Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188970 | XP_003594125.1 | 97.611 | 293 | 7 | 0 | 1 | 293 | 1 | 293 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188970 | sp|Q0WL80|UGGG_ARATH | 49.231 | 195 | 28 | 5 | 292 | 416 | 1397 | 1590 | 5.42e-39 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188970 | A2Q224 | 97.611 | 293 | 7 | 0 | 1 | 293 | 1 | 293 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0073270 | Msa0188970 | 0.806850 | 6.732504e-50 | -8.615850e-47 |
| Msa0125860 | Msa0188970 | 0.801136 | 1.038238e-48 | -8.615850e-47 |
| Msa0138830 | Msa0188970 | 0.805510 | 1.289328e-49 | -8.615850e-47 |
| Msa0138840 | Msa0188970 | 0.803077 | 4.140819e-49 | -8.615850e-47 |
| Msa0138850 | Msa0188970 | 0.801501 | 8.739120e-49 | -8.615850e-47 |
| Msa0138870 | Msa0188970 | 0.805497 | 1.297222e-49 | -8.615850e-47 |
| Msa0143830 | Msa0188970 | 0.804095 | 2.545826e-49 | -8.615850e-47 |
| Msa0188970 | Msa0210790 | 0.858881 | 6.074960e-63 | -8.615850e-47 |
| Msa0188970 | Msa0210850 | 0.844024 | 9.766720e-59 | -8.615850e-47 |
| Msa0188970 | Msa0251120 | 0.843541 | 1.314880e-58 | -8.615850e-47 |
| Msa0188970 | Msa0327890 | 0.800198 | 1.612760e-48 | -8.615850e-47 |
| Msa0188970 | Msa0349910 | 0.816937 | 4.273225e-52 | -8.615850e-47 |
| Msa0188970 | Msa0390790 | 0.802249 | 6.135936e-49 | -8.615850e-47 |
| Msa0188970 | Msa0491770 | 0.815078 | 1.111351e-51 | -8.615850e-47 |
| Msa0188970 | Msa0537210 | 0.831844 | 1.325912e-55 | -8.615850e-47 |
| Msa0188970 | Msa0566460 | 0.805861 | 1.088274e-49 | -8.615850e-47 |
| Msa0188970 | Msa0576500 | -0.814681 | 1.360922e-51 | -8.615850e-47 |
| Msa0188970 | Msa0580380 | 0.820591 | 6.326593e-53 | -8.615850e-47 |
| Msa0188970 | Msa0584370 | 0.803442 | 3.479798e-49 | -8.615850e-47 |
| Msa0188970 | Msa0584970 | 0.806030 | 1.002337e-49 | -8.615850e-47 |
| Msa0188970 | Msa0686020 | 0.821057 | 4.941762e-53 | -8.615850e-47 |
| Msa0188970 | Msa0707880 | -0.806887 | 6.612565e-50 | -8.615850e-47 |
| Msa0188970 | Msa0751970 | 0.804784 | 1.829520e-49 | -8.615850e-47 |
| Msa0188970 | Msa0789220 | 0.810545 | 1.092749e-50 | -8.615850e-47 |
| Msa0188970 | Msa0795880 | 0.802889 | 4.527239e-49 | -8.615850e-47 |
| Msa0188970 | Msa0871420 | 0.830778 | 2.425013e-55 | -8.615850e-47 |
| Msa0188970 | Msa0874750 | 0.807074 | 6.037612e-50 | -8.615850e-47 |
| Msa0188970 | Msa0936630 | 0.805314 | 1.417174e-49 | -8.615850e-47 |
| Msa0188970 | Msa0973770 | 0.816807 | 4.570878e-52 | -8.615850e-47 |
| Msa0188970 | Msa1076830 | 0.806861 | 6.697684e-50 | -8.615850e-47 |
| Msa0188970 | Msa1132850 | 0.802586 | 5.228642e-49 | -8.615850e-47 |
| Msa0188970 | Msa1150750 | 0.810726 | 9.985468e-51 | -8.615850e-47 |
| Msa0188970 | Msa1165660 | 0.801083 | 1.064436e-48 | -8.615850e-47 |
| Msa0188970 | Msa1218190 | 0.810320 | 1.222068e-50 | -8.615850e-47 |
| Msa0188970 | Msa1275220 | 0.807358 | 5.256833e-50 | -8.615850e-47 |
| Msa0188970 | Msa1376070 | 0.811947 | 5.425184e-51 | -8.615850e-47 |
| Msa0188970 | Msa1377520 | 0.806233 | 9.086599e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188970 | MtrunA17_Chr2g0287431 | 97.611 | 293 | 7 | 0 | 1 | 293 | 1 | 293 | 0.0 | 588 |
| Msa0188970 | MtrunA17_Chr1g0210731 | 53.289 | 304 | 134 | 6 | 6 | 302 | 3 | 305 | 4.22e-100 | 300 |
| Msa0188970 | MtrunA17_Chr1g0210721 | 44.257 | 296 | 153 | 3 | 1 | 292 | 1 | 288 | 9.99e-79 | 245 |
| Msa0188970 | MtrunA17_Chr2g0277801 | 58.376 | 197 | 16 | 3 | 292 | 422 | 1423 | 1619 | 2.70e-54 | 194 |
| Msa0188970 | MtrunA17_Chr4g0033971 | 35.531 | 273 | 156 | 5 | 1 | 262 | 1 | 264 | 6.27e-46 | 160 |
| Msa0188970 | MtrunA17_Chr8g0369411 | 30.916 | 262 | 162 | 8 | 1 | 251 | 1 | 254 | 9.25e-32 | 122 |
| Msa0188970 | MtrunA17_Chr5g0409571 | 25.641 | 273 | 191 | 5 | 1 | 268 | 1 | 266 | 1.44e-27 | 110 |
| Msa0188970 | MtrunA17_Chr8g0369401 | 33.784 | 148 | 82 | 4 | 124 | 269 | 29 | 162 | 4.69e-15 | 72.8 |
| Msa0188970 | MtrunA17_Chr7g0227861 | 25.521 | 192 | 124 | 4 | 129 | 310 | 106 | 288 | 1.44e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188970 | AT1G55230.1 | 60.000 | 295 | 114 | 3 | 1 | 293 | 1 | 293 | 2.34e-124 | 362 |
| Msa0188970 | AT1G55240.1 | 57.516 | 306 | 126 | 3 | 1 | 303 | 1 | 305 | 5.26e-120 | 352 |
| Msa0188970 | AT5G19870.1 | 57.762 | 277 | 115 | 2 | 1 | 276 | 1 | 276 | 1.38e-105 | 314 |
| Msa0188970 | AT1G71220.2 | 49.231 | 195 | 28 | 5 | 292 | 416 | 1398 | 1591 | 5.26e-40 | 153 |
| Msa0188970 | AT1G71220.1 | 49.231 | 195 | 28 | 5 | 292 | 416 | 1397 | 1590 | 5.51e-40 | 153 |
| Msa0188970 | AT1G71220.3 | 49.231 | 195 | 28 | 5 | 292 | 416 | 1435 | 1628 | 5.55e-40 | 153 |
| Msa0188970 | AT1G49470.1 | 33.108 | 296 | 177 | 7 | 1 | 284 | 1 | 287 | 6.11e-40 | 145 |
| Msa0188970 | AT1G32127.2 | 30.213 | 235 | 148 | 6 | 1 | 227 | 1 | 227 | 7.66e-29 | 114 |
| Msa0188970 | AT1G32127.1 | 30.213 | 235 | 148 | 6 | 1 | 227 | 1 | 227 | 7.66e-29 | 114 |
Find 117 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTTCTCTTTAAGAATTT+TGG | 0.125524 | 2_1:-4204739 | Msa0188970:three_prime_UTR |
| CTCTCTTTCAACTACCCTTT+TGG | 0.147614 | 2_1:-4209702 | Msa0188970:CDS |
| TACATTACTTCTCTCTTTAA+TGG | 0.153471 | 2_1:-4204610 | Msa0188970:three_prime_UTR |
| TCCAAGTTGGCTAGACTATT+TGG | 0.173259 | 2_1:+4206067 | None:intergenic |
| ATACTAATTCATTGAGATTA+AGG | 0.186293 | 2_1:-4204580 | Msa0188970:three_prime_UTR |
| AGGTTTGTGGCTTATGGTTA+TGG | 0.202637 | 2_1:-4209618 | Msa0188970:CDS |
| CTTTCTTAATACTAGGATTA+TGG | 0.209091 | 2_1:-4210147 | Msa0188970:CDS |
| CTTATTTGCACCATAATATT+TGG | 0.212658 | 2_1:+4209409 | None:intergenic |
| GTTGGTGAAATGTAGGAATT+TGG | 0.216265 | 2_1:+4210088 | None:intergenic |
| CAAATATTATGGTGCAAATA+AGG | 0.263519 | 2_1:-4209408 | Msa0188970:CDS |
| TCAATGATTCGACCATTAAA+TGG | 0.275834 | 2_1:-4204530 | Msa0188970:three_prime_UTR |
| TAGGATTGTTCATGAGATTA+TGG | 0.289964 | 2_1:+4204664 | None:intergenic |
| AGATGGATGGATATCGGTTT+TGG | 0.294230 | 2_1:-4206449 | Msa0188970:CDS |
| AAATTCACTGCACGAATATT+AGG | 0.312650 | 2_1:-4205058 | Msa0188970:CDS |
| CTCTATGACATGGATTTAAA+AGG | 0.314765 | 2_1:-4206512 | Msa0188970:CDS |
| TCCCTATTATTATCACAAAA+TGG | 0.327656 | 2_1:+4206471 | None:intergenic |
| AGAAGATGGTATTGTCCTTC+TGG | 0.334093 | 2_1:+4209746 | None:intergenic |
| GGTTTGTGGCTTATGGTTAT+GGG | 0.338589 | 2_1:-4209617 | Msa0188970:CDS |
| GTATCATGCAAACCATTTAA+TGG | 0.340546 | 2_1:+4204518 | None:intergenic |
| TGGAAGCTAGGAATTGTGTT+AGG | 0.349655 | 2_1:+4209825 | None:intergenic |
| GAGATTAAGGGCAAAATGAT+TGG | 0.355919 | 2_1:-4204567 | Msa0188970:three_prime_UTR |
| TCGAAGGGTTGGTGTCGGTC+GGG | 0.358375 | 2_1:+4209974 | None:intergenic |
