AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1132850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132850 MtrunA17_Chr5g0398901 97.938 582 11 1 1 582 1 581 0.0 1177
Msa1132850 MtrunA17_Chr5g0398951 81.319 91 16 1 242 332 4 93 4.94e-42 146
Msa1132850 MtrunA17_Chr3g0097231 31.651 218 119 6 2 199 11 218 1.07e-19 92.4
Msa1132850 MtrunA17_Chr3g0097231 32.759 116 78 0 393 508 11 126 4.11e-13 72.0
Msa1132850 MtrunA17_Chr1g0166441 36.441 118 75 0 397 514 15 132 3.99e-19 89.0
Msa1132850 MtrunA17_Chr1g0166441 35.354 99 64 0 6 104 15 113 1.12e-13 72.4
Msa1132850 MtrunA17_Chr7g0274241 39.655 116 70 0 2 117 335 450 6.72e-17 83.6
Msa1132850 MtrunA17_Chr7g0274241 34.211 114 75 0 393 506 335 448 1.24e-16 82.8
Msa1132850 MtrunA17_Chr1g0160051 36.937 111 69 1 1 110 180 290 1.77e-16 82.4
Msa1132850 MtrunA17_Chr1g0160051 31.092 119 81 1 385 502 173 291 2.58e-12 69.3
Msa1132850 MtrunA17_Chr5g0397161 35.294 119 77 0 1 119 1 119 2.22e-16 81.3
Msa1132850 MtrunA17_Chr5g0397161 28.205 117 84 0 392 508 1 117 2.59e-11 65.5
Msa1132850 MtrunA17_Chr6g0470241 39.583 96 58 0 1 96 1 96 8.04e-14 73.2
Msa1132850 MtrunA17_Chr6g0470241 26.144 153 110 2 392 543 1 151 3.93e-11 65.1
Msa1132850 MtrunA17_Chr2g0316221 30.476 105 73 0 397 501 466 570 4.86e-13 72.0
Msa1132850 MtrunA17_Chr7g0237741 32.110 109 67 1 2 103 95 203 1.72e-12 68.2
Msa1132850 MtrunA17_Chr7g0237741 27.536 138 85 2 372 502 82 211 5.06e-11 63.5
Msa1132850 MtrunA17_Chr4g0050371 37.374 99 62 0 397 495 492 590 2.57e-12 69.7
Msa1132850 MtrunA17_Chr8g0393041 29.630 135 89 1 367 495 447 581 1.07e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132850 AT1G62740.1 73.639 588 132 4 1 582 1 571 0.0 882
Msa1132850 AT4G12400.2 72.213 583 136 4 1 582 1 558 0.0 882
Msa1132850 AT1G12270.1 73.424 587 136 6 1 582 1 572 0.0 848
Msa1132850 AT4G12400.1 71.481 547 130 4 1 546 1 522 0.0 819
Msa1132850 AT4G12400.1 32.258 186 125 1 392 576 1 186 5.26e-22 100
Msa1132850 AT1G04190.1 40.816 98 58 0 6 103 19 116 7.95e-18 85.5
Msa1132850 AT1G04190.1 39.623 106 64 0 397 502 19 124 1.35e-17 84.7
Msa1132850 AT4G08320.1 31.361 169 112 3 1 168 174 339 4.74e-17 84.3
Msa1132850 AT4G08320.1 33.094 139 86 3 372 508 158 291 8.14e-14 74.3
Msa1132850 AT4G08320.2 37.069 116 72 1 1 115 174 289 9.89e-17 83.2
Msa1132850 AT4G08320.2 33.094 139 86 3 372 508 158 291 7.35e-14 74.3
Msa1132850 AT3G04710.3 40.000 110 66 0 8 117 558 667 6.30e-16 81.6
Msa1132850 AT3G04710.3 30.841 107 74 0 399 505 558 664 2.52e-13 73.6
Msa1132850 AT3G04710.1 40.000 110 66 0 8 117 334 443 7.11e-16 80.9
Msa1132850 AT3G04710.1 30.841 107 74 0 399 505 334 440 1.52e-13 73.6
Msa1132850 AT3G04710.2 40.000 110 66 0 8 117 333 442 7.27e-16 80.9
Msa1132850 AT3G04710.2 30.841 107 74 0 399 505 333 439 1.47e-13 73.6
Msa1132850 AT2G42810.1 26.636 214 135 4 2 199 13 220 2.25e-15 79.3
Msa1132850 AT2G42810.1 31.429 140 96 0 389 528 9 148 7.00e-15 77.8
Msa1132850 AT2G42810.5 26.636 214 135 4 2 199 13 220 2.25e-15 79.3
Msa1132850 AT2G42810.5 31.429 140 96 0 389 528 9 148 7.00e-15 77.8
Msa1132850 AT2G42810.4 26.636 214 135 4 2 199 13 220 2.25e-15 79.3
Msa1132850 AT2G42810.4 31.429 140 96 0 389 528 9 148 7.00e-15 77.8
Msa1132850 AT4G11260.1 36.449 107 68 0 1 107 1 107 6.02e-15 77.0
Msa1132850 AT2G42810.3 31.429 140 96 0 389 528 9 148 7.22e-15 78.2
Msa1132850 AT2G42810.3 33.621 116 77 0 2 117 13 128 1.01e-14 77.4
Msa1132850 AT2G42810.2 31.429 140 96 0 389 528 9 148 7.37e-15 78.2
Msa1132850 AT2G42810.2 33.621 116 77 0 2 117 13 128 1.09e-14 77.4
Msa1132850 AT4G22670.1 36.893 103 65 0 2 104 123 225 8.80e-13 71.2
Msa1132850 AT3G17970.1 35.922 103 66 0 393 495 474 576 3.24e-12 69.7
Msa1132850 AT1G53300.1 28.829 111 79 0 391 501 463 573 6.81e-12 68.9
Msa1132850 AT1G78120.2 29.600 125 87 1 400 523 166 290 6.65e-11 65.5
Msa1132850 AT1G78120.1 29.600 125 87 1 400 523 166 290 7.29e-11 65.5
Msa1132850 AT4G23570.1 27.473 182 118 5 25 202 25 196 7.45e-11 64.3
Msa1132850 AT4G23570.2 27.473 182 118 5 25 202 25 196 7.45e-11 64.3
Msa1132850 AT3G58620.2 26.923 156 97 3 349 502 418 558 7.88e-11 65.5

Find 224 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTCATCAGCCAAATT+TGG 0.136072 7_3:+85689770 None:intergenic
CAAATACAAATTCAAATTAT+TGG 0.139538 7_3:+85692267 None:intergenic
TTCTACTAGGGTCTGGGGTT+GGG 0.160704 7_3:+85692989 None:intergenic
GATTTCAAGGGTTCATTATT+AGG 0.169330 7_3:+85692481 None:intergenic
CAGCTTCATTGAGTTTCTTC+AGG 0.191835 7_3:+85689834 None:intergenic
AGAATACTTCGATCCAAATT+TGG 0.199740 7_3:-85689783 Msa1132850:CDS
TTTACTTTGTTGATGTTGAT+TGG 0.217020 7_3:+85692872 None:intergenic
TTGAGTTTCTTCAGGGTGTC+TGG 0.227086 7_3:+85689842 None:intergenic
TTGTTGTTCTAGTTCTTTCT+TGG 0.227451 7_3:+85689805 None:intergenic
AGGTTCATTGCTTAGAAATT+AGG 0.238421 7_3:-85688363 Msa1132850:three_prime_UTR
AGTTGAAATCGAAAGGGTTT+TGG 0.241292 7_3:+85692815 None:intergenic
TTGAATTTGACAATATTATA+TGG 0.247524 7_3:+85688000 None:intergenic
CAGAGAGTTATGCAAGCTTT+TGG 0.262229 7_3:-85692238 Msa1132850:CDS
TCCATCAAATTTACTTCATC+TGG 0.263023 7_3:+85688710 None:intergenic
TTCCGGCACTGATCAGCTTT+TGG 0.271295 7_3:+85688737 None:intergenic
AAATACAAATTCAAATTATT+GGG 0.271371 7_3:+85692268 None:intergenic
AGTGGGTTAGGTTATATTAT+AGG 0.277586 7_3:+85692942 None:intergenic
GTCCATCACACCCGGGTTCT+TGG 0.290667 7_3:+85688765 None:intergenic
TTACTTTGTTGATGTTGATT+GGG 0.290830 7_3:+85692873 None:intergenic
CATCATGTTTCAACCCTTCC+TGG 0.293057 7_3:+85689267 None:intergenic
GCAGGTATTGGTTGATTTCC+AGG 0.298727 7_3:-85688815 Msa1132850:intron
AGCTGCATGTTACACAAAAC+TGG 0.310459 7_3:-85689420 Msa1132850:CDS
TCTACTAGGGTCTGGGGTTG+GGG 0.311038 7_3:+85692990 None:intergenic
TCCTCCATTGGCTCCGGTTC+CGG 0.312001 7_3:+85692088 None:intergenic
TCCGAACTGGACGGCATATC+AGG 0.312824 7_3:+85692166 None:intergenic
AAGCAAACCTGTCTCATAAC+AGG 0.314328 7_3:+85688913 None:intergenic
TTCCTATTGTGACTTTGATT+TGG 0.317739 7_3:-85688651 Msa1132850:three_prime_UTR
GGCAATGCCTGAAGGTTTAA+AGG 0.321704 7_3:-85689396 Msa1132850:CDS
TCCAGATGAAGTAAATTTGA+TGG 0.333610 7_3:-85688711 Msa1132850:exon
GCTGATGAGGAGAGAGAAAA+AGG 0.335378 7_3:-85689761 Msa1132850:intron
GTATGTCTTGTGTTTGTTGT+AGG 0.335866 7_3:-85688140 Msa1132850:three_prime_UTR
GTTTGTTGTAGGCAGTATTT+TGG 0.336116 7_3:-85688129 Msa1132850:three_prime_UTR
TTAAAGCGTCAGTGTAATTC+TGG 0.337616 7_3:+85692635 None:intergenic
AAAACTGAACCGCACCCTTC+CGG 0.339040 7_3:+85689324 None:intergenic
GTATGTTCCTGTGCAGCCTT+TGG 0.339809 7_3:+85688787 None:intergenic
TCTGCATCCTTTAAACCTTC+AGG 0.340625 7_3:+85689389 None:intergenic
TGTCTCTCCTTCAACTCTTC+AGG 0.344507 7_3:+85689069 None:intergenic
TGGTTATTCAATCTAAATCT+AGG 0.345616 7_3:-85688487 Msa1132850:three_prime_UTR
AATAATGAACCCTTGAAATC+AGG 0.348019 7_3:-85692478 Msa1132850:CDS
TGCATCATCTTCACAAAATC+AGG 0.348278 7_3:+85692307 None:intergenic
GTTCTACTAGGGTCTGGGGT+TGG 0.352820 7_3:+85692988 None:intergenic
TTTGTTGAATAAACGAAAAC+GGG 0.358914 7_3:-85688318 Msa1132850:three_prime_UTR
GGAATACAGGACGTGGTTGG+TGG 0.360993 7_3:+85692684 None:intergenic
AAACTGAACCGCACCCTTCC+GGG 0.362337 7_3:+85689325 None:intergenic
GAACCCCTTCAAGCAATTCC+TGG 0.364967 7_3:+85689237 None:intergenic
TGCGTTTACAATGCAGTAAC+AGG 0.368288 7_3:-85688433 Msa1132850:three_prime_UTR
