Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601380 | XP_003606114.1 | 90.832 | 589 | 46 | 1 | 1 | 581 | 1 | 589 | 0.0 | 1018 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601380 | sp|F4HW17|TMN5_ARATH | 51.370 | 584 | 269 | 6 | 8 | 581 | 11 | 589 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0601380 | -0.805830 | 1.104754e-49 | -8.615850e-47 |
| Msa0006480 | Msa0601380 | 0.809463 | 1.868879e-50 | -8.615850e-47 |
| Msa0007810 | Msa0601380 | -0.817904 | 2.588865e-52 | -8.615850e-47 |
| Msa0011060 | Msa0601380 | -0.824264 | 8.869043e-54 | -8.615850e-47 |
| Msa0011100 | Msa0601380 | -0.811220 | 7.805781e-51 | -8.615850e-47 |
| Msa0011440 | Msa0601380 | -0.809583 | 1.761525e-50 | -8.615850e-47 |
| Msa0013270 | Msa0601380 | 0.822453 | 2.350340e-53 | -8.615850e-47 |
| Msa0016380 | Msa0601380 | -0.805515 | 1.286373e-49 | -8.615850e-47 |
| Msa0017300 | Msa0601380 | -0.812390 | 4.343048e-51 | -8.615850e-47 |
| Msa0017710 | Msa0601380 | 0.822309 | 2.537896e-53 | -8.615850e-47 |
| Msa0025570 | Msa0601380 | 0.810507 | 1.113882e-50 | -8.615850e-47 |
| Msa0037180 | Msa0601380 | 0.803798 | 2.935198e-49 | -8.615850e-47 |
| Msa0039750 | Msa0601380 | 0.828317 | 9.614511e-55 | -8.615850e-47 |
| Msa0040860 | Msa0601380 | -0.809634 | 1.717098e-50 | -8.615850e-47 |
| Msa0044530 | Msa0601380 | -0.840978 | 6.275922e-58 | -8.615850e-47 |
| Msa0045810 | Msa0601380 | 0.833464 | 5.254980e-56 | -8.615850e-47 |
| Msa0046200 | Msa0601380 | 0.810216 | 1.287071e-50 | -8.615850e-47 |
| Msa0048410 | Msa0601380 | -0.810821 | 9.525325e-51 | -8.615850e-47 |
| Msa0054790 | Msa0601380 | 0.800922 | 1.148064e-48 | -8.615850e-47 |
| Msa0056230 | Msa0601380 | -0.817747 | 2.809636e-52 | -8.615850e-47 |
| Msa0060410 | Msa0601380 | 0.811610 | 6.424356e-51 | -8.615850e-47 |
| Msa0062190 | Msa0601380 | 0.804955 | 1.684937e-49 | -8.615850e-47 |
| Msa0065670 | Msa0601380 | -0.809860 | 1.535751e-50 | -8.615850e-47 |
| Msa0073110 | Msa0601380 | 0.812033 | 5.197603e-51 | -8.615850e-47 |
| Msa0089470 | Msa0601380 | -0.805928 | 1.053457e-49 | -8.615850e-47 |
| Msa0091220 | Msa0601380 | -0.838431 | 2.888423e-57 | -8.615850e-47 |
| Msa0091240 | Msa0601380 | -0.839800 | 1.276054e-57 | -8.615850e-47 |
| Msa0092220 | Msa0601380 | 0.810233 | 1.276499e-50 | -8.615850e-47 |
| Msa0094560 | Msa0601380 | 0.800055 | 1.724750e-48 | -8.615850e-47 |
| Msa0095810 | Msa0601380 | -0.800949 | 1.133579e-48 | -8.615850e-47 |
| Msa0100540 | Msa0601380 | 0.813064 | 3.092555e-51 | -8.615850e-47 |
| Msa0106540 | Msa0601380 | 0.822348 | 2.485445e-53 | -8.615850e-47 |
| Msa0121320 | Msa0601380 | 0.810637 | 1.044225e-50 | -8.615850e-47 |
| Msa0127910 | Msa0601380 | -0.801623 | 8.251331e-49 | -8.615850e-47 |
| Msa0132080 | Msa0601380 | -0.806183 | 9.307275e-50 | -8.615850e-47 |
| Msa0136180 | Msa0601380 | -0.822986 | 1.766185e-53 | -8.615850e-47 |
| Msa0139500 | Msa0601380 | 0.808408 | 3.142431e-50 | -8.615850e-47 |
| Msa0143590 | Msa0601380 | 0.812660 | 3.792061e-51 | -8.615850e-47 |
| Msa0166180 | Msa0601380 | 0.805516 | 1.285376e-49 | -8.615850e-47 |
| Msa0173250 | Msa0601380 | 0.826083 | 3.295679e-54 | -8.615850e-47 |
| Msa0178440 | Msa0601380 | -0.807818 | 4.197115e-50 | -8.615850e-47 |
| Msa0180210 | Msa0601380 | 0.821320 | 4.298224e-53 | -8.615850e-47 |
| Msa0183310 | Msa0601380 | -0.837082 | 6.412154e-57 | -8.615850e-47 |
| Msa0195230 | Msa0601380 | 0.807146 | 5.828042e-50 | -8.615850e-47 |
| Msa0195260 | Msa0601380 | 0.805315 | 1.416392e-49 | -8.615850e-47 |
| Msa0211460 | Msa0601380 | 0.811118 | 8.214724e-51 | -8.615850e-47 |
| Msa0216150 | Msa0601380 | -0.823481 | 1.353538e-53 | -8.615850e-47 |
| Msa0224110 | Msa0601380 | 0.806192 | 9.267575e-50 | -8.615850e-47 |
| Msa0225070 | Msa0601380 | -0.822346 | 2.488204e-53 | -8.615850e-47 |
| Msa0229350 | Msa0601380 | -0.802955 | 4.387759e-49 | -8.615850e-47 |
| Msa0234150 | Msa0601380 | 0.821638 | 3.629638e-53 | -8.615850e-47 |
| Msa0234170 | Msa0601380 | 0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0238110 | Msa0601380 | 0.802804 | 4.715954e-49 | -8.615850e-47 |
| Msa0364910 | Msa0601380 | -0.826527 | 2.583791e-54 | -8.615850e-47 |
| Msa0371350 | Msa0601380 | -0.820066 | 8.345724e-53 | -8.615850e-47 |
| Msa0375930 | Msa0601380 | -0.811697 | 6.149387e-51 | -8.615850e-47 |
| Msa0379480 | Msa0601380 | 0.802802 | 4.719011e-49 | -8.615850e-47 |
| Msa0380110 | Msa0601380 | 0.803021 | 4.253187e-49 | -8.615850e-47 |
| Msa0385030 | Msa0601380 | 0.811709 | 6.112394e-51 | -8.615850e-47 |
| Msa0386880 | Msa0601380 | 0.823166 | 1.603346e-53 | -8.615850e-47 |
| Msa0387740 | Msa0601380 | -0.803308 | 3.708835e-49 | -8.615850e-47 |
| Msa0388210 | Msa0601380 | 0.818529 | 1.869581e-52 | -8.615850e-47 |
| Msa0390590 | Msa0601380 | -0.801788 | 7.632556e-49 | -8.615850e-47 |
| Msa0403740 | Msa0601380 | -0.818918 | 1.525378e-52 | -8.615850e-47 |
| Msa0412580 | Msa0601380 | -0.831979 | 1.227940e-55 | -8.615850e-47 |
| Msa0419420 | Msa0601380 | -0.810849 | 9.394555e-51 | -8.615850e-47 |
| Msa0424570 | Msa0601380 | -0.812421 | 4.275486e-51 | -8.615850e-47 |
| Msa0429450 | Msa0601380 | 0.802279 | 6.048858e-49 | -8.615850e-47 |
| Msa0429600 | Msa0601380 | 0.809096 | 2.239751e-50 | -8.615850e-47 |
| Msa0430130 | Msa0601380 | 0.819211 | 1.308112e-52 | -8.615850e-47 |
| Msa0435280 | Msa0601380 | 0.805365 | 1.382949e-49 | -8.615850e-47 |
| Msa0436100 | Msa0601380 | 0.816900 | 4.356417e-52 | -8.615850e-47 |
| Msa0437440 | Msa0601380 | -0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0438680 | Msa0601380 | -0.804699 | 1.906078e-49 | -8.615850e-47 |
| Msa0452770 | Msa0601380 | 0.801894 | 7.260145e-49 | -8.615850e-47 |
| Msa0456450 | Msa0601380 | -0.823723 | 1.188217e-53 | -8.615850e-47 |
| Msa0457070 | Msa0601380 | -0.842884 | 1.968789e-58 | -8.615850e-47 |
| Msa0240590 | Msa0601380 | -0.806900 | 6.571486e-50 | -8.615850e-47 |
| Msa0251920 | Msa0601380 | 0.815839 | 7.527487e-52 | -8.615850e-47 |
| Msa0267450 | Msa0601380 | -0.836821 | 7.474453e-57 | -8.615850e-47 |
| Msa0267510 | Msa0601380 | -0.834708 | 2.564262e-56 | -8.615850e-47 |
| Msa0269220 | Msa0601380 | -0.803240 | 3.831058e-49 | -8.615850e-47 |
| Msa0276860 | Msa0601380 | 0.806120 | 9.595770e-50 | -8.615850e-47 |
| Msa0279000 | Msa0601380 | 0.819999 | 8.647390e-53 | -8.615850e-47 |
| Msa0279810 | Msa0601380 | 0.809458 | 1.873298e-50 | -8.615850e-47 |
| Msa0287480 | Msa0601380 | 0.813316 | 2.721979e-51 | -8.615850e-47 |
| Msa0290800 | Msa0601380 | 0.833385 | 5.498367e-56 | -8.615850e-47 |
| Msa0294200 | Msa0601380 | 0.802623 | 5.138747e-49 | -8.615850e-47 |
| Msa0304350 | Msa0601380 | -0.802621 | 5.144152e-49 | -8.615850e-47 |
| Msa0307430 | Msa0601380 | 0.834983 | 2.185338e-56 | -8.615850e-47 |
| Msa0307630 | Msa0601380 | 0.814276 | 1.672665e-51 | -8.615850e-47 |
| Msa0316000 | Msa0601380 | 0.823744 | 1.174525e-53 | -8.615850e-47 |
| Msa0319220 | Msa0601380 | 0.806871 | 6.665727e-50 | -8.615850e-47 |
| Msa0326170 | Msa0601380 | -0.816845 | 4.482981e-52 | -8.615850e-47 |
| Msa0328870 | Msa0601380 | 0.834221 | 3.396643e-56 | -8.615850e-47 |
| Msa0331070 | Msa0601380 | -0.843031 | 1.798578e-58 | -8.615850e-47 |
| Msa0364030 | Msa0601380 | -0.818196 | 2.223258e-52 | -8.615850e-47 |
| Msa0484210 | Msa0601380 | -0.815917 | 7.232185e-52 | -8.615850e-47 |
| Msa0501080 | Msa0601380 | 0.816053 | 6.743505e-52 | -8.615850e-47 |
| Msa0506750 | Msa0601380 | 0.860288 | 2.292338e-63 | -8.615850e-47 |
| Msa0516000 | Msa0601380 | -0.815468 | 9.101299e-52 | -8.615850e-47 |
| Msa0526150 | Msa0601380 | 0.807080 | 6.019859e-50 | -8.615850e-47 |
| Msa0538050 | Msa0601380 | -0.804913 | 1.719559e-49 | -8.615850e-47 |
| Msa0565700 | Msa0601380 | 0.809448 | 1.882619e-50 | -8.615850e-47 |
| Msa0567330 | Msa0601380 | 0.828208 | 1.021752e-54 | -8.615850e-47 |
| Msa0567570 | Msa0601380 | 0.809671 | 1.686343e-50 | -8.615850e-47 |
| Msa0568460 | Msa0601380 | -0.800683 | 1.284412e-48 | -8.615850e-47 |
| Msa0576320 | Msa0601380 | 0.831147 | 1.968120e-55 | -8.615850e-47 |
| Msa0601380 | Msa0606820 | 0.804032 | 2.624389e-49 | -8.615850e-47 |
| Msa0601380 | Msa0608820 | 0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0601380 | Msa0610700 | -0.801343 | 9.415038e-49 | -8.615850e-47 |
| Msa0601380 | Msa0615070 | 0.800211 | 1.602852e-48 | -8.615850e-47 |
| Msa0601380 | Msa0616890 | -0.809913 | 1.496021e-50 | -8.615850e-47 |
| Msa0601380 | Msa0618700 | 0.808961 | 2.394805e-50 | -8.615850e-47 |
| Msa0601380 | Msa0619300 | 0.806663 | 7.372960e-50 | -8.615850e-47 |
| Msa0601380 | Msa0630440 | 0.827195 | 1.788972e-54 | -8.615850e-47 |
| Msa0601380 | Msa0646230 | 0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa0601380 | Msa0659020 | -0.830873 | 2.298497e-55 | -8.615850e-47 |
| Msa0601380 | Msa0661480 | 0.843662 | 1.220508e-58 | -8.615850e-47 |
| Msa0601380 | Msa0676570 | -0.818731 | 1.681669e-52 | -8.615850e-47 |
| Msa0601380 | Msa0680370 | 0.869943 | 2.118577e-66 | -8.615850e-47 |
| Msa0601380 | Msa0680450 | 0.861268 | 1.155733e-63 | -8.615850e-47 |
| Msa0601380 | Msa0685390 | -0.811437 | 7.005734e-51 | -8.615850e-47 |
| Msa0601380 | Msa0686830 | 0.803565 | 3.281592e-49 | -8.615850e-47 |
| Msa0601380 | Msa0689830 | 0.800237 | 1.583399e-48 | -8.615850e-47 |