| TCATATATGGGCACTCTTGT+AGG | 0.360041 | 2_1:-4210190 | None:intergenic |
| GTCGAATCCTTTGATTGGTC+AGG | 0.363168 | 2_1:+4205010 | None:intergenic |
| CACCCTTTGGCAATTAAACT+TGG | 0.365074 | 2_1:+4209578 | None:intergenic |
| CATTCACTGTTGTTAGTGTT+TGG | 0.366501 | 2_1:+4204772 | None:intergenic |
| GATTGGTCAGGGGATTGAAT+AGG | 0.379273 | 2_1:+4205022 | None:intergenic |
| CATTAGTCGAATCCTTTGAT+TGG | 0.382972 | 2_1:+4205005 | None:intergenic |
| AAGGTTCGGTATTTCTCGTT+GGG | 0.387451 | 2_1:-4209389 | Msa0188970:CDS |
| AGAATTCATAAAACACCCTT+TGG | 0.389849 | 2_1:+4209565 | None:intergenic |
| TACTAATTCATTGAGATTAA+GGG | 0.397200 | 2_1:-4204579 | Msa0188970:three_prime_UTR |
| TGGTTATGGGGTACATGCTT+TGG | 0.404676 | 2_1:-4209604 | Msa0188970:CDS |
| CTGTTGAGGCTAACATGATT+AGG | 0.407916 | 2_1:+4210026 | None:intergenic |
| TCCAAATAGTCTAGCCAACT+TGG | 0.409506 | 2_1:-4206068 | Msa0188970:CDS |
| ATCGAAGGGTTGGTGTCGGT+CGG | 0.417234 | 2_1:+4209973 | None:intergenic |
| CTCAACAGCTTCAATTTCAA+TGG | 0.417853 | 2_1:-4210011 | Msa0188970:CDS |
| CTCGCCTCCAAATCAAGGTC+TGG | 0.429456 | 2_1:+4205082 | None:intergenic |
| GTATTTCTCGTTGGGGATTG+AGG | 0.432650 | 2_1:-4209381 | Msa0188970:CDS |
| AATAAAGTTACACTATACTT+TGG | 0.437464 | 2_1:+4204634 | None:intergenic |
| CGAAGGGTTGGTGTCGGTCG+GGG | 0.438020 | 2_1:+4209975 | None:intergenic |
| CCACGAATCACAACTCTGCC+TGG | 0.442577 | 2_1:+4204931 | None:intergenic |
| GACTATTTGGATCCTTGCTA+AGG | 0.453173 | 2_1:+4206080 | None:intergenic |
| TGAGTGGCCAGACCTTGATT+TGG | 0.457261 | 2_1:-4205089 | Msa0188970:CDS |
| CGAACACGCTTTGATCTCCA+TGG | 0.460449 | 2_1:-4209912 | Msa0188970:CDS |
| TCACTGTTGTTAGTGTTTGG+AGG | 0.461905 | 2_1:+4204775 | None:intergenic |
| CAAGAACTTGCAAGAGAAGA+TGG | 0.478767 | 2_1:+4209732 | None:intergenic |
| TAGTCTAGCCAACTTGGATC+AGG | 0.479080 | 2_1:-4206062 | Msa0188970:intron |
| CTTGTAGGACATGTAGCTCC+TGG | 0.486072 | 2_1:-4210175 | Msa0188970:CDS |
| GATTGTTCCGTCTGTATCGA+AGG | 0.490701 | 2_1:+4209958 | None:intergenic |
| GAAGTTGTGGAGATGATATG+AGG | 0.499668 | 2_1:+4209934 | None:intergenic |
| GTGGCCAGACCTTGATTTGG+AGG | 0.502157 | 2_1:-4205086 | Msa0188970:CDS |
| AGAGTTCTCCCATGTCGGTC+CGG | 0.503977 | 2_1:+4206531 | None:intergenic |
| AAGTTCCGAGAGACTGCTGC+TGG | 0.505675 | 2_1:-4206130 | Msa0188970:CDS |
| TGATGATGTGGAGTCTCAAA+AGG | 0.507045 | 2_1:-4209327 | Msa0188970:intron |
| ATAGGGAGATGGATGGATAT+CGG | 0.507630 | 2_1:-4206455 | Msa0188970:CDS |
| TCGAATCCTTTGATTGGTCA+GGG | 0.510515 | 2_1:+4205011 | None:intergenic |
| TAAGGTTCGGTATTTCTCGT+TGG | 0.511002 | 2_1:-4209390 | Msa0188970:CDS |
| TTTGCATGGGAATTCCCAAA+AGG | 0.511782 | 2_1:+4209687 | None:intergenic |
| GGAGTTTGATGTGGTTGAAA+AGG | 0.511822 | 2_1:+4210122 | None:intergenic |
| CCAGGCAGAGTTGTGATTCG+TGG | 0.513994 | 2_1:-4204931 | Msa0188970:three_prime_UTR |
| TCAAAGCGTGTTCGAAGTTG+TGG | 0.514973 | 2_1:+4209921 | None:intergenic |
| GATGGAAGAGAAGAAGCTGT+TGG | 0.515294 | 2_1:+4209792 | None:intergenic |
| TTCCGTCTGTATCGAAGGGT+TGG | 0.515452 | 2_1:+4209963 | None:intergenic |
| TGAAAGAAGACTTGGAATCC+AGG | 0.517407 | 2_1:-4204949 | Msa0188970:three_prime_UTR |
| TAATTATCAGCCAACCCTCT+TGG | 0.517519 | 2_1:+4204803 | None:intergenic |
| ATTATGGTGCAAATAAGGTT+CGG | 0.528988 | 2_1:-4209403 | Msa0188970:CDS |
| TAGATGCAGATCAGATTGTC+CGG | 0.529809 | 2_1:-4206550 | Msa0188970:CDS |
| CATTGAAATTGAAGCTGTTG+AGG | 0.531529 | 2_1:+4210012 | None:intergenic |
| GGAAGCTAGGAATTGTGTTA+GGG | 0.534932 | 2_1:+4209826 | None:intergenic |
| TACCAAAATTCTTAAAGAGA+AGG | 0.535576 | 2_1:+4204737 | None:intergenic |
| GAAGATCATGAAAGAAGACT+TGG | 0.535690 | 2_1:-4204957 | Msa0188970:three_prime_UTR |
| GTCATAGAGTTCTCCCATGT+CGG | 0.536223 | 2_1:+4206526 | None:intergenic |
| CACCAAGTTTAATTGCCAAA+GGG | 0.536544 | 2_1:-4209580 | Msa0188970:CDS |
| GTTTGTGGCTTATGGTTATG+GGG | 0.537226 | 2_1:-4209616 | Msa0188970:CDS |
| TATCTCCAGCAGCAGTCTCT+CGG | 0.539773 | 2_1:+4206125 | None:intergenic |
| TGTGATCAGCTGAATGAAGA+TGG | 0.541577 | 2_1:+4209774 | None:intergenic |
| TCTTCATTCAGCTGATCACA+TGG | 0.543097 | 2_1:-4209771 | Msa0188970:CDS |
| AAATTTCTTACCAAGAGGGT+TGG | 0.545104 | 2_1:-4204813 | Msa0188970:three_prime_UTR |
| AAGTTGTGGAGATGATATGA+GGG | 0.547077 | 2_1:+4209935 | None:intergenic |
| ATCTAAATTTCTTACCAAGA+GGG | 0.548155 | 2_1:-4204817 | Msa0188970:three_prime_UTR |
| ACTATTTGGATCCTTGCTAA+GGG | 0.551374 | 2_1:+4206081 | None:intergenic |
| ACATGATTAGGTAAAGTTCA+AGG | 0.554269 | 2_1:+4210038 | None:intergenic |
| GATTATGGAGGACGCGGCGT+AGG | 0.554655 | 2_1:+4209880 | None:intergenic |
| ATTTCTCACCTGATCCAAGT+TGG | 0.558565 | 2_1:+4206054 | None:intergenic |
| TTTCTATGAAACCCTTAGCA+AGG | 0.565485 | 2_1:-4206092 | Msa0188970:CDS |
| ACTATACTTTGGAAGCGTGT+AGG | 0.565542 | 2_1:+4204645 | None:intergenic |
| TTGCATGGGAATTCCCAAAA+GGG | 0.566598 | 2_1:+4209688 | None:intergenic |
| TTGTGATAATAATAGGGAGA+TGG | 0.568217 | 2_1:-4206466 | Msa0188970:CDS |
| ACACCAAGTTTAATTGCCAA+AGG | 0.571150 | 2_1:-4209581 | Msa0188970:CDS |
| GATAATAATAGGGAGATGGA+TGG | 0.578982 | 2_1:-4206462 | Msa0188970:CDS |
| CAGATTGTCCGGACCGACAT+GGG | 0.579595 | 2_1:-4206539 | Msa0188970:CDS |
| GTCAATGATTATGGAGGACG+CGG | 0.579735 | 2_1:+4209874 | None:intergenic |
| AGGTTCGGTATTTCTCGTTG+GGG | 0.581131 | 2_1:-4209388 | Msa0188970:CDS |
| ATTGTTCCGTCTGTATCGAA+GGG | 0.588747 | 2_1:+4209959 | None:intergenic |
| TCAATCCCCTGACCAATCAA+AGG | 0.589209 | 2_1:-4205017 | Msa0188970:CDS |
| TAAGGGTTTCATAGAAAACT+CGG | 0.591129 | 2_1:+4206098 | None:intergenic |
| CTGTATCGAAGGGTTGGTGT+CGG | 0.591425 | 2_1:+4209969 | None:intergenic |
| GAACCATGTTGGTGAAATGT+AGG | 0.593760 | 2_1:+4210081 | None:intergenic |
| CATGGGAGAACTCTATGACA+TGG | 0.596370 | 2_1:-4206522 | Msa0188970:CDS |
| TGAAAAGTTAAGTGATGATG+TGG | 0.600534 | 2_1:-4209339 | Msa0188970:CDS |
| ATTCCTACATTTCACCAACA+TGG | 0.602217 | 2_1:-4210084 | Msa0188970:CDS |
| CGAATCCTTTGATTGGTCAG+GGG | 0.604706 | 2_1:+4205012 | None:intergenic |
| GCTGATCACATGGGACCAGA+AGG | 0.605989 | 2_1:-4209761 | Msa0188970:CDS |
| TCAGATTGTCCGGACCGACA+TGG | 0.607365 | 2_1:-4206540 | Msa0188970:CDS |
| TCTGTGATATTTGATGCAGT+TGG | 0.623123 | 2_1:-4204860 | Msa0188970:three_prime_UTR |
| TATCTAAATTTCTTACCAAG+AGG | 0.624445 | 2_1:-4204818 | Msa0188970:three_prime_UTR |
| TTGGCAAACGTATAGCATCA+TGG | 0.626082 | 2_1:-4204841 | Msa0188970:three_prime_UTR |
| TCGTGGACACAATTGAGACA+AGG | 0.633637 | 2_1:-4204914 | Msa0188970:three_prime_UTR |
| CACCAACCCTTCGATACAGA+CGG | 0.637019 | 2_1:-4209965 | Msa0188970:CDS |
| TTTGATGTTGAGAACCATGT+TGG | 0.643972 | 2_1:+4210070 | None:intergenic |
| CGTGGACACAATTGAGACAA+GGG | 0.645450 | 2_1:-4204913 | Msa0188970:three_prime_UTR |