TTATTCGAAAGCTTTGGAAT+TGG 0.368370 7_3:-85691954 Msa1132850:CDS
TTACTTCATCTGGACAATTC+CGG 0.371932 7_3:+85688720 None:intergenic
TAATTTGAATTTGTATTTGA+AGG 0.375764 7_3:-85692263 Msa1132850:CDS
TAACCGTGCTGCTGTATACT+TGG 0.383148 7_3:-85691906 Msa1132850:CDS
CTGTAACCCTTTGACCAATC+AGG 0.384513 7_3:+85692583 None:intergenic
CGTCTCGGTGCCGCTCATCT+TGG 0.384527 7_3:-85692559 Msa1132850:CDS
ATTGGCTCCGGTTCCGGCTC+AGG 0.388295 7_3:+85692094 None:intergenic
GGAGAATGCAGCGTTGCCTT+TGG 0.390754 7_3:+85692762 None:intergenic
TCTGCATTATTCGAAAGCTT+TGG 0.393752 7_3:-85691960 Msa1132850:CDS
TCCGCCTGCTTTGCCACCTC+AGG 0.396836 7_3:+85692124 None:intergenic
GTCTCATAACAGGGTCTTGA+AGG 0.401205 7_3:+85688923 None:intergenic
TTCTAGGCCACGTTCTGCGC+CGG 0.406464 7_3:-85692419 Msa1132850:CDS
CGATAGAGAGAGAGTGGGTT+AGG 0.407347 7_3:+85692930 None:intergenic
TGAAGGATGTTCTGAATCTC+TGG 0.407523 7_3:+85688940 None:intergenic
TCTTCAGGGTGTCTGGGTTA+CGG 0.408287 7_3:+85689849 None:intergenic
TAGAGAGTTCTACTAGGGTC+TGG 0.408614 7_3:+85692982 None:intergenic
ATTTAGAGCAACGACCTTGA+TGG 0.412320 7_3:+85688202 None:intergenic
CAGCGGATCGGTTGGAATAC+AGG 0.412654 7_3:+85692671 None:intergenic
TGAAGATAAACCCTAGTTGT+AGG 0.413840 7_3:+85692334 None:intergenic
GTGTAATGCTTAATAGCTTC+AGG 0.414719 7_3:+85689574 None:intergenic
GCGCCGGGTGCCAATCCGTT+TGG 0.416911 7_3:-85692403 Msa1132850:CDS
TGGATTGGAAGTACAATAGT+TGG 0.420764 7_3:-85688615 Msa1132850:three_prime_UTR
TCTAGGCCACGTTCTGCGCC+GGG 0.422100 7_3:-85692418 Msa1132850:CDS
GATTTGGTATTGGAATAGAT+TGG 0.424663 7_3:-85688635 Msa1132850:three_prime_UTR
GAAAGAATATGAAAAGGCTT+TGG 0.427879 7_3:-85689297 Msa1132850:CDS
ATCGGCTAAACCTGATTTCA+AGG 0.428004 7_3:+85692468 None:intergenic
AGCTTCATTGAGTTTCTTCA+GGG 0.428316 7_3:+85689835 None:intergenic
TTGTGACTTTGATTTGGTAT+TGG 0.428426 7_3:-85688645 Msa1132850:three_prime_UTR
GCTGTTTCAGCTTACAAGAA+AGG 0.435873 7_3:-85692517 Msa1132850:CDS
TGCTGCTGTATACTTGGAAA+TGG 0.437857 7_3:-85691900 Msa1132850:CDS
GGCTTTAGCTTCGTCGGCCA+TGG 0.439401 7_3:+85692783 None:intergenic
TACTTTGTTGATGTTGATTG+GGG 0.441458 7_3:+85692874 None:intergenic
TGAACCTGAGGTGGCAAAGC+AGG 0.443025 7_3:-85692128 Msa1132850:CDS
CTCAAACCTGATTGGTCAAA+GGG 0.450036 7_3:-85692589 Msa1132850:CDS
TGAAGAGTTGAAGGAGAGAC+AGG 0.450058 7_3:-85689067 Msa1132850:intron
TGAGTTTCTTCAGGGTGTCT+GGG 0.451649 7_3:+85689843 None:intergenic
GTTTGTTGAATAAACGAAAA+CGG 0.451756 7_3:-85688319 Msa1132850:three_prime_UTR
GGTTGAGCCTGAGCCGGAAC+CGG 0.452769 7_3:-85692101 Msa1132850:CDS
CTGTTTCAGCTTACAAGAAA+GGG 0.455044 7_3:-85692516 Msa1132850:CDS
GCACCTCTCTTTGCAAGAAA+AGG 0.455427 7_3:-85688383 Msa1132850:three_prime_UTR
GGAGGTGGCTGATGAGGAGA+AGG 0.455482 7_3:-85692068 Msa1132850:CDS
TCATCAGCCACCTCCTCCAT+TGG 0.457433 7_3:+85692076 None:intergenic
TACCAAATCAAAGTCACAAT+AGG 0.459976 7_3:+85688649 None:intergenic
TGGATCTTGTCCATCACACC+CGG 0.459995 7_3:+85688757 None:intergenic
GAGGAAGGCTGAGGCGCAGA+AGG 0.460304 7_3:-85692035 Msa1132850:CDS
TCAAGACCCTGTTATGAGAC+AGG 0.467657 7_3:-85688920 Msa1132850:intron
CTTAATGTTAAGATTGGAAG+AGG 0.468931 7_3:-85692208 Msa1132850:CDS
AGCTCTCTTCCTCTCCGAAC+TGG 0.469541 7_3:+85692153 None:intergenic
GCCTGATATGCCGTCCAGTT+CGG 0.472399 7_3:-85692167 Msa1132850:CDS
GTCGTGTGCATGCTTTCAAT+TGG 0.476239 7_3:-85688507 Msa1132850:three_prime_UTR
AGGAACTGCCATGGGTAAAA+CGG 0.477231 7_3:-85689933 Msa1132850:CDS
CGATCCAAATTTGGCTGATG+AGG 0.478253 7_3:-85689774 Msa1132850:CDS
GGATTGGAAGTACAATAGTT+GGG 0.482953 7_3:-85688614 Msa1132850:three_prime_UTR
TGTAACTCCTGAAGAGTTGA+AGG 0.487207 7_3:-85689076 Msa1132850:CDS
TTTAGAGCAACGACCTTGAT+GGG 0.487649 7_3:+85688203 None:intergenic
AGAGAGTTCTACTAGGGTCT+GGG 0.488562 7_3:+85692983 None:intergenic
TTTCATGAAAGAATATGAAA+AGG 0.488950 7_3:-85689303 Msa1132850:CDS
GAAGTAAATTTGATGGAAGA+TGG 0.489595 7_3:-85688704 Msa1132850:exon
TTAGCTTCGTCGGCCATGGA+TGG 0.491333 7_3:+85692787 None:intergenic
TTGAACAATTCAGTCAGAAA+AGG 0.492536 7_3:-85688045 Msa1132850:three_prime_UTR
TACTGCTGATCCTACAACTA+GGG 0.494571 7_3:-85692344 Msa1132850:CDS
GGAAAATCCAAAGGCTGCAC+AGG 0.497888 7_3:-85688794 Msa1132850:CDS
GCGCAGAAGGAGAAGGAGGC+TGG 0.498289 7_3:-85692022 Msa1132850:CDS
GGTATTGGAATAGATTGGAT+TGG 0.499629 7_3:-85688630 Msa1132850:three_prime_UTR
GTTAACTAGAGAGTTCTACT+AGG 0.502412 7_3:+85692976 None:intergenic
ACCCTTCCGGGTATAACCCT+TGG 0.502655 7_3:+85689337 None:intergenic
GCCACCTCCTCCATTGGCTC+CGG 0.504102 7_3:+85692082 None:intergenic
TGAGCCGGAACCGGAGCCAA+TGG 0.504535 7_3:-85692092 Msa1132850:CDS
ATCCAAAAGCTGATCAGTGC+CGG 0.507708 7_3:-85688739 Msa1132850:CDS
TATAACCCTTGGTGAAGGTC+GGG 0.507749 7_3:+85689348 None:intergenic
ACCGGAGCCAATGGAGGAGG+TGG 0.508880 7_3:-85692083 Msa1132850:CDS
AACAACCAGGAATTGCTTGA+AGG 0.509120 7_3:-85689242 Msa1132850:CDS
GCCTTTGGCTTTAGCTTCGT+CGG 0.510652 7_3:+85692777 None:intergenic
GTAAGTTTCGCCCACATCTC+CGG 0.511152 7_3:+85692364 None:intergenic
GGCGGAGGTTGAGCCTGAGC+CGG 0.511864 7_3:-85692107 Msa1132850:CDS
AGGAGAAGGAAGTGAAGCAG+AGG 0.515007 7_3:-85692054 Msa1132850:CDS
GATGATGCAAGATATTCAAA+AGG 0.517290 7_3:-85692293 Msa1132850:CDS
AAGAGCCGATAGAGAGAGAG+TGG 0.517520 7_3:+85692924 None:intergenic
AGGAGTTACATCCCCACGAC+TGG 0.518165 7_3:+85689089 None:intergenic
TACCAAGAACCCGGGTGTGA+TGG 0.520879 7_3:-85688767 Msa1132850:CDS
AGCGTGAGCAGCGGATCGGT+TGG 0.522057 7_3:+85692663 None:intergenic
GTATAACCCTTGGTGAAGGT+CGG 0.529921 7_3:+85689347 None:intergenic
TTGCATAAAAGATTGTGATA+AGG 0.530466 7_3:-85690020 Msa1132850:CDS
AATACAGGACGTGGTTGGTG+GGG 0.535814 7_3:+85692686 None:intergenic
ATACAGGACGTGGTTGGTGG+GGG 0.536596 7_3:+85692687 None:intergenic
GCAAGAGCTTTGACAAGGAA+AGG 0.536678 7_3:-85689953 Msa1132850:CDS
AATGGAGGAGGTGGCTGATG+AGG 0.538534 7_3:-85692074 Msa1132850:CDS
AGCAGCACGGTTAGTGAGGA+AGG 0.539890 7_3:+85691916 None:intergenic
TGAGGTGGCAAAGCAGGCGG+AGG 0.540052 7_3:-85692122 Msa1132850:CDS
CCGTCGAACTCAAACCTGAT+TGG 0.540548 7_3:-85692597 Msa1132850:CDS
AAAAGCATCACCAAACGGAT+TGG 0.541023 7_3:+85692393 None:intergenic
TTTCAACTCCGATCCATCCA+TGG 0.541143 7_3:-85692800 Msa1132850:exon
GAATACAGGACGTGGTTGGT+GGG 0.541180 7_3:+85692685 None:intergenic
GGGTTATACCCGGAAGGGTG+CGG 0.542682 7_3:-85689333 Msa1132850:CDS
CCAATCAGGTTTGAGTTCGA+CGG 0.546460 7_3:+85692597 None:intergenic
GGCTGAGGCGCAGAAGGAGA+AGG 0.547847 7_3:-85692029 Msa1132850:CDS
ACAACCAGGAATTGCTTGAA+GGG 0.548142 7_3:-85689241 Msa1132850:CDS
GAAACTCAATGAAGCTGAGA+AGG 0.551120 7_3:-85689828 Msa1132850:CDS
GCTGCTGTATACTTGGAAAT+GGG 0.551340 7_3:-85691899 Msa1132850:CDS
GGCAACGCTGCATTCTCCTC+CGG 0.551432 7_3:-85692757 Msa1132850:CDS
GGAACCGGAGCCAATGGAGG+AGG 0.554085 7_3:-85692086 Msa1132850:CDS
GGATCGGAGTTGAAATCGAA+AGG 0.555129 7_3:+85692808 None:intergenic
AGCTTTGGAATTGGATGATG+AGG 0.555608 7_3:-85691945 Msa1132850:CDS
GAAGAGAGCTGCTGAACCTG+AGG 0.556646 7_3:-85692140 Msa1132850:CDS
TCCTCATTGAACAATTGAGT+CGG 0.556777 7_3:-85688095 Msa1132850:three_prime_UTR
ATAAACGAAAACGGGGAAAG+TGG 0.560542 7_3:-85688310 Msa1132850:three_prime_UTR
AAATTAATAGAACCAGTCGT+GGG 0.560810 7_3:-85689101 Msa1132850:CDS
ACTCAAACCTGATTGGTCAA+AGG 0.563775 7_3:-85692590 Msa1132850:CDS
TCAAAGGGTTACAGCCGTCT+CGG 0.565098 7_3:-85692574 Msa1132850:CDS
ATAAGTTATCATGAGTGAGA+AGG 0.565958 7_3:-85688181 Msa1132850:three_prime_UTR