| Msa0601380 | Msa0701800 | -0.813658 | 2.289338e-51 | -8.615850e-47 |
| Msa0601380 | Msa0703430 | -0.800241 | 1.580417e-48 | -8.615850e-47 |
| Msa0601380 | Msa0704690 | 0.832497 | 9.138569e-56 | -8.615850e-47 |
| Msa0601380 | Msa0707360 | 0.833769 | 4.408012e-56 | -8.615850e-47 |
| Msa0601380 | Msa0719750 | 0.803838 | 2.879900e-49 | -8.615850e-47 |
| Msa0601380 | Msa0726170 | -0.810223 | 1.282901e-50 | -8.615850e-47 |
| Msa0601380 | Msa0727510 | 0.816914 | 4.325332e-52 | -8.615850e-47 |
| Msa0601380 | Msa0732970 | 0.830763 | 2.445148e-55 | -8.615850e-47 |
| Msa0601380 | Msa0733240 | -0.808957 | 2.399383e-50 | -8.615850e-47 |
| Msa0601380 | Msa0738680 | 0.806179 | 9.328842e-50 | -8.615850e-47 |
| Msa0601380 | Msa0742370 | -0.811958 | 5.395510e-51 | -8.615850e-47 |
| Msa0601380 | Msa0745140 | 0.801808 | 7.561226e-49 | -8.615850e-47 |
| Msa0601380 | Msa0746650 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa0601380 | Msa0750490 | -0.812418 | 4.281498e-51 | -8.615850e-47 |
| Msa0601380 | Msa0761830 | 0.811336 | 7.368700e-51 | -8.615850e-47 |
| Msa0601380 | Msa0773960 | 0.828209 | 1.021038e-54 | -8.615850e-47 |
| Msa0601380 | Msa0775660 | 0.810658 | 1.033287e-50 | -8.615850e-47 |
| Msa0601380 | Msa0776640 | 0.801006 | 1.103448e-48 | -8.615850e-47 |
| Msa0601380 | Msa0779450 | -0.802945 | 4.408326e-49 | -8.615850e-47 |
| Msa0601380 | Msa0786600 | -0.809868 | 1.529623e-50 | -8.615850e-47 |
| Msa0601380 | Msa0792410 | 0.812505 | 4.098629e-51 | -8.615850e-47 |
| Msa0601380 | Msa0802760 | 0.818991 | 1.467876e-52 | -8.615850e-47 |
| Msa0601380 | Msa0804170 | 0.819637 | 1.045899e-52 | -8.615850e-47 |
| Msa0601380 | Msa0807870 | -0.806517 | 7.915485e-50 | -8.615850e-47 |
| Msa0601380 | Msa0812020 | -0.822633 | 2.133799e-53 | -8.615850e-47 |
| Msa0601380 | Msa0819150 | 0.811139 | 8.128326e-51 | -8.615850e-47 |
| Msa0601380 | Msa0822680 | -0.800583 | 1.346623e-48 | -8.615850e-47 |
| Msa0601380 | Msa0825920 | 0.800626 | 1.319592e-48 | -8.615850e-47 |
| Msa0601380 | Msa0829770 | -0.801097 | 1.057489e-48 | -8.615850e-47 |
| Msa0601380 | Msa0838620 | -0.820540 | 6.499174e-53 | -8.615850e-47 |
| Msa0601380 | Msa0841050 | 0.839065 | 1.980426e-57 | -8.615850e-47 |
| Msa0601380 | Msa0842180 | 0.803551 | 3.303058e-49 | -8.615850e-47 |
| Msa0601380 | Msa0852090 | -0.807317 | 5.362360e-50 | -8.615850e-47 |
| Msa0601380 | Msa0852890 | 0.805152 | 1.532007e-49 | -8.615850e-47 |
| Msa0601380 | Msa0853590 | 0.812080 | 5.075407e-51 | -8.615850e-47 |
| Msa0601380 | Msa0862480 | -0.811322 | 7.418858e-51 | -8.615850e-47 |
| Msa0601380 | Msa0868050 | -0.819927 | 8.982575e-53 | -8.615850e-47 |
| Msa0601380 | Msa0869320 | -0.801366 | 9.314932e-49 | -8.615850e-47 |
| Msa0601380 | Msa0880910 | 0.816872 | 4.421386e-52 | -8.615850e-47 |
| Msa0601380 | Msa0903340 | 0.803033 | 4.228797e-49 | -8.615850e-47 |
| Msa0601380 | Msa0903460 | -0.800740 | 1.250930e-48 | -8.615850e-47 |
| Msa0601380 | Msa0906100 | -0.817139 | 3.849414e-52 | -8.615850e-47 |
| Msa0601380 | Msa0921390 | 0.814579 | 1.434035e-51 | -8.615850e-47 |
| Msa0601380 | Msa0930770 | 0.828825 | 7.249510e-55 | -8.615850e-47 |
| Msa0601380 | Msa0934290 | -0.811833 | 5.743638e-51 | -8.615850e-47 |
| Msa0601380 | Msa0936630 | 0.804234 | 2.382458e-49 | -8.615850e-47 |
| Msa0601380 | Msa0938150 | -0.803435 | 3.490592e-49 | -8.615850e-47 |
| Msa0601380 | Msa0967780 | 0.822041 | 2.928363e-53 | -8.615850e-47 |
| Msa0601380 | Msa0967900 | -0.808137 | 3.590000e-50 | -8.615850e-47 |
| Msa0601380 | Msa0971780 | -0.815691 | 8.119672e-52 | -8.615850e-47 |
| Msa0601380 | Msa0981670 | 0.801031 | 1.090744e-48 | -8.615850e-47 |
| Msa0601380 | Msa0982730 | 0.809671 | 1.686343e-50 | -8.615850e-47 |
| Msa0601380 | Msa0998660 | -0.800843 | 1.191406e-48 | -8.615850e-47 |
| Msa0601380 | Msa1002820 | 0.802596 | 5.204080e-49 | -8.615850e-47 |
| Msa0601380 | Msa1013190 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
| Msa0601380 | Msa1014550 | -0.835649 | 1.484346e-56 | -8.615850e-47 |
| Msa0601380 | Msa1015360 | 0.818900 | 1.539552e-52 | -8.615850e-47 |
| Msa0601380 | Msa1022420 | 0.822785 | 1.966680e-53 | -8.615850e-47 |
| Msa0601380 | Msa1025440 | -0.804668 | 1.934366e-49 | -8.615850e-47 |
| Msa0601380 | Msa1029840 | 0.800995 | 1.109265e-48 | -8.615850e-47 |
| Msa0601380 | Msa1039150 | -0.807008 | 6.233060e-50 | -8.615850e-47 |
| Msa0601380 | Msa1041060 | 0.811191 | 7.920712e-51 | -8.615850e-47 |
| Msa0601380 | Msa1055520 | -0.831771 | 1.381515e-55 | -8.615850e-47 |
| Msa0601380 | Msa1056890 | 0.814713 | 1.338817e-51 | -8.615850e-47 |
| Msa0601380 | Msa1070630 | -0.824717 | 6.936966e-54 | -8.615850e-47 |
| Msa0601380 | Msa1078210 | -0.800297 | 1.539903e-48 | -8.615850e-47 |
| Msa0601380 | Msa1078590 | -0.822905 | 1.844259e-53 | -8.615850e-47 |
| Msa0601380 | Msa1078760 | -0.816410 | 5.609729e-52 | -8.615850e-47 |
| Msa0601380 | Msa1093190 | -0.831246 | 1.860595e-55 | -8.615850e-47 |
| Msa0601380 | Msa1104020 | -0.819905 | 9.083820e-53 | -8.615850e-47 |
| Msa0601380 | Msa1106730 | -0.819665 | 1.031013e-52 | -8.615850e-47 |
| Msa0601380 | Msa1107330 | 0.801744 | 7.793520e-49 | -8.615850e-47 |
| Msa0601380 | Msa1115600 | 0.811833 | 5.745492e-51 | -8.615850e-47 |
| Msa0601380 | Msa1129120 | -0.803409 | 3.534785e-49 | -8.615850e-47 |
| Msa0601380 | Msa1143490 | 0.815559 | 8.687160e-52 | -8.615850e-47 |
| Msa0601380 | Msa1146980 | 0.807423 | 5.092425e-50 | -8.615850e-47 |
| Msa0601380 | Msa1147010 | 0.807239 | 5.570695e-50 | -8.615850e-47 |
| Msa0601380 | Msa1156730 | 0.808802 | 2.589456e-50 | -8.615850e-47 |
| Msa0601380 | Msa1156740 | 0.807581 | 4.712647e-50 | -8.615850e-47 |
| Msa0601380 | Msa1158450 | -0.810343 | 1.208272e-50 | -8.615850e-47 |
| Msa0601380 | Msa1165460 | 0.846612 | 1.946376e-59 | -8.615850e-47 |
| Msa0601380 | Msa1169590 | -0.810682 | 1.020787e-50 | -8.615850e-47 |
| Msa0601380 | Msa1184680 | 0.846824 | 1.704202e-59 | -8.615850e-47 |
| Msa0601380 | Msa1191530 | -0.815310 | 9.868619e-52 | -8.615850e-47 |
| Msa0601380 | Msa1197720 | 0.808242 | 3.410541e-50 | -8.615850e-47 |
| Msa0601380 | Msa1199540 | -0.805129 | 1.549212e-49 | -8.615850e-47 |
| Msa0601380 | Msa1205270 | -0.822437 | 2.370421e-53 | -8.615850e-47 |
| Msa0601380 | Msa1209990 | -0.805672 | 1.192292e-49 | -8.615850e-47 |
| Msa0601380 | Msa1213470 | -0.817445 | 3.284795e-52 | -8.615850e-47 |
| Msa0601380 | Msa1217890 | 0.815723 | 7.989652e-52 | -8.615850e-47 |
| Msa0601380 | Msa1220580 | 0.816865 | 4.436543e-52 | -8.615850e-47 |
| Msa0601380 | Msa1230560 | 0.813350 | 2.675676e-51 | -8.615850e-47 |
| Msa0601380 | Msa1254910 | 0.803617 | 3.200967e-49 | -8.615850e-47 |
| Msa0601380 | Msa1263110 | 0.805186 | 1.507401e-49 | -8.615850e-47 |
| Msa0601380 | Msa1266120 | -0.837153 | 6.146826e-57 | -8.615850e-47 |
| Msa0601380 | Msa1273320 | 0.800143 | 1.654817e-48 | -8.615850e-47 |
| Msa0601380 | Msa1279200 | -0.801786 | 7.638463e-49 | -8.615850e-47 |
| Msa0601380 | Msa1286860 | -0.824684 | 7.062598e-54 | -8.615850e-47 |
| Msa0601380 | Msa1295210 | -0.822380 | 2.443035e-53 | -8.615850e-47 |
| Msa0601380 | Msa1298480 | -0.807255 | 5.526239e-50 | -8.615850e-47 |
| Msa0601380 | Msa1300370 | -0.817192 | 3.745246e-52 | -8.615850e-47 |
| Msa0601380 | Msa1320660 | -0.804192 | 2.430404e-49 | -8.615850e-47 |
| Msa0601380 | Msa1332340 | -0.815436 | 9.255649e-52 | -8.615850e-47 |
| Msa0601380 | Msa1334560 | 0.824744 | 6.837281e-54 | -8.615850e-47 |
| Msa0601380 | Msa1336020 | 0.800154 | 1.646240e-48 | -8.615850e-47 |
| Msa0601380 | Msa1342360 | -0.823187 | 1.585253e-53 | -8.615850e-47 |
| Msa0601380 | Msa1352630 | -0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0601380 | Msa1361980 | 0.820501 | 6.634164e-53 | -8.615850e-47 |
| Msa0601380 | Msa1366140 | -0.812098 | 5.029935e-51 | -8.615850e-47 |
| Msa0601380 | Msa1368390 | 0.804476 | 2.121519e-49 | -8.615850e-47 |
| Msa0601380 | Msa1384410 | -0.820236 | 7.629130e-53 | -8.615850e-47 |
| Msa0601380 | Msa1384970 | -0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa0601380 | Msa1388720 | -0.802290 | 6.017828e-49 | -8.615850e-47 |
| Msa0601380 | Msa1392570 | -0.806347 | 8.596680e-50 | -8.615850e-47 |
| Msa0601380 | Msa1402010 | 0.827509 | 1.504651e-54 | -8.615850e-47 |
| Msa0601380 | Msa1405830 | 0.822369 | 2.458243e-53 | -8.615850e-47 |
| Msa0601380 | Msa1407810 | 0.816945 | 4.255496e-52 | -8.615850e-47 |
| Msa0601380 | Msa1410500 | -0.801430 | 9.036973e-49 | -8.615850e-47 |
| Msa0601380 | Msa1413020 | 0.817671 | 2.922645e-52 | -8.615850e-47 |
| Msa0601380 | Msa1413130 | 0.805799 | 1.121447e-49 | -8.615850e-47 |
| Msa0601380 | Msa1421630 | 0.931474 | 3.579677e-94 | -8.615850e-47 |
| Msa0601380 | Msa1422860 | 0.809937 | 1.478299e-50 | -8.615850e-47 |
| Msa0601380 | Msa1428230 | -0.831163 | 1.949974e-55 | -8.615850e-47 |
| Msa0601380 | Msa1432730 | -0.802611 | 5.168614e-49 | -8.615850e-47 |
| Msa0601380 | Msa1433360 | 0.814654 | 1.380210e-51 | -8.615850e-47 |
| Msa0601380 | Msa1435950 | -0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0601380 | Msa1437780 | 0.816772 | 4.655382e-52 | -8.615850e-47 |
| Msa0601380 | Msa1455360 | 0.814340 | 1.619385e-51 | -8.615850e-47 |
| Msa0601380 | Msa1457770 | 0.806604 | 7.588201e-50 | -8.615850e-47 |
| Msa0601380 | Msa1459130 | -0.813787 | 2.144983e-51 | -8.615850e-47 |