| AGTATTAAGAAAGCAAAACC+AGG | 0.657206 | 2_1:+4210157 | None:intergenic |
| CTTCATTCAGCTGATCACAT+GGG | 0.667757 | 2_1:-4209770 | Msa0188970:CDS |
| GGCGTAGGCGAAGAAAGCCA+TGG | 0.671834 | 2_1:+4209895 | None:intergenic |
| AGTTGTGGAGATGATATGAG+GGG | 0.675396 | 2_1:+4209936 | None:intergenic |
| ACAAAATGGAGTGTATGCAG+AGG | 0.685780 | 2_1:+4206485 | None:intergenic |
| CTAGACGAATTGTAGCTGAG+TGG | 0.738770 | 2_1:-4205105 | Msa0188970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAACTTTTTTTTTTTGA+AGG | - | chr2_1:4205746-4205765 | Msa0188970:intron | 10.0% |
| !!! | TCTTTTATTAACTTATTATT+TGG | - | chr2_1:4205771-4205790 | Msa0188970:intron | 10.0% |
| !! | ATTAAAAAATTGATATGTAA+TGG | + | chr2_1:4206268-4206287 | None:intergenic | 10.0% |
| !!! | NNNNNNNNNTGACTTTTAAT+TGG | + | chr2_1:4206915-4206934 | None:intergenic | 10.0% |
| !!! | AATTTCTTCTTTTTTTATAT+TGG | - | chr2_1:4207739-4207758 | Msa0188970:intron | 10.0% |
| !!! | ACTTAAATTTTATAATAGAA+AGG | - | chr2_1:4209073-4209092 | Msa0188970:intron | 10.0% |
| !!! | CTTAAATTTTATAATAGAAA+GGG | - | chr2_1:4209074-4209093 | Msa0188970:intron | 10.0% |
| !!! | AATATAATTTTATGAAACTT+TGG | + | chr2_1:4209124-4209143 | None:intergenic | 10.0% |
| !!! | TCTTTAAGTATATTTTTTCA+AGG | - | chr2_1:4205057-4205076 | Msa0188970:CDS | 15.0% |
| !!! | TTGTTAATATTTTGTTTAGT+TGG | - | chr2_1:4205214-4205233 | Msa0188970:intron | 15.0% |
| !!! | TTAATTTGTGATTACTTATT+TGG | - | chr2_1:4205557-4205576 | Msa0188970:intron | 15.0% |
| !! | CACATTATTAAATATATACA+TGG | + | chr2_1:4205627-4205646 | None:intergenic | 15.0% |
| !!! | AATTTGCCAATTATTTTATA+TGG | - | chr2_1:4205802-4205821 | Msa0188970:intron | 15.0% |
| !! | TCAAATCCATATAAAATAAT+TGG | + | chr2_1:4205811-4205830 | None:intergenic | 15.0% |
| !!! | TTTTAGTATATATCAACAAT+AGG | + | chr2_1:4205855-4205874 | None:intergenic | 15.0% |
| !!! | TTTTTAATATTAAAAAGGTG+TGG | - | chr2_1:4206280-4206299 | Msa0188970:intron | 15.0% |
| !!! | TTTTAATATTAAAAAGGTGT+GGG | - | chr2_1:4206281-4206300 | Msa0188970:intron | 15.0% |
| !!! | TTTTAAACACAATTTTACAT+AGG | + | chr2_1:4208096-4208115 | None:intergenic | 15.0% |
| !! | TATTAATTTATATTCAACAG+TGG | + | chr2_1:4208285-4208304 | None:intergenic | 15.0% |
| !!! | TTTTATAAAACAAATAGAGA+AGG | + | chr2_1:4208982-4209001 | None:intergenic | 15.0% |
| !! | GTTTCATAAAATTATATTTG+TGG | - | chr2_1:4209126-4209145 | Msa0188970:intron | 15.0% |
| !!! | AGGAATTTGGATTTTTAATA+TGG | + | chr2_1:4204597-4204616 | None:intergenic | 20.0% |
| !!! | TTCAATTTTGTCAATGATTA+TGG | + | chr2_1:4204833-4204852 | None:intergenic | 20.0% |
| !!! | TAATATTTTGTTTAGTTGGT+TGG | - | chr2_1:4205218-4205237 | Msa0188970:intron | 20.0% |
| !!! | ATGTATTTTACTAGATTAGT+GGG | - | chr2_1:4205599-4205618 | Msa0188970:intron | 20.0% |
| !!! | TAAGTATTGTTAGAAAAGTT+AGG | - | chr2_1:4206434-4206453 | Msa0188970:intron | 20.0% |
| !! | CATTCTTATATAGAATGTTA+GGG | - | chr2_1:4206745-4206764 | Msa0188970:intron | 20.0% |
| !! | TAAATCAATAGCAATGAATA+AGG | - | chr2_1:4206871-4206890 | Msa0188970:intron | 20.0% |
| !! | AAATCAATAGCAATGAATAA+GGG | - | chr2_1:4206872-4206891 | Msa0188970:intron | 20.0% |
| !!! | GATAGTTATAATTTTAGTTC+TGG | - | chr2_1:4207084-4207103 | Msa0188970:intron | 20.0% |
| !! | AATGAAAAACCATTGTTATA+TGG | - | chr2_1:4207107-4207126 | Msa0188970:intron | 20.0% |
| !!! | GTATTTTGATAATACATGAT+TGG | + | chr2_1:4207151-4207170 | None:intergenic | 20.0% |
| !! | TTGAAATTGAAAGCAAATAT+AGG | + | chr2_1:4207424-4207443 | None:intergenic | 20.0% |
| !! | ATCAATATCTAAAAAGATTC+TGG | + | chr2_1:4207515-4207534 | None:intergenic | 20.0% |
| !!! | ATGTGTGTTTTTTAATTGTT+CGG | - | chr2_1:4207546-4207565 | Msa0188970:intron | 20.0% |
| !!! | GAAGAAATTTTAACCTTAAA+AGG | + | chr2_1:4207728-4207747 | None:intergenic | 20.0% |
| !!! | TCCATTTTGTGATAATAATA+GGG | - | chr2_1:4208223-4208242 | Msa0188970:intron | 20.0% |
| !! | AAATAGTTACTAACCTAATA+TGG | + | chr2_1:4208448-4208467 | None:intergenic | 20.0% |
| !!! | TATGATTAAGATATAGGTTT+TGG | - | chr2_1:4209171-4209190 | Msa0188970:intron | 20.0% |
| !! | ATCCATCATACTAAAATAAT+GGG | + | chr2_1:4209200-4209219 | None:intergenic | 20.0% |
| !!! | AAATTTTCACTCAAAATTTC+AGG | - | chr2_1:4209289-4209308 | Msa0188970:intron | 20.0% |
| !! | AATAAAGTTACACTATACTT+TGG | + | chr2_1:4210064-4210083 | None:intergenic | 20.0% |
| !! | ATACTAATTCATTGAGATTA+AGG | - | chr2_1:4210115-4210134 | Msa0188970:CDS | 20.0% |
| !! | TACTAATTCATTGAGATTAA+GGG | - | chr2_1:4210116-4210135 | Msa0188970:CDS | 20.0% |
| ! | CTTTCTTAATACTAGGATTA+TGG | - | chr2_1:4204548-4204567 | Msa0188970:three_prime_UTR | 25.0% |
| !! | TTTTAATATGGAGTTTGATG+TGG | + | chr2_1:4204585-4204604 | None:intergenic | 25.0% |
| !! | ATTTCAATGGAACTTTTCAT+CGG | - | chr2_1:4204697-4204716 | Msa0188970:three_prime_UTR | 25.0% |
| !! | AATTTTGTCAATGATTATGG+AGG | + | chr2_1:4204830-4204849 | None:intergenic | 25.0% |
| !!! | GTATATTTTTTCAAGGTTTG+TGG | - | chr2_1:4205064-4205083 | Msa0188970:CDS | 25.0% |
| !!! | TGTTTTATGAATTCTGAAGA+AGG | - | chr2_1:4205138-4205157 | Msa0188970:intron | 25.0% |
| ! | ATACAAAGAAACACCAAAAA+CGG | + | chr2_1:4205256-4205275 | None:intergenic | 25.0% |
| !!! | TTTTGGTGTTTCTTTGTATT+TGG | - | chr2_1:4205257-4205276 | Msa0188970:intron | 25.0% |
| !!! | TTGGTTTTGACCAAATATTA+TGG | - | chr2_1:4205276-4205295 | Msa0188970:intron | 25.0% |
| ! | CTTATTTGCACCATAATATT+TGG | + | chr2_1:4205289-4205308 | None:intergenic | 25.0% |
| ! | CAAATATTATGGTGCAAATA+AGG | - | chr2_1:4205287-4205306 | Msa0188970:intron | 25.0% |
| !! | CCAATATGTATAAAGCTTTT+GGG | + | chr2_1:4205411-4205430 | None:intergenic | 25.0% |
| !! | CCAAAAGCTTTATACATATT+GGG | - | chr2_1:4205409-4205428 | Msa0188970:intron | 25.0% |
| !! | TCACAAATTAAGAAAGTATG+TGG | - | chr2_1:4205477-4205496 | Msa0188970:intron | 25.0% |
| !! | AAGTATGTGGAATTTTACTT+AGG | - | chr2_1:4205490-4205509 | Msa0188970:intron | 25.0% |
| !! | AGTATGTGGAATTTTACTTA+GGG | - | chr2_1:4205491-4205510 | Msa0188970:intron | 25.0% |
| ! | TTGTGATTACTTATTTGGTT+AGG | - | chr2_1:4205562-4205581 | Msa0188970:intron | 25.0% |
| !! | CATGTATTTTACTAGATTAG+TGG | - | chr2_1:4205598-4205617 | Msa0188970:intron | 25.0% |
| !! | TGTATTTTACTAGATTAGTG+GGG | - | chr2_1:4205600-4205619 | Msa0188970:intron | 25.0% |
| ! | TAATAATGTGTCAACAAGAA+TGG | - | chr2_1:4205637-4205656 | Msa0188970:intron | 25.0% |
| !!! | TTAAGGAAACTTTAGTTTTG+AGG | - | chr2_1:4205665-4205684 | Msa0188970:intron | 25.0% |
| ! | AAATCACTTGATCGAAAATA+CGG | + | chr2_1:4205943-4205962 | None:intergenic | 25.0% |
| ! | AAATAATCCGAAGTTACAAT+TGG | - | chr2_1:4206011-4206030 | Msa0188970:intron | 25.0% |