CTAACCCACTCTCTCTCTAT+CGG 0.567739 7_3:-85692929 Msa1132850:five_prime_UTR
TGGAAGAGGTGGTGATGATG+TGG 0.569802 7_3:-85692194 Msa1132850:CDS
TGTGATAAGGCTGTTGAAAG+AGG 0.569985 7_3:-85690007 Msa1132850:CDS
TAATGCTGCGTATAAGAAGA+AGG 0.570012 7_3:-85691999 Msa1132850:CDS
TCACCAAACGGATTGGCACC+CGG 0.570986 7_3:+85692400 None:intergenic
CAAGATGAGCGGCACCGAGA+CGG 0.571843 7_3:+85692560 None:intergenic
TGTATACTTGGAAATGGGAA+AGG 0.572009 7_3:-85691894 Msa1132850:intron
TTGGCACCCGGCGCAGAACG+TGG 0.574389 7_3:+85692412 None:intergenic
CACCAAGGGTTATACCCGGA+AGG 0.575257 7_3:-85689339 Msa1132850:CDS
CTTTGGAAACATACCAGGAA+GGG 0.575984 7_3:-85689280 Msa1132850:CDS
AATTGCTTGAAGGGGTTCGA+AGG 0.576444 7_3:-85689232 Msa1132850:intron
TTCGTCGGCCATGGATGGAT+CGG 0.580173 7_3:+85692792 None:intergenic
TTAACTAGAGAGTTCTACTA+GGG 0.580605 7_3:+85692977 None:intergenic
GCTGCATGTTACACAAAACT+GGG 0.580641 7_3:-85689419 Msa1132850:CDS
ACCTGAGGTGGCAAAGCAGG+CGG 0.581309 7_3:-85692125 Msa1132850:CDS
CCGGGTATAACCCTTGGTGA+AGG 0.581722 7_3:+85689343 None:intergenic
GAAGGAAGTGAAGCAGAGGA+AGG 0.582452 7_3:-85692050 Msa1132850:CDS
AGTGAAGCAGAGGAAGGCTG+AGG 0.583668 7_3:-85692044 Msa1132850:CDS
TGAGGCGCAGAAGGAGAAGG+AGG 0.586945 7_3:-85692026 Msa1132850:CDS
ATACAGCAGCACGGTTAGTG+AGG 0.589306 7_3:+85691912 None:intergenic
GAGAGCTGCTGAACCTGAGG+TGG 0.589705 7_3:-85692137 Msa1132850:CDS
CAAATTAATAGAACCAGTCG+TGG 0.592861 7_3:-85689102 Msa1132850:CDS
ACAAGGAAAGGAACTGCCAT+GGG 0.594542 7_3:-85689941 Msa1132850:CDS
GACAAGGAAAGGAACTGCCA+TGG 0.596247 7_3:-85689942 Msa1132850:CDS
GCCGGAACCGGAGCCAATGG+AGG 0.596557 7_3:-85692089 Msa1132850:CDS
ATGTCGAGCTGCTTGCTATG+AGG 0.597876 7_3:-85688278 Msa1132850:three_prime_UTR
TTACTGCTGATCCTACAACT+AGG 0.598575 7_3:-85692345 Msa1132850:CDS
GATCGGAGTTGAAATCGAAA+GGG 0.604392 7_3:+85692809 None:intergenic
AAAGGCTTTGGAAACATACC+AGG 0.604647 7_3:-85689285 Msa1132850:CDS
ACCAAGGGTTATACCCGGAA+GGG 0.604794 7_3:-85689338 Msa1132850:CDS
AATGTTAAGATTGGAAGAGG+TGG 0.604956 7_3:-85692205 Msa1132850:CDS
TCGGCTAAACCTGATTTCAA+GGG 0.605511 7_3:+85692469 None:intergenic
GAGAAGCGTGAGCAGCGGAT+CGG 0.606528 7_3:+85692659 None:intergenic
GATGGCGGTTGCGAAATCGC+CGG 0.612453 7_3:+85692738 None:intergenic
CAACCAGGAATTGCTTGAAG+GGG 0.617312 7_3:-85689240 Msa1132850:CDS
TGATTTCCAGGAAAATCCAA+AGG 0.618569 7_3:-85688803 Msa1132850:CDS
GCTTTGGAAACATACCAGGA+AGG 0.619719 7_3:-85689281 Msa1132850:CDS
ACAGGAACATACCAAGAACC+CGG 0.627654 7_3:-85688776 Msa1132850:CDS
CTTGACCCGACCTTCACCAA+GGG 0.628031 7_3:-85689353 Msa1132850:CDS
CAGGCAATACGAGTCTCTGT+AGG 0.628713 7_3:-85688414 Msa1132850:three_prime_UTR
ATCGGTTGGAATACAGGACG+TGG 0.632535 7_3:+85692677 None:intergenic
GCCGACGAAGCTAAAGCCAA+AGG 0.634082 7_3:-85692778 Msa1132850:CDS
CTCTTCCTCTCCGAACTGGA+CGG 0.634577 7_3:+85692157 None:intergenic
GGCGGTTGCGAAATCGCCGG+AGG 0.634986 7_3:+85692741 None:intergenic
CCTTCACCAAGGGTTATACC+CGG 0.641665 7_3:-85689343 Msa1132850:CDS
ACCGACTCAATTGTTCAATG+AGG 0.643351 7_3:+85688094 None:intergenic
ACTTTGTTGATGTTGATTGG+GGG 0.644256 7_3:+85692875 None:intergenic
TGATGGCATCTGAGAAGTGA+CGG 0.645347 7_3:+85692716 None:intergenic
GTTGGAATACAGGACGTGGT+TGG 0.650861 7_3:+85692681 None:intergenic
GAGAGTTCTACTAGGGTCTG+GGG 0.653088 7_3:+85692984 None:intergenic
GGATCTTGTCCATCACACCC+GGG 0.653989 7_3:+85688758 None:intergenic
AGCAAACCTGTCTCATAACA+GGG 0.656878 7_3:+85688914 None:intergenic
GAAACATGATGCAAACAACC+AGG 0.657221 7_3:-85689255 Msa1132850:CDS
GCTTGACCCGACCTTCACCA+AGG 0.659770 7_3:-85689354 Msa1132850:CDS
AATTAATAGAACCAGTCGTG+GGG 0.662286 7_3:-85689100 Msa1132850:CDS
ATCTGAGAAGTGACGGATGG+CGG 0.664337 7_3:+85692723 None:intergenic
CTGGAGAGAAGCGTGAGCAG+CGG 0.667719 7_3:+85692654 None:intergenic
AGAGCCGATAGAGAGAGAGT+GGG 0.669299 7_3:+85692925 None:intergenic
GGCATCTGAGAAGTGACGGA+TGG 0.670607 7_3:+85692720 None:intergenic
TGATAGCAAGAGCTTTGACA+AGG 0.676277 7_3:-85689958 Msa1132850:CDS
CAGGAACATACCAAGAACCC+GGG 0.680404 7_3:-85688775 Msa1132850:CDS
TAGGTGCAAGTGTAATGTTG+TGG 0.681227 7_3:-85688344 Msa1132850:three_prime_UTR
TTTCCAAGTATACAGCAGCA+CGG 0.692729 7_3:+85691903 None:intergenic
CTGCATGTTACACAAAACTG+GGG 0.696032 7_3:-85689418 Msa1132850:CDS
TTGAGAAAGACCAAGATGAG+CGG 0.707072 7_3:+85692549 None:intergenic
TTGTTGAATAAACGAAAACG+GGG 0.715300 7_3:-85688317 Msa1132850:three_prime_UTR
TGCATGTTACACAAAACTGG+GGG 0.723034 7_3:-85689417 Msa1132850:CDS
ATATGCCGTCCAGTTCGGAG+AGG 0.733223 7_3:-85692162 Msa1132850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACAAATTCAAATTATT+GGG + chr7_3:85688696-85688715 None:intergenic 10.0%
!! TTTGTCAAAAATATATAAAT+AGG + chr7_3:85689103-85689122 None:intergenic 10.0%
!! TATTATTATGATATATGTAT+TGG - chr7_3:85689771-85689790 Msa1132850:CDS 10.0%
!! CAAATACAAATTCAAATTAT+TGG + chr7_3:85688697-85688716 None:intergenic 15.0%
!! TAATTTGAATTTGTATTTGA+AGG - chr7_3:85688698-85688717 Msa1132850:three_prime_UTR 15.0%
!! TTTAATTGGAAATAGTTAAA+AGG + chr7_3:85689425-85689444 None:intergenic 15.0%
!! AAGTCTAATAAAGAAAATAA+TGG + chr7_3:85690206-85690225 None:intergenic 15.0%
!! TCATAAATATCTAATACTAT+TGG + chr7_3:85690597-85690616 None:intergenic 15.0%
!! TTGAATTTGACAATATTATA+TGG + chr7_3:85692964-85692983 None:intergenic 15.0%
!!! AACAAAGTAATGTATTTTCA+TGG + chr7_3:85689523-85689542 None:intergenic 20.0%
!!! ACATTACTTTGTTTTTTATG+TGG - chr7_3:85689530-85689549 Msa1132850:intron 20.0%
!!! CATTACTTTGTTTTTTATGT+GGG - chr7_3:85689531-85689550 Msa1132850:intron 20.0%
!!! ATTAAACATACTTTTGTTTG+TGG - chr7_3:85689661-85689680 Msa1132850:intron 20.0%
!!! TTAAACATACTTTTGTTTGT+GGG - chr7_3:85689662-85689681 Msa1132850:intron 20.0%
!! TAGATAAATTCTTCAACATT+TGG + chr7_3:85689823-85689842 None:intergenic 20.0%
!! TTGGATAAAAGAAGTAAAAA+AGG - chr7_3:85690024-85690043 Msa1132850:CDS 20.0%
!! TGGATAAAAGAAGTAAAAAA+GGG - chr7_3:85690025-85690044 Msa1132850:CDS 20.0%
!! TAAATATCTAATACTATTGG+AGG + chr7_3:85690594-85690613 None:intergenic 20.0%
!!! ATAGGATACAAATTTTACTA+TGG - chr7_3:85690788-85690807 Msa1132850:intron 20.0%
!!! GTTTTTTAATGTTAAGTCAA+GGG - chr7_3:85690881-85690900 Msa1132850:intron 20.0%
!!! ATTATTACCTTAGGATTTTT+CGG + chr7_3:85691432-85691451 None:intergenic 20.0%
!! TAATAATACTCTTTGAATTC+AGG - chr7_3:85691445-85691464 Msa1132850:intron 20.0%
!! TTTCATGAAAGAATATGAAA+AGG - chr7_3:85691658-85691677 Msa1132850:intron 20.0%
!!! CTGTATTTTGAATATTTTTC+AGG - chr7_3:85691981-85692000 Msa1132850:CDS 20.0%
!!! ATTTTGACTTGTTTTGTTTT+TGG - chr7_3:85692372-85692391 Msa1132850:CDS 20.0%
!!! ATCTTTTCTTTGATTTTGTT+TGG - chr7_3:85692499-85692518 Msa1132850:CDS 20.0%
!! ATAATAAAAAAAACCCATCA+AGG - chr7_3:85692745-85692764 Msa1132850:CDS 20.0%
!! TTACTTTGTTGATGTTGATT+GGG + chr7_3:85688091-85688110 None:intergenic 25.0%
! TTTACTTTGTTGATGTTGAT+TGG + chr7_3:85688092-85688111 None:intergenic 25.0%
!! GTTTTGCTTAATGTTAAGAT+TGG - chr7_3:85688747-85688766 Msa1132850:CDS 25.0%
! ACTTGCTTAGTTATAGTATA+TGG - chr7_3:85689253-85689272 Msa1132850:CDS 25.0%
!!! TGTAACACTTTTTCAAGTAT+GGG + chr7_3:85689326-85689345 None:intergenic 25.0%
!!! ATGTAACACTTTTTCAAGTA+TGG + chr7_3:85689327-85689346 None:intergenic 25.0%
!! TTGATAGTACATCAATTCAA+TGG + chr7_3:85689463-85689482 None:intergenic 25.0%
