16559077 16558964 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16558803 16558872 16558803 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16558558 16558712 16558558 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16558213 16558338 16558213 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16557981 16558181 16557981 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16557091 16557153 16557091 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16556779 16556928 16556779 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16556213 16556287 16556213 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 CDS 16555791 16555901 16555791 ID=Msa0760180-mRNA-1:cds;Parent=Msa0760180-mRNA-1
chr5_2 three_prime_UTR 16555440 16555790 16555440 ID=Msa0760180-mRNA-1:three_prime_utr;Parent=Msa0760180-mRNA-1
Gene Sequence

>Msa0760180

ATGGATGCTATAAGGAAGCAAGCTAGTAGATTGAGGGAACAAGTTGCCAAACAACAACAGTCTATACTTAGACAGTTGGGCCAACTTAGCAATGAACCGCTCATGGCTGATGAATCTGAACTTGAATGTTTTCATAAACTTCAAAAGTTATACACTTCTACAAAGACTGCTAAGCATTTTCAGCGGCATATCGTTCGGGGCGTTGAAGGATTAATTTCTGTTAGTTCCAAGCAGATGGAGATAGTGAGGAAGTTGGCTAAGGACTGTTGTAAGTATGGGACTGAGAATGACAACCAAGGTAGTACTTACCCCCTTGCAAGTGCTTCTCTTCAATTCGGTAACTCATACGATATATTGGAAAATGAAAGGGAGACTTTGCTTGGGATCTTAGGTGATCAGATCAACTTAAGAGAAGTACCAATCAACAATAACATTCACCCACAACTACGACAAACTTCGTCAAGAAGTAGAAGGCCAGGTAGTAATTTACTGCCACAATGGCATGCATATGGTGGTGTGCAATGCGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATTCTTCTCTTTCTGCAGAGAGTTCCATGAGGCTTCAGAATGCAGAAAAAAAGTTGAAAGAGCATAAATCTGCCCTTGTGGCACTTGGTAGAGAAGCAACTGCTGCTATGTCGTCAGTTGAGGAACAACAGCAACATATAACTCTCCAGAGCCTTTCTACAATGGTGGATGCTGAGAGAGCTTTTCACCGGCATGCCCTTGTTATTCTAGATAAACTACATGCTGAGATGATCATGATTGATGAGAGACAACCACAAGACTCTACATCATTTCCACTGCCAAAAGAGGAACATAATCAACCTGCAAATGAGAAAGTTAATCCAAATGGCATTCGTTATAAACATAACACCCAAATGGGCACATACTTTTTTGCAAAGGTCATACATCCATTTGATGCTCAAGCTGAAGGGGAGTTAAGTTTATCAGTTGACGATTATGTTGTAGTCCGTCAGGTTGCTGCCAATGGATGGTCTGAAGGAGAATTCAATGGCAATGCTGGATGGTTTCCCTCTGCTTATGTACAGAGACAGGACGTAGTACCAGCGAACAAGATACCGGAATAA

Protein sequence

>Msa0760180

MDAIRKQASRLREQVAKQQQSILRQLGQLSNEPLMADESELECFHKLQKLYTSTKTAKHFQRHIVRGVEGLISVSSKQMEIVRKLAKDCCKYGTENDNQGSTYPLASASLQFGNSYDILENERETLLGILGDQINLREVPINNNIHPQLRQTSSRSRRPGSNLLPQWHAYGGVQCAAEVLRRRSKLRDSSLSAESSMRLQNAEKKLKEHKSALVALGREATAAMSSVEEQQQHITLQSLSTMVDAERAFHRHALVILDKLHAEMIMIDERQPQDSTSFPLPKEEHNQPANEKVNPNGIRYKHNTQMGTYFFAKVIHPFDAQAEGELSLSVDDYVVVRQVAANGWSEGEFNGNAGWFPSAYVQRQDVVPANKIPE*