AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0760250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760250 MtrunA17_Chr5g0408971 85.789 380 34 2 1 374 1 366 0.0 650
Msa0760250 MtrunA17_Chr3g0145091 44.529 393 175 11 1 374 1 369 1.18e-87 269
Msa0760250 MtrunA17_Chr4g0035851 42.857 392 184 11 1 374 1 370 6.87e-80 249
Msa0760250 MtrunA17_Chr8g0380121 34.908 381 201 9 1 372 1 343 1.60e-68 219
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760250 AT4G34660.1 42.821 390 183 10 1 374 1 366 1.02e-88 272
Msa0760250 AT4G34660.2 41.026 390 167 11 1 374 1 343 6.96e-80 249
Msa0760250 AT4G34660.3 39.474 380 159 6 1 374 1 315 8.32e-77 240
Msa0760250 AT4G18060.1 37.135 377 193 9 1 368 1 342 1.52e-75 238
Msa0760250 AT1G31440.1 44.300 307 151 5 1 297 1 297 9.05e-72 231
Msa0760250 AT1G31440.1 57.009 107 42 1 272 374 327 433 4.26e-33 128
Msa0760250 AT4G39020.1 45.055 91 49 1 284 374 78 167 1.05e-18 83.2

Find 103 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCAATCACATGATATTA+TGG 0.226560 5_2:+16696414 None:intergenic
GGATTAACTTTCTCATTTGC+AGG 0.288088 5_2:+16697567 None:intergenic
GAGACTTTGCTTGGGATCTT+AGG 0.291927 5_2:-16699297 Msa0760250:CDS
GGTTGATTATGTTCCTCTTT+TGG 0.303218 5_2:+16697588 None:intergenic
CGGTAACTCATACGATATAT+TGG 0.313275 5_2:-16699331 Msa0760250:CDS
GCTAAGGACTGTTGTAAGTA+TGG 0.317953 5_2:-16699411 Msa0760250:CDS
ACAGACCATTCTATATAATA+TGG 0.328812 5_2:+16696233 None:intergenic
GCATAACTTTGATGTTATTC+CGG 0.330937 5_2:+16696510 None:intergenic
TTTGATTTGCTTAAGCCCTT+AGG 0.379562 5_2:-16696294 Msa0760250:three_prime_UTR
GCTTGGGATCTTAGGTGATC+AGG 0.383065 5_2:-16699289 Msa0760250:intron
TGTTTATAACGAATGCCATT+TGG 0.388959 5_2:+16697546 None:intergenic
GTTAGAAACTTCTCGCTCTC+TGG 0.393392 5_2:-16700896 Msa0760250:five_prime_UTR
TAAGCCCTTAGGGTTATCTA+AGG 0.400401 5_2:-16696283 Msa0760250:three_prime_UTR
GTCAAGCTCGTGTCCGTGTC+TGG 0.400581 5_2:-16701030 Msa0760250:five_prime_UTR
AAGTTTCTAACGGAAGAAAA+AGG 0.404532 5_2:+16700908 None:intergenic
TATTCTCATAATCACGGATT+AGG 0.405195 5_2:-16696449 Msa0760250:three_prime_UTR
GATCACTACCTGTTGTTGTT+TGG 0.414946 5_2:+16700673 None:intergenic
GCAAGTGCTTCTCTTCAATT+CGG 0.418266 5_2:-16699351 Msa0760250:CDS
GGAGAATTCAATGGCAATGC+TGG 0.418558 5_2:-16696588 Msa0760250:CDS
TTGATTTGCTTAAGCCCTTA+GGG 0.420745 5_2:-16696293 Msa0760250:three_prime_UTR
TATAAACATAACACCCAAAT+GGG 0.436203 5_2:-16697531 Msa0760250:CDS
GGGTGAATGTTATTGTTGAT+TGG 0.437946 5_2:+16699030 None:intergenic
CGATTATGTTGTAGTCCGTC+AGG 0.438244 5_2:-16696945 Msa0760250:intron
TTCTGCATTCTGAAGCCTCA+TGG 0.443561 5_2:+16698830 None:intergenic
TTATAAACATAACACCCAAA+TGG 0.448386 5_2:-16697532 Msa0760250:CDS
CATATCGTTCGGGGCGTTGA+AGG 0.452090 5_2:-16699570 Msa0760250:CDS
TTCTGTTAGTTCCAAGCAGA+TGG 0.454303 5_2:-16699541 Msa0760250:CDS
CCTTCAGCTTGAGCATCAAA+TGG 0.458512 5_2:+16696989 None:intergenic
AATGAGAAAGTTAATCCAAA+TGG 0.467279 5_2:-16697561 Msa0760250:CDS
ATCATTTCCACTGCCAAAAG+AGG 0.468115 5_2:-16697601 Msa0760250:CDS
CAGTCTATACTTAGACAGTT+GGG 0.468435 5_2:-16699790 Msa0760250:CDS
ATACCATTGTAGAAAGGCTC+TGG 0.470481 5_2:+16698709 None:intergenic
AGTTCCAAGCAGATGGAGAT+AGG 0.472353 5_2:-16699534 Msa0760250:intron
GGAAGCAAGCTAGTAGATTG+AGG 0.473119 5_2:-16700706 Msa0760250:CDS
AATGAAAGGGAGACTTTGCT+TGG 0.475575 5_2:-16699306 Msa0760250:CDS
ACAAGTTGCCAAACAACAAC+AGG 0.480217 5_2:-16700681 Msa0760250:intron
AATGTCCATATTATATAGAA+TGG 0.488035 5_2:-16696238 Msa0760250:three_prime_UTR
TATTCCGGTATCTTGTTCGC+TGG 0.489472 5_2:+16696525 None:intergenic
GCAGTCTATACTTAGACAGT+TGG 0.490454 5_2:-16699791 Msa0760250:intron
CCATTTGATGCTCAAGCTGA+AGG 0.493578 5_2:-16696989 Msa0760250:CDS
AAACTTCGTCAAGAAGTAGA+AGG 0.493785 5_2:-16698996 Msa0760250:CDS
GAGGCGTCGATCAAAGTTGA+GGG 0.496376 5_2:-16698877 Msa0760250:CDS
AATTTCCAGGTTGCTGCCAA+TGG 0.498806 5_2:-16696621 Msa0760250:intron
GTCACCTATCTCCATCTGCT+TGG 0.502296 5_2:+16699530 None:intergenic
GACGAAGTTTGTCGTAGTTG+TGG 0.502788 5_2:+16699009 None:intergenic
TGAGCGGTTCATTGCTAAGT+TGG 0.503839 5_2:+16699767 None:intergenic
ACGATATATTGGAAAATGAA+AGG 0.504543 5_2:-16699320 Msa0760250:CDS
ACGAAGTTTGTCGTAGTTGT+GGG 0.505034 5_2:+16699010 None:intergenic