| Msa0601380 | Msa1461770 | 0.804730 | 1.877222e-49 | -8.615850e-47 |
| Msa0601380 | Msa1462610 | 0.808073 | 3.705210e-50 | -8.615850e-47 |
| Msa0601380 | Msa1462780 | 0.817284 | 3.571077e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601380 | MtrunA17_Chr4g0026371 | 90.832 | 589 | 46 | 1 | 1 | 581 | 1 | 589 | 0.0 | 1018 |
| Msa0601380 | MtrunA17_Chr8g0375501 | 46.441 | 590 | 297 | 7 | 7 | 581 | 6 | 591 | 0.0 | 556 |
| Msa0601380 | MtrunA17_Chr5g0434001 | 46.928 | 586 | 297 | 5 | 8 | 581 | 24 | 607 | 0.0 | 556 |
| Msa0601380 | MtrunA17_Chr6g0480551 | 45.194 | 593 | 308 | 5 | 1 | 581 | 1 | 588 | 0.0 | 539 |
| Msa0601380 | MtrunA17_Chr2g0277491 | 33.679 | 579 | 354 | 9 | 20 | 579 | 14 | 581 | 4.67e-96 | 305 |
| Msa0601380 | MtrunA17_Chr8g0380651 | 32.762 | 583 | 352 | 12 | 24 | 581 | 22 | 589 | 1.09e-93 | 298 |
| Msa0601380 | MtrunA17_Chr8g0342031 | 29.895 | 572 | 345 | 7 | 59 | 579 | 80 | 646 | 4.85e-93 | 298 |
| Msa0601380 | MtrunA17_Chr1g0150181 | 29.527 | 613 | 357 | 11 | 31 | 579 | 34 | 635 | 2.47e-88 | 286 |
| Msa0601380 | MtrunA17_Chr3g0136881 | 30.849 | 577 | 339 | 10 | 58 | 579 | 63 | 634 | 6.54e-86 | 280 |
| Msa0601380 | MtrunA17_Chr4g0065301 | 28.302 | 636 | 362 | 15 | 29 | 581 | 32 | 656 | 5.28e-74 | 248 |
| Msa0601380 | MtrunA17_Chr5g0448371 | 26.899 | 632 | 371 | 15 | 29 | 579 | 42 | 663 | 8.67e-58 | 205 |
| Msa0601380 | MtrunA17_Chr3g0120461 | 26.829 | 656 | 382 | 17 | 13 | 579 | 11 | 657 | 4.52e-57 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601380 | AT1G08350.3 | 51.370 | 584 | 269 | 6 | 8 | 581 | 11 | 589 | 0.0 | 610 |
| Msa0601380 | AT1G08350.2 | 51.370 | 584 | 269 | 6 | 8 | 581 | 11 | 589 | 0.0 | 610 |
| Msa0601380 | AT1G08350.1 | 51.874 | 507 | 242 | 2 | 77 | 581 | 2 | 508 | 0.0 | 553 |
| Msa0601380 | AT2G01970.1 | 45.531 | 593 | 310 | 5 | 1 | 581 | 1 | 592 | 0.0 | 548 |
| Msa0601380 | AT1G14670.1 | 46.206 | 593 | 306 | 5 | 1 | 581 | 1 | 592 | 0.0 | 548 |
| Msa0601380 | AT5G37310.1 | 46.271 | 590 | 304 | 4 | 4 | 581 | 5 | 593 | 0.0 | 545 |
| Msa0601380 | AT5G37310.2 | 46.271 | 590 | 304 | 4 | 4 | 581 | 5 | 593 | 0.0 | 545 |
| Msa0601380 | AT1G08350.4 | 49.709 | 515 | 244 | 6 | 8 | 512 | 11 | 520 | 6.51e-178 | 514 |
| Msa0601380 | AT1G10950.1 | 32.409 | 577 | 360 | 8 | 24 | 581 | 24 | 589 | 1.57e-95 | 304 |
| Msa0601380 | AT3G13772.1 | 30.343 | 613 | 352 | 11 | 31 | 579 | 38 | 639 | 1.64e-95 | 305 |
| Msa0601380 | AT2G24170.1 | 30.186 | 646 | 373 | 12 | 1 | 579 | 1 | 635 | 2.11e-92 | 297 |
| Msa0601380 | AT1G55130.1 | 28.414 | 637 | 380 | 12 | 7 | 579 | 11 | 635 | 3.45e-88 | 286 |
| Msa0601380 | AT5G25100.2 | 28.664 | 614 | 360 | 10 | 33 | 579 | 47 | 649 | 8.53e-83 | 272 |
| Msa0601380 | AT5G25100.1 | 28.548 | 606 | 367 | 10 | 28 | 579 | 49 | 642 | 1.22e-82 | 271 |
| Msa0601380 | AT5G10840.1 | 29.305 | 604 | 363 | 11 | 28 | 579 | 55 | 646 | 5.32e-82 | 270 |
| Msa0601380 | AT5G35160.2 | 26.929 | 661 | 385 | 16 | 8 | 581 | 9 | 658 | 1.61e-63 | 221 |
| Msa0601380 | AT5G35160.3 | 26.929 | 661 | 385 | 16 | 8 | 581 | 9 | 658 | 1.61e-63 | 221 |
| Msa0601380 | AT5G35160.4 | 26.929 | 661 | 385 | 16 | 8 | 581 | 9 | 658 | 1.61e-63 | 221 |
| Msa0601380 | AT5G35160.1 | 27.059 | 595 | 346 | 13 | 64 | 581 | 47 | 630 | 4.15e-61 | 214 |
| Msa0601380 | AT4G12650.1 | 27.445 | 634 | 365 | 15 | 29 | 579 | 29 | 650 | 3.02e-59 | 209 |
| Msa0601380 | AT2G24170.2 | 28.947 | 380 | 216 | 7 | 59 | 388 | 69 | 444 | 7.71e-48 | 173 |
Find 171 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGATGATCTTCCATTT+TGG | 0.104752 | 4_2:-43988597 | Msa0601380:CDS |
| AGCAAGTTAAACGATAATTT+TGG | 0.129845 | 4_2:-43984026 | Msa0601380:three_prime_UTR |
| TTACAACTATCCTTCTTTAT+TGG | 0.166873 | 4_2:-43984637 | Msa0601380:CDS |
| TCGGTTTAGGTCCAAGTTTC+AGG | 0.182537 | 4_2:-43985724 | Msa0601380:CDS |
| TATGCTTTCTTCCTGATATT+TGG | 0.187363 | 4_2:-43984595 | Msa0601380:CDS |
| ATCGTGATTATTAGTTTATT+TGG | 0.195282 | 4_2:-43985792 | Msa0601380:CDS |
| ACACCATTTCAAATGTTTAT+TGG | 0.207200 | 4_2:-43985642 | Msa0601380:CDS |
| ATACACTCTTCCTGGCATTT+TGG | 0.207826 | 4_2:-43985547 | Msa0601380:CDS |
| GACCACTCCAAAGTGTAATT+TGG | 0.216068 | 4_2:-43984160 | Msa0601380:three_prime_UTR |
| AATTCACTTATTCGGTTATC+TGG | 0.221535 | 4_2:-43988393 | Msa0601380:CDS |
| AAGCTTACAATTGATGAAAT+TGG | 0.229144 | 4_2:-43988664 | Msa0601380:CDS |
| TCCTAATTAGTTCTTGTTCT+AGG | 0.259683 | 4_2:+43989454 | None:intergenic |
| ACATTATTGCAATATCTTAC+AGG | 0.260840 | 4_2:-43985845 | Msa0601380:CDS |
| CCCATCCATTCTCAGCAAAT+TGG | 0.263581 | 4_2:+43986026 | None:intergenic |
| GATTCTATCTTCTTCACTAT+TGG | 0.267322 | 4_2:+43988781 | None:intergenic |
| TAGCGTACACCTGGTGTAAT+TGG | 0.283426 | 4_2:+43985589 | None:intergenic |
| ATGATTGATACTCTTCTCTT+TGG | 0.294726 | 4_2:-43984463 | Msa0601380:three_prime_UTR |
| ATTCTATCTTCTTCACTATT+GGG | 0.298051 | 4_2:+43988782 | None:intergenic |
| AGAGGGTAGGTTGTTAGAAT+TGG | 0.300458 | 4_2:-43984274 | Msa0601380:three_prime_UTR |
| CAAACTGAACATGTGTAAAA+AGG | 0.301015 | 4_2:+43988512 | None:intergenic |
| TGATGTTAAATTCACTTATT+CGG | 0.301127 | 4_2:-43988401 | Msa0601380:CDS |
| CACAGTTTGGAAGAGCTTTA+CGG | 0.324619 | 4_2:-43984317 | Msa0601380:three_prime_UTR |
| CGATCCCATTACTTGCATTC+GGG | 0.330440 | 4_2:-43985761 | Msa0601380:CDS |
| GAGTAATTGGATATCGGTTT+AGG | 0.339176 | 4_2:-43985737 | Msa0601380:CDS |
| AGAAAGGAGTGGAATTATAG+AGG | 0.344095 | 4_2:-43984292 | Msa0601380:three_prime_UTR |
| GTTATATCTACAGCGCGATT+TGG | 0.345977 | 4_2:+43988439 | None:intergenic |
| GTTTGTATGAGTTCAAATTC+AGG | 0.346786 | 4_2:-43988720 | Msa0601380:CDS |
| ACCTAGAACAAGAACTAATT+AGG | 0.351324 | 4_2:-43989455 | Msa0601380:five_prime_UTR |
| TCGATCCCATTACTTGCATT+CGG | 0.351439 | 4_2:-43985762 | Msa0601380:CDS |
| AACTGATGGCACCAAATATC+AGG | 0.360427 | 4_2:+43984584 | None:intergenic |
| GTTGAAGAAAACACAATCTA+TGG | 0.371936 | 4_2:-43989352 | Msa0601380:exon |
| CTTCTGTTCCTAGCAATTAT+CGG | 0.376000 | 4_2:-43986151 | Msa0601380:CDS |
| GGAGTTTCATGACTTATAAC+AGG | 0.383738 | 4_2:-43989411 | Msa0601380:intron |
| GAGAAGAGTGTTAGTCTAGC+TGG | 0.385735 | 4_2:-43985912 | Msa0601380:CDS |
| ACCGTAACCAAACATGAAAA+TGG | 0.387429 | 4_2:+43984696 | None:intergenic |
| CATACCTCCACCACCATTCA+TGG | 0.389249 | 4_2:+43985445 | None:intergenic |
| CTAGCGCAAATGAAGAAGAT+AGG | 0.390988 | 4_2:-43988092 | Msa0601380:CDS |
| GAAGATGAAAATTTGATTCA+TGG | 0.394649 | 4_2:-43988556 | Msa0601380:CDS |
| GGAAGCTGTTGAATCTCTTT+CGG | 0.396624 | 4_2:+43985678 | None:intergenic |
| AAATCCATGGCTGCACAGTT+TGG | 0.401672 | 4_2:-43984330 | Msa0601380:three_prime_UTR |
| TACAAAATATACACTCTTCC+TGG | 0.403164 | 4_2:-43985555 | Msa0601380:CDS |
| TCTGGAATGCCACAGAATTA+CGG | 0.407619 | 4_2:-43988375 | Msa0601380:CDS |
| ACAGTTTGGAAGAGCTTTAC+GGG | 0.409540 | 4_2:-43984316 | Msa0601380:three_prime_UTR |
| CCATGGATTTAGTCTTGATT+CGG | 0.410770 | 4_2:+43984343 | None:intergenic |
| GTCACAGCTGGACTCCCATT+GGG | 0.412663 | 4_2:-43985822 | Msa0601380:CDS |
| GTCCAAGTTTCAGGTCCCCT+TGG | 0.415276 | 4_2:-43985715 | Msa0601380:CDS |
| GAATGGTGAAGATGAGGAGA+AGG | 0.426866 | 4_2:+43989307 | None:intergenic |
| CATGGCCAATTTGCTGAGAA+TGG | 0.430352 | 4_2:-43986031 | Msa0601380:CDS |
| TCCAAGTTTCAGGTCCCCTT+GGG | 0.431667 | 4_2:-43985714 | Msa0601380:CDS |
| AACATCAATGCCAACATCCT+TGG | 0.435136 | 4_2:+43988417 | None:intergenic |
| ACTCACATTTAACTAACATC+AGG | 0.435532 | 4_2:+43984089 | None:intergenic |
| CAGATGAAAGAGCGAATAGA+AGG | 0.436318 | 4_2:+43986083 | None:intergenic |
| TCAAATATCTCGTATAAAGC+AGG | 0.441728 | 4_2:+43988233 | None:intergenic |
| AAGAGATTCAACAGCTTCCT+TGG | 0.444008 | 4_2:-43985674 | Msa0601380:CDS |
| GGTTGTTAGAATTGGAGATC+AGG | 0.446325 | 4_2:-43984266 | Msa0601380:three_prime_UTR |
| ACCCAAGGGGACCTGAAACT+TGG | 0.452480 | 4_2:+43985713 | None:intergenic |
| TTTGATAACAGTTTATTCCT+TGG | 0.452715 | 4_2:-43984422 | Msa0601380:three_prime_UTR |
| GTCGTAGAAGTGAAAGCATT+TGG | 0.455452 | 4_2:-43988466 | Msa0601380:CDS |
| TGGGATTCTTTACATTGGTC+CGG | 0.456365 | 4_2:-43985892 | Msa0601380:CDS |
| AGTTTGATGTTCTTTACAAC+GGG | 0.456822 | 4_2:-43988495 | Msa0601380:CDS |
| CCAGGTGTACGCTAGTTTGT+GGG | 0.458018 | 4_2:-43985580 | Msa0601380:CDS |
| AGCTTACAAGATTAGCAGTT+GGG | 0.461088 | 4_2:+43987984 | None:intergenic |
| CACCATGACTGTATGGATAG+AGG | 0.461983 | 4_2:+43986125 | None:intergenic |
| ACCAGGTGTACGCTAGTTTG+TGG | 0.462770 | 4_2:-43985581 | Msa0601380:CDS |
| TTGTGTATCGTAAAGTTCAT+TGG | 0.462873 | 4_2:-43988309 | Msa0601380:CDS |
| GGAGAAGGAGAATGAGGTGA+TGG | 0.465191 | 4_2:+43989322 | None:intergenic |
| TTCAACAGCTTCCTTGGTAC+AGG | 0.467031 | 4_2:-43985668 | Msa0601380:CDS |
| GAAGAGCTTTACGGGAAGAA+AGG | 0.469317 | 4_2:-43984308 | Msa0601380:three_prime_UTR |
| CCTCCAATAAACATTTGAAA+TGG | 0.469524 | 4_2:+43985639 | None:intergenic |
| ATTACGGTTTGAGAATAGAA+TGG | 0.470012 | 4_2:-43988359 | Msa0601380:CDS |
| GGTCACAGCTGGACTCCCAT+TGG | 0.470714 | 4_2:-43985823 | Msa0601380:CDS |
| GAGAAGGAGAATGAGGTGAT+GGG | 0.473388 | 4_2:+43989323 | None:intergenic |
| AGTAAGTTGAATAAACTTGA+TGG | 0.476846 | 4_2:-43989432 | Msa0601380:five_prime_UTR |
| ATGAAAATTTGATTCATGGT+GGG | 0.477845 | 4_2:-43988552 | Msa0601380:CDS |
| GAATAGAAGGACAAGCCAAC+TGG | 0.478682 | 4_2:+43986096 | None:intergenic |
| GCCAATTTGCTGAGAATGGA+TGG | 0.479155 | 4_2:-43986027 | Msa0601380:CDS |