!!! AACTGTTTTTTTATGAAAGC+TGG - chr7_3:85689617-85689636 Msa1132850:intron 25.0%
!! AGTCTTGTAAATGAATGTTT+GGG - chr7_3:85689723-85689742 Msa1132850:intron 25.0%
! ATAAATTCTTCAACATTTGG+AGG + chr7_3:85689820-85689839 None:intergenic 25.0%
! CCTATAAACTCCTAATTAAA+GGG + chr7_3:85689984-85690003 None:intergenic 25.0%
! TCCTATAAACTCCTAATTAA+AGG + chr7_3:85689985-85690004 None:intergenic 25.0%
!!! TTTTTCTGGGAGAATATTAA+GGG + chr7_3:85690271-85690290 None:intergenic 25.0%
! TCTTAGAAATTCTTTAATCG+TGG - chr7_3:85690433-85690452 Msa1132850:intron 25.0%
! ATATTATTGGGGTTGTTAAA+GGG + chr7_3:85690485-85690504 None:intergenic 25.0%
! AATATTATTGGGGTTGTTAA+AGG + chr7_3:85690486-85690505 None:intergenic 25.0%
! CAGTCTTGAAAATATTATTG+GGG + chr7_3:85690496-85690515 None:intergenic 25.0%
! GCAGTCTTGAAAATATTATT+GGG + chr7_3:85690497-85690516 None:intergenic 25.0%
! AGCAGTCTTGAAAATATTAT+TGG + chr7_3:85690498-85690517 None:intergenic 25.0%
!! TCAGAGTATTATGCATATAA+CGG + chr7_3:85690548-85690567 None:intergenic 25.0%
!! GAACTTGTCAAATTTTACTA+TGG - chr7_3:85690722-85690741 Msa1132850:intron 25.0%
! TATGGTTTGAGTGTTTAAAT+AGG - chr7_3:85690740-85690759 Msa1132850:intron 25.0%
! TTGAGTGTTTAAATAGGATT+AGG - chr7_3:85690746-85690765 Msa1132850:intron 25.0%
! TATGGTTTGAGTGTTTAAAT+AGG - chr7_3:85690740-85690759 Msa1132850:intron 25.0%
! TTGAGTGTTTAAATAGGATT+AGG - chr7_3:85690746-85690765 Msa1132850:intron 25.0%
! ATAGGAAGAGAAAAATCTAA+GGG - chr7_3:85690859-85690878 Msa1132850:intron 25.0%
!!! GGTTTTTTAATGTTAAGTCA+AGG - chr7_3:85690880-85690899 Msa1132850:intron 25.0%
! AGATTCAAGGAATATTGAAT+TGG + chr7_3:85690907-85690926 None:intergenic 25.0%
! TTGCATAAAAGATTGTGATA+AGG - chr7_3:85690941-85690960 Msa1132850:intron 25.0%
! AAACAATAATGTGGAAATAG+AGG + chr7_3:85691285-85691304 None:intergenic 25.0%
! ATTGAGTCAAAACAATAATG+TGG + chr7_3:85691294-85691313 None:intergenic 25.0%
!! TTATTACCTTAGGATTTTTC+GGG + chr7_3:85691431-85691450 None:intergenic 25.0%
!!! TCAAAGAGTATTATTACCTT+AGG + chr7_3:85691441-85691460 None:intergenic 25.0%
! GAAATATTAAACACATTGCA+GGG + chr7_3:85691777-85691796 None:intergenic 25.0%
!!! ATATTTCCAGTTTCCTTTTT+TGG - chr7_3:85691790-85691809 Msa1132850:intron 25.0%
!!! TTTGAATATTTTTCAGGCTA+AGG - chr7_3:85691987-85692006 Msa1132850:CDS 25.0%
! GCAATAAGATGTGTTTATAA+TGG - chr7_3:85692111-85692130 Msa1132850:CDS 25.0%
! TAAGATGTGTTTATAATGGT+TGG - chr7_3:85692115-85692134 Msa1132850:CDS 25.0%
!!! TCATTTTTGCATAGTAATTG+AGG - chr7_3:85692432-85692451 Msa1132850:CDS 25.0%
! TGGTTATTCAATCTAAATCT+AGG - chr7_3:85692474-85692493 Msa1132850:CDS 25.0%
!! GTTTGTTGAATAAACGAAAA+CGG - chr7_3:85692642-85692661 Msa1132850:CDS 25.0%
! TTTGTTGAATAAACGAAAAC+GGG - chr7_3:85692643-85692662 Msa1132850:CDS 25.0%
TTAACTAGAGAGTTCTACTA+GGG + chr7_3:85687987-85688006 None:intergenic 30.0%
!! AGTGGGTTAGGTTATATTAT+AGG + chr7_3:85688022-85688041 None:intergenic 30.0%
! TACTTTGTTGATGTTGATTG+GGG + chr7_3:85688090-85688109 None:intergenic 30.0%
ATAGGAAGAAGAAGAAGAAA+GGG + chr7_3:85688116-85688135 None:intergenic 30.0%
GATTTCAAGGGTTCATTATT+AGG + chr7_3:85688483-85688502 None:intergenic 30.0%
AATAATGAACCCTTGAAATC+AGG - chr7_3:85688483-85688502 Msa1132850:three_prime_UTR 30.0%
GATGATGCAAGATATTCAAA+AGG - chr7_3:85688668-85688687 Msa1132850:three_prime_UTR 30.0%
CTTAATGTTAAGATTGGAAG+AGG - chr7_3:85688753-85688772 Msa1132850:CDS 30.0%
!! TTATTCGAAAGCTTTGGAAT+TGG - chr7_3:85689007-85689026 Msa1132850:intron 30.0%
! TTAGTCTAGTTTCATTGCTA+AGG - chr7_3:85689201-85689220 Msa1132850:intron 30.0%
!!! GTAACACTTTTTCAAGTATG+GGG + chr7_3:85689325-85689344 None:intergenic 30.0%
!!! GTTAAACACTTTTTCACCTA+GGG + chr7_3:85689369-85689388 None:intergenic 30.0%
!!! AGTTAAACACTTTTTCACCT+AGG + chr7_3:85689370-85689389 None:intergenic 30.0%
! ATTCTCATGGGGTTTTTAAT+TGG + chr7_3:85689439-85689458 None:intergenic 30.0%
AATTCAATGGAATTCTCATG+GGG + chr7_3:85689450-85689469 None:intergenic 30.0%
CAATTCAATGGAATTCTCAT+GGG + chr7_3:85689451-85689470 None:intergenic 30.0%
TCAATTCAATGGAATTCTCA+TGG + chr7_3:85689452-85689471 None:intergenic 30.0%
GTATATGAACCAAATTGAGA+AGG - chr7_3:85689483-85689502 Msa1132850:intron 30.0%
GTATGTTTAATCACACACTT+AGG + chr7_3:85689652-85689671 None:intergenic 30.0%
! GAGTCTTGTAAATGAATGTT+TGG - chr7_3:85689722-85689741 Msa1132850:intron 30.0%
AGGAAATGAAAATGGTAGAA+AGG + chr7_3:85689937-85689956 None:intergenic 30.0%
TAAAAGGGAGGAAATGAAAA+TGG + chr7_3:85689945-85689964 None:intergenic 30.0%
CCCTTTAATTAGGAGTTTAT+AGG - chr7_3:85689981-85690000 Msa1132850:CDS 30.0%
GACTAAAACCCTAAAATATG+CGG - chr7_3:85690112-85690131 Msa1132850:intron 30.0%
ACTAAAACCCTAAAATATGC+GGG - chr7_3:85690113-85690132 Msa1132850:intron 30.0%
! TTAAGTTCCCGCATATTTTA+GGG + chr7_3:85690123-85690142 None:intergenic 30.0%
!! TTTAAGTTCCCGCATATTTT+AGG + chr7_3:85690124-85690143 None:intergenic 30.0%
GGATCGAAATGAAAATCTTA+TGG + chr7_3:85690250-85690269 None:intergenic 30.0%
!! CTTTTTCTGGGAGAATATTA+AGG + chr7_3:85690272-85690291 None:intergenic 30.0%
TAGTATCCAAAACATAACAG+CGG - chr7_3:85690660-85690679 Msa1132850:intron 30.0%
GATAGGAAGAGAAAAATCTA+AGG - chr7_3:85690858-85690877 Msa1132850:intron 30.0%
!! TTGTTGTTCTAGTTCTTTCT+TGG + chr7_3:85691159-85691178 None:intergenic 30.0%
AGAATACTTCGATCCAAATT+TGG - chr7_3:85691178-85691197 Msa1132850:intron 30.0%
TAATACTCTTTGAATTCAGG+TGG - chr7_3:85691448-85691467 Msa1132850:intron 30.0%
ATTCAGATAGCATAACCATA+AGG + chr7_3:85691475-85691494 None:intergenic 30.0%
TACTATAAGCCTGAAAGAAA+TGG + chr7_3:85691517-85691536 None:intergenic 30.0%
GAAAGAATATGAAAAGGCTT+TGG - chr7_3:85691664-85691683 Msa1132850:intron 30.0%
! TTCGAAGGTACATATCATAT+TGG - chr7_3:85691744-85691763 Msa1132850:intron 30.0%
GGAAATATTAAACACATTGC+AGG + chr7_3:85691778-85691797 None:intergenic 30.0%
ACAACTGAAATGGATATACA+TGG + chr7_3:85691833-85691852 None:intergenic 30.0%
AAATTAATAGAACCAGTCGT+GGG - chr7_3:85691860-85691879 Msa1132850:intron 30.0%
ATAAACACATCTTATTGCTG+TGG + chr7_3:85692109-85692128 None:intergenic 30.0%
TCCAGATGAAGTAAATTTGA+TGG - chr7_3:85692250-85692269 Msa1132850:CDS 30.0%
TCCATCAAATTTACTTCATC+TGG + chr7_3:85692254-85692273 None:intergenic 30.0%
GAAGTAAATTTGATGGAAGA+TGG - chr7_3:85692257-85692276 Msa1132850:CDS 30.0%
TTCCTATTGTGACTTTGATT+TGG - chr7_3:85692310-85692329 Msa1132850:CDS 30.0%
TACCAAATCAAAGTCACAAT+AGG + chr7_3:85692315-85692334 None:intergenic 30.0%
!! TTGTGACTTTGATTTGGTAT+TGG - chr7_3:85692316-85692335 Msa1132850:CDS 30.0%
! GATTTGGTATTGGAATAGAT+TGG - chr7_3:85692326-85692345 Msa1132850:CDS 30.0%
AGGTTCATTGCTTAGAAATT+AGG - chr7_3:85692598-85692617 Msa1132850:CDS 30.0%
TTGTTGAATAAACGAAAACG+GGG - chr7_3:85692644-85692663 Msa1132850:CDS 30.0%
ATAAGTTATCATGAGTGAGA+AGG - chr7_3:85692780-85692799 Msa1132850:CDS 30.0%
TTGAACAATTCAGTCAGAAA+AGG - chr7_3:85692916-85692935 Msa1132850:five_prime_UTR 30.0%
GTTAACTAGAGAGTTCTACT+AGG + chr7_3:85687988-85688007 None:intergenic 35.0%
! ACTTTGTTGATGTTGATTGG+GGG + chr7_3:85688089-85688108 None:intergenic 35.0%
TAGGAAGAAGAAGAAGAAAG+GGG + chr7_3:85688115-85688134 None:intergenic 35.0%
GATAGGAAGAAGAAGAAGAA+AGG + chr7_3:85688117-85688136 None:intergenic 35.0%
! TTGAAATCGAAAGGGTTTTG+GGG + chr7_3:85688147-85688166 None:intergenic 35.0%