TTAGCTATACCATTGTAGAA+AGG 0.507899 5_2:+16698703 None:intergenic
TCGTCAAGAAGTAGAAGGCC+AGG 0.512767 5_2:-16698991 Msa0760250:CDS
ATGAAAGGGAGACTTTGCTT+GGG 0.515856 5_2:-16699305 Msa0760250:CDS
CGATATATTGGAAAATGAAA+GGG 0.517703 5_2:-16699319 Msa0760250:CDS
AAATCTGCCCTTGTGGCACT+TGG 0.518166 5_2:-16698789 Msa0760250:CDS
GAAGCAAGCTAGTAGATTGA+GGG 0.520089 5_2:-16700705 Msa0760250:CDS
CTGCCACAATGGCATGCATA+TGG 0.523066 5_2:-16698958 Msa0760250:CDS
TCCAGGTTGCTGCCAATGGA+TGG 0.529779 5_2:-16696617 Msa0760250:intron
ACTTAGCAATGAACCGCTCA+TGG 0.537092 5_2:-16699764 Msa0760250:CDS
CTCGCTCTCTGGAAAGTCCC+AGG 0.540030 5_2:-16700885 Msa0760250:intron
TTGAAGAGAAGCACTTGCAA+GGG 0.540806 5_2:+16699356 None:intergenic
CTCTGCTTATGTACAGAGAC+AGG 0.541764 5_2:-16696556 Msa0760250:CDS
TGCTGCTATGTCGTCAGTTG+AGG 0.543649 5_2:-16698754 Msa0760250:CDS
CTAAGGACTGTTGTAAGTAT+GGG 0.544371 5_2:-16699410 Msa0760250:CDS
GTATACTTCAGTGAGGAAGT+TGG 0.546550 5_2:-16699433 Msa0760250:intron
CCTAATCAAAAGACCAATGT+TGG 0.550105 5_2:+16696488 None:intergenic
ATTGAAGAGAAGCACTTGCA+AGG 0.556652 5_2:+16699355 None:intergenic
AAGTTCCTTAGATAACCCTA+AGG 0.557549 5_2:+16696278 None:intergenic
TTCAGTGAGGAAGTTGGCTA+AGG 0.558875 5_2:-16699427 Msa0760250:intron
TTCTCCTTCAGACCATCCAT+TGG 0.561878 5_2:+16696605 None:intergenic
CATTTGATGCTCAAGCTGAA+GGG 0.565005 5_2:-16696988 Msa0760250:CDS
CCACCATATGCATGCCATTG+TGG 0.569659 5_2:+16698955 None:intergenic
TGAGGCGTCGATCAAAGTTG+AGG 0.570936 5_2:-16698878 Msa0760250:CDS
CTAGAATAACAAGGGCATGC+CGG 0.575931 5_2:+16697841 None:intergenic
CTTCTCTACCAAGTGCCACA+AGG 0.578531 5_2:+16698781 None:intergenic
CATCAAAGTTATGCCAACAT+TGG 0.578617 5_2:-16696501 Msa0760250:three_prime_UTR
TTTCAGCGGCATATCGTTCG+GGG 0.580469 5_2:-16699579 Msa0760250:CDS
TGGTCTGAAGGAGAATTCAA+TGG 0.582228 5_2:-16696597 Msa0760250:CDS
AATTCAATGGCAATGCTGGA+TGG 0.583292 5_2:-16696584 Msa0760250:CDS
ATTTGATGCTCAAGCTGAAG+GGG 0.584498 5_2:-16696987 Msa0760250:CDS
CACTTCTACAAAGACTGCTA+AGG 0.584795 5_2:-16699695 Msa0760250:intron
AGTACCAGCGAACAAGATAC+CGG 0.589399 5_2:-16696529 Msa0760250:CDS
ACTGTATATTCTCATAATCA+CGG 0.593578 5_2:-16696455 Msa0760250:three_prime_UTR
GCTGCCAATGGATGGTCTGA+AGG 0.596789 5_2:-16696609 Msa0760250:CDS
TCTAGATAAACTACATGCTG+AGG 0.597051 5_2:-16697823 Msa0760250:intron
AGAGAGCGAGAAGTTTCTAA+CGG 0.603263 5_2:+16700898 None:intergenic
TCTCCAGAGCCTTTCTACAA+TGG 0.606321 5_2:-16698712 Msa0760250:intron
TTCTCTACCAAGTGCCACAA+GGG 0.615566 5_2:+16698782 None:intergenic
TGTAATTCTAAATGAAAACA+TGG 0.617627 5_2:-16696213 Msa0760250:three_prime_UTR
CTGTCTCTGTACATAAGCAG+AGG 0.628802 5_2:+16696557 None:intergenic
AGTTCCTTAGATAACCCTAA+GGG 0.632998 5_2:+16696279 None:intergenic
GTAGTAATTTACTGCCACAA+TGG 0.633358 5_2:-16698969 Msa0760250:CDS
AGAGCATAAATCTGCCCTTG+TGG 0.636988 5_2:-16698796 Msa0760250:CDS
TTTGAGAGTAGCACCAGACA+CGG 0.640529 5_2:+16701017 None:intergenic
TGAAGAGAAGCACTTGCAAG+GGG 0.649136 5_2:+16699357 None:intergenic
TGTGGCAGTAAATTACTACC+TGG 0.653030 5_2:+16698973 None:intergenic
TCAGATTCATCAGCCATGAG+CGG 0.654677 5_2:+16699751 None:intergenic
GTAGTTTATCTAGAATAACA+AGG 0.660690 5_2:+16697832 None:intergenic
TGTCTCTGTACATAAGCAGA+GGG 0.668894 5_2:+16696558 None:intergenic
GGAAATGATGTAGAGTCTTG+TGG 0.677018 5_2:+16697615 None:intergenic
TAGTTTATCTAGAATAACAA+GGG 0.682515 5_2:+16697833 None:intergenic
CCACAATGGCATGCATATGG+TGG 0.703096 5_2:-16698955 Msa0760250:CDS
TTTCTGCAGAGAGTTCCATG+AGG 0.703430 5_2:-16698845 Msa0760250:CDS
GAAGAGAAGCACTTGCAAGG+GGG 0.737031 5_2:+16699358 None:intergenic
GGGACTGAGAATGACAACCA+AGG 0.745093 5_2:-16699390 Msa0760250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTGTAAAAAGAAAAA+TGG - chr5_2:16696467-16696486 Msa0760250:three_prime_UTR 10.0%
!!! AATTAAATCAAAATCAATTT+TGG - chr5_2:16696917-16696936 Msa0760250:intron 10.0%
!! AATATATTAACAAAGTAAAA+TGG + chr5_2:16698796-16698815 None:intergenic 10.0%
!!! AAATTCATAATTTTTTAATG+AGG - chr5_2:16699176-16699195 Msa0760250:intron 10.0%
!!! AATAATTTTTTTTTTGTTTG+GGG + chr5_2:16699288-16699307 None:intergenic 10.0%
!!! ATTTTATTGCTTATATAAAT+TGG + chr5_2:16699954-16699973 None:intergenic 10.0%
!! AATATCATTATTAATATTTG+CGG - chr5_2:16700482-16700501 Msa0760250:intron 10.0%