| !!! | GTTATTGATAGTTGATTTGT+GGG | + | chr2_1:4206239-4206258 | None:intergenic | 25.0% |
| !!! | AGTTATTGATAGTTGATTTG+TGG | + | chr2_1:4206240-4206259 | None:intergenic | 25.0% |
| ! | AATCTTTACTTTCTTCTGTT+TGG | + | chr2_1:4206471-4206490 | None:intergenic | 25.0% |
| ! | CAGAAGAAAGTAAAGATTAT+AGG | - | chr2_1:4206473-4206492 | Msa0188970:CDS | 25.0% |
| ! | AAAGAATGGCTAACAATAAT+AGG | - | chr2_1:4206689-4206708 | Msa0188970:intron | 25.0% |
| ! | ATTCTATATAAGAATGGTTG+TGG | + | chr2_1:4206741-4206760 | None:intergenic | 25.0% |
| ! | CCTAACATTCTATATAAGAA+TGG | + | chr2_1:4206747-4206766 | None:intergenic | 25.0% |
| ! | CCATTCTTATATAGAATGTT+AGG | - | chr2_1:4206744-4206763 | Msa0188970:intron | 25.0% |
| !! | TTTGATAATACATGATTGGT+CGG | + | chr2_1:4207147-4207166 | None:intergenic | 25.0% |
| ! | ATTCTCCTATTGTGAAAAAT+AGG | + | chr2_1:4207269-4207288 | None:intergenic | 25.0% |
| !! | AATATCTTTTCAATTGCTTC+TGG | - | chr2_1:4207319-4207338 | Msa0188970:intron | 25.0% |
| !! | TTGTATTTTGCTGGAAATTA+TGG | - | chr2_1:4207377-4207396 | Msa0188970:intron | 25.0% |
| ! | TTAATGAACCAGAATTTAAC+AGG | + | chr2_1:4207689-4207708 | None:intergenic | 25.0% |
| !!! | GAAATTTTAACCTTAAAAGG+AGG | + | chr2_1:4207725-4207744 | None:intergenic | 25.0% |
| ! | TTGACATAATTGAACTACTT+TGG | - | chr2_1:4207791-4207810 | Msa0188970:intron | 25.0% |
| !! | GGCATATAAAATTTTATTCC+TGG | - | chr2_1:4207941-4207960 | Msa0188970:intron | 25.0% |
| !! | CTCCATTTTGTGATAATAAT+AGG | - | chr2_1:4208222-4208241 | Msa0188970:intron | 25.0% |
| ! | TCCCTATTATTATCACAAAA+TGG | + | chr2_1:4208227-4208246 | None:intergenic | 25.0% |
| !!! | TTTGCCTTGTTATTTTGTTA+GGG | - | chr2_1:4208389-4208408 | Msa0188970:intron | 25.0% |
| !! | AGATGACATTTACATACTTT+TGG | + | chr2_1:4208485-4208504 | None:intergenic | 25.0% |
| ! | AAAAAGGATAAGATTACTGA+AGG | - | chr2_1:4208873-4208892 | Msa0188970:intron | 25.0% |
| !!! | TGGAATTATCACTTTTTACT+AGG | - | chr2_1:4208945-4208964 | Msa0188970:intron | 25.0% |
| !!! | ATTATCACTTTTTACTAGGT+TGG | - | chr2_1:4208949-4208968 | Msa0188970:intron | 25.0% |
| ! | GTTCATAAAATCACTTTAGA+AGG | - | chr2_1:4209044-4209063 | Msa0188970:intron | 25.0% |
| !!! | TACCCATTATTTTAGTATGA+TGG | - | chr2_1:4209195-4209214 | Msa0188970:intron | 25.0% |
| ! | GATCCATCATACTAAAATAA+TGG | + | chr2_1:4209201-4209220 | None:intergenic | 25.0% |
| !!! | TTGAGTGAAAATTTTAGCTA+AGG | + | chr2_1:4209283-4209302 | None:intergenic | 25.0% |
| ! | CTTGATTAATATTTCCACTT+TGG | - | chr2_1:4209557-4209576 | Msa0188970:CDS | 25.0% |
| ! | TATCTAAATTTCTTACCAAG+AGG | - | chr2_1:4209877-4209896 | Msa0188970:CDS | 25.0% |
| ! | ATCTAAATTTCTTACCAAGA+GGG | - | chr2_1:4209878-4209897 | Msa0188970:CDS | 25.0% |
| ! | TACCAAAATTCTTAAAGAGA+AGG | + | chr2_1:4209961-4209980 | None:intergenic | 25.0% |
| ! | TACATTACTTCTCTCTTTAA+TGG | - | chr2_1:4210085-4210104 | Msa0188970:CDS | 25.0% |
| AGTATTAAGAAAGCAAAACC+AGG | + | chr2_1:4204541-4204560 | None:intergenic | 30.0% | |
| ! | GGTTTTGCTTTCTTAATACT+AGG | - | chr2_1:4204541-4204560 | Msa0188970:three_prime_UTR | 30.0% |
| ACATGATTAGGTAAAGTTCA+AGG | + | chr2_1:4204660-4204679 | None:intergenic | 30.0% | |
| AGAATTCATAAAACACCCTT+TGG | + | chr2_1:4205133-4205152 | None:intergenic | 30.0% | |
| ATTATGGTGCAAATAAGGTT+CGG | - | chr2_1:4205292-4205311 | Msa0188970:intron | 30.0% | |
| ! | TGAAAAGTTAAGTGATGATG+TGG | - | chr2_1:4205356-4205375 | Msa0188970:intron | 30.0% |
| ! | CCCAAAAGCTTTATACATAT+TGG | - | chr2_1:4205408-4205427 | Msa0188970:intron | 30.0% |
| ! | CCCAATATGTATAAAGCTTT+TGG | + | chr2_1:4205412-4205431 | None:intergenic | 30.0% |
| ! | GTATGTGGAATTTTACTTAG+GGG | - | chr2_1:4205492-4205511 | Msa0188970:intron | 30.0% |
| ! | TATGTGGAATTTTACTTAGG+GGG | - | chr2_1:4205493-4205512 | Msa0188970:intron | 30.0% |
| !!! | GAAACTTTAGTTTTGAGGAT+GGG | - | chr2_1:4205670-4205689 | Msa0188970:intron | 30.0% |
| TTTAATGTGTTGCATGCATA+TGG | - | chr2_1:4205960-4205979 | Msa0188970:intron | 30.0% | |
| ! | GGATTATTTCTCATCATCTT+TGG | + | chr2_1:4206000-4206019 | None:intergenic | 30.0% |
| ATTTAAGTACCCAAAAATGG+AGG | + | chr2_1:4206111-4206130 | None:intergenic | 30.0% | |
| !!! | TCCATTTTTGGGTACTTAAA+TGG | - | chr2_1:4206110-4206129 | Msa0188970:CDS | 30.0% |
| !!! | CCATTTTTGGGTACTTAAAT+GGG | - | chr2_1:4206111-4206130 | Msa0188970:CDS | 30.0% |
| AATAAGTGATGTGTACATGT+GGG | + | chr2_1:4206138-4206157 | None:intergenic | 30.0% | |
| AAATAAGTGATGTGTACATG+TGG | + | chr2_1:4206139-4206158 | None:intergenic | 30.0% | |
| !! | ATTGTGGAGAAATTTTTGAG+GGG | + | chr2_1:4206355-4206374 | None:intergenic | 30.0% |
| ! | CATTGTGGAGAAATTTTTGA+GGG | + | chr2_1:4206356-4206375 | None:intergenic | 30.0% |
| CTCAAAAATTTCTCCACAAT+GGG | - | chr2_1:4206355-4206374 | Msa0188970:intron | 30.0% | |
| TCAAAAATTTCTCCACAATG+GGG | - | chr2_1:4206356-4206375 | Msa0188970:intron | 30.0% | |
| !! | TACTCCTCAAAAAAGTATCT+GGG | + | chr2_1:4206655-4206674 | None:intergenic | 30.0% |
| GAGAAAGAAGGATAAAAGAA+TGG | - | chr2_1:4206675-4206694 | Msa0188970:intron | 30.0% | |
| !! | CAACGGATATTTTTGATTGT+GGG | + | chr2_1:4206801-4206820 | None:intergenic | 30.0% |
| CAAAAATATCCGTTGGAATT+TGG | - | chr2_1:4206806-4206825 | Msa0188970:intron | 30.0% | |
| CATTATTAGCCAAATTCCAA+CGG | + | chr2_1:4206818-4206837 | None:intergenic | 30.0% | |
| TTGGAATTTGGCTAATAATG+TGG | - | chr2_1:4206818-4206837 | Msa0188970:intron | 30.0% | |
| TGGAATTTGGCTAATAATGT+GGG | - | chr2_1:4206819-4206838 | Msa0188970:intron | 30.0% | |
| GATACGATGAAAGAGAAAAA+GGG | + | chr2_1:4207207-4207226 | None:intergenic | 30.0% | |
| TGATACGATGAAAGAGAAAA+AGG | + | chr2_1:4207208-4207227 | None:intergenic | 30.0% | |
| ! | GTTACAACTCTAGGAAATTA+TGG | + | chr2_1:4207238-4207257 | None:intergenic | 30.0% |
| TTGTGAAAAATAGGTTCACT+CGG | + | chr2_1:4207260-4207279 | None:intergenic | 30.0% | |
| !! | GTGAACCTATTTTTCACAAT+AGG | - | chr2_1:4207261-4207280 | Msa0188970:intron | 30.0% |
| AAAACAAGAGAACAACTTAC+AGG | + | chr2_1:4207348-4207367 | None:intergenic | 30.0% | |
| GAGATTCAAAAGACTGAAAA+GGG | + | chr2_1:4207466-4207485 | None:intergenic | 30.0% | |
| TGAGATTCAAAAGACTGAAA+AGG | + | chr2_1:4207467-4207486 | None:intergenic | 30.0% | |
| ATTCAAAGCAGAATTTGACA+AGG | - | chr2_1:4207764-4207783 | Msa0188970:intron | 30.0% | |
| ATATTCGAAACCATACTCTT+GGG | + | chr2_1:4207855-4207874 | None:intergenic | 30.0% | |
| AGAAAAAGCAGCGAATAATT+TGG | - | chr2_1:4207919-4207938 | Msa0188970:intron | 30.0% | |
| GAAAAAGCAGCGAATAATTT+GGG | - | chr2_1:4207920-4207939 | Msa0188970:intron | 30.0% | |
| AAAAGTCTTCCAATATTTGC+AGG | - | chr2_1:4208113-4208132 | Msa0188970:intron | 30.0% | |