! GTTGAAATCGAAAGGGTTTT+GGG + chr7_3:85688148-85688167 None:intergenic 35.0%
! AGTTGAAATCGAAAGGGTTT+TGG + chr7_3:85688149-85688168 None:intergenic 35.0%
! TTAAAGCGTCAGTGTAATTC+TGG + chr7_3:85688329-85688348 None:intergenic 35.0%
CTGTTTCAGCTTACAAGAAA+GGG - chr7_3:85688445-85688464 Msa1132850:three_prime_UTR 35.0%
TGAAGATAAACCCTAGTTGT+AGG + chr7_3:85688630-85688649 None:intergenic 35.0%
TGCATCATCTTCACAAAATC+AGG + chr7_3:85688657-85688676 None:intergenic 35.0%
! AGAGAGTTATGCAAGCTTTT+GGG - chr7_3:85688724-85688743 Msa1132850:CDS 35.0%
AATGTTAAGATTGGAAGAGG+TGG - chr7_3:85688756-85688775 Msa1132850:CDS 35.0%
TAATGCTGCGTATAAGAAGA+AGG - chr7_3:85688962-85688981 Msa1132850:intron 35.0%
TCTGCATTATTCGAAAGCTT+TGG - chr7_3:85689001-85689020 Msa1132850:intron 35.0%
TGTATACTTGGAAATGGGAA+AGG - chr7_3:85689067-85689086 Msa1132850:intron 35.0%
ACATGATAGCCTTCTCAATT+TGG + chr7_3:85689495-85689514 None:intergenic 35.0%
TTGAGAAGGCTATCATGTAT+TGG - chr7_3:85689497-85689516 Msa1132850:intron 35.0%
!! TTTGATTTGTTCCTGACACT+TGG - chr7_3:85689562-85689581 Msa1132850:CDS 35.0%
ATTCTTCAACATTTGGAGGA+CGG + chr7_3:85689816-85689835 None:intergenic 35.0%
!! AGTGAAGGCTTTGGATAAAA+GGG + chr7_3:85689960-85689979 None:intergenic 35.0%
!! TAGTGAAGGCTTTGGATAAA+AGG + chr7_3:85689961-85689980 None:intergenic 35.0%
TCCTAATTAAAGGGTAGTGA+AGG + chr7_3:85689975-85689994 None:intergenic 35.0%
AGGAGTTTATAGGAGAATGA+AGG - chr7_3:85689991-85690010 Msa1132850:CDS 35.0%
!!! GAATGAAGGAGAGTGTTTTT+TGG - chr7_3:85690005-85690024 Msa1132850:CDS 35.0%
GAAGAAAAATATGCCATGCA+AGG + chr7_3:85690088-85690107 None:intergenic 35.0%
ATAAACCAAAGTCAACCTTC+AGG + chr7_3:85690397-85690416 None:intergenic 35.0%
GTTAAAGGGTCATTTAACTC+CGG + chr7_3:85690471-85690490 None:intergenic 35.0%
TTTCAAGACTGCTGAGAATT+TGG - chr7_3:85690505-85690524 Msa1132850:intron 35.0%
TTCAAGACTGCTGAGAATTT+GGG - chr7_3:85690506-85690525 Msa1132850:intron 35.0%
!! TGATTTTCCAGCAGAGTATT+TGG - chr7_3:85690565-85690584 Msa1132850:intron 35.0%
! ACAAAACCGCTGTTATGTTT+TGG + chr7_3:85690669-85690688 None:intergenic 35.0%
! AAGCTTGTTTCAGTGTTTGA+TGG - chr7_3:85690694-85690713 Msa1132850:intron 35.0%
ATAGGATTAGGAAGATTTCC+TGG - chr7_3:85690758-85690777 Msa1132850:intron 35.0%
AGATTTCCTGGTGTTTGAAT+AGG - chr7_3:85690770-85690789 Msa1132850:intron 35.0%
TTGTATCCTATTCAAACACC+AGG + chr7_3:85690779-85690798 None:intergenic 35.0%
ATAGGATTAGGAAGATTTCC+TGG - chr7_3:85690758-85690777 Msa1132850:intron 35.0%
AGATTTCCTGGTGTTTGAAT+AGG - chr7_3:85690770-85690789 Msa1132850:intron 35.0%
CCTCATACTGAAAAGATTCA+AGG + chr7_3:85690920-85690939 None:intergenic 35.0%
! CCTTGAATCTTTTCAGTATG+AGG - chr7_3:85690917-85690936 Msa1132850:intron 35.0%
! TTTTGGTAAGTCTCAATGAC+AGG + chr7_3:85691077-85691096 None:intergenic 35.0%
AGCTTCATTGAGTTTCTTCA+GGG + chr7_3:85691129-85691148 None:intergenic 35.0%
TATGAAAACCTTGTCTTGCA+GGG - chr7_3:85691337-85691356 Msa1132850:intron 35.0%
GTGTAATGCTTAATAGCTTC+AGG + chr7_3:85691390-85691409 None:intergenic 35.0%
AAGAAACCCGAAAAATCCTA+AGG - chr7_3:85691422-85691441 Msa1132850:intron 35.0%
CTATCTGAATCCTAACAAGT+TGG - chr7_3:85691485-85691504 Msa1132850:intron 35.0%
! ATGGAGTATTCCAACTTGTT+AGG + chr7_3:85691498-85691517 None:intergenic 35.0%
TGGAATACTCCATTTCTTTC+AGG - chr7_3:85691505-85691524 Msa1132850:intron 35.0%
TTTGCTTCACACAACTGAAA+TGG + chr7_3:85691843-85691862 None:intergenic 35.0%
CAAATTAATAGAACCAGTCG+TGG - chr7_3:85691859-85691878 Msa1132850:intron 35.0%
AATTAATAGAACCAGTCGTG+GGG - chr7_3:85691861-85691880 Msa1132850:intron 35.0%
!!! GACAGGTTTGCTTTTTTTCT+TGG - chr7_3:85692058-85692077 Msa1132850:CDS 35.0%
TGATTTCCAGGAAAATCCAA+AGG - chr7_3:85692158-85692177 Msa1132850:CDS 35.0%
TTACTTCATCTGGACAATTC+CGG + chr7_3:85692244-85692263 None:intergenic 35.0%
! GGTATTGGAATAGATTGGAT+TGG - chr7_3:85692331-85692350 Msa1132850:CDS 35.0%
! TGGATTGGAAGTACAATAGT+TGG - chr7_3:85692346-85692365 Msa1132850:CDS 35.0%
! GGATTGGAAGTACAATAGTT+GGG - chr7_3:85692347-85692366 Msa1132850:CDS 35.0%
!! GTATGTCTTGTGTTTGTTGT+AGG - chr7_3:85692821-85692840 Msa1132850:five_prime_UTR 35.0%
!!! GTTTGTTGTAGGCAGTATTT+TGG - chr7_3:85692832-85692851 Msa1132850:five_prime_UTR 35.0%
TCCTCATTGAACAATTGAGT+CGG - chr7_3:85692866-85692885 Msa1132850:five_prime_UTR 35.0%
!!! AAAAGGAGTTTTGCTGATTC+TGG - chr7_3:85692933-85692952 Msa1132850:five_prime_UTR 35.0%
GATCGGAGTTGAAATCGAAA+GGG + chr7_3:85688155-85688174 None:intergenic 40.0%
! TTCGACGGTTTTCTTTGCAT+CGG + chr7_3:85688352-85688371 None:intergenic 40.0%
! ACTCAAACCTGATTGGTCAA+AGG - chr7_3:85688371-85688390 Msa1132850:three_prime_UTR 40.0%
! CTCAAACCTGATTGGTCAAA+GGG - chr7_3:85688372-85688391 Msa1132850:three_prime_UTR 40.0%
TTGAGAAAGACCAAGATGAG+CGG + chr7_3:85688415-85688434 None:intergenic 40.0%
! GCTGTTTCAGCTTACAAGAA+AGG - chr7_3:85688444-85688463 Msa1132850:three_prime_UTR 40.0%
TCGGCTAAACCTGATTTCAA+GGG + chr7_3:85688495-85688514 None:intergenic 40.0%
ATCGGCTAAACCTGATTTCA+AGG + chr7_3:85688496-85688515 None:intergenic 40.0%
!! AAAAGCATCACCAAACGGAT+TGG + chr7_3:85688571-85688590 None:intergenic 40.0%
!! CCAGAAAAAGCATCACCAAA+CGG + chr7_3:85688576-85688595 None:intergenic 40.0%
TTACTGCTGATCCTACAACT+AGG - chr7_3:85688616-85688635 Msa1132850:three_prime_UTR 40.0%
TACTGCTGATCCTACAACTA+GGG - chr7_3:85688617-85688636 Msa1132850:three_prime_UTR 40.0%
! CAGAGAGTTATGCAAGCTTT+TGG - chr7_3:85688723-85688742 Msa1132850:CDS 40.0%
! GAGAGTTATGCAAGCTTTTG+GGG - chr7_3:85688725-85688744 Msa1132850:CDS 40.0%
!! AGCTTTGGAATTGGATGATG+AGG - chr7_3:85689016-85689035 Msa1132850:intron 40.0%
TTTCCAAGTATACAGCAGCA+CGG + chr7_3:85689061-85689080 None:intergenic 40.0%
TGCTGCTGTATACTTGGAAA+TGG - chr7_3:85689061-85689080 Msa1132850:intron 40.0%
GCTGCTGTATACTTGGAAAT+GGG - chr7_3:85689062-85689081 Msa1132850:intron 40.0%
ACTGTGCTATCTCTATGCAA+AGG - chr7_3:85689280-85689299 Msa1132850:CDS 40.0%
CTGTGCTATCTCTATGCAAA+GGG - chr7_3:85689281-85689300 Msa1132850:CDS 40.0%
ACCTAGGGAAAAAGTTGAAC+AGG + chr7_3:85689354-85689373 None:intergenic 40.0%
ATGAGAGAACTCGGACAATT+TGG + chr7_3:85689854-85689873 None:intergenic 40.0%
! TTGTCCGAGTTCTCTCATTT+TGG - chr7_3:85689856-85689875 Msa1132850:CDS 40.0%
!! TCTCTCATTTTGGAGGGATT+TGG - chr7_3:85689866-85689885 Msa1132850:CDS 40.0%
TTAAAGGGTAGTGAAGGCTT+TGG + chr7_3:85689969-85689988 None:intergenic 40.0%
GCCTTCACTACCCTTTAATT+AGG - chr7_3:85689971-85689990 Msa1132850:CDS 40.0%
AAAATATGCCATGCAAGGTG+AGG + chr7_3:85690083-85690102 None:intergenic 40.0%
CGGGAACTTAAAAATGCACT+GGG - chr7_3:85690132-85690151 Msa1132850:intron 40.0%
!!! GACTTTGAAGGGTGTTTTAG+AGG - chr7_3:85690159-85690178 Msa1132850:intron 40.0%
!!! GGAGCATCTTCACTTTTTCT+GGG + chr7_3:85690284-85690303 None:intergenic 40.0%
!!! AGGAGCATCTTCACTTTTTC+TGG + chr7_3:85690285-85690304 None:intergenic 40.0%
!! GTAGCCTTAAGGCTTTGAAT+GGG + chr7_3:85690368-85690387 None:intergenic 40.0%
ATCGTGGAATCTAATCACAC+CGG - chr7_3:85690449-85690468 Msa1132850:intron 40.0%
GGATACTAAGTGCAATAAGC+AGG + chr7_3:85690648-85690667 None:intergenic 40.0%
TCCTGGTGTTTGAATAGGAT+AGG - chr7_3:85690775-85690794 Msa1132850:intron 40.0%
TCCTATCCTATTCAAACACC+AGG + chr7_3:85690845-85690864 None:intergenic 40.0%
TGTGATAAGGCTGTTGAAAG+AGG - chr7_3:85690954-85690973 Msa1132850:intron 40.0%