!!! GATTTTGATTTAATTGATTT+TGG + chr5_2:16696912-16696931 None:intergenic 15.0%
!!! TGATAACATCATATATTTTA+CGG + chr5_2:16698021-16698040 None:intergenic 15.0%
!! TATCTAATTAAATGTTTGTT+TGG - chr5_2:16699199-16699218 Msa0760250:intron 15.0%
!!! ATAATTTTTTTTTTGTTTGG+GGG + chr5_2:16699287-16699306 None:intergenic 15.0%
!!! TGATTCTATAAAGTTGATTT+GGG + chr5_2:16697190-16697209 None:intergenic 20.0%
!!! TTGATTCTATAAAGTTGATT+TGG + chr5_2:16697191-16697210 None:intergenic 20.0%
!! CTTAATAACTAACTGATAAA+TGG + chr5_2:16697554-16697573 None:intergenic 20.0%
!! TTGAAGATGTAAATATTTGT+TGG - chr5_2:16698885-16698904 Msa0760250:CDS 20.0%
!!! TAGTTTATCTAGAATAACAA+GGG + chr5_2:16699375-16699394 None:intergenic 20.0%
!! TTCCAATTTGAAAGAATTAT+TGG + chr5_2:16699423-16699442 None:intergenic 20.0%
!! AGATCAACATTAAAAAGAAA+TGG + chr5_2:16699880-16699899 None:intergenic 20.0%
!! TCATAAAATAAGACAAATCT+TGG - chr5_2:16700068-16700087 Msa0760250:intron 20.0%
!!! TTGAACTTCTTAAGTAATTT+TGG - chr5_2:16700316-16700335 Msa0760250:intron 20.0%
!!! TTGCATTTTTATTTTCCTTT+TGG - chr5_2:16700555-16700574 Msa0760250:intron 20.0%
!! AATGTCCATATTATATAGAA+TGG - chr5_2:16700967-16700986 Msa0760250:five_prime_UTR 20.0%
!! TGTAATTCTAAATGAAAACA+TGG - chr5_2:16700992-16701011 Msa0760250:five_prime_UTR 20.0%
!! GGAAGAAAAAGGTATAATAA+TGG + chr5_2:16696289-16696308 None:intergenic 25.0%
! AAAAGTAAGAGAACAAATGA+AGG + chr5_2:16696372-16696391 None:intergenic 25.0%
! AAAGAAAAATGGATGCTATA+AGG - chr5_2:16696478-16696497 Msa0760250:three_prime_UTR 25.0%
!! ATTTTGCACTAGTACTATTT+AGG - chr5_2:16696576-16696595 Msa0760250:CDS 25.0%
! AAACAAGCTTATTGTATGTT+TGG - chr5_2:16696649-16696668 Msa0760250:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG - chr5_2:16696717-16696736 Msa0760250:intron 25.0%
! ATGTGAAAGTCATTTATGTT+CGG + chr5_2:16696874-16696893 None:intergenic 25.0%
! TTACTTCATGATTGAACTTA+TGG - chr5_2:16697267-16697286 Msa0760250:intron 25.0%
! GCATAAACAAAACTAATGAT+AGG + chr5_2:16697719-16697738 None:intergenic 25.0%
!!! TTAGTTTTGTTTATGCTTCA+AGG - chr5_2:16697723-16697742 Msa0760250:intron 25.0%
! ACAAAACATCAATCAATTAC+TGG + chr5_2:16697749-16697768 None:intergenic 25.0%
! ACGATATATTGGAAAATGAA+AGG - chr5_2:16697885-16697904 Msa0760250:intron 25.0%
! CGATATATTGGAAAATGAAA+GGG - chr5_2:16697886-16697905 Msa0760250:intron 25.0%
!! GTAGTTTATCTAGAATAACA+AGG + chr5_2:16699376-16699395 None:intergenic 25.0%
! CAATTTGAAAGAATTATTGG+TGG + chr5_2:16699420-16699439 None:intergenic 25.0%
! CACCAATAATTCTTTCAAAT+TGG - chr5_2:16699418-16699437 Msa0760250:CDS 25.0%
! AATGAGAAAGTTAATCCAAA+TGG - chr5_2:16699644-16699663 Msa0760250:intron 25.0%
! TTATAAACATAACACCCAAA+TGG - chr5_2:16699673-16699692 Msa0760250:intron 25.0%
! TATAAACATAACACCCAAAT+GGG - chr5_2:16699674-16699693 Msa0760250:intron 25.0%
! ATATGGTTGTAATGTAATGT+AGG + chr5_2:16699760-16699779 None:intergenic 25.0%
! CAAAGCTAAATCATTTGAAT+AGG + chr5_2:16699813-16699832 None:intergenic 25.0%
!! CTATTCAAATGATTTAGCTT+TGG - chr5_2:16699811-16699830 Msa0760250:intron 25.0%
! ATGTAGATAAAATATTGCAC+TGG + chr5_2:16700148-16700167 None:intergenic 25.0%
! AAATCAACAGTAACTCTATT+TGG + chr5_2:16700394-16700413 None:intergenic 25.0%
! TTATTAATATTTGCGGAAGT+TGG - chr5_2:16700489-16700508 Msa0760250:intron 25.0%
!!! CATTTTTATTTTCCTTTTGG+TGG - chr5_2:16700558-16700577 Msa0760250:intron 25.0%
! ACTGTATATTCTCATAATCA+CGG - chr5_2:16700750-16700769 Msa0760250:intron 25.0%
! ATTGCAATCACATGATATTA+TGG + chr5_2:16700794-16700813 None:intergenic 25.0%
!!! CATGTGATTGCAATTTTTTT+TGG - chr5_2:16700800-16700819 Msa0760250:intron 25.0%
!!! TGATTGCAATTTTTTTTGGA+TGG - chr5_2:16700804-16700823 Msa0760250:intron 25.0%
! ACAGACCATTCTATATAATA+TGG + chr5_2:16700975-16700994 None:intergenic 25.0%
AAGTTTCTAACGGAAGAAAA+AGG + chr5_2:16696300-16696319 None:intergenic 30.0%
ACTAAGAATACCTTATACCT+GGG + chr5_2:16696340-16696359 None:intergenic 30.0%
AACTAAGAATACCTTATACC+TGG + chr5_2:16696341-16696360 None:intergenic 30.0%
TGATCAGAAAAAGATTGAGT+TGG + chr5_2:16696404-16696423 None:intergenic 30.0%
! CTTTTCTTTGTAGTAGAGAA+AGG + chr5_2:16696435-16696454 None:intergenic 30.0%
TTTGCCTCTTCAAAAAAAAG+TGG + chr5_2:16696677-16696696 None:intergenic 30.0%