| CAAAAATGACCTGCAAATAT+TGG | + | chr2_1:4208125-4208144 | None:intergenic | 30.0% | |
| CTCTATGACATGGATTTAAA+AGG | - | chr2_1:4208183-4208202 | Msa0188970:intron | 30.0% | |
| TTGTGATAATAATAGGGAGA+TGG | - | chr2_1:4208229-4208248 | Msa0188970:intron | 30.0% | |
| ACACCCATACAATTAAATGT+AGG | - | chr2_1:4208342-4208361 | Msa0188970:intron | 30.0% | |
| GCACCTACATTTAATTGTAT+GGG | + | chr2_1:4208348-4208367 | None:intergenic | 30.0% | |
| TGCACCTACATTTAATTGTA+TGG | + | chr2_1:4208349-4208368 | None:intergenic | 30.0% | |
| !!! | CTTTGCCTTGTTATTTTGTT+AGG | - | chr2_1:4208388-4208407 | Msa0188970:intron | 30.0% |
| GAAACCCTAACAAAATAACA+AGG | + | chr2_1:4208396-4208415 | None:intergenic | 30.0% | |
| !!! | TGTTATTTTGTTAGGGTTTC+TGG | - | chr2_1:4208396-4208415 | Msa0188970:intron | 30.0% |
| GTTACTAACCTAATATGGTA+CGG | + | chr2_1:4208443-4208462 | None:intergenic | 30.0% | |
| TAAGGGTTTCATAGAAAACT+CGG | + | chr2_1:4208600-4208619 | None:intergenic | 30.0% | |
| TTATGACACAACATTGCATA+TGG | + | chr2_1:4208843-4208862 | None:intergenic | 30.0% | |
| AGTTGAAGAAATTGATCTGT+TGG | - | chr2_1:4208925-4208944 | Msa0188970:intron | 30.0% | |
| CGGACATATGATTAAGATAT+AGG | - | chr2_1:4209165-4209184 | Msa0188970:intron | 30.0% | |
| TAGAATGGAAGTAAACGAAA+AGG | + | chr2_1:4209223-4209242 | None:intergenic | 30.0% | |
| TCTTGCGGTAAAGAAAAAAT+GGG | + | chr2_1:4209344-4209363 | None:intergenic | 30.0% | |
| TTCTTGCGGTAAAGAAAAAA+TGG | + | chr2_1:4209345-4209364 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTTTACCGCAAGAA+TGG | - | chr2_1:4209345-4209364 | Msa0188970:CDS | 30.0% |
| !!! | ACAGATCAATTGTTTTTGCT+TGG | + | chr2_1:4209408-4209427 | None:intergenic | 30.0% |
| GAAATATTCACCTGAAGTTT+GGG | + | chr2_1:4209454-4209473 | None:intergenic | 30.0% | |
| AGAAATATTCACCTGAAGTT+TGG | + | chr2_1:4209455-4209474 | None:intergenic | 30.0% | |
| TTGAAGTTTCTTTCTGTACT+TGG | - | chr2_1:4209477-4209496 | Msa0188970:CDS | 30.0% | |
| AGCATATGCAGAAAATAAGT+CGG | + | chr2_1:4209539-4209558 | None:intergenic | 30.0% | |
| AATATTTCCACTTTGGTTAC+AGG | - | chr2_1:4209564-4209583 | Msa0188970:CDS | 30.0% | |
| ATATTTCCACTTTGGTTACA+GGG | - | chr2_1:4209565-4209584 | Msa0188970:CDS | 30.0% | |
| AAATTCACTGCACGAATATT+AGG | - | chr2_1:4209637-4209656 | Msa0188970:CDS | 30.0% | |
| !! | TGCCTTCTCTTTAAGAATTT+TGG | - | chr2_1:4209956-4209975 | Msa0188970:CDS | 30.0% |
| TAGGATTGTTCATGAGATTA+TGG | + | chr2_1:4210034-4210053 | None:intergenic | 30.0% | |
| TCAATGATTCGACCATTAAA+TGG | - | chr2_1:4210165-4210184 | Msa0188970:CDS | 30.0% | |
| GTATCATGCAAACCATTTAA+TGG | + | chr2_1:4210180-4210199 | None:intergenic | 30.0% | |
| ! | GTTGGTGAAATGTAGGAATT+TGG | + | chr2_1:4204610-4204629 | None:intergenic | 35.0% |
| ATTCCTACATTTCACCAACA+TGG | - | chr2_1:4204611-4204630 | Msa0188970:three_prime_UTR | 35.0% | |
| TTTGATGTTGAGAACCATGT+TGG | + | chr2_1:4204628-4204647 | None:intergenic | 35.0% | |
| CATTGAAATTGAAGCTGTTG+AGG | + | chr2_1:4204686-4204705 | None:intergenic | 35.0% | |
| CTCAACAGCTTCAATTTCAA+TGG | - | chr2_1:4204684-4204703 | Msa0188970:three_prime_UTR | 35.0% | |
| AAGTTGTGGAGATGATATGA+GGG | + | chr2_1:4204763-4204782 | None:intergenic | 35.0% | |
| AAGCTGTTGGAAAAAAGCTA+TGG | + | chr2_1:4204893-4204912 | None:intergenic | 35.0% | |
| ! | TCTCTTTCAACTACCCTTTT+GGG | - | chr2_1:4204994-4205013 | Msa0188970:CDS | 35.0% |
| !!! | ACCAAGAAGCTTTTTTGCAT+GGG | + | chr2_1:4205024-4205043 | None:intergenic | 35.0% |
| !!! | AACCAAGAAGCTTTTTTGCA+TGG | + | chr2_1:4205025-4205044 | None:intergenic | 35.0% |
| !! | TTTTCAAGGTTTGTGGCTTA+TGG | - | chr2_1:4205071-4205090 | Msa0188970:CDS | 35.0% |
| ACACCAAGTTTAATTGCCAA+AGG | - | chr2_1:4205114-4205133 | Msa0188970:intron | 35.0% | |
| CACCAAGTTTAATTGCCAAA+GGG | - | chr2_1:4205115-4205134 | Msa0188970:intron | 35.0% | |
| !!! | GTTATTGTTGTTGCCGTTTT+TGG | - | chr2_1:4205240-4205259 | Msa0188970:intron | 35.0% |
| TCTCAAAAGGTAAGCTTAGT+TGG | - | chr2_1:4205381-4205400 | Msa0188970:intron | 35.0% | |
| AATGTGTCAACAAGAATGGT+TGG | - | chr2_1:4205641-4205660 | Msa0188970:intron | 35.0% | |
| !!! | GGAAACTTTAGTTTTGAGGA+TGG | - | chr2_1:4205669-4205688 | Msa0188970:intron | 35.0% |
| ATCCACTCCAATTGTAACTT+CGG | + | chr2_1:4206021-4206040 | None:intergenic | 35.0% | |
| CCCATTTAAGTACCCAAAAA+TGG | + | chr2_1:4206114-4206133 | None:intergenic | 35.0% | |
| GGAGAGATTGAGTACTTATT+AGG | + | chr2_1:4206182-4206201 | None:intergenic | 35.0% | |
| TCTCACACAAAGTTCTTGAA+TGG | - | chr2_1:4206211-4206230 | Msa0188970:intron | 35.0% | |
| CTCACACAAAGTTCTTGAAT+GGG | - | chr2_1:4206212-4206231 | Msa0188970:intron | 35.0% | |
| ! | CCATTGTGGAGAAATTTTTG+AGG | + | chr2_1:4206357-4206376 | None:intergenic | 35.0% |
| CCTCAAAAATTTCTCCACAA+TGG | - | chr2_1:4206354-4206373 | Msa0188970:intron | 35.0% | |
| CAAAAATTTCTCCACAATGG+GGG | - | chr2_1:4206357-4206376 | Msa0188970:intron | 35.0% | |
| ! | GGTCTTAACTATTTAAGACC+CGG | + | chr2_1:4206396-4206415 | None:intergenic | 35.0% |
| AATACTTAGACCATCCACAA+TGG | + | chr2_1:4206422-4206441 | None:intergenic | 35.0% | |
| !!! | ATTGCCCAGATACTTTTTTG+AGG | - | chr2_1:4206648-4206667 | Msa0188970:intron | 35.0% |
| !! | CTACTCCTCAAAAAAGTATC+TGG | + | chr2_1:4206656-4206675 | None:intergenic | 35.0% |
| !! | TTTTGAGGAGTAGAGAAAGA+AGG | - | chr2_1:4206663-4206682 | Msa0188970:intron | 35.0% |
| TATAGAATGTTAGGGTAGAG+AGG | - | chr2_1:4206753-4206772 | Msa0188970:intron | 35.0% | |
| !! | CCAACGGATATTTTTGATTG+TGG | + | chr2_1:4206802-4206821 | None:intergenic | 35.0% |
| CCACAATCAAAAATATCCGT+TGG | - | chr2_1:4206799-4206818 | Msa0188970:intron | 35.0% | |
| GGAATTTGGCTAATAATGTG+GGG | - | chr2_1:4206820-4206839 | Msa0188970:intron | 35.0% | |
| ACACAAAGGCCATATAACAA+TGG | + | chr2_1:4207119-4207138 | None:intergenic | 35.0% | |
| ! | ACTCTAGGAAATTATGGAGT+AGG | + | chr2_1:4207232-4207251 | None:intergenic | 35.0% |
| !!! | GTTGTTCTCTTGTTTTGACA+TGG | - | chr2_1:4207352-4207371 | Msa0188970:intron | 35.0% |
| ! | GACATGGTATTGTATTTTGC+TGG | - | chr2_1:4207368-4207387 | Msa0188970:intron | 35.0% |
| !! | CTTCAAAAAGCGTTCATATC+TGG | + | chr2_1:4207629-4207648 | None:intergenic | 35.0% |
| CATATTCGAAACCATACTCT+TGG | + | chr2_1:4207856-4207875 | None:intergenic | 35.0% | |
| AAACCATGATACCTTCTCTA+AGG | + | chr2_1:4207985-4208004 | None:intergenic | 35.0% | |
| TGTCACACATGATATTGGAA+TGG | + | chr2_1:4208050-4208069 | None:intergenic | 35.0% | |
| GTCAATGTCACACATGATAT+TGG | + | chr2_1:4208055-4208074 | None:intergenic | 35.0% | |
| GATAATAATAGGGAGATGGA+TGG | - | chr2_1:4208233-4208252 | Msa0188970:intron | 35.0% | |
| TGTTGTTGTAAATGAGCTCT+TGG | - | chr2_1:4208307-4208326 | Msa0188970:intron | 35.0% | |