! TGATAGCAAGAGCTTTGACA+AGG - chr7_3:85691003-85691022 Msa1132850:intron 40.0%
CAGCTTCATTGAGTTTCTTC+AGG + chr7_3:85691130-85691149 None:intergenic 40.0%
GAAACTCAATGAAGCTGAGA+AGG - chr7_3:85691133-85691152 Msa1132850:intron 40.0%
ATCTCTTAGTCTGATCTTCC+AGG - chr7_3:85691227-85691246 Msa1132850:intron 40.0%
ATAATGTGGAAATAGAGGCC+AGG + chr7_3:85691280-85691299 None:intergenic 40.0%
GTATGAAAACCTTGTCTTGC+AGG - chr7_3:85691336-85691355 Msa1132850:intron 40.0%
TATTCATTCCCTGCAAGACA+AGG + chr7_3:85691348-85691367 None:intergenic 40.0%
TTGAATTCAGGTGGTCCTTA+TGG - chr7_3:85691457-85691476 Msa1132850:intron 40.0%
AGCTGCATGTTACACAAAAC+TGG - chr7_3:85691541-85691560 Msa1132850:intron 40.0%
GCTGCATGTTACACAAAACT+GGG - chr7_3:85691542-85691561 Msa1132850:intron 40.0%
CTGCATGTTACACAAAACTG+GGG - chr7_3:85691543-85691562 Msa1132850:intron 40.0%
TGCATGTTACACAAAACTGG+GGG - chr7_3:85691544-85691563 Msa1132850:intron 40.0%
TCTGCATCCTTTAAACCTTC+AGG + chr7_3:85691575-85691594 None:intergenic 40.0%
!! AAAGGCTTTGGAAACATACC+AGG - chr7_3:85691676-85691695 Msa1132850:intron 40.0%
! CTTTGGAAACATACCAGGAA+GGG - chr7_3:85691681-85691700 Msa1132850:intron 40.0%
GAAACATGATGCAAACAACC+AGG - chr7_3:85691706-85691725 Msa1132850:intron 40.0%
AACAACCAGGAATTGCTTGA+AGG - chr7_3:85691719-85691738 Msa1132850:intron 40.0%
ACAACCAGGAATTGCTTGAA+GGG - chr7_3:85691720-85691739 Msa1132850:intron 40.0%
TTGCAGCCAAAAAAGGAAAC+TGG + chr7_3:85691799-85691818 None:intergenic 40.0%
! ACATGACTTGCAGCCAAAAA+AGG + chr7_3:85691806-85691825 None:intergenic 40.0%
TGTAACTCCTGAAGAGTTGA+AGG - chr7_3:85691885-85691904 Msa1132850:intron 40.0%
! TGAAGGATGTTCTGAATCTC+TGG + chr7_3:85692024-85692043 None:intergenic 40.0%
AGCAAACCTGTCTCATAACA+GGG + chr7_3:85692050-85692069 None:intergenic 40.0%
AAGCAAACCTGTCTCATAAC+AGG + chr7_3:85692051-85692070 None:intergenic 40.0%
!! TAATGGTTGGCTTTGTATGC+AGG - chr7_3:85692128-85692147 Msa1132850:CDS 40.0%
!! TTGGCTTTGTATGCAGGTAT+TGG - chr7_3:85692134-85692153 Msa1132850:CDS 40.0%
AGCTCTTGCGAAAAAGCAAT+TGG - chr7_3:85692281-85692300 Msa1132850:CDS 40.0%
TGCGTTTACAATGCAGTAAC+AGG - chr7_3:85692528-85692547 Msa1132850:CDS 40.0%
! GAACCTTTTCTTGCAAAGAG+AGG + chr7_3:85692584-85692603 None:intergenic 40.0%
TAGGTGCAAGTGTAATGTTG+TGG - chr7_3:85692617-85692636 Msa1132850:CDS 40.0%
ATAAACGAAAACGGGGAAAG+TGG - chr7_3:85692651-85692670 Msa1132850:CDS 40.0%
! TTTAGAGCAACGACCTTGAT+GGG + chr7_3:85692761-85692780 None:intergenic 40.0%
! ATTTAGAGCAACGACCTTGA+TGG + chr7_3:85692762-85692781 None:intergenic 40.0%
! ACCGACTCAATTGTTCAATG+AGG + chr7_3:85692870-85692889 None:intergenic 40.0%
AGAGAGTTCTACTAGGGTCT+GGG + chr7_3:85687981-85688000 None:intergenic 45.0%
TAGAGAGTTCTACTAGGGTC+TGG + chr7_3:85687982-85688001 None:intergenic 45.0%
CTAACCCACTCTCTCTCTAT+CGG - chr7_3:85688032-85688051 Msa1132850:three_prime_UTR 45.0%
!!! GGTTTTGGGGATTTTGCGAT+AGG + chr7_3:85688134-85688153 None:intergenic 45.0%
GGATCGGAGTTGAAATCGAA+AGG + chr7_3:85688156-85688175 None:intergenic 45.0%
TTTCAACTCCGATCCATCCA+TGG - chr7_3:85688161-85688180 Msa1132850:three_prime_UTR 45.0%
TGATGGCATCTGAGAAGTGA+CGG + chr7_3:85688248-85688267 None:intergenic 45.0%
! CCAATCAGGTTTGAGTTCGA+CGG + chr7_3:85688367-85688386 None:intergenic 45.0%
CTGTAACCCTTTGACCAATC+AGG + chr7_3:85688381-85688400 None:intergenic 45.0%
!!! CCGTTTGGTGATGCTTTTTC+TGG - chr7_3:85688573-85688592 Msa1132850:three_prime_UTR 45.0%
!!! TGGTGATGCTTTTTCTGGAC+CGG - chr7_3:85688578-85688597 Msa1132850:three_prime_UTR 45.0%
! TTTTTCTGGACCGGAGATGT+GGG - chr7_3:85688587-85688606 Msa1132850:three_prime_UTR 45.0%
! TAACCGTGCTGCTGTATACT+TGG - chr7_3:85689055-85689074 Msa1132850:intron 45.0%
!! GCCTGTTCAACTTTTTCCCT+AGG - chr7_3:85689350-85689369 Msa1132850:CDS 45.0%
TTGTTCCTGACACTTGGAAG+TGG - chr7_3:85689568-85689587 Msa1132850:CDS 45.0%
TATCACCACTTCCAAGTGTC+AGG + chr7_3:85689576-85689595 None:intergenic 45.0%
AACTCGGACAATTTGGAGGA+GGG + chr7_3:85689847-85689866 None:intergenic 45.0%
AGAGAACTCGGACAATTTGG+AGG + chr7_3:85689851-85689870 None:intergenic 45.0%
! TCCGAGTTCTCTCATTTTGG+AGG - chr7_3:85689859-85689878 Msa1132850:CDS 45.0%
CCCTCCAAAATGAGAGAACT+CGG + chr7_3:85689863-85689882 None:intergenic 45.0%
! CCGAGTTCTCTCATTTTGGA+GGG - chr7_3:85689860-85689879 Msa1132850:CDS 45.0%
! ATTAACTGCCCGTTCGAGTT+AGG - chr7_3:85689903-85689922 Msa1132850:CDS 45.0%
! TTAACTGCCCGTTCGAGTTA+GGG - chr7_3:85689904-85689923 Msa1132850:CDS 45.0%
!! GAAGGCTTTGGATAAAAGGG+AGG + chr7_3:85689957-85689976 None:intergenic 45.0%
GCGGGAACTTAAAAATGCAC+TGG - chr7_3:85690131-85690150 Msa1132850:intron 45.0%
CACTGGGAGAAGACTTTGAA+GGG - chr7_3:85690148-85690167 Msa1132850:intron 45.0%
GTCTCCCATTCAAAGCCTTA+AGG - chr7_3:85690361-85690380 Msa1132850:intron 45.0%
!! GGTAGCCTTAAGGCTTTGAA+TGG + chr7_3:85690369-85690388 None:intergenic 45.0%
TCAAAGCCTTAAGGCTACCT+TGG - chr7_3:85690370-85690389 Msa1132850:intron 45.0%
AAAGTCAACCTTCAGGACCA+AGG + chr7_3:85690390-85690409 None:intergenic 45.0%
! TTGGTCCTGAAGGTTGACTT+TGG - chr7_3:85690389-85690408 Msa1132850:intron 45.0%
! GCAAGAGCTTTGACAAGGAA+AGG - chr7_3:85691008-85691027 Msa1132850:intron 45.0%
ACAAGGAAAGGAACTGCCAT+GGG - chr7_3:85691020-85691039 Msa1132850:intron 45.0%
AGGAACTGCCATGGGTAAAA+CGG - chr7_3:85691028-85691047 Msa1132850:intron 45.0%
!!! GCATTTTGCCGTTTTACCCA+TGG + chr7_3:85691039-85691058 None:intergenic 45.0%
! TGAGTTTCTTCAGGGTGTCT+GGG + chr7_3:85691121-85691140 None:intergenic 45.0%
! TTGAGTTTCTTCAGGGTGTC+TGG + chr7_3:85691122-85691141 None:intergenic 45.0%
CGATCCAAATTTGGCTGATG+AGG - chr7_3:85691187-85691206 Msa1132850:intron 45.0%
CTCTCCTCATCAGCCAAATT+TGG + chr7_3:85691194-85691213 None:intergenic 45.0%
GCTGATGAGGAGAGAGAAAA+AGG - chr7_3:85691200-85691219 Msa1132850:intron 45.0%
GGCAATGCCTGAAGGTTTAA+AGG - chr7_3:85691565-85691584 Msa1132850:intron 45.0%
TATAACCCTTGGTGAAGGTC+GGG + chr7_3:85691616-85691635 None:intergenic 45.0%
GTATAACCCTTGGTGAAGGT+CGG + chr7_3:85691617-85691636 None:intergenic 45.0%
!! GCTTTGGAAACATACCAGGA+AGG - chr7_3:85691680-85691699 Msa1132850:intron 45.0%
CATCATGTTTCAACCCTTCC+TGG + chr7_3:85691697-85691716 None:intergenic 45.0%
CAACCAGGAATTGCTTGAAG+GGG - chr7_3:85691721-85691740 Msa1132850:intron 45.0%
AATTGCTTGAAGGGGTTCGA+AGG - chr7_3:85691729-85691748 Msa1132850:intron 45.0%
TGTCTCTCCTTCAACTCTTC+AGG + chr7_3:85691895-85691914 None:intergenic 45.0%
TGAAGAGTTGAAGGAGAGAC+AGG - chr7_3:85691894-85691913 Msa1132850:intron 45.0%
GTCTCATAACAGGGTCTTGA+AGG + chr7_3:85692041-85692060 None:intergenic 45.0%
TCAAGACCCTGTTATGAGAC+AGG - chr7_3:85692041-85692060 Msa1132850:CDS 45.0%
!! GCAGGTATTGGTTGATTTCC+AGG - chr7_3:85692146-85692165 Msa1132850:CDS 45.0%
ACAGGAACATACCAAGAACC+CGG - chr7_3:85692185-85692204 Msa1132850:CDS 45.0%
ATCCAAAAGCTGATCAGTGC+CGG - chr7_3:85692222-85692241 Msa1132850:CDS 45.0%
GCACCTCTCTTTGCAAGAAA+AGG - chr7_3:85692578-85692597 Msa1132850:CDS 45.0%
! TTCTACTAGGGTCTGGGGTT+GGG + chr7_3:85687975-85687994 None:intergenic 50.0%
GAGAGTTCTACTAGGGTCTG+GGG + chr7_3:85687980-85687999 None:intergenic 50.0%
! CGATAGAGAGAGAGTGGGTT+AGG + chr7_3:85688034-85688053 None:intergenic 50.0%
AGAGCCGATAGAGAGAGAGT+GGG + chr7_3:85688039-85688058 None:intergenic 50.0%