| TGATGAAATTGGTATCTTGA+AGG | 0.481322 | 4_2:-43988653 | Msa0601380:CDS |
| GTGAAGAAGATAGAATCTCT+TGG | 0.482913 | 4_2:-43988775 | Msa0601380:CDS |
| CGGATATCTCTTTGTACCCA+AGG | 0.484114 | 4_2:+43985698 | None:intergenic |
| CCATTTCAAATGTTTATTGG+AGG | 0.484636 | 4_2:-43985639 | Msa0601380:CDS |
| AGCAAAACCAAATTACACTT+TGG | 0.485747 | 4_2:+43984153 | None:intergenic |
| AAGAAGATAGGGAGGTTGGT+TGG | 0.486649 | 4_2:-43988080 | Msa0601380:CDS |
| TGGATGAAAATTGCACCAAA+AGG | 0.486946 | 4_2:+43985609 | None:intergenic |
| TGAAAATTTGATTCATGGTG+GGG | 0.492528 | 4_2:-43988551 | Msa0601380:CDS |
| TTTGTATGAGTTCAAATTCA+GGG | 0.499515 | 4_2:-43988719 | Msa0601380:CDS |
| GAGAGTCCACCATGACTGTA+TGG | 0.501120 | 4_2:+43986118 | None:intergenic |
| AGATGAGGAGAAGGAGAATG+AGG | 0.503185 | 4_2:+43989316 | None:intergenic |
| AATAAGGACGGGTGCGGAGG+AGG | 0.503888 | 4_2:+43988030 | None:intergenic |
| TCACGATAATAGAGCCCAAT+GGG | 0.504953 | 4_2:+43985808 | None:intergenic |
| GAAAGGAGTGGAATTATAGA+GGG | 0.514988 | 4_2:-43984291 | Msa0601380:three_prime_UTR |
| AATGGTGATCGTTTGAGCAA+TGG | 0.518346 | 4_2:-43988742 | Msa0601380:CDS |
| TGTTGACCTGGGATTGTTGA+AGG | 0.519716 | 4_2:+43989197 | None:intergenic |
| ATTGTAGAATGGTGAAGATG+AGG | 0.521362 | 4_2:+43989301 | None:intergenic |
| CATTATTGCAATATCTTACA+GGG | 0.521402 | 4_2:-43985844 | Msa0601380:CDS |
| ATATCTTACAGGGTCACAGC+TGG | 0.526781 | 4_2:-43985834 | Msa0601380:CDS |
| CTAGCTGGGATTCTTTACAT+TGG | 0.529641 | 4_2:-43985897 | Msa0601380:CDS |
| ATCTTGAAGGAAGCTATAAA+CGG | 0.530516 | 4_2:-43988640 | Msa0601380:CDS |
| CGCACTGTAGCCAATAAAGA+AGG | 0.533327 | 4_2:+43984627 | None:intergenic |
| AGAAGAGTGTTAGTCTAGCT+GGG | 0.542187 | 4_2:-43985911 | Msa0601380:CDS |
| CTCAGCAAATTGGCCATGGA+AGG | 0.542407 | 4_2:+43986036 | None:intergenic |
| CTCACATTTAACTAACATCA+GGG | 0.545109 | 4_2:+43984090 | None:intergenic |
| TAGCGCAAATGAAGAAGATA+GGG | 0.545410 | 4_2:-43988091 | Msa0601380:CDS |
| CAGTTTGATGTTCTTTACAA+CGG | 0.550867 | 4_2:-43988496 | Msa0601380:CDS |
| AATGAAGAAGATAGGGAGGT+TGG | 0.554718 | 4_2:-43988084 | Msa0601380:CDS |
| TCTTCCAAACTGTGCAGCCA+TGG | 0.557389 | 4_2:+43984326 | None:intergenic |
| ACCATGACTGTATGGATAGA+GGG | 0.558598 | 4_2:+43986126 | None:intergenic |
| CAATTTGCAATCAAACATGT+TGG | 0.559250 | 4_2:+43984207 | None:intergenic |
| CATTCTCAGCAAATTGGCCA+TGG | 0.562379 | 4_2:+43986032 | None:intergenic |
| AGAAGGAGAATGAGGTGATG+GGG | 0.562448 | 4_2:+43989324 | None:intergenic |
| GGATATCTCTTTGTACCCAA+GGG | 0.562534 | 4_2:+43985699 | None:intergenic |
| CCCACAAACTAGCGTACACC+TGG | 0.564764 | 4_2:+43985580 | None:intergenic |
| TAGCTTACAAGATTAGCAGT+TGG | 0.564792 | 4_2:+43987983 | None:intergenic |
| TAGGTCCCTTCAACAATCCC+AGG | 0.566359 | 4_2:-43989203 | Msa0601380:intron |
| AGTGTCGCAGCCAAAATGCC+AGG | 0.566462 | 4_2:+43985537 | None:intergenic |
| TACTCAACAGCATCCTTCCA+TGG | 0.574888 | 4_2:-43986049 | Msa0601380:CDS |
| TCTCTTGGAGAAGTTCTCAA+TGG | 0.576224 | 4_2:-43988760 | Msa0601380:CDS |
| GGAGTGGAATTATAGAGGGT+AGG | 0.577279 | 4_2:-43984287 | Msa0601380:three_prime_UTR |
| CAAAGAAACTCTGAAACTGA+TGG | 0.577705 | 4_2:+43984570 | None:intergenic |
| ATTGTTGCGCTCGTAAATGT+TGG | 0.577891 | 4_2:-43985498 | Msa0601380:CDS |
| CAAATATCTCGTATAAAGCA+GGG | 0.578014 | 4_2:+43988234 | None:intergenic |
| GACATATGTTCAACTATCTG+TGG | 0.579107 | 4_2:-43985472 | Msa0601380:CDS |
| TCAAATCACATCTACAACGT+TGG | 0.580133 | 4_2:-43989255 | Msa0601380:CDS |
| GAAAATTTGATTCATGGTGG+GGG | 0.580878 | 4_2:-43988550 | Msa0601380:CDS |
| AACGTTGTAGATGTGATTTG+AGG | 0.581878 | 4_2:+43989257 | None:intergenic |
| AACGGTAGAAGATTGTAGAA+TGG | 0.584443 | 4_2:+43989290 | None:intergenic |
| GTAGATATAACCAAGGATGT+TGG | 0.585401 | 4_2:-43988427 | Msa0601380:CDS |
| CGATAATTGCTAGGAACAGA+AGG | 0.585429 | 4_2:+43986152 | None:intergenic |
| CTTGGTTGAATTCTTCAACA+AGG | 0.585822 | 4_2:-43984404 | Msa0601380:three_prime_UTR |
| ATTTGAGGTTGATGCGGTAA+CGG | 0.587799 | 4_2:+43989272 | None:intergenic |
| CCGAATCAAGACTAAATCCA+TGG | 0.588570 | 4_2:-43984343 | Msa0601380:three_prime_UTR |
| GATGAAAATTTGATTCATGG+TGG | 0.589754 | 4_2:-43988553 | Msa0601380:CDS |
| AGAGGGTACCGATAATTGCT+AGG | 0.591090 | 4_2:+43986143 | None:intergenic |
| GTCATGGTGGACTCTCCAGT+TGG | 0.591186 | 4_2:-43986111 | Msa0601380:CDS |
| TTTATACGAGATATTTGAAG+AGG | 0.593080 | 4_2:-43988228 | Msa0601380:CDS |
| TGCAGATCTGTGCTGTGTGG+TGG | 0.593952 | 4_2:-43984727 | Msa0601380:intron |
| TGGCAACCTCATAAACAACC+AGG | 0.593967 | 4_2:+43984227 | None:intergenic |
| TGGAAGACCATGAATGGTGG+TGG | 0.594903 | 4_2:-43985452 | Msa0601380:CDS |
| TCTCAAGCACAAAGTAACAT+TGG | 0.601261 | 4_2:-43984495 | Msa0601380:three_prime_UTR |
| ATCACGATAATAGAGCCCAA+TGG | 0.607721 | 4_2:+43985807 | None:intergenic |
| TTATACGAGATATTTGAAGA+GGG | 0.612050 | 4_2:-43988227 | Msa0601380:CDS |
| AAGATATTGCAATAATGTTG+AGG | 0.614798 | 4_2:+43985850 | None:intergenic |
| ATTCTCAAACCGTAATTCTG+TGG | 0.615995 | 4_2:+43988366 | None:intergenic |
| GGTCATTAGACACACGATTG+AGG | 0.618324 | 4_2:+43984179 | None:intergenic |
| GTTGACCTGGGATTGTTGAA+GGG | 0.620928 | 4_2:+43989198 | None:intergenic |
| GTTGGTTGGAAGTCAATCCA+TGG | 0.623172 | 4_2:-43988066 | Msa0601380:CDS |
| ACCCTCTATCCATACAGTCA+TGG | 0.624597 | 4_2:-43986127 | Msa0601380:CDS |
| CTTGTTGAAGAATTCAACCA+AGG | 0.628061 | 4_2:+43984405 | None:intergenic |
| TATCTGTGGAAGACCATGAA+TGG | 0.629462 | 4_2:-43985458 | Msa0601380:CDS |
| AACCAAATTACACTTTGGAG+TGG | 0.632487 | 4_2:+43984158 | None:intergenic |
| ATAGAGAATGCAACAAACAC+CGG | 0.633680 | 4_2:+43985873 | None:intergenic |
| ATCCCATTACTTGCATTCGG+GGG | 0.634423 | 4_2:-43985759 | Msa0601380:CDS |
| CGCAAATGAAGAAGATAGGG+AGG | 0.637904 | 4_2:-43988088 | Msa0601380:CDS |
| GATCCCATTACTTGCATTCG+GGG | 0.641089 | 4_2:-43985760 | Msa0601380:CDS |
| CTCTATCCATACAGTCATGG+TGG | 0.644933 | 4_2:-43986124 | Msa0601380:CDS |
| AAGACCATGAATGGTGGTGG+AGG | 0.651799 | 4_2:-43985449 | Msa0601380:intron |
| GGCAACCTCATAAACAACCA+GGG | 0.655525 | 4_2:+43984228 | None:intergenic |
| CAAAAGCAAAATGATGACGA+AGG | 0.660240 | 4_2:+43988270 | None:intergenic |
| CAGGTGTACGCTAGTTTGTG+GGG | 0.666363 | 4_2:-43985579 | Msa0601380:CDS |
| CCAATTTGCTGAGAATGGAT+GGG | 0.667467 | 4_2:-43986026 | Msa0601380:intron |
| TATGCAAGATCAAGAATGAG+CGG | 0.669114 | 4_2:-43984664 | Msa0601380:CDS |
| GAGCGCAACAATCACAATGA+CGG | 0.674592 | 4_2:+43985509 | None:intergenic |
| GTGTGCAGATCTGTGCTGTG+TGG | 0.676378 | 4_2:-43984730 | Msa0601380:intron |
| GATATCTCTTTGTACCCAAG+GGG | 0.684564 | 4_2:+43985700 | None:intergenic |
| GCTTTACGGGAAGAAAGGAG+TGG | 0.689124 | 4_2:-43984303 | Msa0601380:three_prime_UTR |
| GCAACCTCATAAACAACCAG+GGG | 0.692045 | 4_2:+43984229 | None:intergenic |
| GAGGCTTGAATACATCACCA+TGG | 0.694814 | 4_2:+43988049 | None:intergenic |
| TCGCGCTGTAGATATAACCA+AGG | 0.701856 | 4_2:-43988434 | Msa0601380:CDS |
| GATGTGATTTGAGGTTGATG+CGG | 0.702090 | 4_2:+43989266 | None:intergenic |
| AATGGTGTTCTCCTGTACCA+AGG | 0.705648 | 4_2:+43985657 | None:intergenic |
| CTGTGGAAGACCATGAATGG+TGG | 0.732393 | 4_2:-43985455 | Msa0601380:CDS |
| CAACCTCATAAACAACCAGG+GGG | 0.765718 | 4_2:+43984230 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAAATCAAATAATTA+AGG | - | chr4_2:43984659-43984678 | Msa0601380:CDS | 10.0% |
| !! | AATGAAAATCAAATAATTAA+GGG | - | chr4_2:43984660-43984679 | Msa0601380:CDS | 10.0% |
| !! | AAAAAAAAAAAAAAAACTTG+AGG | - | chr4_2:43985979-43985998 | Msa0601380:intron | 10.0% |
| !! | AAAGAAAAATTGAATGAAAA+TGG | + | chr4_2:43984398-43984417 | None:intergenic | 15.0% |
| !! | ATGAAAATCAAATAATTAAG+GGG | - | chr4_2:43984661-43984680 | Msa0601380:CDS | 15.0% |
| !! | ATTGTAAAATGAATATAGTT+AGG | + | chr4_2:43985400-43985419 | None:intergenic | 15.0% |
| !!! | CTATATTCATTTTACAATTT+AGG | - | chr4_2:43985402-43985421 | Msa0601380:intron | 15.0% |
| !! | TTAAATATTTCTTGATTGTT+TGG | + | chr4_2:43986005-43986024 | None:intergenic | 15.0% |
| !!! | CTTTTAATATTCTATATTCA+AGG | + | chr4_2:43987049-43987068 | None:intergenic | 15.0% |
| !! | AGAAATTAAATTGAAAAGAA+AGG | + | chr4_2:43987273-43987292 | None:intergenic | 15.0% |
| !!! | TTCTTTTCAATTTAATTTCT+TGG | - | chr4_2:43987273-43987292 | Msa0601380:intron | 15.0% |
| !! | GGTTAAAAATGAAATAAAAA+TGG | + | chr4_2:43987558-43987577 | None:intergenic | 15.0% |
| !!! | ACTTTGAAACTAAAATTTAT+CGG | + | chr4_2:43988496-43988515 | None:intergenic | 15.0% |
| !! | TGAAAATTGAATGAAAATAG+AGG | + | chr4_2:43984360-43984379 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAC+CGG | + | chr4_2:43984523-43984542 | None:intergenic | 20.0% |
| !! | AAATAATTAAGGGGTTTAAT+TGG | - | chr4_2:43984670-43984689 | Msa0601380:CDS | 20.0% |
| !! | TGATGTTAAATTCACTTATT+CGG | - | chr4_2:43985120-43985139 | Msa0601380:intron | 20.0% |
| !!! | AAGGATTTTATTACAAACAT+AGG | + | chr4_2:43985711-43985730 | None:intergenic | 20.0% |
| !! | GATATGATTTATAGTAAGTT+TGG | - | chr4_2:43986045-43986064 | Msa0601380:CDS | 20.0% |
| !! | TTCTAATATAGAAATCAAAG+AGG | - | chr4_2:43986417-43986436 | Msa0601380:intron | 20.0% |
| !! | AGAGGAATATTTATGTAAAT+AGG | - | chr4_2:43986693-43986712 | Msa0601380:intron | 20.0% |
| !!! | AAAAACCCAAATTTTGAATT+GGG | + | chr4_2:43986895-43986914 | None:intergenic | 20.0% |