AAGCTAAAAATCAACTCTAG+AGG + chr5_2:16696813-16696832 None:intergenic 30.0%
!!! CTAGAGTTGATTTTTAGCTT+TGG - chr5_2:16696813-16696832 Msa0760250:intron 30.0%
AAAAACACTAAGCAAGTGTT+CGG + chr5_2:16696954-16696973 None:intergenic 30.0%
!!! AACACTTGCTTAGTGTTTTT+TGG - chr5_2:16696954-16696973 Msa0760250:CDS 30.0%
! CAATTTTGTCTCTTCCAAAA+TGG + chr5_2:16696982-16697001 None:intergenic 30.0%
!! CATTTTGGAAGAGACAAAAT+TGG - chr5_2:16696980-16696999 Msa0760250:CDS 30.0%
AGGCTAAAAATCAATTCTAG+AGG + chr5_2:16697093-16697112 None:intergenic 30.0%
!! TAAGTTTAGAGAGCTTTGTT+TGG - chr5_2:16697570-16697589 Msa0760250:CDS 30.0%
CAAAACTAATGATAGGCAAA+AGG + chr5_2:16697712-16697731 None:intergenic 30.0%
!! TTGTTTTGTATACTTCAGTG+AGG - chr5_2:16697765-16697784 Msa0760250:intron 30.0%
! CTATCTTGTGGCTATAATTT+TGG - chr5_2:16698094-16698113 Msa0760250:intron 30.0%
ATCTTAGATATCTTCTCATC+AGG - chr5_2:16698292-16698311 Msa0760250:intron 30.0%
TTAGCTATACCATTGTAGAA+AGG + chr5_2:16698505-16698524 None:intergenic 30.0%
!! TTTGTTTTCTTGTTTGTCAC+TGG - chr5_2:16698917-16698936 Msa0760250:intron 30.0%
TCTCTTCTTGAATCTTCATT+AGG + chr5_2:16698954-16698973 None:intergenic 30.0%
! TGATCAATTTTATGTAGCCA+TGG - chr5_2:16699130-16699149 Msa0760250:intron 30.0%
TGAAAAATATTGTGAGACCA+TGG + chr5_2:16699150-16699169 None:intergenic 30.0%
!!! TTTTTTTTTTGTTTGGGGGA+GGG + chr5_2:16699283-16699302 None:intergenic 30.0%
!!! ATTTTTTTTTTGTTTGGGGG+AGG + chr5_2:16699284-16699303 None:intergenic 30.0%
GTACAATAGATACAAGAACA+AGG + chr5_2:16699455-16699474 None:intergenic 30.0%
CTTGTATCTATTGTACATGT+TGG - chr5_2:16699459-16699478 Msa0760250:intron 30.0%
TGTTTATAACGAATGCCATT+TGG + chr5_2:16699662-16699681 None:intergenic 30.0%
! AAAAAAGTATGTGCCCATTT+GGG + chr5_2:16699690-16699709 None:intergenic 30.0%
ATCTTCAAAGAAATACCTGA+CGG + chr5_2:16700278-16700297 None:intergenic 30.0%
!!! TTCTTTGAAGATTTTCGAGT+CGG - chr5_2:16700286-16700305 Msa0760250:intron 30.0%
GCATAACTTTGATGTTATTC+CGG + chr5_2:16700698-16700717 None:intergenic 30.0%
TATTCTCATAATCACGGATT+AGG - chr5_2:16700756-16700775 Msa0760250:intron 30.0%
!! AAGGAACTTAGTTTTTGAGA+TGG - chr5_2:16700941-16700960 Msa0760250:five_prime_UTR 30.0%
! CAGGTAGTGATCATTTTACA+TGG - chr5_2:16696543-16696562 Msa0760250:CDS 35.0%
!!! GGTTCCACTTTTTTTTGAAG+AGG - chr5_2:16696670-16696689 Msa0760250:intron 35.0%
AGAGGCAAAATTGATCTTAG+AGG - chr5_2:16696688-16696707 Msa0760250:intron 35.0%
! TCATGTGAAAGTGAGTTGAA+TGG + chr5_2:16696845-16696864 None:intergenic 35.0%
!!! AGTGTTTTTTGGTGCCATTT+TGG - chr5_2:16696965-16696984 Msa0760250:CDS 35.0%
GGAAGAGACAAAATTGGTTA+TGG - chr5_2:16696986-16697005 Msa0760250:CDS 35.0%
! TGAGTTGAACAATAAAGTCG+AGG + chr5_2:16697113-16697132 None:intergenic 35.0%
! TGGTTCTGCGTTGATAAAAA+TGG + chr5_2:16697226-16697245 None:intergenic 35.0%
CATGATTGAACTTATGGTGT+CGG - chr5_2:16697273-16697292 Msa0760250:intron 35.0%
GTGAACAATTCACAAGTCTA+AGG + chr5_2:16697307-16697326 None:intergenic 35.0%
CAGTCTATACTTAGACAGTT+GGG - chr5_2:16697415-16697434 Msa0760250:intron 35.0%
AAATGCTGTAAACGTCACAT+TGG + chr5_2:16697608-16697627 None:intergenic 35.0%
CTAAGGACTGTTGTAAGTAT+GGG - chr5_2:16697795-16697814 Msa0760250:intron 35.0%
CGGTAACTCATACGATATAT+TGG - chr5_2:16697874-16697893 Msa0760250:intron 35.0%
! TAGGTGATCAGGTAATCTTT+TGG - chr5_2:16697927-16697946 Msa0760250:intron 35.0%
! AGGTGATCAGGTAATCTTTT+GGG - chr5_2:16697928-16697947 Msa0760250:intron 35.0%
TTGTGCCTAATCTGATTTAC+TGG - chr5_2:16698071-16698090 Msa0760250:intron 35.0%
GATAGCCAGTAAATCAGATT+AGG + chr5_2:16698079-16698098 None:intergenic 35.0%
GGGTGAATGTTATTGTTGAT+TGG + chr5_2:16698178-16698197 None:intergenic 35.0%
AAACTTCGTCAAGAAGTAGA+AGG - chr5_2:16698209-16698228 Msa0760250:intron 35.0%
GTAGTAATTTACTGCCACAA+TGG - chr5_2:16698236-16698255 Msa0760250:intron 35.0%
!!! TGAGTGGAGTTTTTTACCTT+TGG - chr5_2:16698641-16698660 Msa0760250:intron 35.0%
AAGTCAAATCAGCAACCAAT+GGG + chr5_2:16698766-16698785 None:intergenic 35.0%
AAAGTCAAATCAGCAACCAA+TGG + chr5_2:16698767-16698786 None:intergenic 35.0%
AAATCTTCACGCTAAATGCA+GGG - chr5_2:16699057-16699076 Msa0760250:intron 35.0%
TCTAGATAAACTACATGCTG+AGG - chr5_2:16699382-16699401 Msa0760250:CDS 35.0%