| !! | ATTTTGTTAGGGTTTCTGGA+AGG | - | chr2_1:4208400-4208419 | Msa0188970:intron | 35.0% |
| !! | ATACAAAGCACTGCAAGTAA+TGG | + | chr2_1:4208530-4208549 | None:intergenic | 35.0% |
| TTTCTATGAAACCCTTAGCA+AGG | - | chr2_1:4208603-4208622 | Msa0188970:intron | 35.0% | |
| ACTATTTGGATCCTTGCTAA+GGG | + | chr2_1:4208617-4208636 | None:intergenic | 35.0% | |
| AGCTGTTAAACATGTTCGAA+TGG | - | chr2_1:4208713-4208732 | Msa0188970:intron | 35.0% | |
| TATGGAAGATACTCCAAAAG+AGG | + | chr2_1:4208742-4208761 | None:intergenic | 35.0% | |
| ! | ACGATGAAGAGTTGATCATA+TGG | + | chr2_1:4208760-4208779 | None:intergenic | 35.0% |
| ATATGATCAACTCTTCATCG+TGG | - | chr2_1:4208759-4208778 | Msa0188970:intron | 35.0% | |
| ATCATATGTCCGAAAAGACT+AGG | + | chr2_1:4209157-4209176 | None:intergenic | 35.0% | |
| ! | TTGCTGCATTCTCTTTTTGA+GGG | - | chr2_1:4209256-4209275 | Msa0188970:intron | 35.0% |
| ACAGTATGCTGAGCATAATT+AGG | + | chr2_1:4209320-4209339 | None:intergenic | 35.0% | |
| GCATATGCAGAAAATAAGTC+GGG | + | chr2_1:4209538-4209557 | None:intergenic | 35.0% | |
| CATTAGTCGAATCCTTTGAT+TGG | + | chr2_1:4209693-4209712 | None:intergenic | 35.0% | |
| GAAGATCATGAAAGAAGACT+TGG | - | chr2_1:4209738-4209757 | Msa0188970:CDS | 35.0% | |
| TCTGTGATATTTGATGCAGT+TGG | - | chr2_1:4209835-4209854 | Msa0188970:CDS | 35.0% | |
| AAATTTCTTACCAAGAGGGT+TGG | - | chr2_1:4209882-4209901 | Msa0188970:CDS | 35.0% | |
| CATTCACTGTTGTTAGTGTT+TGG | + | chr2_1:4209926-4209945 | None:intergenic | 35.0% | |
| GAGATTAAGGGCAAAATGAT+TGG | - | chr2_1:4210128-4210147 | Msa0188970:CDS | 35.0% | |
| GGAGTTTGATGTGGTTGAAA+AGG | + | chr2_1:4204576-4204595 | None:intergenic | 40.0% | |
| ! | GAACCATGTTGGTGAAATGT+AGG | + | chr2_1:4204617-4204636 | None:intergenic | 40.0% |
| CTGTTGAGGCTAACATGATT+AGG | + | chr2_1:4204672-4204691 | None:intergenic | 40.0% | |
| ATTGTTCCGTCTGTATCGAA+GGG | + | chr2_1:4204739-4204758 | None:intergenic | 40.0% | |
| AGTTGTGGAGATGATATGAG+GGG | + | chr2_1:4204762-4204781 | None:intergenic | 40.0% | |
| GAAGTTGTGGAGATGATATG+AGG | + | chr2_1:4204764-4204783 | None:intergenic | 40.0% | |
| ! | GTGTTAGGGCAAATTTTGCT+TGG | + | chr2_1:4204858-4204877 | None:intergenic | 40.0% |
| GGAAGCTAGGAATTGTGTTA+GGG | + | chr2_1:4204872-4204891 | None:intergenic | 40.0% | |
| TGGAAGCTAGGAATTGTGTT+AGG | + | chr2_1:4204873-4204892 | None:intergenic | 40.0% | |
| GGAAAAAAGCTATGGAAGCT+AGG | + | chr2_1:4204885-4204904 | None:intergenic | 40.0% | |
| TGTGATCAGCTGAATGAAGA+TGG | + | chr2_1:4204924-4204943 | None:intergenic | 40.0% | |
| TCTTCATTCAGCTGATCACA+TGG | - | chr2_1:4204924-4204943 | Msa0188970:three_prime_UTR | 40.0% | |
| CTTCATTCAGCTGATCACAT+GGG | - | chr2_1:4204925-4204944 | Msa0188970:three_prime_UTR | 40.0% | |
| AGAAGATGGTATTGTCCTTC+TGG | + | chr2_1:4204952-4204971 | None:intergenic | 40.0% | |
| CAAGAACTTGCAAGAGAAGA+TGG | + | chr2_1:4204966-4204985 | None:intergenic | 40.0% | |
| ! | CTCTCTTTCAACTACCCTTT+TGG | - | chr2_1:4204993-4205012 | Msa0188970:exon | 40.0% |
| TTGCATGGGAATTCCCAAAA+GGG | + | chr2_1:4205010-4205029 | None:intergenic | 40.0% | |
| TTTGCATGGGAATTCCCAAA+AGG | + | chr2_1:4205011-4205030 | None:intergenic | 40.0% | |
| TCCCATGCAAAAAAGCTTCT+TGG | - | chr2_1:4205020-4205039 | Msa0188970:CDS | 40.0% | |
| AGGTTTGTGGCTTATGGTTA+TGG | - | chr2_1:4205077-4205096 | Msa0188970:CDS | 40.0% | |
| GGTTTGTGGCTTATGGTTAT+GGG | - | chr2_1:4205078-4205097 | Msa0188970:CDS | 40.0% | |
| GTTTGTGGCTTATGGTTATG+GGG | - | chr2_1:4205079-4205098 | Msa0188970:CDS | 40.0% | |
| CACCCTTTGGCAATTAAACT+TGG | + | chr2_1:4205120-4205139 | None:intergenic | 40.0% | |
| ! | TAAGGTTCGGTATTTCTCGT+TGG | - | chr2_1:4205305-4205324 | Msa0188970:intron | 40.0% |
| ! | AAGGTTCGGTATTTCTCGTT+GGG | - | chr2_1:4205306-4205325 | Msa0188970:intron | 40.0% |
| ! | TGATGATGTGGAGTCTCAAA+AGG | - | chr2_1:4205368-4205387 | Msa0188970:intron | 40.0% |
| AACTCTTTCACCTGTTGACA+TGG | - | chr2_1:4205437-4205456 | Msa0188970:intron | 40.0% | |
| TTTCACCTGTTGACATGGAA+AGG | - | chr2_1:4205442-4205461 | Msa0188970:intron | 40.0% | |
| TTGACATGGAAAGGTAGGAA+GGG | - | chr2_1:4205451-4205470 | Msa0188970:intron | 40.0% | |
| CTTATTTGGTTAGGTGTGTG+AGG | - | chr2_1:4205571-4205590 | Msa0188970:intron | 40.0% | |
| !! | CAACAAGAATGGTTGGCTTA+AGG | - | chr2_1:4205648-4205667 | Msa0188970:intron | 40.0% |
| !!! | ACTTTAGTTTTGAGGATGGG+TGG | - | chr2_1:4205673-4205692 | Msa0188970:intron | 40.0% |
| ATCCGAAGTTACAATTGGAG+TGG | - | chr2_1:4206016-4206035 | Msa0188970:intron | 40.0% | |
| AAAAATGGAGGTCTCCATTG+TGG | + | chr2_1:4206099-4206118 | None:intergenic | 40.0% | |
| ! | ACAATGGAGACCTCCATTTT+TGG | - | chr2_1:4206098-4206117 | Msa0188970:CDS | 40.0% |
| !! | CAATGGAGACCTCCATTTTT+GGG | - | chr2_1:4206099-4206118 | Msa0188970:CDS | 40.0% |
| AGAACTTTGTGTGAGATGCT+GGG | + | chr2_1:4206207-4206226 | None:intergenic | 40.0% | |
| AAGAACTTTGTGTGAGATGC+TGG | + | chr2_1:4206208-4206227 | None:intergenic | 40.0% | |
| ! | TTTAAGACCCGGTACCTAAT+AGG | + | chr2_1:4206385-4206404 | None:intergenic | 40.0% |
| TAGTTAAGACCCTACCATTG+TGG | - | chr2_1:4206405-4206424 | Msa0188970:intron | 40.0% | |
| TTAGACCATCCACAATGGTA+GGG | + | chr2_1:4206417-4206436 | None:intergenic | 40.0% | |
| TCACAATAGGAGAATGCAAG+AGG | - | chr2_1:4207274-4207293 | Msa0188970:intron | 40.0% | |
| CACAATAGGAGAATGCAAGA+GGG | - | chr2_1:4207275-4207294 | Msa0188970:intron | 40.0% | |
| ACAATAGGAGAATGCAAGAG+GGG | - | chr2_1:4207276-4207295 | Msa0188970:intron | 40.0% | |
| TGCTGGAAATTATGGCTAGA+TGG | - | chr2_1:4207385-4207404 | Msa0188970:intron | 40.0% | |
| CCAGAATTTAACAGGACGAT+GGG | + | chr2_1:4207681-4207700 | None:intergenic | 40.0% | |
| ACCAGAATTTAACAGGACGA+TGG | + | chr2_1:4207682-4207701 | None:intergenic | 40.0% | |
| ! | CTATCTCTCTCCTCCTTTTA+AGG | - | chr2_1:4207712-4207731 | Msa0188970:intron | 40.0% |
| TCACATACAAATGCCCTACT+TGG | - | chr2_1:4207882-4207901 | Msa0188970:intron | 40.0% | |
| ! | TGATACCTTCTCTAAGGAGA+GGG | + | chr2_1:4207979-4207998 | None:intergenic | 40.0% |
| ! | ATGATACCTTCTCTAAGGAG+AGG | + | chr2_1:4207980-4207999 | None:intergenic | 40.0% |
| !! | TCTCCTTAGAGAAGGTATCA+TGG | - | chr2_1:4207979-4207998 | Msa0188970:intron | 40.0% |
| TAGATGCAGATCAGATTGTC+CGG | - | chr2_1:4208145-4208164 | Msa0188970:intron | 40.0% | |
| ACAAAATGGAGTGTATGCAG+AGG | + | chr2_1:4208213-4208232 | None:intergenic | 40.0% | |
| ATAGGGAGATGGATGGATAT+CGG | - | chr2_1:4208240-4208259 | Msa0188970:intron | 40.0% | |
| !!! | AGATGGATGGATATCGGTTT+TGG | - | chr2_1:4208246-4208265 | Msa0188970:intron | 40.0% |
| GTTGTAAATGAGCTCTTGGT+TGG | - | chr2_1:4208311-4208330 | Msa0188970:intron | 40.0% | |