| !!! | ATCGTGATTATTAGTTTATT+TGG | - | chr4_2:43987729-43987748 | Msa0601380:intron | 20.0% |
| !! | AGAAAAAACATTAAAAGTGA+TGG | + | chr4_2:43988138-43988157 | None:intergenic | 20.0% |
| !! | AATACATTTAATTGCTTCAA+AGG | - | chr4_2:43988562-43988581 | Msa0601380:CDS | 20.0% |
| !!! | TTTTAATAAGTACAGGAATA+GGG | - | chr4_2:43988585-43988604 | Msa0601380:CDS | 20.0% |
| !! | AGTAAGTTGAATAAACTTGA+TGG | - | chr4_2:43984089-43984108 | Msa0601380:three_prime_UTR | 25.0% |
| ! | CTACTTTGTTGACAAAAAAT+GGG | + | chr4_2:43984301-43984320 | None:intergenic | 25.0% |
| ! | TGGTAATTCATAGTATTCAT+AGG | + | chr4_2:43984445-43984464 | None:intergenic | 25.0% |
| !!! | TTTCATTTTTCTACATCATG+AGG | + | chr4_2:43984647-43984666 | None:intergenic | 25.0% |
| ! | ATTCTATCTTCTTCACTATT+GGG | + | chr4_2:43984742-43984761 | None:intergenic | 25.0% |
| ! | TTTGTATGAGTTCAAATTCA+GGG | - | chr4_2:43984802-43984821 | Msa0601380:intron | 25.0% |
| ! | AAGCTTACAATTGATGAAAT+TGG | - | chr4_2:43984857-43984876 | Msa0601380:intron | 25.0% |
| ! | GAAGATGAAAATTTGATTCA+TGG | - | chr4_2:43984965-43984984 | Msa0601380:intron | 25.0% |
| ! | ATGAAAATTTGATTCATGGT+GGG | - | chr4_2:43984969-43984988 | Msa0601380:intron | 25.0% |
| ! | TTTATACGAGATATTTGAAG+AGG | - | chr4_2:43985293-43985312 | Msa0601380:intron | 25.0% |
| ! | TTATACGAGATATTTGAAGA+GGG | - | chr4_2:43985294-43985313 | Msa0601380:intron | 25.0% |
| !!! | TACAAGAGAAGATTTTTAGT+AGG | - | chr4_2:43985357-43985376 | Msa0601380:intron | 25.0% |
| ! | ACACTTCATATATTGTTATG+AGG | + | chr4_2:43985656-43985675 | None:intergenic | 25.0% |
| !! | ATTTTGTACAAGATAAGAGT+GGG | - | chr4_2:43985848-43985867 | Msa0601380:CDS | 25.0% |
| ! | GTCAATAAATTCATCTTTGA+AGG | - | chr4_2:43986151-43986170 | Msa0601380:CDS | 25.0% |
| ! | TACAGAAGTTGAAAGAATTA+GGG | + | chr4_2:43986224-43986243 | None:intergenic | 25.0% |
| ! | TAGAAAGATATCATATTCCA+TGG | + | chr4_2:43986263-43986282 | None:intergenic | 25.0% |
| !! | TTTTCTCATGTTACACAAAT+GGG | + | chr4_2:43986485-43986504 | None:intergenic | 25.0% |
| ! | CAATTTACAAGTAAACTGTT+AGG | - | chr4_2:43986607-43986626 | Msa0601380:intron | 25.0% |
| ! | ACTGTTAGGATATAGAATAA+AGG | - | chr4_2:43986621-43986640 | Msa0601380:intron | 25.0% |
| ! | CTGTTAGGATATAGAATAAA+GGG | - | chr4_2:43986622-43986641 | Msa0601380:intron | 25.0% |
| ! | TGTTAGGATATAGAATAAAG+GGG | - | chr4_2:43986623-43986642 | Msa0601380:intron | 25.0% |
| ! | TTAAGAGTAATTAGAGTAGT+TGG | - | chr4_2:43986656-43986675 | Msa0601380:intron | 25.0% |
| ! | GGAATATTTATGTAAATAGG+AGG | - | chr4_2:43986696-43986715 | Msa0601380:intron | 25.0% |
| !! | CAAAAACCCAAATTTTGAAT+TGG | + | chr4_2:43986896-43986915 | None:intergenic | 25.0% |
| ! | AAAGAATATTAAAGGATCGA+GGG | - | chr4_2:43986987-43987006 | Msa0601380:intron | 25.0% |
| ! | ATATTAAAAGTAGTTAGAGC+AGG | - | chr4_2:43987059-43987078 | Msa0601380:intron | 25.0% |
| !! | GAAAGGACTATTTTATTGAA+AGG | + | chr4_2:43987256-43987275 | None:intergenic | 25.0% |
| ! | AAAGTTAACGACTTTATGTT+AGG | + | chr4_2:43987301-43987320 | None:intergenic | 25.0% |
| ! | AATTCTATATGCATTTCTCA+AGG | - | chr4_2:43987519-43987538 | Msa0601380:intron | 25.0% |
| ! | AAGATATTGCAATAATGTTG+AGG | + | chr4_2:43987674-43987693 | None:intergenic | 25.0% |
| ! | ACATTATTGCAATATCTTAC+AGG | - | chr4_2:43987676-43987695 | Msa0601380:intron | 25.0% |
| ! | CATTATTGCAATATCTTACA+GGG | - | chr4_2:43987677-43987696 | Msa0601380:intron | 25.0% |
| ! | ACACCATTTCAAATGTTTAT+TGG | - | chr4_2:43987879-43987898 | Msa0601380:intron | 25.0% |
| !! | TGATTTTACTTAAGATGTCA+TGG | + | chr4_2:43988218-43988237 | None:intergenic | 25.0% |
| ! | ACATGCATATCTATCTATTT+GGG | + | chr4_2:43988325-43988344 | None:intergenic | 25.0% |
| ! | TACATGCATATCTATCTATT+TGG | + | chr4_2:43988326-43988345 | None:intergenic | 25.0% |
| ! | TAAGAATTGTGATATCAATG+TGG | + | chr4_2:43988441-43988460 | None:intergenic | 25.0% |
| !! | TATCTCTATCTTTGTTTACT+AGG | + | chr4_2:43988469-43988488 | None:intergenic | 25.0% |
| ! | TAGTTTCAAAGTTTGTACAT+AGG | - | chr4_2:43988504-43988523 | Msa0601380:CDS | 25.0% |
| !!! | TCAAAGGTTTTAATAAGTAC+AGG | - | chr4_2:43988578-43988597 | Msa0601380:CDS | 25.0% |
| !!! | GTTTTAATAAGTACAGGAAT+AGG | - | chr4_2:43988584-43988603 | Msa0601380:CDS | 25.0% |
| !! | TGTTCTCTTTTCTTTAATTC+TGG | - | chr4_2:43988631-43988650 | Msa0601380:CDS | 25.0% |
| !! | TTACAAAGCTTTATACTGAA+GGG | + | chr4_2:43988748-43988767 | None:intergenic | 25.0% |
| !! | ATTACAAAGCTTTATACTGA+AGG | + | chr4_2:43988749-43988768 | None:intergenic | 25.0% |
| ! | TTACAACTATCCTTCTTTAT+TGG | - | chr4_2:43988884-43988903 | Msa0601380:intron | 25.0% |
| !! | TTTGATAACAGTTTATTCCT+TGG | - | chr4_2:43989099-43989118 | Msa0601380:intron | 25.0% |
| !! | AGCAAGTTAAACGATAATTT+TGG | - | chr4_2:43989495-43989514 | Msa0601380:five_prime_UTR | 25.0% |
| !! | GCAAGTTAAACGATAATTTT+GGG | - | chr4_2:43989496-43989515 | Msa0601380:five_prime_UTR | 25.0% |
| ACCTAGAACAAGAACTAATT+AGG | - | chr4_2:43984066-43984085 | Msa0601380:three_prime_UTR | 30.0% | |
| ! | TCCTAATTAGTTCTTGTTCT+AGG | + | chr4_2:43984070-43984089 | None:intergenic | 30.0% |
| GTTGAAGAAAACACAATCTA+TGG | - | chr4_2:43984169-43984188 | Msa0601380:three_prime_UTR | 30.0% | |
| CCTACTTTGTTGACAAAAAA+TGG | + | chr4_2:43984302-43984321 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTCAACAAAGT+AGG | - | chr4_2:43984299-43984318 | Msa0601380:three_prime_UTR | 30.0% |
| TAAGGGGTTTAATTGGAATT+TGG | - | chr4_2:43984677-43984696 | Msa0601380:CDS | 30.0% | |
| ! | AATTGGAATTTGGAACTACT+TGG | - | chr4_2:43984687-43984706 | Msa0601380:CDS | 30.0% |
| GAACTACTTGGATTTGAAAA+AGG | - | chr4_2:43984699-43984718 | Msa0601380:CDS | 30.0% | |
| GATTCTATCTTCTTCACTAT+TGG | + | chr4_2:43984743-43984762 | None:intergenic | 30.0% | |
| GTTTGTATGAGTTCAAATTC+AGG | - | chr4_2:43984801-43984820 | Msa0601380:intron | 30.0% | |
| TGATGAAATTGGTATCTTGA+AGG | - | chr4_2:43984868-43984887 | Msa0601380:intron | 30.0% | |
| ATCTTGAAGGAAGCTATAAA+CGG | - | chr4_2:43984881-43984900 | Msa0601380:intron | 30.0% | |
| !! | ATCTTGATGATCTTCCATTT+TGG | - | chr4_2:43984924-43984943 | Msa0601380:intron | 30.0% |
| !! | TCTTGATGATCTTCCATTTT+GGG | - | chr4_2:43984925-43984944 | Msa0601380:intron | 30.0% |
| GATGAAAATTTGATTCATGG+TGG | - | chr4_2:43984968-43984987 | Msa0601380:intron | 30.0% | |
| TGAAAATTTGATTCATGGTG+GGG | - | chr4_2:43984970-43984989 | Msa0601380:intron | 30.0% | |
| CAAACTGAACATGTGTAAAA+AGG | + | chr4_2:43985012-43985031 | None:intergenic | 30.0% | |
| CAGTTTGATGTTCTTTACAA+CGG | - | chr4_2:43985025-43985044 | Msa0601380:intron | 30.0% | |
| AGTTTGATGTTCTTTACAAC+GGG | - | chr4_2:43985026-43985045 | Msa0601380:intron | 30.0% | |
| AATTCACTTATTCGGTTATC+TGG | - | chr4_2:43985128-43985147 | Msa0601380:intron | 30.0% | |
| ATTACGGTTTGAGAATAGAA+TGG | - | chr4_2:43985162-43985181 | Msa0601380:intron | 30.0% | |
| TTGTGTATCGTAAAGTTCAT+TGG | - | chr4_2:43985212-43985231 | Msa0601380:intron | 30.0% | |
| CAAATATCTCGTATAAAGCA+GGG | + | chr4_2:43985290-43985309 | None:intergenic | 30.0% | |
| TCAAATATCTCGTATAAAGC+AGG | + | chr4_2:43985291-43985310 | None:intergenic | 30.0% | |
| ACAACAGCAAAAAATAAGGA+CGG | + | chr4_2:43985506-43985525 | None:intergenic | 30.0% | |
| !!! | TCCTTATTTTTTGCTGTTGT+GGG | - | chr4_2:43985506-43985525 | Msa0601380:CDS | 30.0% |
| AAAACTAGAGGCTGAATATT+TGG | + | chr4_2:43985620-43985639 | None:intergenic | 30.0% | |
| GTCTAGATTTAGATTGGTAA+AGG | + | chr4_2:43985730-43985749 | None:intergenic | 30.0% | |
| ! | TTGGTAGTCTAGATTTAGAT+TGG | + | chr4_2:43985736-43985755 | None:intergenic | 30.0% |
| !! | AAGAGAAAAAAGAGTACTTC+TGG | + | chr4_2:43985772-43985791 | None:intergenic | 30.0% |
| ! | GATTTTGTACAAGATAAGAG+TGG | - | chr4_2:43985847-43985866 | Msa0601380:CDS | 30.0% |
| ! | GATTTTTGCATAAGGTGATT+CGG | - | chr4_2:43985877-43985896 | Msa0601380:CDS | 30.0% |
| ! | ATTTTTGCATAAGGTGATTC+GGG | - | chr4_2:43985878-43985897 | Msa0601380:CDS | 30.0% |
| AAGAGTAGCATAAATGTTAG+AGG | - | chr4_2:43985942-43985961 | Msa0601380:intron | 30.0% | |
| AAGCATTTACCTATTAGACA+GGG | + | chr4_2:43986089-43986108 | None:intergenic | 30.0% | |
| GTACAGAAGTTGAAAGAATT+AGG | + | chr4_2:43986225-43986244 | None:intergenic | 30.0% | |
| CAAACACAACATTTAGTCAA+GGG | + | chr4_2:43986339-43986358 | None:intergenic | 30.0% | |
| ACAAACACAACATTTAGTCA+AGG | + | chr4_2:43986340-43986359 | None:intergenic | 30.0% | |
| CATGCATTGTATGTGTTTAA+GGG | + | chr4_2:43986386-43986405 | None:intergenic | 30.0% | |
| ACATGCATTGTATGTGTTTA+AGG | + | chr4_2:43986387-43986406 | None:intergenic | 30.0% | |
| ! | CTTTTCTCATGTTACACAAA+TGG | + | chr4_2:43986486-43986505 | None:intergenic | 30.0% |
| TATGTAAATAGGAGGATACA+AGG | - | chr4_2:43986704-43986723 | Msa0601380:intron | 30.0% | |
| ! | GATTTTACGTTCCTAATTTG+AGG | - | chr4_2:43986833-43986852 | Msa0601380:intron | 30.0% |
| ATCTAGCCCAATTCAAAATT+TGG | - | chr4_2:43986886-43986905 | Msa0601380:intron | 30.0% | |
| TCTAGCCCAATTCAAAATTT+GGG | - | chr4_2:43986887-43986906 | Msa0601380:intron | 30.0% | |
| CGATCCTTTAATATTCTTTC+TGG | + | chr4_2:43986986-43987005 | None:intergenic | 30.0% | |
| GAAAGAATATTAAAGGATCG+AGG | - | chr4_2:43986986-43987005 | Msa0601380:intron | 30.0% | |
| ! | TAGAAAAGTGCATGTTAGTA+AGG | + | chr4_2:43987337-43987356 | None:intergenic | 30.0% |