TTGTAACCTGTACCTTTCAT+CGG - chr5_2:16699527-16699546 Msa0760250:intron 35.0%
! GGTTGATTATGTTCCTCTTT+TGG + chr5_2:16699620-16699639 None:intergenic 35.0%
GGATTAACTTTCTCATTTGC+AGG + chr5_2:16699641-16699660 None:intergenic 35.0%
! CAAAAAAGTATGTGCCCATT+TGG + chr5_2:16699691-16699710 None:intergenic 35.0%
! GACAAATCTTGGTGCAAAAA+AGG - chr5_2:16700079-16700098 Msa0760250:intron 35.0%
AAATGGATGTATGACCTACA+AGG + chr5_2:16700202-16700221 None:intergenic 35.0%
!!! AAGATTTTCGAGTCGGTATA+TGG - chr5_2:16700293-16700312 Msa0760250:intron 35.0%
TCAACAGTAACTCTATTTGG+TGG + chr5_2:16700391-16700410 None:intergenic 35.0%
CATCAAAGTTATGCCAACAT+TGG - chr5_2:16700704-16700723 Msa0760250:CDS 35.0%
CCTAATCAAAAGACCAATGT+TGG + chr5_2:16700720-16700739 None:intergenic 35.0%
!!! CCAACATTGGTCTTTTGATT+AGG - chr5_2:16700717-16700736 Msa0760250:CDS 35.0%
!!! ATTGGTCTTTTGATTAGGTG+CGG - chr5_2:16700722-16700741 Msa0760250:CDS 35.0%
!! TTTGATTTGCTTAAGCCCTT+AGG - chr5_2:16700911-16700930 Msa0760250:five_prime_UTR 35.0%
!! TTGATTTGCTTAAGCCCTTA+GGG - chr5_2:16700912-16700931 Msa0760250:five_prime_UTR 35.0%
AGTTCCTTAGATAACCCTAA+GGG + chr5_2:16700929-16700948 None:intergenic 35.0%
AAGTTCCTTAGATAACCCTA+AGG + chr5_2:16700930-16700949 None:intergenic 35.0%
AGAGAGCGAGAAGTTTCTAA+CGG + chr5_2:16696310-16696329 None:intergenic 40.0%
GAAGCAAGCTAGTAGATTGA+GGG - chr5_2:16696500-16696519 Msa0760250:three_prime_UTR 40.0%
ACAAGTTGCCAAACAACAAC+AGG - chr5_2:16696524-16696543 Msa0760250:CDS 40.0%
! GATCACTACCTGTTGTTGTT+TGG + chr5_2:16696535-16696554 None:intergenic 40.0%
GCAGTCTATACTTAGACAGT+TGG - chr5_2:16697414-16697433 Msa0760250:intron 40.0%
CACTTCTACAAAGACTGCTA+AGG - chr5_2:16697510-16697529 Msa0760250:intron 40.0%
! GACGTTTACAGCATTTTCAG+CGG - chr5_2:16697612-16697631 Msa0760250:CDS 40.0%
! ATTTTCAGCGGCATATCGTT+CGG - chr5_2:16697624-16697643 Msa0760250:CDS 40.0%
TTCTGTTAGTTCCAAGCAGA+TGG - chr5_2:16697664-16697683 Msa0760250:intron 40.0%
GTATACTTCAGTGAGGAAGT+TGG - chr5_2:16697772-16697791 Msa0760250:intron 40.0%
GCTAAGGACTGTTGTAAGTA+TGG - chr5_2:16697794-16697813 Msa0760250:intron 40.0%
!! TTGAAGAGAAGCACTTGCAA+GGG + chr5_2:16697852-16697871 None:intergenic 40.0%
!! ATTGAAGAGAAGCACTTGCA+AGG + chr5_2:16697853-16697872 None:intergenic 40.0%
GCAAGTGCTTCTCTTCAATT+CGG - chr5_2:16697854-16697873 Msa0760250:CDS 40.0%
AATGAAAGGGAGACTTTGCT+TGG - chr5_2:16697899-16697918 Msa0760250:intron 40.0%
ATGAAAGGGAGACTTTGCTT+GGG - chr5_2:16697900-16697919 Msa0760250:intron 40.0%
! GGTGATCAGGTAATCTTTTG+GGG - chr5_2:16697929-16697948 Msa0760250:intron 40.0%
TTCTTCGATACTCTTCAGTG+TGG - chr5_2:16697955-16697974 Msa0760250:intron 40.0%
! CTGATTTACTGGCTATCTTG+TGG - chr5_2:16698082-16698101 Msa0760250:intron 40.0%
ACGAAGTTTGTCGTAGTTGT+GGG + chr5_2:16698198-16698217 None:intergenic 40.0%
TGTGGCAGTAAATTACTACC+TGG + chr5_2:16698235-16698254 None:intergenic 40.0%
ATACCATTGTAGAAAGGCTC+TGG + chr5_2:16698499-16698518 None:intergenic 40.0%
TGAACCACGATTAACCTCAT+AGG + chr5_2:16698615-16698634 None:intergenic 40.0%
CCTATCGAGTTACACCTATT+GGG + chr5_2:16698677-16698696 None:intergenic 40.0%
CCAATAGGTGTAACTCGATA+GGG - chr5_2:16698675-16698694 Msa0760250:intron 40.0%
AGTCAAATCAGCAACCAATG+GGG + chr5_2:16698765-16698784 None:intergenic 40.0%
! TTTCTTGTTTGTCACTGGCA+AGG - chr5_2:16698922-16698941 Msa0760250:intron 40.0%
CACAGTCAATCTGTCCATTA+GGG - chr5_2:16699009-16699028 Msa0760250:CDS 40.0%
GAAATCTTCACGCTAAATGC+AGG - chr5_2:16699056-16699075 Msa0760250:intron 40.0%
!! CTATTGTACATGTTGGCTTC+TGG - chr5_2:16699466-16699485 Msa0760250:intron 40.0%
TACCTTTCATCGGATGTTCT+TGG - chr5_2:16699537-16699556 Msa0760250:CDS 40.0%
GGAAATGATGTAGAGTCTTG+TGG + chr5_2:16699593-16699612 None:intergenic 40.0%
ATCATTTCCACTGCCAAAAG+AGG - chr5_2:16699604-16699623 Msa0760250:intron 40.0%
! TTATGTTCCTCTTTTGGCAG+TGG + chr5_2:16699614-16699633 None:intergenic 40.0%
!!! GGGCACATACTTTTTTGCAA+AGG - chr5_2:16699694-16699713 Msa0760250:intron 40.0%
AACAGTCAACTGCAGGAATA+TGG + chr5_2:16699777-16699796 None:intergenic 40.0%
! ATCCAGCTACCTCTTTTACA+TGG - chr5_2:16699986-16700005 Msa0760250:intron 40.0%
! TCCAGCTACCTCTTTTACAT+GGG - chr5_2:16699987-16700006 Msa0760250:intron 40.0%