AAGAGCCGATAGAGAGAGAG+TGG + chr7_3:85688040-85688059 None:intergenic 50.0%
!! GCCTTTGGCTTTAGCTTCGT+CGG + chr7_3:85688187-85688206 None:intergenic 50.0%
!! ATCTGAGAAGTGACGGATGG+CGG + chr7_3:85688241-85688260 None:intergenic 50.0%
! GTTGGTGGGGGAAAGATTGA+TGG + chr7_3:85688265-85688284 None:intergenic 50.0%
! AATACAGGACGTGGTTGGTG+GGG + chr7_3:85688278-85688297 None:intergenic 50.0%
GAATACAGGACGTGGTTGGT+GGG + chr7_3:85688279-85688298 None:intergenic 50.0%
GTTGGAATACAGGACGTGGT+TGG + chr7_3:85688283-85688302 None:intergenic 50.0%
ATCGGTTGGAATACAGGACG+TGG + chr7_3:85688287-85688306 None:intergenic 50.0%
CCGTCGAACTCAAACCTGAT+TGG - chr7_3:85688364-85688383 Msa1132850:three_prime_UTR 50.0%
TCAAAGGGTTACAGCCGTCT+CGG - chr7_3:85688387-85688406 Msa1132850:three_prime_UTR 50.0%
! CTTTTTCTGGACCGGAGATG+TGG - chr7_3:85688586-85688605 Msa1132850:three_prime_UTR 50.0%
GTAAGTTTCGCCCACATCTC+CGG + chr7_3:85688600-85688619 None:intergenic 50.0%
! TGGAAGAGGTGGTGATGATG+TGG - chr7_3:85688767-85688786 Msa1132850:CDS 50.0%
AGGAGAAGGAAGTGAAGCAG+AGG - chr7_3:85688907-85688926 Msa1132850:intron 50.0%
GAAGGAAGTGAAGCAGAGGA+AGG - chr7_3:85688911-85688930 Msa1132850:intron 50.0%
ATACAGCAGCACGGTTAGTG+AGG + chr7_3:85689052-85689071 None:intergenic 50.0%
GAACTCGGACAATTTGGAGG+AGG + chr7_3:85689848-85689867 None:intergenic 50.0%
! TAACTGCCCGTTCGAGTTAG+GGG - chr7_3:85689905-85689924 Msa1132850:CDS 50.0%
ATAGTCCCCCTAACTCGAAC+GGG + chr7_3:85689914-85689933 None:intergenic 50.0%
GATAGTCCCCCTAACTCGAA+CGG + chr7_3:85689915-85689934 None:intergenic 50.0%
! ACTAGTCTCCTCACCTTGCA+TGG - chr7_3:85690072-85690091 Msa1132850:intron 50.0%
GCACTGGGAGAAGACTTTGA+AGG - chr7_3:85690147-85690166 Msa1132850:intron 50.0%
AGACTAGAGAGAGAGAGGGA+GGG + chr7_3:85690345-85690364 None:intergenic 50.0%
TGGGAGACTAGAGAGAGAGA+GGG + chr7_3:85690349-85690368 None:intergenic 50.0%
ATGGGAGACTAGAGAGAGAG+AGG + chr7_3:85690350-85690369 None:intergenic 50.0%
! TCAGGACCAAGGTAGCCTTA+AGG + chr7_3:85690379-85690398 None:intergenic 50.0%
TAAGGCTACCTTGGTCCTGA+AGG - chr7_3:85690379-85690398 Msa1132850:intron 50.0%
GAGGATGCCAAATACTCTGC+TGG + chr7_3:85690575-85690594 None:intergenic 50.0%
GACAAGGAAAGGAACTGCCA+TGG - chr7_3:85691019-85691038 Msa1132850:intron 50.0%
! GGTGCTCTGTAAGCGCTTTT+TGG + chr7_3:85691094-85691113 None:intergenic 50.0%
! TCTTCAGGGTGTCTGGGTTA+CGG + chr7_3:85691115-85691134 None:intergenic 50.0%
CTTGCAGGAAATGAAGAGCC+TGG + chr7_3:85691248-85691267 None:intergenic 50.0%
TGGAAATAGAGGCCAGGAGA+AGG + chr7_3:85691274-85691293 None:intergenic 50.0%
CCTTCACCAAGGGTTATACC+CGG - chr7_3:85691618-85691637 Msa1132850:intron 50.0%
ACCAAGGGTTATACCCGGAA+GGG - chr7_3:85691623-85691642 Msa1132850:intron 50.0%
AAAACTGAACCGCACCCTTC+CGG + chr7_3:85691640-85691659 None:intergenic 50.0%
GAACCCCTTCAAGCAATTCC+TGG + chr7_3:85691727-85691746 None:intergenic 50.0%
! GTGCAGCCTTTGGATTTTCC+TGG + chr7_3:85692167-85692186 None:intergenic 50.0%
GGAAAATCCAAAGGCTGCAC+AGG - chr7_3:85692167-85692186 Msa1132850:CDS 50.0%
GTATGTTCCTGTGCAGCCTT+TGG + chr7_3:85692177-85692196 None:intergenic 50.0%
CAGGAACATACCAAGAACCC+GGG - chr7_3:85692186-85692205 Msa1132850:CDS 50.0%
TGGATCTTGTCCATCACACC+CGG + chr7_3:85692207-85692226 None:intergenic 50.0%
!!! TTCCGGCACTGATCAGCTTT+TGG + chr7_3:85692227-85692246 None:intergenic 50.0%
CAGGCAATACGAGTCTCTGT+AGG - chr7_3:85692547-85692566 Msa1132850:CDS 50.0%
!! ATGTCGAGCTGCTTGCTATG+AGG - chr7_3:85692683-85692702 Msa1132850:CDS 50.0%
! TCTACTAGGGTCTGGGGTTG+GGG + chr7_3:85687974-85687993 None:intergenic 55.0%
! GTTCTACTAGGGTCTGGGGT+TGG + chr7_3:85687976-85687995 None:intergenic 55.0%
TTCGTCGGCCATGGATGGAT+CGG + chr7_3:85688172-85688191 None:intergenic 55.0%
TTAGCTTCGTCGGCCATGGA+TGG + chr7_3:85688177-85688196 None:intergenic 55.0%
GCCGACGAAGCTAAAGCCAA+AGG - chr7_3:85688183-85688202 Msa1132850:three_prime_UTR 55.0%
GGAGAATGCAGCGTTGCCTT+TGG + chr7_3:85688202-85688221 None:intergenic 55.0%
! GGCATCTGAGAAGTGACGGA+TGG + chr7_3:85688244-85688263 None:intergenic 55.0%
!! ATACAGGACGTGGTTGGTGG+GGG + chr7_3:85688277-85688296 None:intergenic 55.0%
GGAATACAGGACGTGGTTGG+TGG + chr7_3:85688280-85688299 None:intergenic 55.0%
CAGCGGATCGGTTGGAATAC+AGG + chr7_3:85688293-85688312 None:intergenic 55.0%
AGCCGATGCTCAAAAAGCCG+CGG - chr7_3:85688509-85688528 Msa1132850:three_prime_UTR 55.0%
!! TCACCAAACGGATTGGCACC+CGG + chr7_3:85688564-85688583 None:intergenic 55.0%
GCCTGATATGCCGTCCAGTT+CGG - chr7_3:85688794-85688813 Msa1132850:CDS 55.0%
TCCGAACTGGACGGCATATC+AGG + chr7_3:85688798-85688817 None:intergenic 55.0%
ATATGCCGTCCAGTTCGGAG+AGG - chr7_3:85688799-85688818 Msa1132850:CDS 55.0%
CTCTTCCTCTCCGAACTGGA+CGG + chr7_3:85688807-85688826 None:intergenic 55.0%
AGCTCTCTTCCTCTCCGAAC+TGG + chr7_3:85688811-85688830 None:intergenic 55.0%
GAAGAGAGCTGCTGAACCTG+AGG - chr7_3:85688821-85688840 Msa1132850:intron 55.0%
TGAACCTGAGGTGGCAAAGC+AGG - chr7_3:85688833-85688852 Msa1132850:intron 55.0%
TCATCAGCCACCTCCTCCAT+TGG + chr7_3:85688888-85688907 None:intergenic 55.0%
AATGGAGGAGGTGGCTGATG+AGG - chr7_3:85688887-85688906 Msa1132850:intron 55.0%
AGTGAAGCAGAGGAAGGCTG+AGG - chr7_3:85688917-85688936 Msa1132850:intron 55.0%
AGCAGCACGGTTAGTGAGGA+AGG + chr7_3:85689048-85689067 None:intergenic 55.0%
! AACTGCCCGTTCGAGTTAGG+GGG - chr7_3:85689906-85689925 Msa1132850:CDS 55.0%
GACTAGAGAGAGAGAGGGAG+GGG + chr7_3:85690344-85690363 None:intergenic 55.0%
GAGACTAGAGAGAGAGAGGG+AGG + chr7_3:85690346-85690365 None:intergenic 55.0%
TCCTGCAAGCATCCTTCTCC+TGG - chr7_3:85691259-85691278 Msa1132850:intron 55.0%
AAACTGGGGGCAATGCCTGA+AGG - chr7_3:85691557-85691576 Msa1132850:intron 55.0%
CTTGACCCGACCTTCACCAA+GGG - chr7_3:85691608-85691627 Msa1132850:intron 55.0%
CCGGGTATAACCCTTGGTGA+AGG + chr7_3:85691621-85691640 None:intergenic 55.0%
CACCAAGGGTTATACCCGGA+AGG - chr7_3:85691622-85691641 Msa1132850:intron 55.0%
ACCCTTCCGGGTATAACCCT+TGG + chr7_3:85691627-85691646 None:intergenic 55.0%
AAACTGAACCGCACCCTTCC+GGG + chr7_3:85691639-85691658 None:intergenic 55.0%
AGGAGTTACATCCCCACGAC+TGG + chr7_3:85691875-85691894 None:intergenic 55.0%
TACCAAGAACCCGGGTGTGA+TGG - chr7_3:85692194-85692213 Msa1132850:CDS 55.0%
GGATCTTGTCCATCACACCC+GGG + chr7_3:85692206-85692225 None:intergenic 55.0%
! GGCTTTAGCTTCGTCGGCCA+TGG + chr7_3:85688181-85688200 None:intergenic 60.0%
GGCAACGCTGCATTCTCCTC+CGG - chr7_3:85688204-85688223 Msa1132850:three_prime_UTR 60.0%
! GATGGCGGTTGCGAAATCGC+CGG + chr7_3:85688226-85688245 None:intergenic 60.0%
! GAGAAGCGTGAGCAGCGGAT+CGG + chr7_3:85688305-85688324 None:intergenic 60.0%
! CTGGAGAGAAGCGTGAGCAG+CGG + chr7_3:85688310-85688329 None:intergenic 60.0%
! CAAGATGAGCGGCACCGAGA+CGG + chr7_3:85688404-85688423 None:intergenic 60.0%
!! CGCCGCGGCTTTTTGAGCAT+CGG + chr7_3:85688514-85688533 None:intergenic 60.0%
CGATGCTCAAAAAGCCGCGG+CGG - chr7_3:85688512-85688531 Msa1132850:three_prime_UTR 60.0%
CCTAGAAAAACTCGCCGCCG+CGG + chr7_3:85688529-85688548 None:intergenic 60.0%
TTCTAGGCCACGTTCTGCGC+CGG - chr7_3:85688542-85688561 Msa1132850:three_prime_UTR 60.0%
GAGAGCTGCTGAACCTGAGG+TGG - chr7_3:85688824-85688843 Msa1132850:intron 60.0%
ACCTGAGGTGGCAAAGCAGG+CGG - chr7_3:85688836-85688855 Msa1132850:intron 60.0%