| CCTCCAATAAACATTTGAAA+TGG | + | chr4_2:43987885-43987904 | None:intergenic | 30.0% | |
| CCATTTCAAATGTTTATTGG+AGG | - | chr4_2:43987882-43987901 | Msa0601380:intron | 30.0% | |
| ! | AATTTTCATCCAATTACACC+AGG | - | chr4_2:43987923-43987942 | Msa0601380:intron | 30.0% |
| TACAAAATATACACTCTTCC+TGG | - | chr4_2:43987966-43987985 | Msa0601380:intron | 30.0% | |
| TCAAGTACACAATCAAAAGA+AGG | + | chr4_2:43988173-43988192 | None:intergenic | 30.0% | |
| TTAAGATGTCATGGCTATTA+AGG | + | chr4_2:43988209-43988228 | None:intergenic | 30.0% | |
| ! | CTATCTTTGTTTACTAGGAT+GGG | + | chr4_2:43988464-43988483 | None:intergenic | 30.0% |
| ! | TCTATCTTTGTTTACTAGGA+TGG | + | chr4_2:43988465-43988484 | None:intergenic | 30.0% |
| TTTCAAAGTTTGTACATAGG+AGG | - | chr4_2:43988507-43988526 | Msa0601380:CDS | 30.0% | |
| TATGCTTTCTTCCTGATATT+TGG | - | chr4_2:43988926-43988945 | Msa0601380:intron | 30.0% | |
| ATGATTGATACTCTTCTCTT+TGG | - | chr4_2:43989058-43989077 | Msa0601380:intron | 30.0% | |
| CAATTTGCAATCAAACATGT+TGG | + | chr4_2:43989317-43989336 | None:intergenic | 30.0% | |
| AGCAAAACCAAATTACACTT+TGG | + | chr4_2:43989371-43989390 | None:intergenic | 30.0% | |
| CTCACATTTAACTAACATCA+GGG | + | chr4_2:43989434-43989453 | None:intergenic | 30.0% | |
| ACTCACATTTAACTAACATC+AGG | + | chr4_2:43989435-43989454 | None:intergenic | 30.0% | |
| GGAGTTTCATGACTTATAAC+AGG | - | chr4_2:43984110-43984129 | Msa0601380:three_prime_UTR | 35.0% | |
| TGACTTATAACAGGTGTAAG+AGG | - | chr4_2:43984119-43984138 | Msa0601380:three_prime_UTR | 35.0% | |
| ATTGTAGAATGGTGAAGATG+AGG | + | chr4_2:43984223-43984242 | None:intergenic | 35.0% | |
| AACGGTAGAAGATTGTAGAA+TGG | + | chr4_2:43984234-43984253 | None:intergenic | 35.0% | |
| AACGTTGTAGATGTGATTTG+AGG | + | chr4_2:43984267-43984286 | None:intergenic | 35.0% | |
| TCAAATCACATCTACAACGT+TGG | - | chr4_2:43984266-43984285 | Msa0601380:three_prime_UTR | 35.0% | |
| ACAATAACACTGACATGTGT+CGG | - | chr4_2:43984587-43984606 | Msa0601380:CDS | 35.0% | |
| ! | TTTTTCTACATCATGAGGCA+CGG | + | chr4_2:43984642-43984661 | None:intergenic | 35.0% |
| GTGAAGAAGATAGAATCTCT+TGG | - | chr4_2:43984746-43984765 | Msa0601380:intron | 35.0% | |
| !! | CTTGATGATCTTCCATTTTG+GGG | - | chr4_2:43984926-43984945 | Msa0601380:intron | 35.0% |
| !! | TTGATGATCTTCCATTTTGG+GGG | - | chr4_2:43984927-43984946 | Msa0601380:intron | 35.0% |
| GAAAATTTGATTCATGGTGG+GGG | - | chr4_2:43984971-43984990 | Msa0601380:intron | 35.0% | |
| GTAGATATAACCAAGGATGT+TGG | - | chr4_2:43985094-43985113 | Msa0601380:intron | 35.0% | |
| ATTCTCAAACCGTAATTCTG+TGG | + | chr4_2:43985158-43985177 | None:intergenic | 35.0% | |
| ! | CAAAAGCAAAATGATGACGA+AGG | + | chr4_2:43985254-43985273 | None:intergenic | 35.0% |
| ! | CTTCGTCATCATTTTGCTTT+TGG | - | chr4_2:43985252-43985271 | Msa0601380:intron | 35.0% |
| TAGCGCAAATGAAGAAGATA+GGG | - | chr4_2:43985430-43985449 | Msa0601380:intron | 35.0% | |
| CAACAGCAAAAAATAAGGAC+GGG | + | chr4_2:43985505-43985524 | None:intergenic | 35.0% | |
| !!! | GTCCTTATTTTTTGCTGTTG+TGG | - | chr4_2:43985505-43985524 | Msa0601380:CDS | 35.0% |
| TCCCACAACAGCAAAAAATA+AGG | + | chr4_2:43985510-43985529 | None:intergenic | 35.0% | |
| !!! | ATTTTTTGCTGTTGTGGGAA+TGG | - | chr4_2:43985511-43985530 | Msa0601380:CDS | 35.0% |
| !!! | TTTTTTGCTGTTGTGGGAAT+GGG | - | chr4_2:43985512-43985531 | Msa0601380:CDS | 35.0% |
| AGCTTACAAGATTAGCAGTT+GGG | + | chr4_2:43985540-43985559 | None:intergenic | 35.0% | |
| TAGCTTACAAGATTAGCAGT+TGG | + | chr4_2:43985541-43985560 | None:intergenic | 35.0% | |
| !!! | TTCAGCCTCTAGTTTTTACA+TGG | - | chr4_2:43985624-43985643 | Msa0601380:CDS | 35.0% |
| CAATGCCATGTAAAAACTAG+AGG | + | chr4_2:43985632-43985651 | None:intergenic | 35.0% | |
| AGACTACCAAGTGATAGTAA+AGG | - | chr4_2:43985746-43985765 | Msa0601380:CDS | 35.0% | |
| ! | CTCTTGATTTTTGCTTTCAC+TGG | - | chr4_2:43985787-43985806 | Msa0601380:CDS | 35.0% |
| TTACCTATTAGACAGGGTAT+TGG | + | chr4_2:43986083-43986102 | None:intergenic | 35.0% | |
| ! | GAAGCATTTACCTATTAGAC+AGG | + | chr4_2:43986090-43986109 | None:intergenic | 35.0% |
| TTCTCACAAGTAACAAAGTC+TGG | + | chr4_2:43986130-43986149 | None:intergenic | 35.0% | |
| GAAGTTGAAAGAATTAGGGT+TGG | + | chr4_2:43986220-43986239 | None:intergenic | 35.0% | |
| !! | TTGTTTTTCTCATGTCCCTT+GGG | + | chr4_2:43986590-43986609 | None:intergenic | 35.0% |
| !! | ATTGTTTTTCTCATGTCCCT+TGG | + | chr4_2:43986591-43986610 | None:intergenic | 35.0% |
| GAGTAATTAGAGTAGTTGGT+TGG | - | chr4_2:43986660-43986679 | Msa0601380:intron | 35.0% | |
| ATGAACTTTGGCCTCAAATT+AGG | + | chr4_2:43986847-43986866 | None:intergenic | 35.0% | |
| ! | AATTTGAGGCCAAAGTTCAT+TGG | - | chr4_2:43986847-43986866 | Msa0601380:intron | 35.0% |
| ! | ATTTGAGGCCAAAGTTCATT+GGG | - | chr4_2:43986848-43986867 | Msa0601380:intron | 35.0% |
| GGGTCCAGAAAGAATATTAA+AGG | - | chr4_2:43986979-43986998 | Msa0601380:intron | 35.0% | |
| AATATTAAAGGATCGAGGGA+AGG | - | chr4_2:43986991-43987010 | Msa0601380:intron | 35.0% | |
| AAGGAAGATACAAGGATAGA+GGG | - | chr4_2:43987019-43987038 | Msa0601380:intron | 35.0% | |
| TTAAAAGTAGTTAGAGCAGG+TGG | - | chr4_2:43987062-43987081 | Msa0601380:intron | 35.0% | |
| ACAGGAATCTTTGCAGAAAT+AGG | - | chr4_2:43987091-43987110 | Msa0601380:intron | 35.0% | |
| ! | ACTAACATGCACTTTTCTAC+AGG | - | chr4_2:43987338-43987357 | Msa0601380:intron | 35.0% |
| CTTCTGTTCCTAGCAATTAT+CGG | - | chr4_2:43987370-43987389 | Msa0601380:intron | 35.0% | |
| !!! | CTCTTTCATCTGTTTTTGCT+GGG | - | chr4_2:43987449-43987468 | Msa0601380:intron | 35.0% |
| AGTCAAGACAGAGAAATAGT+TGG | + | chr4_2:43987579-43987598 | None:intergenic | 35.0% | |
| ATAGAGAATGCAACAAACAC+CGG | + | chr4_2:43987651-43987670 | None:intergenic | 35.0% | |
| !! | GAGTAATTGGATATCGGTTT+AGG | - | chr4_2:43987784-43987803 | Msa0601380:intron | 35.0% |
| !!! | ATTGGAGGTTTTGTTCCTTT+TGG | - | chr4_2:43987897-43987916 | Msa0601380:intron | 35.0% |
| TGGATGAAAATTGCACCAAA+AGG | + | chr4_2:43987915-43987934 | None:intergenic | 35.0% | |
| GACATATGTTCAACTATCTG+TGG | - | chr4_2:43988049-43988068 | Msa0601380:CDS | 35.0% | |
| ACAATCAAAAGAAGGAAGCT+AGG | + | chr4_2:43988165-43988184 | None:intergenic | 35.0% | |
| TATGCATGTAACTGATCTTG+TGG | - | chr4_2:43988336-43988355 | Msa0601380:CDS | 35.0% | |
| ! | TGATCTTGTGGTTTTCTGTA+GGG | - | chr4_2:43988348-43988367 | Msa0601380:CDS | 35.0% |
| AATGTGGATATTAAGCCATG+AGG | + | chr4_2:43988425-43988444 | None:intergenic | 35.0% | |
| !! | TCAACAGCCATTTTCATGTT+TGG | - | chr4_2:43988818-43988837 | Msa0601380:intron | 35.0% |
| !! | GCCATTTTCATGTTTGGTTA+CGG | - | chr4_2:43988824-43988843 | Msa0601380:intron | 35.0% |
| ACCGTAACCAAACATGAAAA+TGG | + | chr4_2:43988828-43988847 | None:intergenic | 35.0% | |
| TATGCAAGATCAAGAATGAG+CGG | - | chr4_2:43988857-43988876 | Msa0601380:intron | 35.0% | |
| !! | CAAAGAAACTCTGAAACTGA+TGG | + | chr4_2:43988954-43988973 | None:intergenic | 35.0% |
| TCTCAAGCACAAAGTAACAT+TGG | - | chr4_2:43989026-43989045 | Msa0601380:intron | 35.0% | |
| CTTGTTGAAGAATTCAACCA+AGG | + | chr4_2:43989119-43989138 | None:intergenic | 35.0% | |
| CTTGGTTGAATTCTTCAACA+AGG | - | chr4_2:43989117-43989136 | Msa0601380:intron | 35.0% | |
| !! | CCATGGATTTAGTCTTGATT+CGG | + | chr4_2:43989181-43989200 | None:intergenic | 35.0% |
| AGAAAGGAGTGGAATTATAG+AGG | - | chr4_2:43989229-43989248 | Msa0601380:CDS | 35.0% | |
| GAAAGGAGTGGAATTATAGA+GGG | - | chr4_2:43989230-43989249 | Msa0601380:CDS | 35.0% | |
| ! | AACCAAATTACACTTTGGAG+TGG | + | chr4_2:43989366-43989385 | None:intergenic | 35.0% |
| !! | ATTTGAGGTTGATGCGGTAA+CGG | + | chr4_2:43984252-43984271 | None:intergenic | 40.0% |
| !! | GATGTGATTTGAGGTTGATG+CGG | + | chr4_2:43984258-43984277 | None:intergenic | 40.0% |
| GTGAAGAGAATTGTTGACCT+GGG | + | chr4_2:43984338-43984357 | None:intergenic | 40.0% | |
| GAATTACCATTCTGCAAACC+AGG | - | chr4_2:43984456-43984475 | Msa0601380:three_prime_UTR | 40.0% | |
| ATGATGAGATCTAACTGACC+TGG | + | chr4_2:43984477-43984496 | None:intergenic | 40.0% | |
| TCTCTTGGAGAAGTTCTCAA+TGG | - | chr4_2:43984761-43984780 | Msa0601380:intron | 40.0% | |
| AATGGTGATCGTTTGAGCAA+TGG | - | chr4_2:43984779-43984798 | Msa0601380:intron | 40.0% | |
| !! | GTCGTAGAAGTGAAAGCATT+TGG | - | chr4_2:43985055-43985074 | Msa0601380:intron | 40.0% |
| GTTATATCTACAGCGCGATT+TGG | + | chr4_2:43985085-43985104 | None:intergenic | 40.0% | |
| AACATCAATGCCAACATCCT+TGG | + | chr4_2:43985107-43985126 | None:intergenic | 40.0% | |
| ! | TCTGGAATGCCACAGAATTA+CGG | - | chr4_2:43985146-43985165 | Msa0601380:intron | 40.0% |
| CTAGCGCAAATGAAGAAGAT+AGG | - | chr4_2:43985429-43985448 | Msa0601380:intron | 40.0% | |
| AATGAAGAAGATAGGGAGGT+TGG | - | chr4_2:43985437-43985456 | Msa0601380:intron | 40.0% | |
| ! | TTCTGGCCTTTACTATCACT+TGG | + | chr4_2:43985755-43985774 | None:intergenic | 40.0% |
| ! | CACTGGTCTGTTCTTATGTA+TGG | - | chr4_2:43985804-43985823 | Msa0601380:CDS | 40.0% |
| GTCTGTTCTTATGTATGGTG+TGG | - | chr4_2:43985809-43985828 | Msa0601380:CDS | 40.0% | |
| TTGTACAAGATAAGAGTGGG+TGG | - | chr4_2:43985851-43985870 | Msa0601380:CDS | 40.0% | |
| ! | GGTGGTAGGATTTTTGCATA+AGG | - | chr4_2:43985869-43985888 | Msa0601380:CDS | 40.0% |
| !! | TTAGACAGGGTATTGGCTTA+TGG | + | chr4_2:43986076-43986095 | None:intergenic | 40.0% |