!! CTCATCTTGATTTGCCTTGT+AGG - chr5_2:16700185-16700204 Msa0760250:intron 40.0%
CATTTGATGCTCAAGCTGAA+GGG - chr5_2:16700217-16700236 Msa0760250:intron 40.0%
ATTTGATGCTCAAGCTGAAG+GGG - chr5_2:16700218-16700237 Msa0760250:intron 40.0%
CTGGAAATTCAACCACCAAA+AGG + chr5_2:16700573-16700592 None:intergenic 40.0%
!! CTTTTGGTGGTTGAATTTCC+AGG - chr5_2:16700571-16700590 Msa0760250:intron 40.0%
TGGTCTGAAGGAGAATTCAA+TGG - chr5_2:16700608-16700627 Msa0760250:intron 40.0%
AATTCAATGGCAATGCTGGA+TGG - chr5_2:16700621-16700640 Msa0760250:intron 40.0%
TGTCTCTGTACATAAGCAGA+GGG + chr5_2:16700650-16700669 None:intergenic 40.0%
TAAGCCCTTAGGGTTATCTA+AGG - chr5_2:16700922-16700941 Msa0760250:five_prime_UTR 40.0%
TTTGAGAGTAGCACCAGACA+CGG + chr5_2:16696191-16696210 None:intergenic 45.0%
GTTAGAAACTTCTCGCTCTC+TGG - chr5_2:16696309-16696328 Msa0760250:three_prime_UTR 45.0%
TCTGGAAAGTCCCAGGTATA+AGG - chr5_2:16696327-16696346 Msa0760250:three_prime_UTR 45.0%
GGAAGCAAGCTAGTAGATTG+AGG - chr5_2:16696499-16696518 Msa0760250:three_prime_UTR 45.0%
TAAGCAAGTGTTCGGTTCTG+CGG + chr5_2:16696946-16696965 None:intergenic 45.0%
AACAAGCCTTAGCGTGTGTT+TGG + chr5_2:16697246-16697265 None:intergenic 45.0%
TGAGCGGTTCATTGCTAAGT+TGG + chr5_2:16697441-16697460 None:intergenic 45.0%
ACTTAGCAATGAACCGCTCA+TGG - chr5_2:16697441-16697460 Msa0760250:intron 45.0%
TCAGATTCATCAGCCATGAG+CGG + chr5_2:16697457-16697476 None:intergenic 45.0%
! TTTTCAGCGGCATATCGTTC+GGG - chr5_2:16697625-16697644 Msa0760250:CDS 45.0%
AGTTCCAAGCAGATGGAGAT+AGG - chr5_2:16697671-16697690 Msa0760250:intron 45.0%
TTCAGTGAGGAAGTTGGCTA+AGG - chr5_2:16697778-16697797 Msa0760250:intron 45.0%
!! TGAAGAGAAGCACTTGCAAG+GGG + chr5_2:16697851-16697870 None:intergenic 45.0%
GAGACTTTGCTTGGGATCTT+AGG - chr5_2:16697908-16697927 Msa0760250:intron 45.0%
GACGAAGTTTGTCGTAGTTG+TGG + chr5_2:16698199-16698218 None:intergenic 45.0%
! ATCAGGCTGCTGAAGTTTTG+AGG - chr5_2:16698309-16698328 Msa0760250:intron 45.0%
TTTCTGCAGAGAGTTCCATG+AGG - chr5_2:16698360-16698379 Msa0760250:intron 45.0%
!! TTCTGCATTCTGAAGCCTCA+TGG + chr5_2:16698378-16698397 None:intergenic 45.0%
AGAGCATAAATCTGCCCTTG+TGG - chr5_2:16698409-16698428 Msa0760250:intron 45.0%
TTCTCTACCAAGTGCCACAA+GGG + chr5_2:16698426-16698445 None:intergenic 45.0%
TCTCCAGAGCCTTTCTACAA+TGG - chr5_2:16698493-16698512 Msa0760250:intron 45.0%
TCGTGGTTCAACTGTTTGAG+TGG - chr5_2:16698625-16698644 Msa0760250:intron 45.0%
ATCGAGTTACACCTATTGGG+AGG + chr5_2:16698674-16698693 None:intergenic 45.0%
CCCAATAGGTGTAACTCGAT+AGG - chr5_2:16698674-16698693 Msa0760250:intron 45.0%
CCCTATCGAGTTACACCTAT+TGG + chr5_2:16698678-16698697 None:intergenic 45.0%
AATAACTTCCCCCTGAAAGG+AGG + chr5_2:16698727-16698746 None:intergenic 45.0%
GGAAATAACTTCCCCCTGAA+AGG + chr5_2:16698730-16698749 None:intergenic 45.0%
! CCTAATGGACAGATTGACTG+TGG + chr5_2:16699011-16699030 None:intergenic 45.0%
CCACAGTCAATCTGTCCATT+AGG - chr5_2:16699008-16699027 Msa0760250:CDS 45.0%
TTCACGCTAAATGCAGGGTT+CGG - chr5_2:16699062-16699081 Msa0760250:intron 45.0%
!!! TTTTTTTGTTTGGGGGAGGG+AGG + chr5_2:16699280-16699299 None:intergenic 45.0%
! AAAAGGGGGCACAAAAGGAA+AGG + chr5_2:16699316-16699335 None:intergenic 45.0%
! TTTCCTTTTGTGCCCCCTTT+TGG - chr5_2:16699315-16699334 Msa0760250:CDS 45.0%
! ATGCTGAGAGAGCTTTTCAC+CGG - chr5_2:16699345-16699364 Msa0760250:CDS 45.0%
! CTAGAATAACAAGGGCATGC+CGG + chr5_2:16699367-16699386 None:intergenic 45.0%
! GAACATCCGATGAAAGGTAC+AGG + chr5_2:16699536-16699555 None:intergenic 45.0%
CTCCAAGAACATCCGATGAA+AGG + chr5_2:16699542-16699561 None:intergenic 45.0%
CTTGATCAACAGTCAACTGC+AGG + chr5_2:16699784-16699803 None:intergenic 45.0%
TCCCATGTAAAAGAGGTAGC+TGG + chr5_2:16699991-16700010 None:intergenic 45.0%
TTCTGCGTCCCATGTAAAAG+AGG + chr5_2:16699998-16700017 None:intergenic 45.0%
CCTTCAGCTTGAGCATCAAA+TGG + chr5_2:16700219-16700238 None:intergenic 45.0%
CCATTTGATGCTCAAGCTGA+AGG - chr5_2:16700216-16700235 Msa0760250:intron 45.0%
CGATTATGTTGTAGTCCGTC+AGG - chr5_2:16700260-16700279 Msa0760250:intron 45.0%
GCAAGTCAAATCAGCTAGAC+TGG + chr5_2:16700539-16700558 None:intergenic 45.0%
AATTTCCAGGTTGCTGCCAA+TGG - chr5_2:16700584-16700603 Msa0760250:intron 45.0%
TTCTCCTTCAGACCATCCAT+TGG + chr5_2:16700603-16700622 None:intergenic 45.0%
GGAGAATTCAATGGCAATGC+TGG - chr5_2:16700617-16700636 Msa0760250:intron 45.0%
CTGTCTCTGTACATAAGCAG+AGG + chr5_2:16700651-16700670 None:intergenic 45.0%
CTCTGCTTATGTACAGAGAC+AGG - chr5_2:16700649-16700668 Msa0760250:intron 45.0%
AGTACCAGCGAACAAGATAC+CGG - chr5_2:16700676-16700695 Msa0760250:intron 45.0%
TATTCCGGTATCTTGTTCGC+TGG + chr5_2:16700683-16700702 None:intergenic 45.0%
!!! AAATAATTTTTTTTTTGTTT+GGG + chr5_2:16699289-16699308 None:intergenic 5.0%
!!! AAAATAATTTTTTTTTTGTT+TGG + chr5_2:16699290-16699309 None:intergenic 5.0%
GCAGAACCAAACACACGCTA+AGG - chr5_2:16697237-16697256 Msa0760250:intron 50.0%
TTTCAGCGGCATATCGTTCG+GGG - chr5_2:16697626-16697645 Msa0760250:CDS 50.0%
GTCACCTATCTCCATCTGCT+TGG + chr5_2:16697678-16697697 None:intergenic 50.0%
GGGACTGAGAATGACAACCA+AGG - chr5_2:16697815-16697834 Msa0760250:intron 50.0%
CAAGGGGGTAAGTACTACCT+TGG + chr5_2:16697835-16697854 None:intergenic 50.0%
!! GAAGAGAAGCACTTGCAAGG+GGG + chr5_2:16697850-16697869 None:intergenic 50.0%
GCTTGGGATCTTAGGTGATC+AGG - chr5_2:16697916-16697935 Msa0760250:intron 50.0%
TCGTCAAGAAGTAGAAGGCC+AGG - chr5_2:16698214-16698233 Msa0760250:intron 50.0%
CTGCCACAATGGCATGCATA+TGG - chr5_2:16698247-16698266 Msa0760250:intron 50.0%
CCACCATATGCATGCCATTG+TGG + chr5_2:16698253-16698272 None:intergenic 50.0%
CCACAATGGCATGCATATGG+TGG - chr5_2:16698250-16698269 Msa0760250:intron 50.0%
!! TGAGGCGTCGATCAAAGTTG+AGG - chr5_2:16698327-16698346 Msa0760250:intron 50.0%
!! GAGGCGTCGATCAAAGTTGA+GGG - chr5_2:16698328-16698347 Msa0760250:intron 50.0%
AAATCTGCCCTTGTGGCACT+TGG - chr5_2:16698416-16698435 Msa0760250:intron 50.0%
CTTCTCTACCAAGTGCCACA+AGG + chr5_2:16698427-16698446 None:intergenic 50.0%
TGCTGCTATGTCGTCAGTTG+AGG - chr5_2:16698451-16698470 Msa0760250:intron 50.0%
GAGTGTCAAAAGCTCTCGGT+TGG + chr5_2:16698591-16698610 None:intergenic 50.0%
AGGCGAGTGTCAAAAGCTCT+CGG + chr5_2:16698595-16698614 None:intergenic 50.0%
! GCTTTTGACACTCGCCTATG+AGG - chr5_2:16698598-16698617 Msa0760250:intron 50.0%
CTCGCCTATGAGGTTAATCG+TGG - chr5_2:16698608-16698627 Msa0760250:intron 50.0%
ATTGGGAGGCTGAGAACCAA+AGG + chr5_2:16698660-16698679 None:intergenic 50.0%
! TTGGTTCTCAGCCTCCCAAT+AGG - chr5_2:16698660-16698679 Msa0760250:intron 50.0%
ACTCGCGTTCTACACCCTAA+TGG + chr5_2:16699026-16699045 None:intergenic 50.0%
TCAGCATCCACCTGCCAAAA+GGG + chr5_2:16699332-16699351 None:intergenic 50.0%
!! CATATCGTTCGGGGCGTTGA+AGG - chr5_2:16697635-16697654 Msa0760250:CDS 55.0%
GATTCGAACCCAGATTCCCC+AGG - chr5_2:16698697-16698716 Msa0760250:intron 55.0%
GAGGAGAACCTGGGGAATCT+GGG + chr5_2:16698708-16698727 None:intergenic 55.0%
CCTGAAAGGAGGAGAACCTG+GGG + chr5_2:16698716-16698735 None:intergenic 55.0%
CCCTGAAAGGAGGAGAACCT+GGG + chr5_2:16698717-16698736 None:intergenic 55.0%
CCCAGGTTCTCCTCCTTTCA+GGG - chr5_2:16698714-16698733 Msa0760250:CDS 55.0%
CCAGGTTCTCCTCCTTTCAG+GGG - chr5_2:16698715-16698734 Msa0760250:CDS 55.0%
CAGGTTCTCCTCCTTTCAGG+GGG - chr5_2:16698716-16698735 Msa0760250:CDS 55.0%
! CCAATGGGGTGTTTGTCGAG+TGG + chr5_2:16698751-16698770 None:intergenic 55.0%
CCACTCGACAAACACCCCAT+TGG - chr5_2:16698748-16698767 Msa0760250:CDS 55.0%
! CTGCCAAAAGGGGGCACAAA+AGG + chr5_2:16699321-16699340 None:intergenic 55.0%
! CTTTTGTGCCCCCTTTTGGC+AGG - chr5_2:16699319-16699338 Msa0760250:CDS 55.0%
AGCATCCACCTGCCAAAAGG+GGG + chr5_2:16699330-16699349 None:intergenic 55.0%
CAGCATCCACCTGCCAAAAG+GGG + chr5_2:16699331-16699350 None:intergenic 55.0%
CTCAGCATCCACCTGCCAAA+AGG + chr5_2:16699333-16699352 None:intergenic 55.0%
TCCAGGTTGCTGCCAATGGA+TGG - chr5_2:16700588-16700607 Msa0760250:intron 55.0%
ACCATCCATTGGCAGCAACC+TGG + chr5_2:16700592-16700611 None:intergenic 55.0%
GCTGCCAATGGATGGTCTGA+AGG - chr5_2:16700596-16700615 Msa0760250:intron 55.0%
GTCAAGCTCGTGTCCGTGTC+TGG - chr5_2:16696175-16696194 Msa0760250:three_prime_UTR 60.0%
! CTCGCTCTCTGGAAAGTCCC+AGG - chr5_2:16696320-16696339 Msa0760250:three_prime_UTR 60.0%
GGAGGAGAACCTGGGGAATC+TGG + chr5_2:16698709-16698728 None:intergenic 60.0%
CCCCAGGTTCTCCTCCTTTC+AGG - chr5_2:16698713-16698732 Msa0760250:CDS 60.0%
CCCCTGAAAGGAGGAGAACC+TGG + chr5_2:16698718-16698737 None:intergenic 60.0%