| ! | GTTTCTGGAAGGATCATTTG+CGG | - | chr2_1:4208411-4208430 | Msa0188970:intron | 40.0% |
| ! | TTTCTGGAAGGATCATTTGC+GGG | - | chr2_1:4208412-4208431 | Msa0188970:intron | 40.0% |
| ! | GCACTGCAAGTAATGGAAAT+GGG | + | chr2_1:4208523-4208542 | None:intergenic | 40.0% |
| ! | AGCACTGCAAGTAATGGAAA+TGG | + | chr2_1:4208524-4208543 | None:intergenic | 40.0% |
| GACTATTTGGATCCTTGCTA+AGG | + | chr2_1:4208618-4208637 | None:intergenic | 40.0% | |
| TCCAAATAGTCTAGCCAACT+TGG | - | chr2_1:4208627-4208646 | Msa0188970:intron | 40.0% | |
| ! | TCCAAGTTGGCTAGACTATT+TGG | + | chr2_1:4208631-4208650 | None:intergenic | 40.0% |
| ATTTCTCACCTGATCCAAGT+TGG | + | chr2_1:4208644-4208663 | None:intergenic | 40.0% | |
| ! | GTTCGAATGGTTTCCTCTTT+TGG | - | chr2_1:4208726-4208745 | Msa0188970:intron | 40.0% |
| AACTGTAAAATTTGCCGACC+AGG | + | chr2_1:4208909-4208928 | None:intergenic | 40.0% | |
| !!! | CTTTTTACTAGGTTGGTGCA+TGG | - | chr2_1:4208956-4208975 | Msa0188970:intron | 40.0% |
| AACGATATTGGGTGCTAGAA+TGG | + | chr2_1:4209238-4209257 | None:intergenic | 40.0% | |
| GAGAATGCAGCAACGATATT+GGG | + | chr2_1:4209249-4209268 | None:intergenic | 40.0% | |
| AGAGAATGCAGCAACGATAT+TGG | + | chr2_1:4209250-4209269 | None:intergenic | 40.0% | |
| ! | GTTGCTGCATTCTCTTTTTG+AGG | - | chr2_1:4209255-4209274 | Msa0188970:intron | 40.0% |
| AATGGCTATGGTGTGAATCA+TGG | - | chr2_1:4209363-4209382 | Msa0188970:CDS | 40.0% | |
| ! | AGTTTGGGCTCTTTTGTCAT+CGG | + | chr2_1:4209439-4209458 | None:intergenic | 40.0% |
| ! | ATTTTCTCGCCTCCAAATCA+AGG | + | chr2_1:4209621-4209640 | None:intergenic | 40.0% |
| ! | TCGAATCCTTTGATTGGTCA+GGG | + | chr2_1:4209687-4209706 | None:intergenic | 40.0% |
| TGAAAGAAGACTTGGAATCC+AGG | - | chr2_1:4209746-4209765 | Msa0188970:CDS | 40.0% | |
| TTGGCAAACGTATAGCATCA+TGG | - | chr2_1:4209854-4209873 | Msa0188970:CDS | 40.0% | |
| TAATTATCAGCCAACCCTCT+TGG | + | chr2_1:4209895-4209914 | None:intergenic | 40.0% | |
| TCACTGTTGTTAGTGTTTGG+AGG | + | chr2_1:4209923-4209942 | None:intergenic | 40.0% | |
| ! | ACTATACTTTGGAAGCGTGT+AGG | + | chr2_1:4210053-4210072 | None:intergenic | 40.0% |
| GATTGTTCCGTCTGTATCGA+AGG | + | chr2_1:4204740-4204759 | None:intergenic | 45.0% | |
| TCAAAGCGTGTTCGAAGTTG+TGG | + | chr2_1:4204777-4204796 | None:intergenic | 45.0% | |
| GTCAATGATTATGGAGGACG+CGG | + | chr2_1:4204824-4204843 | None:intergenic | 45.0% | |
| GATGGAAGAGAAGAAGCTGT+TGG | + | chr2_1:4204906-4204925 | None:intergenic | 45.0% | |
| TGGTTATGGGGTACATGCTT+TGG | - | chr2_1:4205091-4205110 | Msa0188970:CDS | 45.0% | |
| ! | AGGTTCGGTATTTCTCGTTG+GGG | - | chr2_1:4205307-4205326 | Msa0188970:intron | 45.0% |
| GTATTTCTCGTTGGGGATTG+AGG | - | chr2_1:4205314-4205333 | Msa0188970:intron | 45.0% | |
| ACCTGTTGACATGGAAAGGT+AGG | - | chr2_1:4205446-4205465 | Msa0188970:intron | 45.0% | |
| TCCTACCTTTCCATGTCAAC+AGG | + | chr2_1:4205450-4205469 | None:intergenic | 45.0% | |
| GTTGACATGGAAAGGTAGGA+AGG | - | chr2_1:4205450-4205469 | Msa0188970:intron | 45.0% | |
| !! | GACTCTAAGAGCATCCACAA+TGG | - | chr2_1:4206082-4206101 | Msa0188970:CDS | 45.0% |
| ! | AAAGGTGTGGGTCTCACTTA+AGG | - | chr2_1:4206293-4206312 | Msa0188970:intron | 45.0% |
| GAGGTCTTAAGTAAGACCCT+AGG | - | chr2_1:4206319-4206338 | Msa0188970:intron | 45.0% | |
| TAAGACCCTACCATTGTGGA+TGG | - | chr2_1:4206409-4206428 | Msa0188970:intron | 45.0% | |
| CTTAGACCATCCACAATGGT+AGG | + | chr2_1:4206418-4206437 | None:intergenic | 45.0% | |
| !! | ATAGGAAGTTTGTTGTGCCG+TGG | - | chr2_1:4206491-4206510 | Msa0188970:CDS | 45.0% |
| GAATTTCACTTTCAGGGCAG+TGG | + | chr2_1:4206521-4206540 | None:intergenic | 45.0% | |
| CTGCCCTGAAAGTGAAATTC+CGG | - | chr2_1:4206521-4206540 | Msa0188970:CDS | 45.0% | |
| CAGCCGGAATTTCACTTTCA+GGG | + | chr2_1:4206527-4206546 | None:intergenic | 45.0% | |
| AGGCTCGTTGTGTTAACCTT+GGG | + | chr2_1:4206582-4206601 | None:intergenic | 45.0% | |
| TAGGCTCGTTGTGTTAACCT+TGG | + | chr2_1:4206583-4206602 | None:intergenic | 45.0% | |
| AGGTTAACACAACGAGCCTA+TGG | - | chr2_1:4206583-4206602 | Msa0188970:intron | 45.0% | |
| ATTGGTCGGACACAACACAA+AGG | + | chr2_1:4207133-4207152 | None:intergenic | 45.0% | |
| GTTCACTCGGTTACAACTCT+AGG | + | chr2_1:4207247-4207266 | None:intergenic | 45.0% | |
| CAATAGGAGAATGCAAGAGG+GGG | - | chr2_1:4207277-4207296 | Msa0188970:intron | 45.0% | |
| CCCATCGTCCTGTTAAATTC+TGG | - | chr2_1:4207678-4207697 | Msa0188970:intron | 45.0% | |
| TGGTCGTCATATGTACACAC+AGG | - | chr2_1:4207811-4207830 | Msa0188970:intron | 45.0% | |
| ACCATACTCTTGGGACATGT+GGG | + | chr2_1:4207846-4207865 | None:intergenic | 45.0% | |
| AACCATACTCTTGGGACATG+TGG | + | chr2_1:4207847-4207866 | None:intergenic | 45.0% | |
| TCTGCTTGTGCAACCAAGTA+GGG | + | chr2_1:4207898-4207917 | None:intergenic | 45.0% | |
| TTCTGCTTGTGCAACCAAGT+AGG | + | chr2_1:4207899-4207918 | None:intergenic | 45.0% | |
| ! | GATACCTTCTCTAAGGAGAG+GGG | + | chr2_1:4207978-4207997 | None:intergenic | 45.0% |
| GTCATAGAGTTCTCCCATGT+CGG | + | chr2_1:4208172-4208191 | None:intergenic | 45.0% | |
| CATGGGAGAACTCTATGACA+TGG | - | chr2_1:4208173-4208192 | Msa0188970:intron | 45.0% | |
| ! | TTCTGGAAGGATCATTTGCG+GGG | - | chr2_1:4208413-4208432 | Msa0188970:intron | 45.0% |
| TAGTCTAGCCAACTTGGATC+AGG | - | chr2_1:4208633-4208652 | Msa0188970:intron | 45.0% | |
| GTCATGGAAAAGACTGATGG+CGG | + | chr2_1:4208785-4208804 | None:intergenic | 45.0% | |
| CTGGTCATGGAAAAGACTGA+TGG | + | chr2_1:4208788-4208807 | None:intergenic | 45.0% | |
| TTTCCATGACCAGTCGAACT+AGG | - | chr2_1:4208795-4208814 | Msa0188970:intron | 45.0% | |
| TTCCATGACCAGTCGAACTA+GGG | - | chr2_1:4208796-4208815 | Msa0188970:intron | 45.0% | |
| TAATCATGCCCTAGTTCGAC+TGG | + | chr2_1:4208807-4208826 | None:intergenic | 45.0% | |
| !! | GTGGACAGACCTAGTCTTTT+CGG | - | chr2_1:4209145-4209164 | Msa0188970:intron | 45.0% |
| CTTTACCGCAAGAATGGCTA+TGG | - | chr2_1:4209351-4209370 | Msa0188970:CDS | 45.0% | |
| TCACACCATAGCCATTCTTG+CGG | + | chr2_1:4209359-4209378 | None:intergenic | 45.0% | |
| CTATGGTGTGAATCATGGTG+TGG | - | chr2_1:4209368-4209387 | Msa0188970:CDS | 45.0% | |
| GACAAAAGAGCCCAAACTTC+AGG | - | chr2_1:4209441-4209460 | Msa0188970:CDS | 45.0% | |
| CTAGACGAATTGTAGCTGAG+TGG | - | chr2_1:4209590-4209609 | Msa0188970:CDS | 45.0% | |
| ! | GATTGGTCAGGGGATTGAAT+AGG | + | chr2_1:4209676-4209695 | None:intergenic | 45.0% |
| TCAATCCCCTGACCAATCAA+AGG | - | chr2_1:4209678-4209697 | Msa0188970:CDS | 45.0% | |
| ! | CGAATCCTTTGATTGGTCAG+GGG | + | chr2_1:4209686-4209705 | None:intergenic | 45.0% |
| ! | GTCGAATCCTTTGATTGGTC+AGG | + | chr2_1:4209688-4209707 | None:intergenic | 45.0% |
| TCGTGGACACAATTGAGACA+AGG | - | chr2_1:4209781-4209800 | Msa0188970:CDS | 45.0% | |