| AAGCCAATACCCTGTCTAAT+AGG | - | chr4_2:43986077-43986096 | Msa0601380:CDS | 40.0% | |
| TATTCCATGGCAAAGATACC+AGG | + | chr4_2:43986250-43986269 | None:intergenic | 40.0% | |
| TGGGGGACATCTGATAAAAT+TGG | + | chr4_2:43986571-43986590 | None:intergenic | 40.0% | |
| ! | ATTTTATCAGATGTCCCCCA+AGG | - | chr4_2:43986571-43986590 | Msa0601380:intron | 40.0% |
| ! | TTTTATCAGATGTCCCCCAA+GGG | - | chr4_2:43986572-43986591 | Msa0601380:intron | 40.0% |
| ! | TGTTTTTCTCATGTCCCTTG+GGG | + | chr4_2:43986589-43986608 | None:intergenic | 40.0% |
| ! | AGAGTAGTTGGTTGGTTAGT+CGG | - | chr4_2:43986668-43986687 | Msa0601380:intron | 40.0% |
| ! | AATTGGGCTAGATGTACCTT+GGG | + | chr4_2:43986879-43986898 | None:intergenic | 40.0% |
| !! | AGGCATTGAAGGAAGATACA+AGG | - | chr4_2:43987011-43987030 | Msa0601380:intron | 40.0% |
| GAAGGAAGATACAAGGATAG+AGG | - | chr4_2:43987018-43987037 | Msa0601380:intron | 40.0% | |
| AAGATACAAGGATAGAGGGA+AGG | - | chr4_2:43987023-43987042 | Msa0601380:intron | 40.0% | |
| GGAATCTTTGCAGAAATAGG+AGG | - | chr4_2:43987094-43987113 | Msa0601380:intron | 40.0% | |
| TGCAGAAATAGGAGGATACA+AGG | - | chr4_2:43987102-43987121 | Msa0601380:intron | 40.0% | |
| ATAGGAGGATACAAGGATAG+AGG | - | chr4_2:43987109-43987128 | Msa0601380:intron | 40.0% | |
| TAGGAGGATACAAGGATAGA+GGG | - | chr4_2:43987110-43987129 | Msa0601380:intron | 40.0% | |
| TTGTAGAGGAGGAAACTCTT+GGG | - | chr4_2:43987181-43987200 | Msa0601380:intron | 40.0% | |
| CGATAATTGCTAGGAACAGA+AGG | + | chr4_2:43987372-43987391 | None:intergenic | 40.0% | |
| ACCATGACTGTATGGATAGA+GGG | + | chr4_2:43987398-43987417 | None:intergenic | 40.0% | |
| CAGATGAAAGAGCGAATAGA+AGG | + | chr4_2:43987441-43987460 | None:intergenic | 40.0% | |
| !!! | GCTCTTTCATCTGTTTTTGC+TGG | - | chr4_2:43987448-43987467 | Msa0601380:intron | 40.0% |
| !! | CCAATTTGCTGAGAATGGAT+GGG | - | chr4_2:43987495-43987514 | Msa0601380:intron | 40.0% |
| !! | AGAAGAGTGTTAGTCTAGCT+GGG | - | chr4_2:43987610-43987629 | Msa0601380:intron | 40.0% |
| CTAGCTGGGATTCTTTACAT+TGG | - | chr4_2:43987624-43987643 | Msa0601380:intron | 40.0% | |
| TGGGATTCTTTACATTGGTC+CGG | - | chr4_2:43987629-43987648 | Msa0601380:intron | 40.0% | |
| TCACGATAATAGAGCCCAAT+GGG | + | chr4_2:43987716-43987735 | None:intergenic | 40.0% | |
| ATCACGATAATAGAGCCCAA+TGG | + | chr4_2:43987717-43987736 | None:intergenic | 40.0% | |
| TCGATCCCATTACTTGCATT+CGG | - | chr4_2:43987759-43987778 | Msa0601380:intron | 40.0% | |
| GATATCTCTTTGTACCCAAG+GGG | + | chr4_2:43987824-43987843 | None:intergenic | 40.0% | |
| GGATATCTCTTTGTACCCAA+GGG | + | chr4_2:43987825-43987844 | None:intergenic | 40.0% | |
| GGAAGCTGTTGAATCTCTTT+CGG | + | chr4_2:43987846-43987865 | None:intergenic | 40.0% | |
| AAGAGATTCAACAGCTTCCT+TGG | - | chr4_2:43987847-43987866 | Msa0601380:intron | 40.0% | |
| ! | ATACACTCTTCCTGGCATTT+TGG | - | chr4_2:43987974-43987993 | Msa0601380:intron | 40.0% |
| ATTGTTGCGCTCGTAAATGT+TGG | - | chr4_2:43988023-43988042 | Msa0601380:CDS | 40.0% | |
| TATCTGTGGAAGACCATGAA+TGG | - | chr4_2:43988063-43988082 | Msa0601380:CDS | 40.0% | |
| GATGTCAGATACTACACTAG+AGG | + | chr4_2:43988291-43988310 | None:intergenic | 40.0% | |
| ! | CTGATCTTGTGGTTTTCTGT+AGG | - | chr4_2:43988347-43988366 | Msa0601380:CDS | 40.0% |
| ! | GATCTTGTGGTTTTCTGTAG+GGG | - | chr4_2:43988349-43988368 | Msa0601380:CDS | 40.0% |
| GAGGATGAATCAGATTACCA+GGG | + | chr4_2:43988406-43988425 | None:intergenic | 40.0% | |
| TGAGGATGAATCAGATTACC+AGG | + | chr4_2:43988407-43988426 | None:intergenic | 40.0% | |
| GGTAATCTGATTCATCCTCA+TGG | - | chr4_2:43988407-43988426 | Msa0601380:CDS | 40.0% | |
| AACTGATGGCACCAAATATC+AGG | + | chr4_2:43988940-43988959 | None:intergenic | 40.0% | |
| CCGAATCAAGACTAAATCCA+TGG | - | chr4_2:43989178-43989197 | Msa0601380:intron | 40.0% | |
| CACAGTTTGGAAGAGCTTTA+CGG | - | chr4_2:43989204-43989223 | Msa0601380:CDS | 40.0% | |
| ACAGTTTGGAAGAGCTTTAC+GGG | - | chr4_2:43989205-43989224 | Msa0601380:CDS | 40.0% | |
| AGAGGGTAGGTTGTTAGAAT+TGG | - | chr4_2:43989247-43989266 | Msa0601380:CDS | 40.0% | |
| GGTTGTTAGAATTGGAGATC+AGG | - | chr4_2:43989255-43989274 | Msa0601380:CDS | 40.0% | |
| GACCACTCCAAAGTGTAATT+TGG | - | chr4_2:43989361-43989380 | Msa0601380:five_prime_UTR | 40.0% | |
| AGAAGGAGAATGAGGTGATG+GGG | + | chr4_2:43984200-43984219 | None:intergenic | 45.0% | |
| GAGAAGGAGAATGAGGTGAT+GGG | + | chr4_2:43984201-43984220 | None:intergenic | 45.0% | |
| AGATGAGGAGAAGGAGAATG+AGG | + | chr4_2:43984208-43984227 | None:intergenic | 45.0% | |
| GAATGGTGAAGATGAGGAGA+AGG | + | chr4_2:43984217-43984236 | None:intergenic | 45.0% | |
| GTTGACCTGGGATTGTTGAA+GGG | + | chr4_2:43984326-43984345 | None:intergenic | 45.0% | |
| TGTTGACCTGGGATTGTTGA+AGG | + | chr4_2:43984327-43984346 | None:intergenic | 45.0% | |
| GGTGAAGAGAATTGTTGACC+TGG | + | chr4_2:43984339-43984358 | None:intergenic | 45.0% | |
| ! | AACTGACCTGGTTTGCAGAA+TGG | + | chr4_2:43984465-43984484 | None:intergenic | 45.0% |
| GAAACACAACACTGACACAC+CGG | - | chr4_2:43984501-43984520 | Msa0601380:three_prime_UTR | 45.0% | |
| !! | CTTCCATTTTGGGGGTTTGT+TGG | - | chr4_2:43984935-43984954 | Msa0601380:intron | 45.0% |
| TTGCCAACAAACCCCCAAAA+TGG | + | chr4_2:43984941-43984960 | None:intergenic | 45.0% | |
| ! | AATTTGATTCATGGTGGGGG+AGG | - | chr4_2:43984974-43984993 | Msa0601380:intron | 45.0% |
| TCGCGCTGTAGATATAACCA+AGG | - | chr4_2:43985087-43985106 | Msa0601380:intron | 45.0% | |
| CGCAAATGAAGAAGATAGGG+AGG | - | chr4_2:43985433-43985452 | Msa0601380:intron | 45.0% | |
| ! | AAGAAGATAGGGAGGTTGGT+TGG | - | chr4_2:43985441-43985460 | Msa0601380:intron | 45.0% |
| GTTGGTTGGAAGTCAATCCA+TGG | - | chr4_2:43985455-43985474 | Msa0601380:CDS | 45.0% | |
| GAGGCTTGAATACATCACCA+TGG | + | chr4_2:43985475-43985494 | None:intergenic | 45.0% | |
| GCAAAAAATAAGGACGGGTG+CGG | + | chr4_2:43985500-43985519 | None:intergenic | 45.0% | |
| ACAAGATAAGAGTGGGTGGT+AGG | - | chr4_2:43985855-43985874 | Msa0601380:CDS | 45.0% | |
| CAAGTAACAAAGTCTGGCAC+TGG | + | chr4_2:43986124-43986143 | None:intergenic | 45.0% | |
| CTTTCAACTTCTGTACTGCC+TGG | - | chr4_2:43986229-43986248 | Msa0601380:intron | 45.0% | |
| TTATCATTGCCCCCTAGACA+AGG | + | chr4_2:43986532-43986551 | None:intergenic | 45.0% | |
| ! | GTTTTTCTCATGTCCCTTGG+GGG | + | chr4_2:43986588-43986607 | None:intergenic | 45.0% |
| ATAGGAGGATACAAGGACTG+AGG | - | chr4_2:43986711-43986730 | Msa0601380:intron | 45.0% | |
| TAGGAGGATACAAGGACTGA+GGG | - | chr4_2:43986712-43986731 | Msa0601380:intron | 45.0% | |
| AGCAGTGACTCTGTTGTAGA+AGG | - | chr4_2:43986768-43986787 | Msa0601380:intron | 45.0% | |
| GCAGTGACTCTGTTGTAGAA+GGG | - | chr4_2:43986769-43986788 | Msa0601380:intron | 45.0% | |
| CAGTGACTCTGTTGTAGAAG+GGG | - | chr4_2:43986770-43986789 | Msa0601380:intron | 45.0% | |
| GTTGTAGAAGGGGAAATCCT+TGG | - | chr4_2:43986780-43986799 | Msa0601380:intron | 45.0% | |
| ! | GAATTGGGCTAGATGTACCT+TGG | + | chr4_2:43986880-43986899 | None:intergenic | 45.0% |
| !! | AAGTGCTGTGGAAAAGTGCT+GGG | - | chr4_2:43986919-43986938 | Msa0601380:intron | 45.0% |
| !!! | GTGGAAAAGTGCTGGGTTTT+TGG | - | chr4_2:43986926-43986945 | Msa0601380:intron | 45.0% |
| ! | AGCAGAAAAGTGCAGATCGA+AGG | - | chr4_2:43986956-43986975 | Msa0601380:intron | 45.0% |
| ! | GCAGAAAAGTGCAGATCGAA+GGG | - | chr4_2:43986957-43986976 | Msa0601380:intron | 45.0% |
| ! | CAGAAAAGTGCAGATCGAAG+GGG | - | chr4_2:43986958-43986977 | Msa0601380:intron | 45.0% |
| ! | AGAAAAGTGCAGATCGAAGG+GGG | - | chr4_2:43986959-43986978 | Msa0601380:intron | 45.0% |
| ! | TAGAGCAGGTGGTTAGTTAC+AGG | - | chr4_2:43987073-43987092 | Msa0601380:intron | 45.0% |
| AGGATACAAGGATAGAGGGA+AGG | - | chr4_2:43987114-43987133 | Msa0601380:intron | 45.0% | |
| GTTGTAGAGGAGGAAACTCT+TGG | - | chr4_2:43987180-43987199 | Msa0601380:intron | 45.0% | |
| TGTAGAGGAGGAAACTCTTG+GGG | - | chr4_2:43987182-43987201 | Msa0601380:intron | 45.0% | |
| !! | AGAGGGTACCGATAATTGCT+AGG | + | chr4_2:43987381-43987400 | None:intergenic | 45.0% |
| ACCCTCTATCCATACAGTCA+TGG | - | chr4_2:43987394-43987413 | Msa0601380:intron | 45.0% | |
| CACCATGACTGTATGGATAG+AGG | + | chr4_2:43987399-43987418 | None:intergenic | 45.0% | |
| CTCTATCCATACAGTCATGG+TGG | - | chr4_2:43987397-43987416 | Msa0601380:intron | 45.0% | |
| GAATAGAAGGACAAGCCAAC+TGG | + | chr4_2:43987428-43987447 | None:intergenic | 45.0% | |
| TACTCAACAGCATCCTTCCA+TGG | - | chr4_2:43987472-43987491 | Msa0601380:intron | 45.0% | |
| CATTCTCAGCAAATTGGCCA+TGG | + | chr4_2:43987492-43987511 | None:intergenic | 45.0% | |
| !! | CATGGCCAATTTGCTGAGAA+TGG | - | chr4_2:43987490-43987509 | Msa0601380:intron | 45.0% |
| !! | GCCAATTTGCTGAGAATGGA+TGG | - | chr4_2:43987494-43987513 | Msa0601380:intron | 45.0% |
| CCCATCCATTCTCAGCAAAT+TGG | + | chr4_2:43987498-43987517 | None:intergenic | 45.0% | |
| TCTGTCTTGACTATGACTCC+AGG | - | chr4_2:43987587-43987606 | Msa0601380:intron | 45.0% | |
| CTAGACTAACACTCTTCTCC+TGG | + | chr4_2:43987608-43987627 | None:intergenic | 45.0% | |
| !! | GAGAAGAGTGTTAGTCTAGC+TGG | - | chr4_2:43987609-43987628 | Msa0601380:intron | 45.0% |
| ATATCTTACAGGGTCACAGC+TGG | - | chr4_2:43987687-43987706 | Msa0601380:intron | 45.0% | |
| CGATCCCATTACTTGCATTC+GGG | - | chr4_2:43987760-43987779 | Msa0601380:intron | 45.0% | |