! TTGTGCCCCCTTTTGGCAGG+TGG - chr5_2:16699322-16699341 Msa0760250:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 16696174 16701053 16696174 ID=Msa0760250;Name=Msa0760250
chr5_2 mRNA 16696174 16701053 16696174 ID=Msa0760250-mRNA-1;Parent=Msa0760250;Name=Msa0760250-mRNA-1;_AED=0.15;_eAED=0.15;_QI=194|0.8|0.90|1|0.7|0.72|11|350|374
chr5_2 exon 16696174 16696634 16696174 ID=Msa0760250-mRNA-1:exon:7415;Parent=Msa0760250-mRNA-1
chr5_2 exon 16696946 16697020 16696946 ID=Msa0760250-mRNA-1:exon:7414;Parent=Msa0760250-mRNA-1
chr5_2 exon 16697512 16697661 16697512 ID=Msa0760250-mRNA-1:exon:7413;Parent=Msa0760250-mRNA-1
chr5_2 exon 16697824 16697886 16697824 ID=Msa0760250-mRNA-1:exon:7412;Parent=Msa0760250-mRNA-1
chr5_2 exon 16698713 16698913 16698713 ID=Msa0760250-mRNA-1:exon:7411;Parent=Msa0760250-mRNA-1
chr5_2 exon 16698945 16699070 16698945 ID=Msa0760250-mRNA-1:exon:7410;Parent=Msa0760250-mRNA-1
chr5_2 exon 16699290 16699444 16699290 ID=Msa0760250-mRNA-1:exon:7409;Parent=Msa0760250-mRNA-1
chr5_2 exon 16699535 16699604 16699535 ID=Msa0760250-mRNA-1:exon:7408;Parent=Msa0760250-mRNA-1
chr5_2 exon 16699696 16699809 16699696 ID=Msa0760250-mRNA-1:exon:7407;Parent=Msa0760250-mRNA-1
chr5_2 exon 16700682 16700767 16700682 ID=Msa0760250-mRNA-1:exon:7406;Parent=Msa0760250-mRNA-1
chr5_2 exon 16700886 16701053 16700886 ID=Msa0760250-mRNA-1:exon:7405;Parent=Msa0760250-mRNA-1
chr5_2 five_prime_UTR 16700886 16701053 16700886 ID=Msa0760250-mRNA-1:five_prime_utr;Parent=Msa0760250-mRNA-1
chr5_2 five_prime_UTR 16700742 16700767 16700742 ID=Msa0760250-mRNA-1:five_prime_utr;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16700682 16700741 16700682 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16699696 16699809 16699696 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16699535 16699604 16699535 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16699290 16699444 16699290 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16698945 16699070 16698945 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16698713 16698913 16698713 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16697824 16697886 16697824 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16697512 16697661 16697512 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16696946 16697020 16696946 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 CDS 16696524 16696634 16696524 ID=Msa0760250-mRNA-1:cds;Parent=Msa0760250-mRNA-1
chr5_2 three_prime_UTR 16696174 16696523 16696174 ID=Msa0760250-mRNA-1:three_prime_utr;Parent=Msa0760250-mRNA-1
Gene Sequence

>Msa0760250

ATGGATGCTATAAGGAAGCAAGCTAGTAGATTGAGGGAACAAGTTGCCAAACAACAACAGTCTATACTTAGACAGTTGGGCCAACTTAGCAATGAACCGCTCATGGCTGATGAATCTGAACTTGAATGTTTTCATAAACTTCAAAAGTTATACACTTCTACAAAGACTGCTAAGCATTTTCAGCGGCATATCGTTCGGGGCGTTGAAGGATTAATTTCTGTTAGTTCCAAGCAGATGGAGATAGTGAGGAAGTTGGCTAAGGACTGTTGTAAGTATGGGACTGAGAATGACAACCAAGGTAGTACTTACCCCCTTGCAAGTGCTTCTCTTCAATTCGGTAACTCATACGATATATTGGAAAATGAAAGGGAGACTTTGCTTGGGATCTTAGGTGATCAGATCAACTTAAGAGAAGTACCAATCAACAATAACATTCACCCACAACTACGACAAACTTCGTCAAGAAGTAGAAGGCCAGGTAGTAATTTACTGCCACAATGGCATGCATATGGTGGTGTGCAATGCGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATTCTTCTCTTTCTGCAGAGAGTTCCATGAGGCTTCAGAATGCAGAAAAAAAGTTGAAAGAGCATAAATCTGCCCTTGTGGCACTTGGTAGAGAAGCAACTGCTGCTATGTCGTCAGTTGAGGAACAACAGCAACATATAACTCTCCAGAGCCTTTCTACAATGGTGGATGCTGAGAGAGCTTTTCACCGGCATGCCCTTGTTATTCTAGATAAACTACATGCTGAGATGATCATGATTGATGAGAGACAACCACAAGACTCTACATCATTTCCACTGCCAAAAGAGGAACATAATCAACCTGCAAATGAGAAAGTTAATCCAAATGGCATTCGTTATAAACATAACACCCAAATGGGCACATACTTTTTTGCAAAGGTCATACATCCATTTGATGCTCAAGCTGAAGGGGAGTTAAGTTTATCAGTTGACGATTATGTTGTAGTCCGTCAGGTTGCTGCCAATGGATGGTCTGAAGGAGAATTCAATGGCAATGCTGGATGGTTTCCCTCTGCTTATGTACAGAGACAGGACGTAGTACCAGCGAACAAGATACCGGAATAA

Protein sequence

>Msa0760250

MDAIRKQASRLREQVAKQQQSILRQLGQLSNEPLMADESELECFHKLQKLYTSTKTAKHFQRHIVRGVEGLISVSSKQMEIVRKLAKDCCKYGTENDNQGSTYPLASASLQFGNSYDILENERETLLGILGDQINLREVPINNNIHPQLRQTSSRSRRPGSNLLPQWHAYGGVQCAAEVLRRRSKLRDSSLSAESSMRLQNAEKKLKEHKSALVALGREATAAMSSVEEQQQHITLQSLSTMVDAERAFHRHALVILDKLHAEMIMIDERQPQDSTSFPLPKEEHNQPANEKVNPNGIRYKHNTQMGTYFFAKVIHPFDAQAEGELSLSVDDYVVVRQVAANGWSEGEFNGNAGWFPSAYVQRQDVVPANKIPE*