| CGTGGACACAATTGAGACAA+GGG | - | chr2_1:4209782-4209801 | Msa0188970:CDS | 45.0% | |
| !!! | TCAATTTTTTAATATTAAAA+AGG | - | chr2_1:4206275-4206294 | Msa0188970:intron | 5.0% |
| !! | TCATAATTATTAAAAAAAAA+AGG | - | chr2_1:4208857-4208876 | Msa0188970:intron | 5.0% |
| CTTGTAGGACATGTAGCTCC+TGG | - | chr2_1:4204520-4204539 | Msa0188970:three_prime_UTR | 50.0% | |
| !! | CTGTATCGAAGGGTTGGTGT+CGG | + | chr2_1:4204729-4204748 | None:intergenic | 50.0% |
| CACCAACCCTTCGATACAGA+CGG | - | chr2_1:4204730-4204749 | Msa0188970:three_prime_UTR | 50.0% | |
| TTCCGTCTGTATCGAAGGGT+TGG | + | chr2_1:4204735-4204754 | None:intergenic | 50.0% | |
| CGAACACGCTTTGATCTCCA+TGG | - | chr2_1:4204783-4204802 | Msa0188970:three_prime_UTR | 50.0% | |
| CTTTGTGTGAGATGCTGGGT+TGG | + | chr2_1:4206203-4206222 | None:intergenic | 50.0% | |
| GTGTGGGTCTCACTTAAGGT+TGG | - | chr2_1:4206297-4206316 | Msa0188970:intron | 50.0% | |
| TGGGTCTCACTTAAGGTTGG+AGG | - | chr2_1:4206300-4206319 | Msa0188970:intron | 50.0% | |
| ! | GAGGGGTCTTGTAAGACCTA+GGG | + | chr2_1:4206338-4206357 | None:intergenic | 50.0% |
| ! | TGAGGGGTCTTGTAAGACCT+AGG | + | chr2_1:4206339-4206358 | None:intergenic | 50.0% |
| CCTAATAGGTACCCCCATTG+TGG | + | chr2_1:4206371-4206390 | None:intergenic | 50.0% | |
| !! | CCACAATGGGGGTACCTATT+AGG | - | chr2_1:4206368-4206387 | Msa0188970:intron | 50.0% |
| !! | TGGGGGTACCTATTAGGTAC+CGG | - | chr2_1:4206374-4206393 | Msa0188970:intron | 50.0% |
| ! | TTCAGGGCAGTGGTTTTCCA+CGG | + | chr2_1:4206511-4206530 | None:intergenic | 50.0% |
| CCAGCCGGAATTTCACTTTC+AGG | + | chr2_1:4206528-4206547 | None:intergenic | 50.0% | |
| CCTGAAAGTGAAATTCCGGC+TGG | - | chr2_1:4206525-4206544 | Msa0188970:CDS | 50.0% | |
| TGTTAACCTTGGGGAGCGAT+CGG | + | chr2_1:4206572-4206591 | None:intergenic | 50.0% | |
| GGCTCGTTGTGTTAACCTTG+GGG | + | chr2_1:4206581-4206600 | None:intergenic | 50.0% | |
| TGGCTAATAATGTGGGGCTG+AGG | - | chr2_1:4206826-4206845 | Msa0188970:intron | 50.0% | |
| GTGGGGCTGAGGTTACAATT+TGG | - | chr2_1:4206837-4206856 | Msa0188970:intron | 50.0% | |
| CCATACTCTTGGGACATGTG+GGG | + | chr2_1:4207845-4207864 | None:intergenic | 50.0% | |
| AGAGGGGAAAGATGACATCC+AGG | + | chr2_1:4207962-4207981 | None:intergenic | 50.0% | |
| CTTTCCCCTCTCCTTAGAGA+AGG | - | chr2_1:4207971-4207990 | Msa0188970:intron | 50.0% | |
| TCTGGAAGGATCATTTGCGG+GGG | - | chr2_1:4208414-4208433 | Msa0188970:intron | 50.0% | |
| TATCTCCAGCAGCAGTCTCT+CGG | + | chr2_1:4208573-4208592 | None:intergenic | 50.0% | |
| ! | ACTGAAGGTACAGCATGTCC+TGG | - | chr2_1:4208888-4208907 | Msa0188970:intron | 50.0% |
| AAGGTACAGCATGTCCTGGT+CGG | - | chr2_1:4208892-4208911 | Msa0188970:intron | 50.0% | |
| CTAGCACCCTGTAACCAAAG+TGG | + | chr2_1:4209574-4209593 | None:intergenic | 50.0% | |
| TGAGTGGCCAGACCTTGATT+TGG | - | chr2_1:4209606-4209625 | Msa0188970:CDS | 50.0% | |
| !! | ATCGAAGGGTTGGTGTCGGT+CGG | + | chr2_1:4204725-4204744 | None:intergenic | 55.0% |
| GCTGATCACATGGGACCAGA+AGG | - | chr2_1:4204934-4204953 | Msa0188970:three_prime_UTR | 55.0% | |
| !! | GGGGGTACCTATTAGGTACC+GGG | - | chr2_1:4206375-4206394 | Msa0188970:intron | 55.0% |
| GTGAAATTCCGGCTGGACCT+CGG | - | chr2_1:4206532-4206551 | Msa0188970:CDS | 55.0% | |
| ACACGTGCACTCGTGGCTTT+AGG | - | chr2_1:4206606-4206625 | Msa0188970:intron | 55.0% | |
| !! | GCACTCGTGGCTTTAGGCTA+TGG | - | chr2_1:4206612-4206631 | Msa0188970:intron | 55.0% |
| AATGCAAGAGGGGGACGACA+TGG | - | chr2_1:4207286-4207305 | Msa0188970:intron | 55.0% | |
| CCCCACATGTCCCAAGAGTA+TGG | - | chr2_1:4207842-4207861 | Msa0188970:intron | 55.0% | |
| TCAGATTGTCCGGACCGACA+TGG | - | chr2_1:4208155-4208174 | Msa0188970:intron | 55.0% | |
| CAGATTGTCCGGACCGACAT+GGG | - | chr2_1:4208156-4208175 | Msa0188970:intron | 55.0% | |
| AGAGTTCTCCCATGTCGGTC+CGG | + | chr2_1:4208167-4208186 | None:intergenic | 55.0% | |
| GGGGGAGACCGTACCATATT+AGG | - | chr2_1:4208432-4208451 | Msa0188970:intron | 55.0% | |
| AAGTTCCGAGAGACTGCTGC+TGG | - | chr2_1:4208565-4208584 | Msa0188970:intron | 55.0% | |
| ! | TGCCCTAGTTCGACTGGTCA+TGG | + | chr2_1:4208801-4208820 | None:intergenic | 55.0% |
| !! | GTGGCCAGACCTTGATTTGG+AGG | - | chr2_1:4209609-4209628 | Msa0188970:CDS | 55.0% |
| CTCGCCTCCAAATCAAGGTC+TGG | + | chr2_1:4209616-4209635 | None:intergenic | 55.0% | |
| CCACGAATCACAACTCTGCC+TGG | + | chr2_1:4209767-4209786 | None:intergenic | 55.0% | |
| CCAGGCAGAGTTGTGATTCG+TGG | - | chr2_1:4209764-4209783 | Msa0188970:CDS | 55.0% | |
| !! | TCGAAGGGTTGGTGTCGGTC+GGG | + | chr2_1:4204724-4204743 | None:intergenic | 60.0% |
| GGCGTAGGCGAAGAAAGCCA+TGG | + | chr2_1:4204803-4204822 | None:intergenic | 60.0% | |
| GATTATGGAGGACGCGGCGT+AGG | + | chr2_1:4204818-4204837 | None:intergenic | 60.0% | |
| ! | CGGTGAGTTGGATTGCACCG+AGG | + | chr2_1:4206552-4206571 | None:intergenic | 60.0% |
| TTGGGGAGCGATCGGTGAGT+TGG | + | chr2_1:4206564-4206583 | None:intergenic | 60.0% | |
| AACTCACCGATCGCTCCCCA+AGG | - | chr2_1:4206563-4206582 | Msa0188970:CDS | 60.0% | |
| CCACGAGTGCACGTGTCCAT+AGG | + | chr2_1:4206602-4206621 | None:intergenic | 60.0% | |
| CCTATGGACACGTGCACTCG+TGG | - | chr2_1:4206599-4206618 | Msa0188970:intron | 60.0% | |
| !! | CGAAGGGTTGGTGTCGGTCG+GGG | + | chr2_1:4204723-4204742 | None:intergenic | 65.0% |
| GGATTGCACCGAGGTCCAGC+CGG | + | chr2_1:4206543-4206562 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 4204511 | 4210206 | 4204511 | ID=Msa0188970;Name=Msa0188970 |
| chr2_1 | mRNA | 4204511 | 4210206 | 4204511 | ID=Msa0188970-mRNA-1;Parent=Msa0188970;Name=Msa0188970-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0.5|1|1|1|4|483|423 |
| chr2_1 | exon | 4204511 | 4205131 | 4204511 | ID=Msa0188970-mRNA-1:exon:1894;Parent=Msa0188970-mRNA-1 |
| chr2_1 | exon | 4206063 | 4206177 | 4206063 | ID=Msa0188970-mRNA-1:exon:1893;Parent=Msa0188970-mRNA-1 |
| chr2_1 | exon | 4206443 | 4206582 | 4206443 | ID=Msa0188970-mRNA-1:exon:1892;Parent=Msa0188970-mRNA-1 |
| chr2_1 | exon | 4209328 | 4210206 | 4209328 | ID=Msa0188970-mRNA-1:exon:1891;Parent=Msa0188970-mRNA-1 |
| chr2_1 | CDS | 4209328 | 4210206 | 4209328 | ID=Msa0188970-mRNA-1:cds;Parent=Msa0188970-mRNA-1 |
| chr2_1 | CDS | 4206443 | 4206582 | 4206443 | ID=Msa0188970-mRNA-1:cds;Parent=Msa0188970-mRNA-1 |
| chr2_1 | CDS | 4206063 | 4206177 | 4206063 | ID=Msa0188970-mRNA-1:cds;Parent=Msa0188970-mRNA-1 |
| chr2_1 | CDS | 4204994 | 4205131 | 4204994 | ID=Msa0188970-mRNA-1:cds;Parent=Msa0188970-mRNA-1 |
| chr2_1 | three_prime_UTR | 4204511 | 4204993 | 4204511 | ID=Msa0188970-mRNA-1:three_prime_utr;Parent=Msa0188970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