| GATCCCATTACTTGCATTCG+GGG | - | chr4_2:43987761-43987780 | Msa0601380:intron | 45.0% | |
| ATCCCATTACTTGCATTCGG+GGG | - | chr4_2:43987762-43987781 | Msa0601380:intron | 45.0% | |
| TCGGGGGAGTAATTGGATAT+CGG | - | chr4_2:43987778-43987797 | Msa0601380:intron | 45.0% | |
| TCGGTTTAGGTCCAAGTTTC+AGG | - | chr4_2:43987797-43987816 | Msa0601380:intron | 45.0% | |
| CGGATATCTCTTTGTACCCA+AGG | + | chr4_2:43987826-43987845 | None:intergenic | 45.0% | |
| TTCAACAGCTTCCTTGGTAC+AGG | - | chr4_2:43987853-43987872 | Msa0601380:intron | 45.0% | |
| AATGGTGTTCTCCTGTACCA+AGG | + | chr4_2:43987867-43987886 | None:intergenic | 45.0% | |
| TAGCGTACACCTGGTGTAAT+TGG | + | chr4_2:43987935-43987954 | None:intergenic | 45.0% | |
| GAGCGCAACAATCACAATGA+CGG | + | chr4_2:43988015-43988034 | None:intergenic | 45.0% | |
| TACTTCTCCTGAGATCAGGA+GGG | + | chr4_2:43988381-43988400 | None:intergenic | 45.0% | |
| TTACTTCTCCTGAGATCAGG+AGG | + | chr4_2:43988382-43988401 | None:intergenic | 45.0% | |
| GAAAAGAGAACACAGTGCAG+AGG | + | chr4_2:43988623-43988642 | None:intergenic | 45.0% | |
| CGCACTGTAGCCAATAAAGA+AGG | + | chr4_2:43988897-43988916 | None:intergenic | 45.0% | |
| AAATCCATGGCTGCACAGTT+TGG | - | chr4_2:43989191-43989210 | Msa0601380:intron | 45.0% | |
| GAAGAGCTTTACGGGAAGAA+AGG | - | chr4_2:43989213-43989232 | Msa0601380:CDS | 45.0% | |
| GGAGTGGAATTATAGAGGGT+AGG | - | chr4_2:43989234-43989253 | Msa0601380:CDS | 45.0% | |
| GGTGAATTAATTAAGCCCCC+TGG | - | chr4_2:43989276-43989295 | Msa0601380:CDS | 45.0% | |
| CAACCTCATAAACAACCAGG+GGG | + | chr4_2:43989294-43989313 | None:intergenic | 45.0% | |
| GCAACCTCATAAACAACCAG+GGG | + | chr4_2:43989295-43989314 | None:intergenic | 45.0% | |
| GGCAACCTCATAAACAACCA+GGG | + | chr4_2:43989296-43989315 | None:intergenic | 45.0% | |
| TGGCAACCTCATAAACAACC+AGG | + | chr4_2:43989297-43989316 | None:intergenic | 45.0% | |
| GGTCATTAGACACACGATTG+AGG | + | chr4_2:43989345-43989364 | None:intergenic | 45.0% | |
| !!! | AAGTTTTTTTTTTTTTTTTT+TGG | + | chr4_2:43985978-43985997 | None:intergenic | 5.0% |
| GGAGAAGGAGAATGAGGTGA+TGG | + | chr4_2:43984202-43984221 | None:intergenic | 50.0% | |
| TAGGTCCCTTCAACAATCCC+AGG | - | chr4_2:43984318-43984337 | Msa0601380:three_prime_UTR | 50.0% | |
| AAAAATAAGGACGGGTGCGG+AGG | + | chr4_2:43985497-43985516 | None:intergenic | 50.0% | |
| ACTGCCTGGTATCTTTGCCA+TGG | - | chr4_2:43986243-43986262 | Msa0601380:intron | 50.0% | |
| GACAAGGACGACACGCAATT+GGG | + | chr4_2:43986516-43986535 | None:intergenic | 50.0% | |
| AGACAAGGACGACACGCAAT+TGG | + | chr4_2:43986517-43986536 | None:intergenic | 50.0% | |
| ATTGCGTGTCGTCCTTGTCT+AGG | - | chr4_2:43986517-43986536 | Msa0601380:intron | 50.0% | |
| TTGCGTGTCGTCCTTGTCTA+GGG | - | chr4_2:43986518-43986537 | Msa0601380:intron | 50.0% | |
| ! | TTGGTTGGTTAGTCGGTCAG+AGG | - | chr4_2:43986675-43986694 | Msa0601380:intron | 50.0% |
| GAAGGGGAAATCCTTGGAGT+TGG | - | chr4_2:43986786-43986805 | Msa0601380:intron | 50.0% | |
| !! | TCCTTGGAGTTGGTATCTGC+TGG | - | chr4_2:43986796-43986815 | Msa0601380:intron | 50.0% |
| TCCAGCAGATACCAACTCCA+AGG | + | chr4_2:43986800-43986819 | None:intergenic | 50.0% | |
| ATCTGCTGGAGTCGAGAACA+AGG | - | chr4_2:43986810-43986829 | Msa0601380:intron | 50.0% | |
| TCTGCTGGAGTCGAGAACAA+GGG | - | chr4_2:43986811-43986830 | Msa0601380:intron | 50.0% | |
| GGGTTAGGCCCAATGAACTT+TGG | + | chr4_2:43986859-43986878 | None:intergenic | 50.0% | |
| AGTTCATTGGGCCTAACCCA+AGG | - | chr4_2:43986860-43986879 | Msa0601380:intron | 50.0% | |
| GGCTAGATGTACCTTGGGTT+AGG | + | chr4_2:43986874-43986893 | None:intergenic | 50.0% | |
| !! | GGGTTTTTGCTCAAGTGCTG+TGG | - | chr4_2:43986907-43986926 | Msa0601380:intron | 50.0% |
| ! | CAAGTGCTGTGGAAAAGTGC+TGG | - | chr4_2:43986918-43986937 | Msa0601380:intron | 50.0% |
| GCAGTGTGACTCTGTTGTAG+AGG | - | chr4_2:43987167-43987186 | Msa0601380:intron | 50.0% | |
| GTGTGACTCTGTTGTAGAGG+AGG | - | chr4_2:43987170-43987189 | Msa0601380:intron | 50.0% | |
| GAGAGTCCACCATGACTGTA+TGG | + | chr4_2:43987406-43987425 | None:intergenic | 50.0% | |
| CTCAGCAAATTGGCCATGGA+AGG | + | chr4_2:43987488-43987507 | None:intergenic | 50.0% | |
| CTCCCCCGAATGCAAGTAAT+GGG | + | chr4_2:43987767-43987786 | None:intergenic | 50.0% | |
| ACTCCCCCGAATGCAAGTAA+TGG | + | chr4_2:43987768-43987787 | None:intergenic | 50.0% | |
| CTTGCATTCGGGGGAGTAAT+TGG | - | chr4_2:43987771-43987790 | Msa0601380:intron | 50.0% | |
| ! | TCCAAGTTTCAGGTCCCCTT+GGG | - | chr4_2:43987807-43987826 | Msa0601380:intron | 50.0% |
| ! | ACCAGGTGTACGCTAGTTTG+TGG | - | chr4_2:43987940-43987959 | Msa0601380:intron | 50.0% |
| ! | CCAGGTGTACGCTAGTTTGT+GGG | - | chr4_2:43987941-43987960 | Msa0601380:intron | 50.0% |
| ! | CAGGTGTACGCTAGTTTGTG+GGG | - | chr4_2:43987942-43987961 | Msa0601380:intron | 50.0% |
| CTGTGGAAGACCATGAATGG+TGG | - | chr4_2:43988066-43988085 | Msa0601380:CDS | 50.0% | |
| TGGAAGACCATGAATGGTGG+TGG | - | chr4_2:43988069-43988088 | Msa0601380:CDS | 50.0% | |
| !! | AAGACCATGAATGGTGGTGG+AGG | - | chr4_2:43988072-43988091 | Msa0601380:CDS | 50.0% |
| CATACCTCCACCACCATTCA+TGG | + | chr4_2:43988079-43988098 | None:intergenic | 50.0% | |
| GTCTTAACCCTCCTGATCTC+AGG | - | chr4_2:43988371-43988390 | Msa0601380:CDS | 50.0% | |
| GGCTTACTTCTCCTGAGATC+AGG | + | chr4_2:43988385-43988404 | None:intergenic | 50.0% | |
| ATCTCAGGAGAAGTAAGCCC+TGG | - | chr4_2:43988386-43988405 | Msa0601380:CDS | 50.0% | |
| ACACAGTGCAGAGGTCAACA+AGG | + | chr4_2:43988614-43988633 | None:intergenic | 50.0% | |
| TCTTCCAAACTGTGCAGCCA+TGG | + | chr4_2:43989198-43989217 | None:intergenic | 50.0% | |
| GCTTTACGGGAAGAAAGGAG+TGG | - | chr4_2:43989218-43989237 | Msa0601380:CDS | 50.0% | |
| AAGCCCCCTGGTTGTTTATG+AGG | - | chr4_2:43989288-43989307 | Msa0601380:CDS | 50.0% | |
| TGCGTGTCGTCCTTGTCTAG+GGG | - | chr4_2:43986519-43986538 | Msa0601380:intron | 55.0% | |
| !! | GGATCGAGGGAAGGCATTGA+AGG | - | chr4_2:43987000-43987019 | Msa0601380:intron | 55.0% |
| GAGGAGGAAACTCTTGGGGT+TGG | - | chr4_2:43987186-43987205 | Msa0601380:intron | 55.0% | |
| GAGGAAACTCTTGGGGTTGG+AGG | - | chr4_2:43987189-43987208 | Msa0601380:intron | 55.0% | |
| !! | GTCATGGTGGACTCTCCAGT+TGG | - | chr4_2:43987410-43987429 | Msa0601380:intron | 55.0% |
| GTCACAGCTGGACTCCCATT+GGG | - | chr4_2:43987699-43987718 | Msa0601380:intron | 55.0% | |
| ! | GTCCAAGTTTCAGGTCCCCT+TGG | - | chr4_2:43987806-43987825 | Msa0601380:intron | 55.0% |
| ACCCAAGGGGACCTGAAACT+TGG | + | chr4_2:43987811-43987830 | None:intergenic | 55.0% | |
| CCCACAAACTAGCGTACACC+TGG | + | chr4_2:43987944-43987963 | None:intergenic | 55.0% | |
| AGTGTCGCAGCCAAAATGCC+AGG | + | chr4_2:43987987-43988006 | None:intergenic | 55.0% | |
| GTGTGCAGATCTGTGCTGTG+TGG | - | chr4_2:43988791-43988810 | Msa0601380:CDS | 55.0% | |
| TGCAGATCTGTGCTGTGTGG+TGG | - | chr4_2:43988794-43988813 | Msa0601380:CDS | 55.0% | |
| AATAAGGACGGGTGCGGAGG+AGG | + | chr4_2:43985494-43985513 | None:intergenic | 60.0% | |
| GCGTGTCGTCCTTGTCTAGG+GGG | - | chr4_2:43986520-43986539 | Msa0601380:intron | 60.0% | |
| GGTCACAGCTGGACTCCCAT+TGG | - | chr4_2:43987698-43987717 | Msa0601380:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 43984007 | 43989536 | 43984007 | ID=Msa0601380;Name=Msa0601380 |
| chr4_2 | mRNA | 43984007 | 43989536 | 43984007 | ID=Msa0601380-mRNA-1;Parent=Msa0601380;Name=Msa0601380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=161|0.83|0.85|1|0.66|0.57|7|521|581 |
| chr4_2 | exon | 43984007 | 43984744 | 43984007 | ID=Msa0601380-mRNA-1:exon:9647;Parent=Msa0601380-mRNA-1 |
| chr4_2 | exon | 43985450 | 43985934 | 43985450 | ID=Msa0601380-mRNA-1:exon:9646;Parent=Msa0601380-mRNA-1 |
| chr4_2 | exon | 43986027 | 43986183 | 43986027 | ID=Msa0601380-mRNA-1:exon:9645;Parent=Msa0601380-mRNA-1 |
| chr4_2 | exon | 43987991 | 43988119 | 43987991 | ID=Msa0601380-mRNA-1:exon:9644;Parent=Msa0601380-mRNA-1 |
| chr4_2 | exon | 43988217 | 43988822 | 43988217 | ID=Msa0601380-mRNA-1:exon:9643;Parent=Msa0601380-mRNA-1 |
| chr4_2 | exon | 43989204 | 43989391 | 43989204 | ID=Msa0601380-mRNA-1:exon:9642;Parent=Msa0601380-mRNA-1 |
| chr4_2 | exon | 43989412 | 43989536 | 43989412 | ID=Msa0601380-mRNA-1:exon:9641;Parent=Msa0601380-mRNA-1 |
| chr4_2 | five_prime_UTR | 43989412 | 43989536 | 43989412 | ID=Msa0601380-mRNA-1:five_prime_utr;Parent=Msa0601380-mRNA-1 |
| chr4_2 | five_prime_UTR | 43989356 | 43989391 | 43989356 | ID=Msa0601380-mRNA-1:five_prime_utr;Parent=Msa0601380-mRNA-1 |
| chr4_2 | CDS | 43989204 | 43989355 | 43989204 | ID=Msa0601380-mRNA-1:cds;Parent=Msa0601380-mRNA-1 |
| chr4_2 | CDS | 43988217 | 43988822 | 43988217 | ID=Msa0601380-mRNA-1:cds;Parent=Msa0601380-mRNA-1 |
| chr4_2 | CDS | 43987991 | 43988119 | 43987991 | ID=Msa0601380-mRNA-1:cds;Parent=Msa0601380-mRNA-1 |
| chr4_2 | CDS | 43986027 | 43986183 | 43986027 | ID=Msa0601380-mRNA-1:cds;Parent=Msa0601380-mRNA-1 |
| chr4_2 | CDS | 43985450 | 43985934 | 43985450 | ID=Msa0601380-mRNA-1:cds;Parent=Msa0601380-mRNA-1 |
| chr4_2 | CDS | 43984528 | 43984744 | 43984528 | ID=Msa0601380-mRNA-1:cds;Parent=Msa0601380-mRNA-1 |
| chr4_2 | three_prime_UTR | 43984007 | 43984527 | 43984007 | ID=Msa0601380-mRNA-1:three_prime_utr;Parent=Msa0601380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