!! TCCTCCATTGGCTCCGGTTC+CGG + chr7_3:85688876-85688895 None:intergenic 60.0%
GGAGGTGGCTGATGAGGAGA+AGG - chr7_3:85688893-85688912 Msa1132850:intron 60.0%
TGAGGCGCAGAAGGAGAAGG+AGG - chr7_3:85688935-85688954 Msa1132850:CDS 60.0%
GGGCGAAGGGGGTAGAGAAT+AGG + chr7_3:85690305-85690324 None:intergenic 60.0%
AGAGAGAGAGAGGGAGGGGA+CGG + chr7_3:85690340-85690359 None:intergenic 60.0%
GCCAGGAGAAGGATGCTTGC+AGG + chr7_3:85691263-85691282 None:intergenic 60.0%
GCTTGACCCGACCTTCACCA+AGG - chr7_3:85691607-85691626 Msa1132850:intron 60.0%
GGGTTATACCCGGAAGGGTG+CGG - chr7_3:85691628-85691647 Msa1132850:intron 60.0%
GTCCATCACACCCGGGTTCT+TGG + chr7_3:85692199-85692218 None:intergenic 60.0%
AGCGTGAGCAGCGGATCGGT+TGG + chr7_3:85688301-85688320 None:intergenic 65.0%
!! CGTCTCGGTGCCGCTCATCT+TGG - chr7_3:85688402-85688421 Msa1132850:three_prime_UTR 65.0%
! CCGCGGCGGCGAGTTTTTCT+AGG - chr7_3:85688526-85688545 Msa1132850:three_prime_UTR 65.0%
TCTAGGCCACGTTCTGCGCC+GGG - chr7_3:85688543-85688562 Msa1132850:three_prime_UTR 65.0%
TCCGCCTGCTTTGCCACCTC+AGG + chr7_3:85688840-85688859 None:intergenic 65.0%
TGAGGTGGCAAAGCAGGCGG+AGG - chr7_3:85688839-85688858 Msa1132850:intron 65.0%
GGTTGAGCCTGAGCCGGAAC+CGG - chr7_3:85688860-85688879 Msa1132850:intron 65.0%
! ATTGGCTCCGGTTCCGGCTC+AGG + chr7_3:85688870-85688889 None:intergenic 65.0%
TGAGCCGGAACCGGAGCCAA+TGG - chr7_3:85688869-85688888 Msa1132850:intron 65.0%
GGAACCGGAGCCAATGGAGG+AGG - chr7_3:85688875-85688894 Msa1132850:intron 65.0%
ACCGGAGCCAATGGAGGAGG+TGG - chr7_3:85688878-85688897 Msa1132850:intron 65.0%
!! GCCACCTCCTCCATTGGCTC+CGG + chr7_3:85688882-85688901 None:intergenic 65.0%
GAGGAAGGCTGAGGCGCAGA+AGG - chr7_3:85688926-85688945 Msa1132850:CDS 65.0%
GGCTGAGGCGCAGAAGGAGA+AGG - chr7_3:85688932-85688951 Msa1132850:CDS 65.0%
GCGCAGAAGGAGAAGGAGGC+TGG - chr7_3:85688939-85688958 Msa1132850:CDS 65.0%
!! GAAGGGCTTTGGGGCGAAGG+GGG + chr7_3:85690316-85690335 None:intergenic 65.0%
!! CGAAGGGCTTTGGGGCGAAG+GGG + chr7_3:85690317-85690336 None:intergenic 65.0%
!! GCGAAGGGCTTTGGGGCGAA+GGG + chr7_3:85690318-85690337 None:intergenic 65.0%
AGGGGACGGCGAAGGGCTTT+GGG + chr7_3:85690326-85690345 None:intergenic 65.0%
GGCGGTTGCGAAATCGCCGG+AGG + chr7_3:85688223-85688242 None:intergenic 70.0%
TTGGCACCCGGCGCAGAACG+TGG + chr7_3:85688552-85688571 None:intergenic 70.0%
GCGCCGGGTGCCAATCCGTT+TGG - chr7_3:85688558-85688577 Msa1132850:three_prime_UTR 70.0%
GGCGGAGGTTGAGCCTGAGC+CGG - chr7_3:85688854-85688873 Msa1132850:intron 70.0%
GCCGGAACCGGAGCCAATGG+AGG - chr7_3:85688872-85688891 Msa1132850:intron 70.0%
!! GGCGAAGGGCTTTGGGGCGA+AGG + chr7_3:85690319-85690338 None:intergenic 70.0%
GGGGACGGCGAAGGGCTTTG+GGG + chr7_3:85690325-85690344 None:intergenic 70.0%
GAGGGGACGGCGAAGGGCTT+TGG + chr7_3:85690327-85690346 None:intergenic 70.0%
GAGAGGGAGGGGACGGCGAA+GGG + chr7_3:85690333-85690352 None:intergenic 70.0%
AGAGAGGGAGGGGACGGCGA+AGG + chr7_3:85690334-85690353 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 85687968 85693015 85687968 ID=Msa1132850;Name=Msa1132850
chr7_3 mRNA 85687968 85693015 85687968 ID=Msa1132850-mRNA-1;Parent=Msa1132850;Name=Msa1132850-mRNA-1;_AED=0.04;_eAED=0.04;_QI=212|1|1|1|1|1|7|752|582
chr7_3 exon 85687968 85688833 85687968 ID=Msa1132850-mRNA-1:exon:25764;Parent=Msa1132850-mRNA-1
chr7_3 exon 85688921 85688980 85688921 ID=Msa1132850-mRNA-1:exon:25763;Parent=Msa1132850-mRNA-1
chr7_3 exon 85689068 85689134 85689068 ID=Msa1132850-mRNA-1:exon:25762;Parent=Msa1132850-mRNA-1
chr7_3 exon 85689233 85689456 85689233 ID=Msa1132850-mRNA-1:exon:25761;Parent=Msa1132850-mRNA-1
chr7_3 exon 85689540 85689625 85689540 ID=Msa1132850-mRNA-1:exon:25760;Parent=Msa1132850-mRNA-1
chr7_3 exon 85689762 85690050 85689762 ID=Msa1132850-mRNA-1:exon:25759;Parent=Msa1132850-mRNA-1
chr7_3 exon 85691895 85693015 85691895 ID=Msa1132850-mRNA-1:exon:25758;Parent=Msa1132850-mRNA-1
chr7_3 five_prime_UTR 85692804 85693015 85692804 ID=Msa1132850-mRNA-1:five_prime_utr;Parent=Msa1132850-mRNA-1
chr7_3 CDS 85691895 85692803 85691895 ID=Msa1132850-mRNA-1:cds;Parent=Msa1132850-mRNA-1
chr7_3 CDS 85689762 85690050 85689762 ID=Msa1132850-mRNA-1:cds;Parent=Msa1132850-mRNA-1
chr7_3 CDS 85689540 85689625 85689540 ID=Msa1132850-mRNA-1:cds;Parent=Msa1132850-mRNA-1
chr7_3 CDS 85689233 85689456 85689233 ID=Msa1132850-mRNA-1:cds;Parent=Msa1132850-mRNA-1
chr7_3 CDS 85689068 85689134 85689068 ID=Msa1132850-mRNA-1:cds;Parent=Msa1132850-mRNA-1
chr7_3 CDS 85688921 85688980 85688921 ID=Msa1132850-mRNA-1:cds;Parent=Msa1132850-mRNA-1
chr7_3 CDS 85688720 85688833 85688720 ID=Msa1132850-mRNA-1:cds;Parent=Msa1132850-mRNA-1
chr7_3 three_prime_UTR 85687968 85688719 85687968 ID=Msa1132850-mRNA-1:three_prime_utr;Parent=Msa1132850-mRNA-1
Gene Sequence

>Msa1132850

ATGGCCGACGAAGCTAAAGCCAAAGGCAACGCTGCATTCTCCTCCGGCGATTTCGCAACCGCCATCCGTCACTTCTCAGATGCCATCAATCTTTCCCCCACCAACCACGTCCTGTATTCCAACCGATCCGCTGCTCACGCTTCTCTCCAGAATTACACTGACGCTTTAACCGATGCAAAGAAAACCGTCGAACTCAAACCTGATTGGTCAAAGGGTTACAGCCGTCTCGGTGCCGCTCATCTTGGTCTTTCTCAATACGACGAAGCTGTTTCAGCTTACAAGAAAGGGTTAGAAATTGATCCTAATAATGAACCCTTGAAATCAGGTTTAGCCGATGCTCAAAAAGCCGCGGCGGCGAGTTTTTCTAGGCCACGTTCTGCGCCGGGTGCCAATCCGTTTGGTGATGCTTTTTCTGGACCGGAGATGTGGGCGAAACTTACTGCTGATCCTACAACTAGGGTTTATCTTCAACAGCCTGATTTTGTGAAGATGATGCAAGATATTCAAAAGGATCCCAATAATTTGAATTTGTATTTGAAGGATCAGAGAGTTATGCAAGCTTTTGGGGTTTTGCTTAATGTTAAGATTGGAAGAGGTGGTGATGATGTGGATATGCCTGATATGCCGTCCAGTTCGGAGAGGAAGAGAGCTGCTGAACCTGAGGTGGCAAAGCAGGCGGAGGTTGAGCCTGAGCCGGAACCGGAGCCAATGGAGGAGGTGGCTGATGAGGAGAAGGAAGTGAAGCAGAGGAAGGCTGAGGCGCAGAAGGAGAAGGAGGCTGGTAATGCTGCGTATAAGAAGAAGGATTTTGATACTGCGATTCTGCATTATTCGAAAGCTTTGGAATTGGATGATGAGGATGTTTCCTTCCTCACTAACCGTGCTGCTGTATACTTGGAAATGGGAAAGTATGAGGATTGCATAAAAGATTGTGATAAGGCTGTTGAAAGAGGACGAGAGCTAAGAGCAGACTACAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCCATGGGTAAAACGGCAAAATGCTCTAAAGATTATGAACCTGTCATTGAGACTTACCAAAAAGCGCTTACAGAGCACCGTAACCCAGACACCCTGAAGAAACTCAATGAAGCTGAGAAGGCCAAGAAAGAACTAGAACAACAAGAATACTTCGATCCAAATTTGGCTGATGAGGAGAGAGAAAAAGGGAATGAATACTTTAAGCAGCAGAAGTATCCTGAAGCTATTAAGCATTACACAGAGTCTATAAAAAGAAACCCGAAAAATCCTAAGGCTTATAGTAACAGAGCTGCATGTTACACAAAACTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGTATTGAGCTTGACCCGACCTTCACCAAGGGTTATACCCGGAAGGGTGCGGTTCAGTTTTTCATGAAAGAATATGAAAAGGCTTTGGAAACATACCAGGAAGGGTTGAAACATGATGCAAACAACCAGGAATTGCTTGAAGGGGTTCGAAGTTGTGTGAAGCAAATTAATAGAACCAGTCGTGGGGATGTAACTCCTGAAGAGTTGAAGGAGAGACAGGCTAAGGCAATGCAAGATCCAGAGATTCAGAACATCCTTCAAGACCCTGTTATGAGACAGGTATTGGTTGATTTCCAGGAAAATCCAAAGGCTGCACAGGAACATACCAAGAACCCGGGTGTGATGGACAAGATCCAAAAGCTGATCAGTGCCGGAATTGTCCAGATGAAGTAA
Protein sequence

>Msa1132850

MADEAKAKGNAAFSSGDFATAIRHFSDAINLSPTNHVLYSNRSAAHASLQNYTDALTDAKKTVELKPDWSKGYSRLGAAHLGLSQYDEAVSAYKKGLEIDPNNEPLKSGLADAQKAAAASFSRPRSAPGANPFGDAFSGPEMWAKLTADPTTRVYLQQPDFVKMMQDIQKDPNNLNLYLKDQRVMQAFGVLLNVKIGRGGDDVDMPDMPSSSERKRAAEPEVAKQAEVEPEPEPEPMEEVADEEKEVKQRKAEAQKEKEAGNAAYKKKDFDTAILHYSKALELDDEDVSFLTNRAAVYLEMGKYEDCIKDCDKAVERGRELRADYKMIARALTRKGTAMGKTAKCSKDYEPVIETYQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPNLADEEREKGNEYFKQQKYPEAIKHYTESIKRNPKNPKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKALETYQEGLKHDANNQELLEGVRSCVKQINRTSRGDVTPEELKERQAKAMQDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPGVMDKIQKLISAGIVQMK*