Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0452770 | XP_003599946.1 | 84.788 | 401 | 6 | 4 | 1 | 346 | 1 | 401 | 0.0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0452770 | sp|Q94B38|GPT2_ARATH | 69.945 | 366 | 42 | 6 | 30 | 346 | 42 | 388 | 1.32e-161 | 460 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0452770 | G7J1A0 | 84.788 | 401 | 6 | 4 | 1 | 346 | 1 | 401 | 0.0 | 632 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009530 | Msa0452770 | -0.817471 | 3.241123e-52 | -8.615850e-47 |
| Msa0009560 | Msa0452770 | -0.816864 | 4.438566e-52 | -8.615850e-47 |
| Msa0011060 | Msa0452770 | -0.813623 | 2.330894e-51 | -8.615850e-47 |
| Msa0011100 | Msa0452770 | -0.804596 | 2.002814e-49 | -8.615850e-47 |
| Msa0017710 | Msa0452770 | 0.839931 | 1.179561e-57 | -8.615850e-47 |
| Msa0024650 | Msa0452770 | 0.800029 | 1.745530e-48 | -8.615850e-47 |
| Msa0025570 | Msa0452770 | 0.821189 | 4.608739e-53 | -8.615850e-47 |
| Msa0033190 | Msa0452770 | -0.807326 | 5.339335e-50 | -8.615850e-47 |
| Msa0034100 | Msa0452770 | -0.832734 | 7.982558e-56 | -8.615850e-47 |
| Msa0037180 | Msa0452770 | 0.813787 | 2.144983e-51 | -8.615850e-47 |
| Msa0043120 | Msa0452770 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
| Msa0043150 | Msa0452770 | 0.817760 | 2.789484e-52 | -8.615850e-47 |
| Msa0046430 | Msa0452770 | 0.817358 | 3.436910e-52 | -8.615850e-47 |
| Msa0048380 | Msa0452770 | 0.805040 | 1.616926e-49 | -8.615850e-47 |
| Msa0048410 | Msa0452770 | -0.802593 | 5.212612e-49 | -8.615850e-47 |
| Msa0050320 | Msa0452770 | -0.807627 | 4.609139e-50 | -8.615850e-47 |
| Msa0054790 | Msa0452770 | 0.806727 | 7.147706e-50 | -8.615850e-47 |
| Msa0073110 | Msa0452770 | 0.832040 | 1.186227e-55 | -8.615850e-47 |
| Msa0079840 | Msa0452770 | -0.808953 | 2.403854e-50 | -8.615850e-47 |
| Msa0081290 | Msa0452770 | -0.814817 | 1.269948e-51 | -8.615850e-47 |
| Msa0084190 | Msa0452770 | 0.806151 | 9.452994e-50 | -8.615850e-47 |
| Msa0092220 | Msa0452770 | 0.830701 | 2.531777e-55 | -8.615850e-47 |
| Msa0101530 | Msa0452770 | 0.813566 | 2.398504e-51 | -8.615850e-47 |
| Msa0105590 | Msa0452770 | -0.813011 | 3.175682e-51 | -8.615850e-47 |
| Msa0110240 | Msa0452770 | 0.825338 | 4.950650e-54 | -8.615850e-47 |
| Msa0120320 | Msa0452770 | -0.801928 | 7.144298e-49 | -8.615850e-47 |
| Msa0120450 | Msa0452770 | 0.809483 | 1.850516e-50 | -8.615850e-47 |
| Msa0121320 | Msa0452770 | 0.825933 | 3.577061e-54 | -8.615850e-47 |
| Msa0121480 | Msa0452770 | -0.800211 | 1.602957e-48 | -8.615850e-47 |
| Msa0128110 | Msa0452770 | -0.815922 | 7.213490e-52 | -8.615850e-47 |
| Msa0128340 | Msa0452770 | 0.828979 | 6.653304e-55 | -8.615850e-47 |
| Msa0128740 | Msa0452770 | 0.827479 | 1.529287e-54 | -8.615850e-47 |
| Msa0132080 | Msa0452770 | -0.824602 | 7.386120e-54 | -8.615850e-47 |
| Msa0137760 | Msa0452770 | 0.813677 | 2.267250e-51 | -8.615850e-47 |
| Msa0139910 | Msa0452770 | 0.837360 | 5.442468e-57 | -8.615850e-47 |
| Msa0140870 | Msa0452770 | -0.801093 | 1.059513e-48 | -8.615850e-47 |
| Msa0141410 | Msa0452770 | 0.800118 | 1.674186e-48 | -8.615850e-47 |
| Msa0154720 | Msa0452770 | -0.806394 | 8.403387e-50 | -8.615850e-47 |
| Msa0156530 | Msa0452770 | 0.820770 | 5.753437e-53 | -8.615850e-47 |
| Msa0166180 | Msa0452770 | 0.842495 | 2.497725e-58 | -8.615850e-47 |
| Msa0173600 | Msa0452770 | -0.801657 | 8.119870e-49 | -8.615850e-47 |
| Msa0174590 | Msa0452770 | 0.810296 | 1.237215e-50 | -8.615850e-47 |
| Msa0189150 | Msa0452770 | -0.815536 | 8.791052e-52 | -8.615850e-47 |
| Msa0190670 | Msa0452770 | 0.808786 | 2.609661e-50 | -8.615850e-47 |
| Msa0190890 | Msa0452770 | 0.845347 | 4.299010e-59 | -8.615850e-47 |
| Msa0194750 | Msa0452770 | -0.805639 | 1.211170e-49 | -8.615850e-47 |
| Msa0196260 | Msa0452770 | 0.809117 | 2.217463e-50 | -8.615850e-47 |
| Msa0209370 | Msa0452770 | -0.807802 | 4.230275e-50 | -8.615850e-47 |
| Msa0211460 | Msa0452770 | 0.819142 | 1.356480e-52 | -8.615850e-47 |
| Msa0216150 | Msa0452770 | -0.801578 | 8.429888e-49 | -8.615850e-47 |
| Msa0225070 | Msa0452770 | -0.841784 | 3.850327e-58 | -8.615850e-47 |
| Msa0225920 | Msa0452770 | 0.820025 | 8.529429e-53 | -8.615850e-47 |
| Msa0229350 | Msa0452770 | -0.813212 | 2.869201e-51 | -8.615850e-47 |
| Msa0233210 | Msa0452770 | 0.821165 | 4.667957e-53 | -8.615850e-47 |
| Msa0234130 | Msa0452770 | 0.825287 | 5.088940e-54 | -8.615850e-47 |
| Msa0236690 | Msa0452770 | -0.816597 | 5.095668e-52 | -8.615850e-47 |
| Msa0238110 | Msa0452770 | 0.810407 | 1.170677e-50 | -8.615850e-47 |
| Msa0238140 | Msa0452770 | 0.830960 | 2.188305e-55 | -8.615850e-47 |
| Msa0373550 | Msa0452770 | 0.830221 | 3.317304e-55 | -8.615850e-47 |
| Msa0375500 | Msa0452770 | 0.811335 | 7.372308e-51 | -8.615850e-47 |
| Msa0375570 | Msa0452770 | -0.808475 | 3.041299e-50 | -8.615850e-47 |
| Msa0379480 | Msa0452770 | 0.843496 | 1.352268e-58 | -8.615850e-47 |
| Msa0380590 | Msa0452770 | 0.812433 | 4.250499e-51 | -8.615850e-47 |
| Msa0386880 | Msa0452770 | 0.819176 | 1.332519e-52 | -8.615850e-47 |
| Msa0389570 | Msa0452770 | -0.812827 | 3.485051e-51 | -8.615850e-47 |
| Msa0390590 | Msa0452770 | -0.801283 | 9.687212e-49 | -8.615850e-47 |
| Msa0396800 | Msa0452770 | 0.816222 | 6.180887e-52 | -8.615850e-47 |
| Msa0396860 | Msa0452770 | 0.804048 | 2.604249e-49 | -8.615850e-47 |
| Msa0397130 | Msa0452770 | 0.889047 | 3.435450e-73 | -8.615850e-47 |
| Msa0401500 | Msa0452770 | 0.801826 | 7.496543e-49 | -8.615850e-47 |
| Msa0403740 | Msa0452770 | -0.821383 | 4.156669e-53 | -8.615850e-47 |
| Msa0422230 | Msa0452770 | -0.805191 | 1.503812e-49 | -8.615850e-47 |
| Msa0425950 | Msa0452770 | 0.812738 | 3.645700e-51 | -8.615850e-47 |
| Msa0426030 | Msa0452770 | 0.808988 | 2.362392e-50 | -8.615850e-47 |
| Msa0426170 | Msa0452770 | 0.814053 | 1.874302e-51 | -8.615850e-47 |
| Msa0427260 | Msa0452770 | -0.817311 | 3.522788e-52 | -8.615850e-47 |
| Msa0434820 | Msa0452770 | -0.815230 | 1.028447e-51 | -8.615850e-47 |
| Msa0444210 | Msa0452770 | 0.813245 | 2.821663e-51 | -8.615850e-47 |
| Msa0447830 | Msa0452770 | -0.810896 | 9.176227e-51 | -8.615850e-47 |
| Msa0452770 | Msa0456450 | -0.832622 | 8.511169e-56 | -8.615850e-47 |
| Msa0452770 | Msa0457070 | -0.818153 | 2.274020e-52 | -8.615850e-47 |
| Msa0452770 | Msa0468660 | 0.809728 | 1.639696e-50 | -8.615850e-47 |
| Msa0452770 | Msa0470420 | 0.802292 | 6.012174e-49 | -8.615850e-47 |
| Msa0452770 | Msa0471130 | -0.801591 | 8.378247e-49 | -8.615850e-47 |
| Msa0452770 | Msa0471210 | 0.810289 | 1.241072e-50 | -8.615850e-47 |
| Msa0452770 | Msa0471390 | 0.825971 | 3.504120e-54 | -8.615850e-47 |
| Msa0452770 | Msa0472390 | 0.830383 | 3.029313e-55 | -8.615850e-47 |
| Msa0452770 | Msa0478730 | -0.807423 | 5.092024e-50 | -8.615850e-47 |
| Msa0452770 | Msa0481670 | 0.805638 | 1.212056e-49 | -8.615850e-47 |
| Msa0452770 | Msa0491780 | 0.808205 | 3.471808e-50 | -8.615850e-47 |
| Msa0452770 | Msa0491960 | 0.826032 | 3.389564e-54 | -8.615850e-47 |
| Msa0452770 | Msa0500420 | 0.816350 | 5.787210e-52 | -8.615850e-47 |
| Msa0452770 | Msa0501080 | 0.812082 | 5.069664e-51 | -8.615850e-47 |
| Msa0452770 | Msa0514540 | 0.807523 | 4.847843e-50 | -8.615850e-47 |
| Msa0452770 | Msa0522810 | -0.800996 | 1.108856e-48 | -8.615850e-47 |
| Msa0452770 | Msa0528830 | -0.807477 | 4.959485e-50 | -8.615850e-47 |
| Msa0452770 | Msa0529360 | 0.842811 | 2.058603e-58 | -8.615850e-47 |
| Msa0452770 | Msa0538050 | -0.835666 | 1.469265e-56 | -8.615850e-47 |
| Msa0452770 | Msa0549960 | 0.806440 | 8.217289e-50 | -8.615850e-47 |
| Msa0452770 | Msa0563440 | 0.806861 | 6.696771e-50 | -8.615850e-47 |
| Msa0452770 | Msa0566460 | 0.820985 | 5.135216e-53 | -8.615850e-47 |
| Msa0452770 | Msa0566930 | 0.800015 | 1.756969e-48 | -8.615850e-47 |
| Msa0452770 | Msa0567330 | 0.811089 | 8.334353e-51 | -8.615850e-47 |
| Msa0452770 | Msa0569540 | -0.802541 | 5.342243e-49 | -8.615850e-47 |
| Msa0452770 | Msa0572730 | -0.810793 | 9.659702e-51 | -8.615850e-47 |
| Msa0452770 | Msa0576320 | 0.823143 | 1.622997e-53 | -8.615850e-47 |
| Msa0452770 | Msa0579170 | -0.810258 | 1.260632e-50 | -8.615850e-47 |
| Msa0452770 | Msa0579230 | -0.816967 | 4.208646e-52 | -8.615850e-47 |
| Msa0452770 | Msa0580210 | 0.806779 | 6.969352e-50 | -8.615850e-47 |
| Msa0452770 | Msa0583390 | 0.827299 | 1.688746e-54 | -8.615850e-47 |
| Msa0452770 | Msa0585720 | -0.833418 | 5.394816e-56 | -8.615850e-47 |
| Msa0452770 | Msa0591840 | -0.801895 | 7.255821e-49 | -8.615850e-47 |
| Msa0452770 | Msa0601380 | 0.801894 | 7.260145e-49 | -8.615850e-47 |
| Msa0452770 | Msa0606600 | 0.850029 | 2.211485e-60 | -8.615850e-47 |
| Msa0452770 | Msa0610240 | -0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0452770 | Msa0614020 | -0.805156 | 1.529591e-49 | -8.615850e-47 |
| Msa0452770 | Msa0624930 | 0.845844 | 3.152140e-59 | -8.615850e-47 |
| Msa0452770 | Msa0625900 | -0.826773 | 2.256804e-54 | -8.615850e-47 |
| Msa0452770 | Msa0632040 | -0.805653 | 1.203088e-49 | -8.615850e-47 |
| Msa0452770 | Msa0638300 | -0.817630 | 2.985067e-52 | -8.615850e-47 |
| Msa0452770 | Msa0643190 | 0.807375 | 5.211846e-50 | -8.615850e-47 |
| Msa0452770 | Msa0646430 | 0.802142 | 6.455773e-49 | -8.615850e-47 |
| Msa0452770 | Msa0647300 | 0.844289 | 8.290629e-59 | -8.615850e-47 |
| Msa0452770 | Msa0658120 | 0.826459 | 2.681166e-54 | -8.615850e-47 |
| Msa0452770 | Msa0659020 | -0.841478 | 4.636597e-58 | -8.615850e-47 |
| Msa0452770 | Msa0662670 | -0.810894 | 9.186665e-51 | -8.615850e-47 |
| Msa0452770 | Msa0663580 | -0.835253 | 1.868686e-56 | -8.615850e-47 |
| Msa0452770 | Msa0663690 | -0.826189 | 3.110170e-54 | -8.615850e-47 |
| Msa0452770 | Msa0671400 | 0.813605 | 2.351531e-51 | -8.615850e-47 |
| Msa0452770 | Msa0671640 | 0.811561 | 6.583696e-51 | -8.615850e-47 |
| Msa0452770 | Msa0685080 | 0.801193 | 1.010785e-48 | -8.615850e-47 |
| Msa0452770 | Msa0686830 | 0.842155 | 3.072187e-58 | -8.615850e-47 |
| Msa0452770 | Msa0688880 | -0.810264 | 1.256696e-50 | -8.615850e-47 |
| Msa0452770 | Msa0698110 | 0.815224 | 1.031442e-51 | -8.615850e-47 |
| Msa0452770 | Msa0702020 | -0.825956 | 3.533255e-54 | -8.615850e-47 |
| Msa0452770 | Msa0702690 | -0.810018 | 1.419935e-50 | -8.615850e-47 |
| Msa0452770 | Msa0702970 | 0.817754 | 2.799430e-52 | -8.615850e-47 |
| Msa0452770 | Msa0703430 | -0.805051 | 1.608603e-49 | -8.615850e-47 |
| Msa0452770 | Msa0705520 | 0.820035 | 8.484680e-53 | -8.615850e-47 |
| Msa0452770 | Msa0708680 | 0.834390 | 3.081675e-56 | -8.615850e-47 |
| Msa0452770 | Msa0708870 | -0.812997 | 3.198556e-51 | -8.615850e-47 |
| Msa0452770 | Msa0711260 | 0.825585 | 4.326742e-54 | -8.615850e-47 |
| Msa0452770 | Msa0716700 | 0.812926 | 3.315571e-51 | -8.615850e-47 |
| Msa0452770 | Msa0716980 | 0.816482 | 5.405726e-52 | -8.615850e-47 |
| Msa0452770 | Msa0717030 | 0.807234 | 5.584366e-50 | -8.615850e-47 |
| Msa0452770 | Msa0721930 | 0.828049 | 1.115766e-54 | -8.615850e-47 |
| Msa0452770 | Msa0732970 | 0.845251 | 4.564443e-59 | -8.615850e-47 |
| Msa0452770 | Msa0733240 | -0.800013 | 1.758443e-48 | -8.615850e-47 |
| Msa0452770 | Msa0738460 | -0.801547 | 8.550803e-49 | -8.615850e-47 |
| Msa0452770 | Msa0750490 | -0.817514 | 3.170844e-52 | -8.615850e-47 |
| Msa0452770 | Msa0751960 | 0.809919 | 1.491039e-50 | -8.615850e-47 |
| Msa0452770 | Msa0754750 | 0.807928 | 3.977479e-50 | -8.615850e-47 |
| Msa0452770 | Msa0758000 | 0.818850 | 1.580719e-52 | -8.615850e-47 |
| Msa0452770 | Msa0761830 | 0.821415 | 4.087993e-53 | -8.615850e-47 |
| Msa0452770 | Msa0762930 | 0.827796 | 1.283731e-54 | -8.615850e-47 |
| Msa0452770 | Msa0769910 | -0.816079 | 6.652722e-52 | -8.615850e-47 |
| Msa0452770 | Msa0773960 | 0.840306 | 9.414813e-58 | -8.615850e-47 |
| Msa0452770 | Msa0774360 | -0.819944 | 8.899550e-53 | -8.615850e-47 |
| Msa0452770 | Msa0792410 | 0.806376 | 8.477189e-50 | -8.615850e-47 |
| Msa0452770 | Msa0802950 | -0.801935 | 7.118803e-49 | -8.615850e-47 |
| Msa0452770 | Msa0803310 | 0.800227 | 1.590954e-48 | -8.615850e-47 |
| Msa0452770 | Msa0804170 | 0.818980 | 1.476856e-52 | -8.615850e-47 |
| Msa0452770 | Msa0806930 | 0.829305 | 5.546334e-55 | -8.615850e-47 |
| Msa0452770 | Msa0807100 | -0.802851 | 4.611336e-49 | -8.615850e-47 |
| Msa0452770 | Msa0807870 | -0.801424 | 9.063858e-49 | -8.615850e-47 |
| Msa0452770 | Msa0812020 | -0.810947 | 8.947560e-51 | -8.615850e-47 |
| Msa0452770 | Msa0814160 | 0.827205 | 1.779398e-54 | -8.615850e-47 |
| Msa0452770 | Msa0822740 | 0.820474 | 6.728068e-53 | -8.615850e-47 |
| Msa0452770 | Msa0823380 | 0.804876 | 1.749853e-49 | -8.615850e-47 |
| Msa0452770 | Msa0831890 | 0.838771 | 2.359700e-57 | -8.615850e-47 |
| Msa0452770 | Msa0842180 | 0.813950 | 1.974317e-51 | -8.615850e-47 |
| Msa0452770 | Msa0847140 | 0.804314 | 2.292554e-49 | -8.615850e-47 |
| Msa0452770 | Msa0848720 | -0.809677 | 1.681096e-50 | -8.615850e-47 |
| Msa0452770 | Msa0852090 | -0.816389 | 5.671963e-52 | -8.615850e-47 |
| Msa0452770 | Msa0861730 | 0.801118 | 1.046794e-48 | -8.615850e-47 |
| Msa0452770 | Msa0873880 | 0.809483 | 1.850158e-50 | -8.615850e-47 |
| Msa0452770 | Msa0884840 | -0.815323 | 9.803539e-52 | -8.615850e-47 |
| Msa0452770 | Msa0898830 | -0.807063 | 6.070732e-50 | -8.615850e-47 |
| Msa0452770 | Msa0900830 | 0.818269 | 2.140791e-52 | -8.615850e-47 |
| Msa0452770 | Msa0903460 | -0.800958 | 1.129104e-48 | -8.615850e-47 |
| Msa0452770 | Msa0906100 | -0.802437 | 5.611496e-49 | -8.615850e-47 |
| Msa0452770 | Msa0907840 | 0.812884 | 3.385690e-51 | -8.615850e-47 |
| Msa0452770 | Msa0917630 | -0.812344 | 4.444450e-51 | -8.615850e-47 |
| Msa0452770 | Msa0921860 | 0.819971 | 8.776434e-53 | -8.615850e-47 |
| Msa0452770 | Msa0925630 | -0.834616 | 2.704468e-56 | -8.615850e-47 |
| Msa0452770 | Msa0928060 | -0.806555 | 7.771508e-50 | -8.615850e-47 |
| Msa0452770 | Msa0931550 | -0.822694 | 2.065804e-53 | -8.615850e-47 |
| Msa0452770 | Msa0932140 | 0.820808 | 5.640977e-53 | -8.615850e-47 |
| Msa0452770 | Msa0932150 | 0.821068 | 4.913590e-53 | -8.615850e-47 |
| Msa0452770 | Msa0965950 | 0.803010 | 4.274424e-49 | -8.615850e-47 |
| Msa0452770 | Msa0967900 | -0.835497 | 1.621414e-56 | -8.615850e-47 |
| Msa0452770 | Msa0970100 | 0.800319 | 1.523627e-48 | -8.615850e-47 |
| Msa0452770 | Msa0970270 | 0.800931 | 1.143404e-48 | -8.615850e-47 |
| Msa0452770 | Msa0975440 | -0.804039 | 2.615401e-49 | -8.615850e-47 |
| Msa0452770 | Msa0975950 | 0.801079 | 1.066499e-48 | -8.615850e-47 |
| Msa0452770 | Msa0987670 | 0.814167 | 1.768570e-51 | -8.615850e-47 |
| Msa0452770 | Msa0998660 | -0.827616 | 1.418212e-54 | -8.615850e-47 |
| Msa0452770 | Msa1002820 | 0.816412 | 5.604251e-52 | -8.615850e-47 |
| Msa0452770 | Msa1004300 | -0.806901 | 6.566661e-50 | -8.615850e-47 |
| Msa0452770 | Msa1006170 | 0.822361 | 2.467879e-53 | -8.615850e-47 |
| Msa0452770 | Msa1024420 | 0.805521 | 1.282238e-49 | -8.615850e-47 |
| Msa0452770 | Msa1024570 | 0.822482 | 2.313614e-53 | -8.615850e-47 |
| Msa0452770 | Msa1025440 | -0.809960 | 1.461494e-50 | -8.615850e-47 |
| Msa0452770 | Msa1026490 | 0.810568 | 1.080241e-50 | -8.615850e-47 |
| Msa0452770 | Msa1029860 | 0.813368 | 2.651557e-51 | -8.615850e-47 |
| Msa0452770 | Msa1031530 | -0.812201 | 4.775602e-51 | -8.615850e-47 |
| Msa0452770 | Msa1036260 | -0.819401 | 1.184234e-52 | -8.615850e-47 |
| Msa0452770 | Msa1038230 | -0.817145 | 3.838990e-52 | -8.615850e-47 |
| Msa0452770 | Msa1041250 | 0.800540 | 1.373785e-48 | -8.615850e-47 |
| Msa0452770 | Msa1045870 | 0.824521 | 7.717598e-54 | -8.615850e-47 |
| Msa0452770 | Msa1045960 | 0.827129 | 1.854735e-54 | -8.615850e-47 |
| Msa0452770 | Msa1046880 | 0.837352 | 5.466772e-57 | -8.615850e-47 |
| Msa0452770 | Msa1047300 | 0.823656 | 1.231514e-53 | -8.615850e-47 |
| Msa0452770 | Msa1047340 | 0.825149 | 5.485908e-54 | -8.615850e-47 |
| Msa0452770 | Msa1049400 | 0.802368 | 5.798199e-49 | -8.615850e-47 |
| Msa0452770 | Msa1049810 | 0.806085 | 9.761489e-50 | -8.615850e-47 |
| Msa0452770 | Msa1052000 | 0.804434 | 2.164267e-49 | -8.615850e-47 |
| Msa0452770 | Msa1055520 | -0.814388 | 1.580003e-51 | -8.615850e-47 |
| Msa0452770 | Msa1056890 | 0.826222 | 3.053130e-54 | -8.615850e-47 |
| Msa0452770 | Msa1061780 | 0.801993 | 6.926366e-49 | -8.615850e-47 |
| Msa0452770 | Msa1063210 | 0.824262 | 8.877914e-54 | -8.615850e-47 |
| Msa0452770 | Msa1068730 | 0.811263 | 7.640735e-51 | -8.615850e-47 |
| Msa0452770 | Msa1070630 | -0.848317 | 6.619627e-60 | -8.615850e-47 |
| Msa0452770 | Msa1074560 | 0.819420 | 1.172477e-52 | -8.615850e-47 |
| Msa0452770 | Msa1078090 | 0.802789 | 4.748152e-49 | -8.615850e-47 |
| Msa0452770 | Msa1078590 | -0.813342 | 2.686721e-51 | -8.615850e-47 |
| Msa0452770 | Msa1078760 | -0.810836 | 9.455791e-51 | -8.615850e-47 |
| Msa0452770 | Msa1079820 | 0.802841 | 4.632038e-49 | -8.615850e-47 |
| Msa0452770 | Msa1084210 | -0.813244 | 2.823561e-51 | -8.615850e-47 |
| Msa0452770 | Msa1085560 | 0.801440 | 8.997055e-49 | -8.615850e-47 |
| Msa0452770 | Msa1087420 | 0.827749 | 1.317267e-54 | -8.615850e-47 |
| Msa0452770 | Msa1088400 | -0.812175 | 4.839568e-51 | -8.615850e-47 |
| Msa0452770 | Msa1090150 | 0.810695 | 1.014386e-50 | -8.615850e-47 |
| Msa0452770 | Msa1093190 | -0.824860 | 6.421137e-54 | -8.615850e-47 |
| Msa0452770 | Msa1107330 | 0.823491 | 1.346281e-53 | -8.615850e-47 |
| Msa0452770 | Msa1111650 | 0.832317 | 1.012715e-55 | -8.615850e-47 |
| Msa0452770 | Msa1112040 | 0.818729 | 1.683954e-52 | -8.615850e-47 |
| Msa0452770 | Msa1122710 | -0.806833 | 6.789706e-50 | -8.615850e-47 |
| Msa0452770 | Msa1123250 | 0.815530 | 8.820286e-52 | -8.615850e-47 |
| Msa0452770 | Msa1127880 | 0.823890 | 1.085495e-53 | -8.615850e-47 |
| Msa0452770 | Msa1128230 | -0.814634 | 1.393930e-51 | -8.615850e-47 |
| Msa0452770 | Msa1134420 | -0.808639 | 2.805180e-50 | -8.615850e-47 |
| Msa0452770 | Msa1143060 | -0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa0452770 | Msa1143490 | 0.861296 | 1.133335e-63 | -8.615850e-47 |
| Msa0452770 | Msa1146980 | 0.838054 | 3.611372e-57 | -8.615850e-47 |
| Msa0452770 | Msa1156240 | 0.802681 | 4.999852e-49 | -8.615850e-47 |
| Msa0452770 | Msa1158450 | -0.847180 | 1.361361e-59 | -8.615850e-47 |
| Msa0452770 | Msa1165880 | 0.841170 | 5.589746e-58 | -8.615850e-47 |
| Msa0452770 | Msa1170320 | 0.802142 | 6.454167e-49 | -8.615850e-47 |
| Msa0452770 | Msa1184680 | 0.836580 | 8.611239e-57 | -8.615850e-47 |
| Msa0452770 | Msa1186260 | 0.801477 | 8.841693e-49 | -8.615850e-47 |
| Msa0452770 | Msa1186340 | 0.823633 | 1.246936e-53 | -8.615850e-47 |
| Msa0452770 | Msa1188080 | 0.815071 | 1.115273e-51 | -8.615850e-47 |
| Msa0452770 | Msa1190350 | -0.805744 | 1.151482e-49 | -8.615850e-47 |
| Msa0452770 | Msa1191350 | 0.839694 | 1.359172e-57 | -8.615850e-47 |
| Msa0452770 | Msa1191530 | -0.819270 | 1.268495e-52 | -8.615850e-47 |
| Msa0452770 | Msa1202470 | 0.823195 | 1.578578e-53 | -8.615850e-47 |
| Msa0452770 | Msa1202710 | -0.802648 | 5.077444e-49 | -8.615850e-47 |
| Msa0452770 | Msa1205270 | -0.821964 | 3.050592e-53 | -8.615850e-47 |
| Msa0452770 | Msa1209990 | -0.813064 | 3.092923e-51 | -8.615850e-47 |
| Msa0452770 | Msa1211130 | 0.840083 | 1.076498e-57 | -8.615850e-47 |
| Msa0452770 | Msa1225890 | 0.828939 | 6.800874e-55 | -8.615850e-47 |
| Msa0452770 | Msa1228600 | -0.839960 | 1.159309e-57 | -8.615850e-47 |
| Msa0452770 | Msa1230560 | 0.860992 | 1.402688e-63 | -8.615850e-47 |
| Msa0452770 | Msa1238250 | 0.837569 | 4.809927e-57 | -8.615850e-47 |
| Msa0452770 | Msa1254910 | 0.821540 | 3.824409e-53 | -8.615850e-47 |
| Msa0452770 | Msa1255030 | -0.810467 | 1.136241e-50 | -8.615850e-47 |
| Msa0452770 | Msa1266120 | -0.802614 | 5.160120e-49 | -8.615850e-47 |
| Msa0452770 | Msa1267990 | 0.806591 | 7.636302e-50 | -8.615850e-47 |
| Msa0452770 | Msa1269530 | 0.803595 | 3.233870e-49 | -8.615850e-47 |
| Msa0452770 | Msa1286860 | -0.815447 | 9.200070e-52 | -8.615850e-47 |
| Msa0452770 | Msa1295210 | -0.800069 | 1.713221e-48 | -8.615850e-47 |
| Msa0452770 | Msa1297220 | -0.818524 | 1.874505e-52 | -8.615850e-47 |
| Msa0452770 | Msa1298480 | -0.813165 | 2.938097e-51 | -8.615850e-47 |
| Msa0452770 | Msa1304790 | 0.809366 | 1.960614e-50 | -8.615850e-47 |
| Msa0452770 | Msa1311370 | 0.829293 | 5.583369e-55 | -8.615850e-47 |
| Msa0452770 | Msa1313840 | 0.817082 | 3.966083e-52 | -8.615850e-47 |
| Msa0452770 | Msa1319030 | 0.829369 | 5.351586e-55 | -8.615850e-47 |
| Msa0452770 | Msa1319190 | 0.834870 | 2.334602e-56 | -8.615850e-47 |
| Msa0452770 | Msa1321970 | 0.809093 | 2.243241e-50 | -8.615850e-47 |
| Msa0452770 | Msa1322500 | 0.830571 | 2.724872e-55 | -8.615850e-47 |
| Msa0452770 | Msa1322980 | 0.810156 | 1.325977e-50 | -8.615850e-47 |
| Msa0452770 | Msa1323260 | -0.831195 | 1.915542e-55 | -8.615850e-47 |
| Msa0452770 | Msa1327690 | -0.826559 | 2.538560e-54 | -8.615850e-47 |
| Msa0452770 | Msa1338600 | -0.824530 | 7.678185e-54 | -8.615850e-47 |
| Msa0452770 | Msa1339200 | 0.810074 | 1.381097e-50 | -8.615850e-47 |
| Msa0452770 | Msa1342360 | -0.832870 | 7.385203e-56 | -8.615850e-47 |
| Msa0452770 | Msa1343450 | -0.835665 | 1.470344e-56 | -8.615850e-47 |
| Msa0452770 | Msa1343590 | 0.801263 | 9.778506e-49 | -8.615850e-47 |
| Msa0452770 | Msa1345390 | 0.813890 | 2.035841e-51 | -8.615850e-47 |
| Msa0452770 | Msa1350580 | -0.800094 | 1.692987e-48 | -8.615850e-47 |
| Msa0452770 | Msa1357840 | 0.804811 | 1.805908e-49 | -8.615850e-47 |
| Msa0452770 | Msa1361980 | 0.836496 | 9.043736e-57 | -8.615850e-47 |
| Msa0452770 | Msa1369220 | -0.805093 | 1.576717e-49 | -8.615850e-47 |
| Msa0452770 | Msa1377980 | -0.815141 | 1.076398e-51 | -8.615850e-47 |
| Msa0452770 | Msa1379940 | 0.806546 | 7.805337e-50 | -8.615850e-47 |
| Msa0452770 | Msa1380740 | 0.840122 | 1.051705e-57 | -8.615850e-47 |
| Msa0452770 | Msa1382100 | -0.803040 | 4.214520e-49 | -8.615850e-47 |
| Msa0452770 | Msa1384410 | -0.824825 | 6.544521e-54 | -8.615850e-47 |
| Msa0452770 | Msa1395050 | 0.819923 | 9.001721e-53 | -8.615850e-47 |
| Msa0452770 | Msa1400290 | -0.803870 | 2.836128e-49 | -8.615850e-47 |
| Msa0452770 | Msa1407810 | 0.800278 | 1.553598e-48 | -8.615850e-47 |
| Msa0452770 | Msa1408280 | -0.813461 | 2.530495e-51 | -8.615850e-47 |
| Msa0452770 | Msa1408860 | -0.800922 | 1.148204e-48 | -8.615850e-47 |
| Msa0452770 | Msa1412740 | -0.811976 | 5.347993e-51 | -8.615850e-47 |
| Msa0452770 | Msa1413020 | 0.820436 | 6.867711e-53 | -8.615850e-47 |
| Msa0452770 | Msa1417220 | 0.801119 | 1.046285e-48 | -8.615850e-47 |
| Msa0452770 | Msa1429810 | 0.814746 | 1.316516e-51 | -8.615850e-47 |
| Msa0452770 | Msa1434700 | 0.805109 | 1.564288e-49 | -8.615850e-47 |
| Msa0452770 | Msa1450630 | -0.810312 | 1.227175e-50 | -8.615850e-47 |
| Msa0452770 | Msa1451660 | 0.811880 | 5.611007e-51 | -8.615850e-47 |
| Msa0452770 | Msa1455360 | 0.802103 | 6.575395e-49 | -8.615850e-47 |
| Msa0452770 | Msa1457850 | 0.815725 | 7.978227e-52 | -8.615850e-47 |
| Msa0452770 | Msa1458270 | 0.807915 | 4.002599e-50 | -8.615850e-47 |
| Msa0452770 | Msa1459680 | -0.807961 | 3.914563e-50 | -8.615850e-47 |
| Msa0452770 | Msa1460530 | -0.815053 | 1.126022e-51 | -8.615850e-47 |
| Msa0452770 | Msa1461660 | 0.804936 | 1.700528e-49 | -8.615850e-47 |
| Msa0452770 | Msa1462610 | 0.807032 | 6.160865e-50 | -8.615850e-47 |
| Msa0452770 | Msa1462780 | 0.841220 | 5.421856e-58 | -8.615850e-47 |
| Msa0240590 | Msa0452770 | -0.817726 | 2.839536e-52 | -8.615850e-47 |
| Msa0248320 | Msa0452770 | 0.801130 | 1.041192e-48 | -8.615850e-47 |
| Msa0248410 | Msa0452770 | 0.802306 | 5.973772e-49 | -8.615850e-47 |
| Msa0251920 | Msa0452770 | 0.818109 | 2.326310e-52 | -8.615850e-47 |
| Msa0260980 | Msa0452770 | 0.810782 | 9.712283e-51 | -8.615850e-47 |
| Msa0266140 | Msa0452770 | -0.827650 | 1.391797e-54 | -8.615850e-47 |
| Msa0267450 | Msa0452770 | -0.803978 | 2.692874e-49 | -8.615850e-47 |
| Msa0267510 | Msa0452770 | -0.803229 | 3.851811e-49 | -8.615850e-47 |
| Msa0269430 | Msa0452770 | -0.807869 | 4.094865e-50 | -8.615850e-47 |
| Msa0269660 | Msa0452770 | -0.801947 | 7.080729e-49 | -8.615850e-47 |
| Msa0270730 | Msa0452770 | -0.806924 | 6.494575e-50 | -8.615850e-47 |
| Msa0278480 | Msa0452770 | 0.804041 | 2.613169e-49 | -8.615850e-47 |
| Msa0279810 | Msa0452770 | 0.800899 | 1.160817e-48 | -8.615850e-47 |
| Msa0281190 | Msa0452770 | 0.814663 | 1.373653e-51 | -8.615850e-47 |
| Msa0290420 | Msa0452770 | 0.820282 | 7.447982e-53 | -8.615850e-47 |
| Msa0290800 | Msa0452770 | 0.856281 | 3.576846e-62 | -8.615850e-47 |
| Msa0303900 | Msa0452770 | 0.807823 | 4.186845e-50 | -8.615850e-47 |
| Msa0303920 | Msa0452770 | 0.814973 | 1.172612e-51 | -8.615850e-47 |
| Msa0304060 | Msa0452770 | -0.838266 | 3.185626e-57 | -8.615850e-47 |
| Msa0307630 | Msa0452770 | 0.808496 | 3.009339e-50 | -8.615850e-47 |
| Msa0311540 | Msa0452770 | 0.831480 | 1.629637e-55 | -8.615850e-47 |
| Msa0318360 | Msa0452770 | 0.801608 | 8.310698e-49 | -8.615850e-47 |
| Msa0319220 | Msa0452770 | 0.803171 | 3.959475e-49 | -8.615850e-47 |
| Msa0328870 | Msa0452770 | 0.862867 | 3.739472e-64 | -8.615850e-47 |
| Msa0331070 | Msa0452770 | -0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0333770 | Msa0452770 | 0.819398 | 1.185740e-52 | -8.615850e-47 |
| Msa0343230 | Msa0452770 | -0.809005 | 2.343449e-50 | -8.615850e-47 |
| Msa0349910 | Msa0452770 | 0.824161 | 9.378390e-54 | -8.615850e-47 |
| Msa0349930 | Msa0452770 | 0.805594 | 1.238072e-49 | -8.615850e-47 |
| Msa0354600 | Msa0452770 | 0.806069 | 9.840196e-50 | -8.615850e-47 |
| Msa0354670 | Msa0452770 | 0.800062 | 1.718692e-48 | -8.615850e-47 |
| Msa0358470 | Msa0452770 | 0.941076 | 7.786533e-101 | -8.615850e-47 |
| Msa0364030 | Msa0452770 | -0.820589 | 6.332950e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0452770 | MtrunA17_Chr3g0097931 | 84.788 | 401 | 6 | 4 | 1 | 346 | 1 | 401 | 0.0 | 632 |
| Msa0452770 | MtrunA17_Chr2g0288011 | 69.014 | 355 | 53 | 4 | 41 | 346 | 49 | 395 | 2.48e-158 | 449 |
| Msa0452770 | MtrunA17_Chr4g0074541 | 68.908 | 357 | 50 | 5 | 41 | 346 | 46 | 392 | 2.37e-148 | 423 |
| Msa0452770 | MtrunA17_Chr2g0291851 | 43.730 | 311 | 125 | 5 | 81 | 343 | 84 | 392 | 7.55e-71 | 226 |
| Msa0452770 | MtrunA17_Chr4g0058971 | 37.037 | 297 | 140 | 3 | 97 | 346 | 81 | 377 | 4.17e-55 | 184 |
| Msa0452770 | MtrunA17_Chr4g0046561 | 37.457 | 291 | 133 | 4 | 102 | 345 | 100 | 388 | 1.82e-54 | 183 |
| Msa0452770 | MtrunA17_Chr6g0449891 | 38.710 | 310 | 139 | 4 | 87 | 346 | 100 | 408 | 3.00e-54 | 183 |
| Msa0452770 | MtrunA17_Chr5g0419001 | 33.535 | 331 | 164 | 5 | 69 | 345 | 65 | 393 | 1.63e-52 | 178 |
| Msa0452770 | MtrunA17_Chr3g0117501 | 36.223 | 323 | 157 | 5 | 72 | 346 | 81 | 402 | 5.14e-51 | 174 |
| Msa0452770 | MtrunA17_Chr3g0114581 | 27.193 | 228 | 129 | 4 | 155 | 346 | 81 | 307 | 1.29e-18 | 85.5 |
| Msa0452770 | MtrunA17_Chr1g0160071 | 24.913 | 289 | 164 | 7 | 108 | 346 | 21 | 306 | 2.19e-18 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0452770 | AT1G61800.1 | 69.945 | 366 | 42 | 6 | 30 | 346 | 42 | 388 | 1.34e-162 | 460 |
| Msa0452770 | AT1G61800.2 | 69.126 | 366 | 45 | 6 | 30 | 346 | 42 | 388 | 3.57e-160 | 454 |
| Msa0452770 | AT5G54800.1 | 74.772 | 329 | 30 | 3 | 70 | 345 | 59 | 387 | 2.20e-158 | 449 |
| Msa0452770 | AT5G17630.1 | 40.204 | 393 | 170 | 7 | 16 | 344 | 11 | 402 | 7.81e-84 | 260 |
| Msa0452770 | AT4G03950.1 | 51.636 | 275 | 70 | 7 | 99 | 346 | 16 | 254 | 4.89e-69 | 218 |
| Msa0452770 | AT5G46110.4 | 34.862 | 327 | 161 | 5 | 69 | 345 | 73 | 397 | 8.56e-54 | 182 |
| Msa0452770 | AT5G46110.1 | 34.862 | 327 | 161 | 5 | 69 | 345 | 73 | 397 | 8.66e-54 | 182 |
| Msa0452770 | AT3G01550.1 | 36.859 | 312 | 147 | 4 | 85 | 346 | 62 | 373 | 3.12e-53 | 180 |
| Msa0452770 | AT5G46110.3 | 35.443 | 316 | 163 | 6 | 69 | 345 | 73 | 386 | 7.73e-53 | 179 |
| Msa0452770 | AT5G46110.2 | 36.491 | 285 | 132 | 3 | 108 | 345 | 2 | 284 | 8.57e-53 | 176 |
| Msa0452770 | AT3G01550.2 | 35.897 | 312 | 145 | 5 | 85 | 346 | 62 | 368 | 5.79e-49 | 169 |
| Msa0452770 | AT5G33320.1 | 35.423 | 319 | 156 | 6 | 75 | 345 | 83 | 399 | 7.81e-47 | 164 |
| Msa0452770 | AT1G77610.1 | 25.517 | 290 | 161 | 8 | 108 | 346 | 16 | 301 | 1.34e-18 | 85.9 |
| Msa0452770 | AT1G21870.1 | 24.221 | 289 | 166 | 7 | 108 | 346 | 22 | 307 | 5.65e-18 | 84.0 |
Find 90 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAACGTACAAGTTGATTT+TGG | 0.170904 | 3_3:+41954039 | Msa0452770:three_prime_UTR |
| CTAAGACTGATCTTGAATTT+TGG | 0.179678 | 3_3:+41950533 | Msa0452770:CDS |
| CCGCAACATCTTCTCGAAAA+AGG | 0.198188 | 3_3:+41951812 | Msa0452770:CDS |
| CAAAACATTGTTTACTATAA+AGG | 0.218132 | 3_3:+41954267 | Msa0452770:three_prime_UTR |
| TGTGTTGGTGTTGGAAATTT+TGG | 0.226645 | 3_3:+41950214 | Msa0452770:CDS |
| ACTGGTTCTGATGCTGGTTT+AGG | 0.229388 | 3_3:+41950085 | Msa0452770:CDS |
| CTCTTATGATGTTGATCTCT+TGG | 0.233486 | 3_3:+41950488 | Msa0452770:CDS |
| GCTGCAAAGAAAGTGAAAAT+TGG | 0.271783 | 3_3:+41950349 | Msa0452770:CDS |
| TCTGGTTTCGAGATTTATCT+TGG | 0.313532 | 3_3:+41951342 | Msa0452770:CDS |
| CAAAATTCAAGATCAGTCTT+AGG | 0.324094 | 3_3:-41950532 | None:intergenic |
| CTGTCTTTAGTTCCAATCAT+TGG | 0.330191 | 3_3:+41951391 | Msa0452770:CDS |
| GGAGCCGCAATTGCTGTCTT+CGG | 0.341789 | 3_3:+41952936 | Msa0452770:CDS |
| TATGACAGATATACGTTTCA+TGG | 0.344750 | 3_3:-41952862 | None:intergenic |
| GTTTCCAATGCTAAATGTTA+AGG | 0.346594 | 3_3:-41952838 | None:intergenic |
| GAGCCGCAATTGCTGTCTTC+GGG | 0.355259 | 3_3:+41952937 | Msa0452770:CDS |
| CAAAGTTCACATGGAAACTT+AGG | 0.369914 | 3_3:-41954483 | None:intergenic |
| CTGGTTCTGATGCTGGTTTA+GGG | 0.374659 | 3_3:+41950086 | Msa0452770:CDS |
| AGAGCATTGACGGGCTGAAT+TGG | 0.376700 | 3_3:-41952912 | None:intergenic |
| GTGATCACTGGTTCTGATGC+TGG | 0.379531 | 3_3:+41950079 | Msa0452770:CDS |
| GAGCTCAATTTCAATATGAT+TGG | 0.383141 | 3_3:+41951439 | Msa0452770:CDS |
| GAACATTTATTTCAATTCAT+TGG | 0.385754 | 3_3:-41954213 | None:intergenic |
| GTTGCTGTTGCACACACAAT+TGG | 0.398110 | 3_3:+41951235 | Msa0452770:CDS |
| TATTCTCGGCCTCTATAAAC+AGG | 0.405606 | 3_3:-41954235 | None:intergenic |
| TCTTATGATGTTGATCTCTT+GGG | 0.408536 | 3_3:+41950489 | Msa0452770:CDS |
| AAACAATAGAATTTGCTAAC+AGG | 0.409392 | 3_3:+41953977 | Msa0452770:exon |
| CTGCAAAGAAAGTGAAAATT+GGG | 0.417900 | 3_3:+41950350 | Msa0452770:CDS |
| TTTCCAATGCTAAATGTTAA+GGG | 0.432602 | 3_3:-41952837 | None:intergenic |
| ACTTTCTTTGCAGCCTCTGA+AGG | 0.435598 | 3_3:-41950340 | None:intergenic |
| ATAAATGTTCCTGTTTATAG+AGG | 0.436150 | 3_3:+41954226 | Msa0452770:three_prime_UTR |
| ATTCAGCCCGTCAATGCTCT+TGG | 0.442993 | 3_3:+41952915 | Msa0452770:CDS |
| TGCGGCTCCAAGAGCATTGA+CGG | 0.448915 | 3_3:-41952922 | None:intergenic |
| TCTTTAGTTCCAATCATTGG+TGG | 0.450678 | 3_3:+41951394 | Msa0452770:CDS |
| TTATGATAATGTTTCTCAGC+AGG | 0.455058 | 3_3:-41954146 | None:intergenic |
| TTGTCTCAATGATGAAATCA+TGG | 0.456738 | 3_3:-41950047 | None:intergenic |
| TGTAAACGATACAGCAACTT+TGG | 0.463223 | 3_3:-41951284 | None:intergenic |
| AGTGCACATCCACCAATGAT+TGG | 0.466284 | 3_3:-41951403 | None:intergenic |
| TTTGTAAGACTAGGATGATC+CGG | 0.467502 | 3_3:+41954081 | Msa0452770:three_prime_UTR |
| CTGGTTTCGAGATTTATCTT+GGG | 0.470237 | 3_3:+41951343 | Msa0452770:CDS |
| GTTGATGTAAGCCAAGGGTA+AGG | 0.477983 | 3_3:-41950445 | None:intergenic |
| AATTGGACATGTCGCGGCTA+CGG | 0.479497 | 3_3:+41951252 | Msa0452770:CDS |
| TGAATGCTTACCCTTACCCT+TGG | 0.485194 | 3_3:+41950434 | Msa0452770:CDS |
| ACATTGGTGAAGATGCAACT+TGG | 0.494296 | 3_3:+41954365 | Msa0452770:three_prime_UTR |
| ATGAAGGGAAAGTCTGTTAG+TGG | 0.498113 | 3_3:+41951837 | Msa0452770:CDS |
| CGGGACCTTCTTATACTCTC+AGG | 0.506019 | 3_3:+41952956 | Msa0452770:CDS |
| AAAAGATTGTGGTTGAACTA+GGG | 0.507003 | 3_3:-41950122 | None:intergenic |
| TCTCCCTTAACATTTAGCAT+TGG | 0.512173 | 3_3:+41952834 | Msa0452770:CDS |
| AAAGACAGATAGACTGGCAC+AGG | 0.513511 | 3_3:-41951376 | None:intergenic |
| CATATTGCATGTGTTGGTGT+TGG | 0.517284 | 3_3:+41950205 | Msa0452770:CDS |
| TGTTGATCTCTTGGGCCACT+AGG | 0.518207 | 3_3:+41950497 | Msa0452770:CDS |
| GTTTCTTTGTTTGCCGACAT+TGG | 0.522962 | 3_3:+41954349 | Msa0452770:three_prime_UTR |
| TGACGGGCTGAATTGGTGTA+TGG | 0.536988 | 3_3:-41952905 | None:intergenic |
| TTGCTAACAGGAAATCTTCG+AGG | 0.540119 | 3_3:+41953989 | Msa0452770:three_prime_UTR |
| AGATCAGAGATTGAAGGTGC+AGG | 0.549014 | 3_3:+41950313 | Msa0452770:CDS |
| TCAAGGCACATACAAATGAA+AGG | 0.554950 | 3_3:-41954459 | None:intergenic |
| TGCTAACAGGAAATCTTCGA+GGG | 0.555074 | 3_3:+41953990 | Msa0452770:three_prime_UTR |
| GCTGATAGATCAGAGATTGA+AGG | 0.555536 | 3_3:+41950307 | Msa0452770:CDS |
| CAACCTGGTATTGTGATCAC+TGG | 0.556416 | 3_3:+41950067 | Msa0452770:CDS |
| TCAGGTGTCTTACATGTCGT+TGG | 0.558309 | 3_3:+41952803 | Msa0452770:intron |
| GGAACTAAAGACAGATAGAC+TGG | 0.559770 | 3_3:-41951382 | None:intergenic |
| CCTTCCACAGCAATTGCAAA+GGG | 0.561294 | 3_3:-41951909 | None:intergenic |
| AGTTGCATCTTCACCAATGT+CGG | 0.561364 | 3_3:-41954362 | None:intergenic |
| GAGAGAGTTGATGTAAGCCA+AGG | 0.562039 | 3_3:-41950451 | None:intergenic |
| CAAGGCACATACAAATGAAA+GGG | 0.574086 | 3_3:-41954458 | None:intergenic |
| CCTCTTCATATTGCATGTGT+TGG | 0.574445 | 3_3:+41950199 | Msa0452770:CDS |
| TTCACAAGACAAAGTTCACA+TGG | 0.576183 | 3_3:-41954492 | None:intergenic |
| TCAACTCTCTCACTTGCTTG+TGG | 0.577730 | 3_3:+41950463 | Msa0452770:CDS |
| TCCACTATAATCAGATTCCA+AGG | 0.578689 | 3_3:+41949694 | None:intergenic |
| CATTGGTGAAGATGCAACTT+GGG | 0.582117 | 3_3:+41954366 | Msa0452770:three_prime_UTR |
| CCAACACATGCAATATGAAG+AGG | 0.584768 | 3_3:-41950199 | None:intergenic |
| CAGATAGACTGGCACAGGGA+AGG | 0.585869 | 3_3:-41951371 | None:intergenic |
| AAAGTTCACATGGAAACTTA+GGG | 0.589595 | 3_3:-41954482 | None:intergenic |
| TCCTTCCACAGCAATTGCAA+AGG | 0.590569 | 3_3:-41951910 | None:intergenic |
| ATGTTATGCTTGGAAGAAAG+TGG | 0.591151 | 3_3:+41954411 | Msa0452770:three_prime_UTR |
| GGTCCCGAAGACAGCAATTG+CGG | 0.591919 | 3_3:-41952940 | None:intergenic |
| CAAAGGGTGTGAGAATTGCA+AGG | 0.594177 | 3_3:-41951893 | None:intergenic |
| ATTTCATCATTGAGACAACC+TGG | 0.594337 | 3_3:+41950052 | Msa0452770:CDS |
| AAGTACCTGAGAGTATAAGA+AGG | 0.598923 | 3_3:-41952961 | None:intergenic |
| AGGTGCAGGAACACCTTCAG+AGG | 0.600972 | 3_3:+41950327 | Msa0452770:CDS |
| GCGGCTCCAAGAGCATTGAC+GGG | 0.602591 | 3_3:-41952921 | None:intergenic |
| GAAACCAGAACACTAAAAGC+AGG | 0.604333 | 3_3:-41951328 | None:intergenic |
| TTGATGTAAGCCAAGGGTAA+GGG | 0.604430 | 3_3:-41950444 | None:intergenic |
| CACATGGAAACTTAGGGTCA+AGG | 0.607231 | 3_3:-41954476 | None:intergenic |
| AGAGAGTTGATGTAAGCCAA+GGG | 0.622530 | 3_3:-41950450 | None:intergenic |
| TTTACACATATCATCAAGAG+TGG | 0.634575 | 3_3:+41951301 | Msa0452770:CDS |
| GAACCAGTGATCACAATACC+AGG | 0.646544 | 3_3:-41950070 | None:intergenic |
| TATCTACATGCACTAAACGC+CGG | 0.653859 | 3_3:-41954100 | None:intergenic |
| ACACACAATTGGACATGTCG+CGG | 0.658566 | 3_3:+41951246 | Msa0452770:CDS |
| AAAGGGTGTGAGAATTGCAA+GGG | 0.685707 | 3_3:-41951892 | None:intergenic |
| AGGAGCTTCAGCAATCCTAG+TGG | 0.698645 | 3_3:-41950512 | None:intergenic |
| AAGACAGATAGACTGGCACA+GGG | 0.744929 | 3_3:-41951375 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACAAATAACATTTTTAAT+CGG | + | chr3_3:41953915-41953934 | Msa0452770:intron | 10.0% |
| !! | GTTTAATATTTATAACAAGA+AGG | + | chr3_3:41950408-41950427 | Msa0452770:intron | 15.0% |
| !!! | TTCTTATATGTTTTTTGTTT+TGG | + | chr3_3:41950652-41950671 | Msa0452770:intron | 15.0% |
| !!! | TTTTGAGAAATTATTATTCT+CGG | - | chr3_3:41954252-41954271 | None:intergenic | 15.0% |
| !!! | TTATTGTCAAAAAAGTATAG+AGG | - | chr3_3:41949727-41949746 | None:intergenic | 20.0% |
| !! | AAAACAAATTCAAACTTACA+GGG | - | chr3_3:41950570-41950589 | None:intergenic | 20.0% |
| !! | AAAAACAAATTCAAACTTAC+AGG | - | chr3_3:41950571-41950590 | None:intergenic | 20.0% |
| !!! | GTTTTTGTTTTTTTCTTTAG+AGG | + | chr3_3:41950585-41950604 | Msa0452770:intron | 20.0% |
| !! | TGAGTTAAGAAAAAAAACAA+AGG | + | chr3_3:41950738-41950757 | Msa0452770:intron | 20.0% |
| !!! | TATTTTGTTTTTACGTTGTT+TGG | + | chr3_3:41951485-41951504 | Msa0452770:intron | 20.0% |
| !! | ATAATCTGTGTTTGATTAAT+TGG | + | chr3_3:41951577-41951596 | Msa0452770:intron | 20.0% |
| !! | TAATCTGTGTTTGATTAATT+GGG | + | chr3_3:41951578-41951597 | Msa0452770:intron | 20.0% |
| !! | AGTCAATGAAATCAAAATTA+GGG | - | chr3_3:41951731-41951750 | None:intergenic | 20.0% |
| !! | AAGTCAATGAAATCAAAATT+AGG | - | chr3_3:41951732-41951751 | None:intergenic | 20.0% |
| !! | TTTAATTACCATAAGAATTG+AGG | - | chr3_3:41951984-41952003 | None:intergenic | 20.0% |
| !!! | GATCGTGAATTTTTTTTTAA+AGG | - | chr3_3:41952095-41952114 | None:intergenic | 20.0% |
| !!! | AAAATTCACGATCTTTTATT+AGG | + | chr3_3:41952102-41952121 | Msa0452770:intron | 20.0% |
| !!! | GCAACTAAAGAATTTAAAAT+TGG | - | chr3_3:41952427-41952446 | None:intergenic | 20.0% |
| !!! | ATTTTAAATTCTTTAGTTGC+AGG | + | chr3_3:41952427-41952446 | Msa0452770:intron | 20.0% |
| !!! | AGTTAATGTTGTTTAAATGA+TGG | + | chr3_3:41952568-41952587 | Msa0452770:intron | 20.0% |
| !!! | TTTTTTTTTCTTGTTCTGAT+TGG | + | chr3_3:41952648-41952667 | Msa0452770:intron | 20.0% |
| !!! | TTTTTTTTCTTGTTCTGATT+GGG | + | chr3_3:41952649-41952668 | Msa0452770:intron | 20.0% |
| !! | AATAATATGAAGCACAATTA+AGG | - | chr3_3:41953257-41953276 | None:intergenic | 20.0% |
| !! | TTAATTGTGCTTCATATTAT+TGG | + | chr3_3:41953256-41953275 | Msa0452770:intron | 20.0% |
| !! | ATTCATTGTCTTTATGAAAA+GGG | + | chr3_3:41953462-41953481 | Msa0452770:intron | 20.0% |
| !!! | TTCTTTTTCTATATTTTCCA+AGG | - | chr3_3:41953792-41953811 | None:intergenic | 20.0% |
| !! | TTGGAAAATATAGAAAAAGA+AGG | + | chr3_3:41953791-41953810 | Msa0452770:intron | 20.0% |
| !! | TGGAAAATATAGAAAAAGAA+GGG | + | chr3_3:41953792-41953811 | Msa0452770:intron | 20.0% |
| !! | GAACATTTATTTCAATTCAT+TGG | - | chr3_3:41954216-41954235 | None:intergenic | 20.0% |
| !! | CAAAACATTGTTTACTATAA+AGG | + | chr3_3:41954267-41954286 | Msa0452770:three_prime_UTR | 20.0% |
| !! | AAAAAAAAACAGCACTAAAT+AGG | - | chr3_3:41954323-41954342 | None:intergenic | 20.0% |
| !!! | AACTTTTCACTTTTCTAAAA+GGG | + | chr3_3:41954521-41954540 | Msa0452770:three_prime_UTR | 20.0% |
| !!! | TTTTTTATTGACAAAAAGCA+TGG | - | chr3_3:41954592-41954611 | None:intergenic | 20.0% |
| ! | AAAGAAATGAAGCAGAAAAA+CGG | - | chr3_3:41949952-41949971 | None:intergenic | 25.0% |
| ! | AAAGATGGTAAAAAAGATTG+TGG | - | chr3_3:41950136-41950155 | None:intergenic | 25.0% |
| !!! | ACAATCTTTTTTACCATCTT+TGG | + | chr3_3:41950135-41950154 | Msa0452770:CDS | 25.0% |
| ! | AGGAAAAGAGAAAAATTGAT+TGG | + | chr3_3:41950605-41950624 | Msa0452770:intron | 25.0% |
| ! | AATTGATTGGAGAAATTGAT+AGG | + | chr3_3:41950618-41950637 | Msa0452770:intron | 25.0% |
| !! | TGCAATTTTGAACTCATATA+TGG | + | chr3_3:41950696-41950715 | Msa0452770:intron | 25.0% |
| ! | GAAATATTTCAATGTGTTTG+TGG | + | chr3_3:41950802-41950821 | Msa0452770:intron | 25.0% |
| !! | CAAAAAATAGCAATTTGTTC+TGG | - | chr3_3:41951093-41951112 | None:intergenic | 25.0% |
| ! | TCAAAGTGATAAATGAATGA+AGG | - | chr3_3:41951177-41951196 | None:intergenic | 25.0% |
| !! | ACTAGAATTTTGAATGTGAA+TGG | + | chr3_3:41951541-41951560 | Msa0452770:intron | 25.0% |
| ! | GTCAATGAAATCAAAATTAG+GGG | - | chr3_3:41951730-41951749 | None:intergenic | 25.0% |
| ! | TAACTATTATATCAGTCTTC+TGG | + | chr3_3:41952131-41952150 | Msa0452770:intron | 25.0% |
| ! | CATAATATCAATATGGTGAA+AGG | + | chr3_3:41952228-41952247 | Msa0452770:intron | 25.0% |
| ! | AAAAAAATTATTCATGCACG+AGG | - | chr3_3:41952605-41952624 | None:intergenic | 25.0% |
| ! | TCTTACAACCAAACAATAAA+CGG | - | chr3_3:41952691-41952710 | None:intergenic | 25.0% |
| ! | TCCATATTATGACTAAAGTA+TGG | + | chr3_3:41952721-41952740 | Msa0452770:intron | 25.0% |
| ! | ATTCTATCATCTATACAATC+AGG | + | chr3_3:41952785-41952804 | Msa0452770:intron | 25.0% |
| ! | TTTCCAATGCTAAATGTTAA+GGG | - | chr3_3:41952840-41952859 | None:intergenic | 25.0% |
| ! | TGATGAATAATATGAGTAGA+GGG | - | chr3_3:41953197-41953216 | None:intergenic | 25.0% |
| ! | ATGATGAATAATATGAGTAG+AGG | - | chr3_3:41953198-41953217 | None:intergenic | 25.0% |
| ! | CTACTCATATTATTCATCAT+CGG | + | chr3_3:41953198-41953217 | Msa0452770:intron | 25.0% |
| ! | CAGGAAGGAAAAAAAAAAAT+AGG | + | chr3_3:41953335-41953354 | Msa0452770:intron | 25.0% |
| !!! | GGCATTTTTTTTTTTTTCTC+TGG | + | chr3_3:41953410-41953429 | Msa0452770:intron | 25.0% |
| ! | CATTCATTGTCTTTATGAAA+AGG | + | chr3_3:41953461-41953480 | Msa0452770:intron | 25.0% |
| ! | AAGTCAACAAGAGTTTATTA+TGG | + | chr3_3:41953503-41953522 | Msa0452770:intron | 25.0% |
| ! | AGAGTTTATTATGGAAAAGA+TGG | + | chr3_3:41953512-41953531 | Msa0452770:intron | 25.0% |
| !!! | AAACAATAGAATTTGCTAAC+AGG | + | chr3_3:41953977-41953996 | Msa0452770:exon | 25.0% |
| ! | ATAAATGTTCCTGTTTATAG+AGG | + | chr3_3:41954226-41954245 | Msa0452770:three_prime_UTR | 25.0% |
| !!! | CAACTTTTCACTTTTCTAAA+AGG | + | chr3_3:41954520-41954539 | Msa0452770:three_prime_UTR | 25.0% |
| ATGTGAAAGAATGTGTCTTT+AGG | - | chr3_3:41949882-41949901 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTTCCCTCTTTTA+AGG | + | chr3_3:41949977-41949996 | Msa0452770:intron | 30.0% |
| !! | ATCATGGTTTTCAAGGTAAA+GGG | - | chr3_3:41950034-41950053 | None:intergenic | 30.0% |
| !! | AATCATGGTTTTCAAGGTAA+AGG | - | chr3_3:41950035-41950054 | None:intergenic | 30.0% |
| ! | TGATGAAATCATGGTTTTCA+AGG | - | chr3_3:41950041-41950060 | None:intergenic | 30.0% |
| TTGTCTCAATGATGAAATCA+TGG | - | chr3_3:41950050-41950069 | None:intergenic | 30.0% | |
| AAAAGATTGTGGTTGAACTA+GGG | - | chr3_3:41950125-41950144 | None:intergenic | 30.0% | |
| AAAAAGATTGTGGTTGAACT+AGG | - | chr3_3:41950126-41950145 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTACCATCTTTGGT+TGG | + | chr3_3:41950139-41950158 | Msa0452770:CDS | 30.0% |
| !!! | ATCAGAGAAGAGTTTTGAAA+AGG | + | chr3_3:41950255-41950274 | Msa0452770:CDS | 30.0% |
| !!! | TCAGAGAAGAGTTTTGAAAA+GGG | + | chr3_3:41950256-41950275 | Msa0452770:CDS | 30.0% |
| CTGCAAAGAAAGTGAAAATT+GGG | + | chr3_3:41950350-41950369 | Msa0452770:CDS | 30.0% | |
| ! | TTGGGATATATTTTGCAACT+TGG | + | chr3_3:41950368-41950387 | Msa0452770:CDS | 30.0% |
| ! | GATATATTTTGCAACTTGGT+GGG | + | chr3_3:41950372-41950391 | Msa0452770:CDS | 30.0% |
| TCTTATGATGTTGATCTCTT+GGG | + | chr3_3:41950489-41950508 | Msa0452770:CDS | 30.0% | |
| CAAAATTCAAGATCAGTCTT+AGG | - | chr3_3:41950535-41950554 | None:intergenic | 30.0% | |
| ! | CTAAGACTGATCTTGAATTT+TGG | + | chr3_3:41950533-41950552 | Msa0452770:CDS | 30.0% |
| ATATTTCAATGTGTTTGTGG+AGG | + | chr3_3:41950805-41950824 | Msa0452770:intron | 30.0% | |
| ATAGAGTACAAAGGATTGAA+TGG | - | chr3_3:41950948-41950967 | None:intergenic | 30.0% | |
| ATTATGCACATAGAGTACAA+AGG | - | chr3_3:41950957-41950976 | None:intergenic | 30.0% | |
| TTTGTACTCTATGTGCATAA+TGG | + | chr3_3:41950956-41950975 | Msa0452770:intron | 30.0% | |
| TTTGACAACACTTAGCTAAA+TGG | - | chr3_3:41951023-41951042 | None:intergenic | 30.0% | |
| ! | AGCTAAGTGTTGTCAAATAA+CGG | + | chr3_3:41951026-41951045 | Msa0452770:intron | 30.0% |
| CGAACAATTGTGAAATGATA+TGG | + | chr3_3:41951144-41951163 | Msa0452770:intron | 30.0% | |
| TTCTTTGATGTTTCAACTTC+AGG | + | chr3_3:41951213-41951232 | Msa0452770:intron | 30.0% | |
| TTTACACATATCATCAAGAG+TGG | + | chr3_3:41951301-41951320 | Msa0452770:CDS | 30.0% | |
| GAGCTCAATTTCAATATGAT+TGG | + | chr3_3:41951439-41951458 | Msa0452770:CDS | 30.0% | |
| ATTACAAGAAACATGTTCGT+TGG | - | chr3_3:41951680-41951699 | None:intergenic | 30.0% | |
| !!! | TTTTTTTCCTTCCCTTTTTC+AGG | + | chr3_3:41951750-41951769 | Msa0452770:intron | 30.0% |
| !!! | TTCCCTTTTTCAGGTTTTAT+GGG | + | chr3_3:41951759-41951778 | Msa0452770:intron | 30.0% |
| AAATTGGACCTCAATTCTTA+TGG | + | chr3_3:41951973-41951992 | Msa0452770:intron | 30.0% | |
| CGATGACAACAAACATAATA+GGG | - | chr3_3:41952032-41952051 | None:intergenic | 30.0% | |
| ACGATGACAACAAACATAAT+AGG | - | chr3_3:41952033-41952052 | None:intergenic | 30.0% | |
| GTCGAATGAATCAATGATTT+AGG | - | chr3_3:41952195-41952214 | None:intergenic | 30.0% | |
| ATTGATATTATGCGTGTCTT+TGG | - | chr3_3:41952220-41952239 | None:intergenic | 30.0% | |
| AGACACGCATAATATCAATA+TGG | + | chr3_3:41952221-41952240 | Msa0452770:intron | 30.0% | |
| !!! | TGTCCATCCTTATTTTGATT+TGG | + | chr3_3:41952478-41952497 | Msa0452770:intron | 30.0% |
| !!! | GTCCATCCTTATTTTGATTT+GGG | + | chr3_3:41952479-41952498 | Msa0452770:intron | 30.0% |
| TCAAGTCCCAAATCAAAATA+AGG | - | chr3_3:41952488-41952507 | None:intergenic | 30.0% | |
| ACATTAACTCATAAAAACCC+AGG | - | chr3_3:41952557-41952576 | None:intergenic | 30.0% | |
| ACTTTAGTCATAATATGGAG+AGG | - | chr3_3:41952720-41952739 | None:intergenic | 30.0% | |
| GCCATACTTTAGTCATAATA+TGG | - | chr3_3:41952725-41952744 | None:intergenic | 30.0% | |
| TATTATGACTAAAGTATGGC+TGG | + | chr3_3:41952725-41952744 | Msa0452770:intron | 30.0% | |
| GTTTCCAATGCTAAATGTTA+AGG | - | chr3_3:41952841-41952860 | None:intergenic | 30.0% | |
| TATGACAGATATACGTTTCA+TGG | - | chr3_3:41952865-41952884 | None:intergenic | 30.0% | |
| TATTACTGTTACTACATGTC+AGG | + | chr3_3:41953125-41953144 | Msa0452770:intron | 30.0% | |
| ATTACTGTTACTACATGTCA+GGG | + | chr3_3:41953126-41953145 | Msa0452770:intron | 30.0% | |
| ! | TGAATGAGTTTGAAATCCTA+TGG | - | chr3_3:41953447-41953466 | None:intergenic | 30.0% |
| TTGTCTTTATGAAAAGGGTT+TGG | + | chr3_3:41953467-41953486 | Msa0452770:intron | 30.0% | |
| GTTTATTATGGAAAAGATGG+AGG | + | chr3_3:41953515-41953534 | Msa0452770:intron | 30.0% | |
| ! | TAGGTGATCCAATGTTTTAT+TGG | + | chr3_3:41953543-41953562 | Msa0452770:intron | 30.0% |
| TATAGCTGCCAATAAAACAT+TGG | - | chr3_3:41953554-41953573 | None:intergenic | 30.0% | |
| ! | TTTTATTGGCAGCTATACTT+GGG | + | chr3_3:41953557-41953576 | Msa0452770:intron | 30.0% |
| AAGTTCAAACCAATAGAGTT+AGG | - | chr3_3:41953590-41953609 | None:intergenic | 30.0% | |
| AAGAAGGGTTAGAAACAATT+TGG | + | chr3_3:41953807-41953826 | Msa0452770:intron | 30.0% | |
| CTGCAAAAATCAGTAAAACA+AGG | - | chr3_3:41953954-41953973 | None:intergenic | 30.0% | |
| !!! | CTTGTTTTACTGATTTTTGC+AGG | + | chr3_3:41953952-41953971 | Msa0452770:intron | 30.0% |
| !!! | TCAAACGTACAAGTTGATTT+TGG | + | chr3_3:41954039-41954058 | Msa0452770:three_prime_UTR | 30.0% |
| ! | TTATGATAATGTTTCTCAGC+AGG | - | chr3_3:41954149-41954168 | None:intergenic | 30.0% |
| ! | TGAGCTTTTTATGTTATGCT+TGG | + | chr3_3:41954401-41954420 | Msa0452770:three_prime_UTR | 30.0% |
| AAAGTTCACATGGAAACTTA+GGG | - | chr3_3:41954485-41954504 | None:intergenic | 30.0% | |
| AGTATAGAGGAATGATACCT+TGG | - | chr3_3:41949714-41949733 | None:intergenic | 35.0% | |
| !!! | TGTTTCGCAGTGTTTTGTTT+TGG | + | chr3_3:41949810-41949829 | Msa0452770:intron | 35.0% |
| ATCTCAACTCTGACACAAAA+GGG | + | chr3_3:41949914-41949933 | Msa0452770:intron | 35.0% | |
| ATTTCATCATTGAGACAACC+TGG | + | chr3_3:41950052-41950071 | Msa0452770:CDS | 35.0% | |
| ! | TTTTTACCATCTTTGGTTGG+TGG | + | chr3_3:41950142-41950161 | Msa0452770:CDS | 35.0% |
| !!! | TGTGTTGGTGTTGGAAATTT+TGG | + | chr3_3:41950214-41950233 | Msa0452770:CDS | 35.0% |
| !!! | GTGTTGGTGTTGGAAATTTT+GGG | + | chr3_3:41950215-41950234 | Msa0452770:CDS | 35.0% |
| !!! | GAGTTTTGAAAAGGGTGATT+TGG | + | chr3_3:41950264-41950283 | Msa0452770:CDS | 35.0% |
| GCTGCAAAGAAAGTGAAAAT+TGG | + | chr3_3:41950349-41950368 | Msa0452770:CDS | 35.0% | |
| ! | GGATATATTTTGCAACTTGG+TGG | + | chr3_3:41950371-41950390 | Msa0452770:CDS | 35.0% |
| CTCTTATGATGTTGATCTCT+TGG | + | chr3_3:41950488-41950507 | Msa0452770:CDS | 35.0% | |
| !!! | TTTTAGAATCCGAATAGCTC+AGG | + | chr3_3:41950854-41950873 | Msa0452770:intron | 35.0% |
| ! | TTTAGAATCCGAATAGCTCA+GGG | + | chr3_3:41950855-41950874 | Msa0452770:intron | 35.0% |
| GGATCAGTATTGTCAAATAG+TGG | + | chr3_3:41950977-41950996 | Msa0452770:intron | 35.0% | |
| TGTGATTGACAGCAATGTAA+CGG | + | chr3_3:41951118-41951137 | Msa0452770:intron | 35.0% | |
| TGTAAACGATACAGCAACTT+TGG | - | chr3_3:41951287-41951306 | None:intergenic | 35.0% | |
| ! | TCTGGTTTCGAGATTTATCT+TGG | + | chr3_3:41951342-41951361 | Msa0452770:CDS | 35.0% |
| CTGGTTTCGAGATTTATCTT+GGG | + | chr3_3:41951343-41951362 | Msa0452770:CDS | 35.0% | |
| ! | CTGTCTTTAGTTCCAATCAT+TGG | + | chr3_3:41951391-41951410 | Msa0452770:CDS | 35.0% |
| ! | TCTTTAGTTCCAATCATTGG+TGG | + | chr3_3:41951394-41951413 | Msa0452770:CDS | 35.0% |
| !! | GCCAGTAGTTTTGCATTTTT+TGG | + | chr3_3:41951602-41951621 | Msa0452770:intron | 35.0% |
| GCCAAAAAATGCAAAACTAC+TGG | - | chr3_3:41951606-41951625 | None:intergenic | 35.0% | |
| !!! | GCATTTTTTGGCTAGTAATC+TGG | + | chr3_3:41951614-41951633 | Msa0452770:intron | 35.0% |
| CATAAAACCTGAAAAAGGGA+AGG | - | chr3_3:41951760-41951779 | None:intergenic | 35.0% | |
| !!! | CTTCCCTTTTTCAGGTTTTA+TGG | + | chr3_3:41951758-41951777 | Msa0452770:intron | 35.0% |
| !!! | TCCCTTTTTCAGGTTTTATG+GGG | + | chr3_3:41951760-41951779 | Msa0452770:intron | 35.0% |
| CAATATGGTGAAAGGTCAAA+TGG | + | chr3_3:41952236-41952255 | Msa0452770:intron | 35.0% | |
| GTCCCAAATCAAAATAAGGA+TGG | - | chr3_3:41952484-41952503 | None:intergenic | 35.0% | |
| TTCCACTTCCGTTTATTGTT+TGG | + | chr3_3:41952680-41952699 | Msa0452770:intron | 35.0% | |
| AACCAAACAATAAACGGAAG+TGG | - | chr3_3:41952685-41952704 | None:intergenic | 35.0% | |
| TCTCCCTTAACATTTAGCAT+TGG | + | chr3_3:41952834-41952853 | Msa0452770:CDS | 35.0% | |
| ! | AAGTACCTGAGAGTATAAGA+AGG | - | chr3_3:41952964-41952983 | None:intergenic | 35.0% |
| TGAAAGATCCATTACGAAGA+GGG | + | chr3_3:41953280-41953299 | Msa0452770:intron | 35.0% | |
| TCTTTATGAAAAGGGTTTGG+TGG | + | chr3_3:41953470-41953489 | Msa0452770:intron | 35.0% | |
| !! | GTTTTATTGGCAGCTATACT+TGG | + | chr3_3:41953556-41953575 | Msa0452770:intron | 35.0% |
| TCAAACCAATAGAGTTAGGT+AGG | - | chr3_3:41953586-41953605 | None:intergenic | 35.0% | |
| GAAAAGGAATATGTGATGGT+AGG | - | chr3_3:41953618-41953637 | None:intergenic | 35.0% | |
| CTTGGAAAAGGAATATGTGA+TGG | - | chr3_3:41953622-41953641 | None:intergenic | 35.0% | |
| !! | TGTTGACATTGACTTGGAAA+AGG | - | chr3_3:41953634-41953653 | None:intergenic | 35.0% |
| ! | AACTCATGTTGACATTGACT+TGG | - | chr3_3:41953640-41953659 | None:intergenic | 35.0% |
| AAGTCAATGTCAACATGAGT+TGG | + | chr3_3:41953639-41953658 | Msa0452770:intron | 35.0% | |
| TATTAGAAGCCTCAATGTGA+AGG | - | chr3_3:41953727-41953746 | None:intergenic | 35.0% | |
| TTCACATTGAGGCTTCTAAT+AGG | + | chr3_3:41953726-41953745 | Msa0452770:intron | 35.0% | |
| GCTTCTAATAGGAGATTCAA+TGG | + | chr3_3:41953737-41953756 | Msa0452770:intron | 35.0% | |
| !! | TACATGGAAACTGCTTTTAC+TGG | - | chr3_3:41953766-41953785 | None:intergenic | 35.0% |
| AGTAAAAGCAGTTTCCATGT+AGG | + | chr3_3:41953765-41953784 | Msa0452770:intron | 35.0% | |
| ! | ATATTTTCCAAGGTCCTACA+TGG | - | chr3_3:41953782-41953801 | None:intergenic | 35.0% |
| TTGAGATTTCTACAGTTGGT+AGG | - | chr3_3:41953868-41953887 | None:intergenic | 35.0% | |
| !!! | CAAGTTGATTTTGGAACATG+TGG | + | chr3_3:41954048-41954067 | Msa0452770:three_prime_UTR | 35.0% |
| ! | TGCTGGATTTTTGTAAGACT+AGG | + | chr3_3:41954072-41954091 | Msa0452770:three_prime_UTR | 35.0% |
| TTTGTAAGACTAGGATGATC+CGG | + | chr3_3:41954081-41954100 | Msa0452770:three_prime_UTR | 35.0% | |
| ATGTTATGCTTGGAAGAAAG+TGG | + | chr3_3:41954411-41954430 | Msa0452770:three_prime_UTR | 35.0% | |
| CAAGGCACATACAAATGAAA+GGG | - | chr3_3:41954461-41954480 | None:intergenic | 35.0% | |
| TCAAGGCACATACAAATGAA+AGG | - | chr3_3:41954462-41954481 | None:intergenic | 35.0% | |
| CAAAGTTCACATGGAAACTT+AGG | - | chr3_3:41954486-41954505 | None:intergenic | 35.0% | |
| TTCACAAGACAAAGTTCACA+TGG | - | chr3_3:41954495-41954514 | None:intergenic | 35.0% | |
| CAAACCTTTCAAGATCTCAG+AGG | + | chr3_3:41949844-41949863 | Msa0452770:intron | 40.0% | |
| !! | ATGTCCTCTGAGATCTTGAA+AGG | - | chr3_3:41949851-41949870 | None:intergenic | 40.0% |
| GATCTCAACTCTGACACAAA+AGG | + | chr3_3:41949913-41949932 | Msa0452770:intron | 40.0% | |
| CCGACAGAAACCTTAAAAGA+GGG | - | chr3_3:41949990-41950009 | None:intergenic | 40.0% | |
| !!! | CCCTCTTTTAAGGTTTCTGT+CGG | + | chr3_3:41949987-41950006 | Msa0452770:intron | 40.0% |
| TCCGACAGAAACCTTAAAAG+AGG | - | chr3_3:41949991-41950010 | None:intergenic | 40.0% | |
| ! | GATTTTCCACCAACCAAAGA+TGG | - | chr3_3:41950151-41950170 | None:intergenic | 40.0% |
| CCAACACATGCAATATGAAG+AGG | - | chr3_3:41950202-41950221 | None:intergenic | 40.0% | |
| CCTCTTCATATTGCATGTGT+TGG | + | chr3_3:41950199-41950218 | Msa0452770:CDS | 40.0% | |
| ! | CATATTGCATGTGTTGGTGT+TGG | + | chr3_3:41950205-41950224 | Msa0452770:CDS | 40.0% |
| GCTGATAGATCAGAGATTGA+AGG | + | chr3_3:41950307-41950326 | Msa0452770:CDS | 40.0% | |
| TTGATGTAAGCCAAGGGTAA+GGG | - | chr3_3:41950447-41950466 | None:intergenic | 40.0% | |
| !! | AGAGAGTTGATGTAAGCCAA+GGG | - | chr3_3:41950453-41950472 | None:intergenic | 40.0% |
| AATGTGTTTGTGGAGGTTTG+TGG | + | chr3_3:41950812-41950831 | Msa0452770:intron | 40.0% | |
| ATGTGTTTGTGGAGGTTTGT+GGG | + | chr3_3:41950813-41950832 | Msa0452770:intron | 40.0% | |
| ! | TGTGGGGTTTTTATGCAGTT+CGG | + | chr3_3:41950830-41950849 | Msa0452770:intron | 40.0% |
| GTACAAAGGATTGAATGGAC+TGG | - | chr3_3:41950943-41950962 | None:intergenic | 40.0% | |
| GAAACCAGAACACTAAAAGC+AGG | - | chr3_3:41951331-41951350 | None:intergenic | 40.0% | |
| GGAACTAAAGACAGATAGAC+TGG | - | chr3_3:41951385-41951404 | None:intergenic | 40.0% | |
| TTTGGCGCAATATAAGTTCG+AGG | + | chr3_3:41951503-41951522 | Msa0452770:intron | 40.0% | |
| ACAAGAAACATGTTCGTTGG+TGG | - | chr3_3:41951677-41951696 | None:intergenic | 40.0% | |
| CCCCCATAAAACCTGAAAAA+GGG | - | chr3_3:41951764-41951783 | None:intergenic | 40.0% | |
| !!! | CCCTTTTTCAGGTTTTATGG+GGG | + | chr3_3:41951761-41951780 | Msa0452770:intron | 40.0% |
| !!! | CCTTTTTCGAGAAGATGTTG+CGG | - | chr3_3:41951815-41951834 | None:intergenic | 40.0% |
| CGCAACATCTTCTCGAAAAA+GGG | + | chr3_3:41951813-41951832 | Msa0452770:CDS | 40.0% | |
| GCAACATCTTCTCGAAAAAG+GGG | + | chr3_3:41951814-41951833 | Msa0452770:CDS | 40.0% | |
| TTCTCGAAAAAGGGGATGAA+GGG | + | chr3_3:41951822-41951841 | Msa0452770:CDS | 40.0% | |
| ATGAAGGGAAAGTCTGTTAG+TGG | + | chr3_3:41951837-41951856 | Msa0452770:CDS | 40.0% | |
| ! | AAAGGGTGTGAGAATTGCAA+GGG | - | chr3_3:41951895-41951914 | None:intergenic | 40.0% |
| AAAACAGCTCTCGCTGAAAT+TGG | + | chr3_3:41951957-41951976 | Msa0452770:intron | 40.0% | |
| ATAGATTGAGTAGTCTCGAC+AGG | - | chr3_3:41952289-41952308 | None:intergenic | 40.0% | |
| ATATGTAGCTCCAACAAGTC+AGG | + | chr3_3:41953003-41953022 | Msa0452770:intron | 40.0% | |
| ! | ACACCATTAACCTGACTTGT+TGG | - | chr3_3:41953016-41953035 | None:intergenic | 40.0% |
| ! | GAGGGCACAGTAAAAAATGA+GGG | - | chr3_3:41953179-41953198 | None:intergenic | 40.0% |
| ! | AGAGGGCACAGTAAAAAATG+AGG | - | chr3_3:41953180-41953199 | None:intergenic | 40.0% |
| CTGAAAGATCCATTACGAAG+AGG | + | chr3_3:41953279-41953298 | Msa0452770:intron | 40.0% | |
| AACACATTCCCTCTTCGTAA+TGG | - | chr3_3:41953291-41953310 | None:intergenic | 40.0% | |
| ATTACGAAGAGGGAATGTGT+TGG | + | chr3_3:41953290-41953309 | Msa0452770:intron | 40.0% | |
| TTACGAAGAGGGAATGTGTT+GGG | + | chr3_3:41953291-41953310 | Msa0452770:intron | 40.0% | |
| !! | GTTTGTGGTTTGCTCATTAC+AGG | + | chr3_3:41953316-41953335 | Msa0452770:intron | 40.0% |
| ATAGGACTAGAACCTCAAAG+TGG | + | chr3_3:41953353-41953372 | Msa0452770:intron | 40.0% | |
| ACCAATGTGCTTTGCTAGAA+GGG | - | chr3_3:41953383-41953402 | None:intergenic | 40.0% | |
| ! | TCTGGAGTAAAAACTGCCAT+AGG | + | chr3_3:41953428-41953447 | Msa0452770:intron | 40.0% |
| GGATTCCTACCTAACTCTAT+TGG | + | chr3_3:41953578-41953597 | Msa0452770:intron | 40.0% | |
| AAGGAATATGTGATGGTAGG+TGG | - | chr3_3:41953615-41953634 | None:intergenic | 40.0% | |
| CCAGTTGAGATTTCTACAGT+TGG | - | chr3_3:41953872-41953891 | None:intergenic | 40.0% | |
| CCAACTGTAGAAATCTCAAC+TGG | + | chr3_3:41953869-41953888 | Msa0452770:intron | 40.0% | |
| GTAGAAATCTCAACTGGAGT+TGG | + | chr3_3:41953875-41953894 | Msa0452770:intron | 40.0% | |
| TTGCTAACAGGAAATCTTCG+AGG | + | chr3_3:41953989-41954008 | Msa0452770:three_prime_UTR | 40.0% | |
| TGCTAACAGGAAATCTTCGA+GGG | + | chr3_3:41953990-41954009 | Msa0452770:three_prime_UTR | 40.0% | |
| TATCTACATGCACTAAACGC+CGG | - | chr3_3:41954103-41954122 | None:intergenic | 40.0% | |
| TATTCTCGGCCTCTATAAAC+AGG | - | chr3_3:41954238-41954257 | None:intergenic | 40.0% | |
| ! | GTTTCTTTGTTTGCCGACAT+TGG | + | chr3_3:41954349-41954368 | Msa0452770:three_prime_UTR | 40.0% |
| AGTTGCATCTTCACCAATGT+CGG | - | chr3_3:41954365-41954384 | None:intergenic | 40.0% | |
| ACATTGGTGAAGATGCAACT+TGG | + | chr3_3:41954365-41954384 | Msa0452770:three_prime_UTR | 40.0% | |
| CATTGGTGAAGATGCAACTT+GGG | + | chr3_3:41954366-41954385 | Msa0452770:three_prime_UTR | 40.0% | |
| CAACCTGGTATTGTGATCAC+TGG | + | chr3_3:41950067-41950086 | Msa0452770:CDS | 45.0% | |
| GAACCAGTGATCACAATACC+AGG | - | chr3_3:41950073-41950092 | None:intergenic | 45.0% | |
| !! | ACTGGTTCTGATGCTGGTTT+AGG | + | chr3_3:41950085-41950104 | Msa0452770:CDS | 45.0% |
| !! | CTGGTTCTGATGCTGGTTTA+GGG | + | chr3_3:41950086-41950105 | Msa0452770:CDS | 45.0% |
| ! | AGATCAGAGATTGAAGGTGC+AGG | + | chr3_3:41950313-41950332 | Msa0452770:CDS | 45.0% |
| ACTTTCTTTGCAGCCTCTGA+AGG | - | chr3_3:41950343-41950362 | None:intergenic | 45.0% | |
| TGAATGCTTACCCTTACCCT+TGG | + | chr3_3:41950434-41950453 | Msa0452770:CDS | 45.0% | |
| GTTGATGTAAGCCAAGGGTA+AGG | - | chr3_3:41950448-41950467 | None:intergenic | 45.0% | |
| !! | GAGAGAGTTGATGTAAGCCA+AGG | - | chr3_3:41950454-41950473 | None:intergenic | 45.0% |
| TCAACTCTCTCACTTGCTTG+TGG | + | chr3_3:41950463-41950482 | Msa0452770:CDS | 45.0% | |
| TGTGTTTGTGGAGGTTTGTG+GGG | + | chr3_3:41950814-41950833 | Msa0452770:intron | 45.0% | |
| ! | GTTGCTGTTGCACACACAAT+TGG | + | chr3_3:41951235-41951254 | Msa0452770:CDS | 45.0% |
| ACACACAATTGGACATGTCG+CGG | + | chr3_3:41951246-41951265 | Msa0452770:CDS | 45.0% | |
| AAGACAGATAGACTGGCACA+GGG | - | chr3_3:41951378-41951397 | None:intergenic | 45.0% | |
| AAAGACAGATAGACTGGCAC+AGG | - | chr3_3:41951379-41951398 | None:intergenic | 45.0% | |
| AGTGCACATCCACCAATGAT+TGG | - | chr3_3:41951406-41951425 | None:intergenic | 45.0% | |
| GCGCAATATAAGTTCGAGGT+AGG | + | chr3_3:41951507-41951526 | Msa0452770:intron | 45.0% | |
| GCCCCCATAAAACCTGAAAA+AGG | - | chr3_3:41951765-41951784 | None:intergenic | 45.0% | |
| GGGGGCTATGATATCAAATC+TGG | + | chr3_3:41951779-41951798 | Msa0452770:CDS | 45.0% | |
| CCGCAACATCTTCTCGAAAA+AGG | + | chr3_3:41951812-41951831 | Msa0452770:CDS | 45.0% | |
| CTTCTCGAAAAAGGGGATGA+AGG | + | chr3_3:41951821-41951840 | Msa0452770:CDS | 45.0% | |
| ! | CAAAGGGTGTGAGAATTGCA+AGG | - | chr3_3:41951896-41951915 | None:intergenic | 45.0% |
| CCTTCCACAGCAATTGCAAA+GGG | - | chr3_3:41951912-41951931 | None:intergenic | 45.0% | |
| TCCTTCCACAGCAATTGCAA+AGG | - | chr3_3:41951913-41951932 | None:intergenic | 45.0% | |
| CTCTCGCGTATTCTCTACAT+AGG | - | chr3_3:41952381-41952400 | None:intergenic | 45.0% | |
| TCAGGTGTCTTACATGTCGT+TGG | + | chr3_3:41952803-41952822 | Msa0452770:intron | 45.0% | |
| GCTCCAACAAGTCAGGTTAA+TGG | + | chr3_3:41953010-41953029 | Msa0452770:intron | 45.0% | |
| GTCTTGTGTACGACACTTGT+TGG | + | chr3_3:41953036-41953055 | Msa0452770:intron | 45.0% | |
| TACGAAGAGGGAATGTGTTG+GGG | + | chr3_3:41953292-41953311 | Msa0452770:intron | 45.0% | |
| !! | GTGGTTTGCTCATTACAGGA+AGG | + | chr3_3:41953320-41953339 | Msa0452770:intron | 45.0% |
| TAGAAGGGTTCACCACTTTG+AGG | - | chr3_3:41953368-41953387 | None:intergenic | 45.0% | |
| ACCCTTCTAGCAAAGCACAT+TGG | + | chr3_3:41953379-41953398 | Msa0452770:intron | 45.0% | |
| CACCAATGTGCTTTGCTAGA+AGG | - | chr3_3:41953384-41953403 | None:intergenic | 45.0% | |
| CTTCTAGCAAAGCACATTGG+TGG | + | chr3_3:41953382-41953401 | Msa0452770:intron | 45.0% | |
| GGAAAAGATGGAGGCTCTTT+AGG | + | chr3_3:41953524-41953543 | Msa0452770:intron | 45.0% | |
| GTCGACAAGGAAACTCAGAA+AGG | - | chr3_3:41953669-41953688 | None:intergenic | 45.0% | |
| AAATCATGTGCTCAGGTGTC+TGG | - | chr3_3:41953696-41953715 | None:intergenic | 45.0% | |
| AGACACCTGAGCACATGATT+TGG | + | chr3_3:41953695-41953714 | Msa0452770:intron | 45.0% | |
| TTGGACCAAATCATGTGCTC+AGG | - | chr3_3:41953703-41953722 | None:intergenic | 45.0% | |
| TGGTCCAAACCTTCACATTG+AGG | + | chr3_3:41953715-41953734 | Msa0452770:intron | 45.0% | |
| GAAGCCTCAATGTGAAGGTT+TGG | - | chr3_3:41953722-41953741 | None:intergenic | 45.0% | |
| !!! | ATTTTGGAACATGTGGCTGC+TGG | + | chr3_3:41954055-41954074 | Msa0452770:three_prime_UTR | 45.0% |
| CACATGGAAACTTAGGGTCA+AGG | - | chr3_3:41954479-41954498 | None:intergenic | 45.0% | |
| !! | AATTAATAAATAATTAAGAA+GGG | - | chr3_3:41949768-41949787 | None:intergenic | 5.0% |
| !! | AAATTAATAAATAATTAAGA+AGG | - | chr3_3:41949769-41949788 | None:intergenic | 5.0% |
| !! | GTGATCACTGGTTCTGATGC+TGG | + | chr3_3:41950079-41950098 | Msa0452770:CDS | 50.0% |
| TGTTGATCTCTTGGGCCACT+AGG | + | chr3_3:41950497-41950516 | Msa0452770:CDS | 50.0% | |
| AGGAGCTTCAGCAATCCTAG+TGG | - | chr3_3:41950515-41950534 | None:intergenic | 50.0% | |
| GCGCGAGAAACTCATATGGT+GGG | - | chr3_3:41950775-41950794 | None:intergenic | 50.0% | |
| TTGCGCGCGAGAAACTCATA+TGG | - | chr3_3:41950779-41950798 | None:intergenic | 50.0% | |
| GTTACGACACTGTAGCGTAG+AGG | + | chr3_3:41951059-41951078 | Msa0452770:intron | 50.0% | |
| AATTGGACATGTCGCGGCTA+CGG | + | chr3_3:41951252-41951271 | Msa0452770:CDS | 50.0% | |
| !! | CGAGCCTGCTTTTAGTGTTC+TGG | + | chr3_3:41951324-41951343 | Msa0452770:CDS | 50.0% |
| CACACCCTTTGCAATTGCTG+TGG | + | chr3_3:41951905-41951924 | Msa0452770:intron | 50.0% | |
| CCCTTTGCAATTGCTGTGGA+AGG | + | chr3_3:41951909-41951928 | Msa0452770:intron | 50.0% | |
| TGTGGAAGGACCAGCAATGT+GGG | + | chr3_3:41951923-41951942 | Msa0452770:intron | 50.0% | |
| GACAGGACAGGAGTTCAACT+TGG | - | chr3_3:41952272-41952291 | None:intergenic | 50.0% | |
| TTGAGTAGTCTCGACAGGAC+AGG | - | chr3_3:41952284-41952303 | None:intergenic | 50.0% | |
| GCGCGTCATGGATAATCTCT+TGG | - | chr3_3:41952514-41952533 | None:intergenic | 50.0% | |
| AGATTATCCATGACGCGCGA+TGG | + | chr3_3:41952516-41952535 | Msa0452770:intron | 50.0% | |
| ! | AACCCAGGTACTTGATAGCC+AGG | - | chr3_3:41952542-41952561 | None:intergenic | 50.0% |
| TGGTAAATGTGCGCAACAGG+TGG | + | chr3_3:41952745-41952764 | Msa0452770:intron | 50.0% | |
| GGTAAATGTGCGCAACAGGT+GGG | + | chr3_3:41952746-41952765 | Msa0452770:intron | 50.0% | |
| !! | TGACGGGCTGAATTGGTGTA+TGG | - | chr3_3:41952908-41952927 | None:intergenic | 50.0% |
| !! | AGAGCATTGACGGGCTGAAT+TGG | - | chr3_3:41952915-41952934 | None:intergenic | 50.0% |
| ATTCAGCCCGTCAATGCTCT+TGG | + | chr3_3:41952915-41952934 | Msa0452770:CDS | 50.0% | |
| CGGGACCTTCTTATACTCTC+AGG | + | chr3_3:41952956-41952975 | Msa0452770:CDS | 50.0% | |
| ! | GGAATGTGTTGGGGTGTTTG+TGG | + | chr3_3:41953301-41953320 | Msa0452770:intron | 50.0% |
| CTAGCAAAGCACATTGGTGG+AGG | + | chr3_3:41953385-41953404 | Msa0452770:intron | 50.0% | |
| CAAAGCACATTGGTGGAGGA+AGG | + | chr3_3:41953389-41953408 | Msa0452770:intron | 50.0% | |
| GCAGTTTCCATGTAGGACCT+TGG | + | chr3_3:41953772-41953791 | Msa0452770:intron | 50.0% | |
| AGGTGCAGGAACACCTTCAG+AGG | + | chr3_3:41950327-41950346 | Msa0452770:CDS | 55.0% | |
| CGCGCGAGAAACTCATATGG+TGG | - | chr3_3:41950776-41950795 | None:intergenic | 55.0% | |
| GCGTGAGAAGCTCATAGGGT+GGG | + | chr3_3:41950879-41950898 | Msa0452770:intron | 55.0% | |
| CAGATAGACTGGCACAGGGA+AGG | - | chr3_3:41951374-41951393 | None:intergenic | 55.0% | |
| CTGTGGAAGGACCAGCAATG+TGG | + | chr3_3:41951922-41951941 | Msa0452770:intron | 55.0% | |
| TATCCAGCAGCCCACATTGC+TGG | - | chr3_3:41951936-41951955 | None:intergenic | 55.0% | |
| TGGCCTGGCTATCAAGTACC+TGG | + | chr3_3:41952536-41952555 | Msa0452770:intron | 55.0% | |
| GGCCTGGCTATCAAGTACCT+GGG | + | chr3_3:41952537-41952556 | Msa0452770:intron | 55.0% | |
| GGCTGGTAAATGTGCGCAAC+AGG | + | chr3_3:41952742-41952761 | Msa0452770:intron | 55.0% | |
| !! | TGCGGCTCCAAGAGCATTGA+CGG | - | chr3_3:41952925-41952944 | None:intergenic | 55.0% |
| GGAGCCGCAATTGCTGTCTT+CGG | + | chr3_3:41952936-41952955 | Msa0452770:CDS | 55.0% | |
| GAGCCGCAATTGCTGTCTTC+GGG | + | chr3_3:41952937-41952956 | Msa0452770:CDS | 55.0% | |
| GGTCCCGAAGACAGCAATTG+CGG | - | chr3_3:41952943-41952962 | None:intergenic | 55.0% | |
| CTCACGCGCCCTGAGCTATT+CGG | - | chr3_3:41950866-41950885 | None:intergenic | 60.0% | |
| AGGGCGCGTGAGAAGCTCAT+AGG | + | chr3_3:41950874-41950893 | Msa0452770:intron | 60.0% | |
| GGGCGCGTGAGAAGCTCATA+GGG | + | chr3_3:41950875-41950894 | Msa0452770:intron | 60.0% | |
| CGCGTGAGAAGCTCATAGGG+TGG | + | chr3_3:41950878-41950897 | Msa0452770:intron | 60.0% | |
| !! | GCGGCTCCAAGAGCATTGAC+GGG | - | chr3_3:41952924-41952943 | None:intergenic | 60.0% |
| GGTGTCTGGTGCAGTCGACA+AGG | - | chr3_3:41953682-41953701 | None:intergenic | 60.0% | |
| ! | GGACCAGCAATGTGGGCTGC+TGG | + | chr3_3:41951930-41951949 | Msa0452770:intron | 65.0% |
| ATCCATGACGCGCGATGGCC+TGG | + | chr3_3:41952521-41952540 | Msa0452770:intron | 65.0% | |
| AGCCAGGCCATCGCGCGTCA+TGG | - | chr3_3:41952526-41952545 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 41949708 | 41954622 | 41949708 | ID=Msa0452770;Name=Msa0452770 |
| chr3_3 | mRNA | 41949708 | 41954622 | 41949708 | ID=Msa0452770-mRNA-1;Parent=Msa0452770;Name=Msa0452770-mRNA-1;_AED=0.14;_eAED=0.14;_QI=58|0.42|0.25|0.87|0.28|0.25|8|637|346 |
| chr3_3 | exon | 41949708 | 41949715 | 41949708 | ID=Msa0452770-mRNA-1:exon:7647;Parent=Msa0452770-mRNA-1 |
| chr3_3 | exon | 41949999 | 41950180 | 41949999 | ID=Msa0452770-mRNA-1:exon:7648;Parent=Msa0452770-mRNA-1 |
| chr3_3 | exon | 41950199 | 41950405 | 41950199 | ID=Msa0452770-mRNA-1:exon:7649;Parent=Msa0452770-mRNA-1 |
| chr3_3 | exon | 41950430 | 41950570 | 41950430 | ID=Msa0452770-mRNA-1:exon:7650;Parent=Msa0452770-mRNA-1 |
| chr3_3 | exon | 41951235 | 41951460 | 41951235 | ID=Msa0452770-mRNA-1:exon:7651;Parent=Msa0452770-mRNA-1 |
| chr3_3 | exon | 41951772 | 41951923 | 41951772 | ID=Msa0452770-mRNA-1:exon:7652;Parent=Msa0452770-mRNA-1 |
| chr3_3 | exon | 41952807 | 41952977 | 41952807 | ID=Msa0452770-mRNA-1:exon:7653;Parent=Msa0452770-mRNA-1 |
| chr3_3 | exon | 41953974 | 41954622 | 41953974 | ID=Msa0452770-mRNA-1:exon:7654;Parent=Msa0452770-mRNA-1 |
| chr3_3 | five_prime_UTR | 41949708 | 41949715 | 41949708 | ID=Msa0452770-mRNA-1:five_prime_utr;Parent=Msa0452770-mRNA-1 |
| chr3_3 | five_prime_UTR | 41949999 | 41950048 | 41949999 | ID=Msa0452770-mRNA-1:five_prime_utr;Parent=Msa0452770-mRNA-1 |
| chr3_3 | CDS | 41950049 | 41950180 | 41950049 | ID=Msa0452770-mRNA-1:cds;Parent=Msa0452770-mRNA-1 |
| chr3_3 | CDS | 41950199 | 41950405 | 41950199 | ID=Msa0452770-mRNA-1:cds;Parent=Msa0452770-mRNA-1 |
| chr3_3 | CDS | 41950430 | 41950570 | 41950430 | ID=Msa0452770-mRNA-1:cds;Parent=Msa0452770-mRNA-1 |
| chr3_3 | CDS | 41951235 | 41951460 | 41951235 | ID=Msa0452770-mRNA-1:cds;Parent=Msa0452770-mRNA-1 |
| chr3_3 | CDS | 41951772 | 41951923 | 41951772 | ID=Msa0452770-mRNA-1:cds;Parent=Msa0452770-mRNA-1 |
| chr3_3 | CDS | 41952807 | 41952977 | 41952807 | ID=Msa0452770-mRNA-1:cds;Parent=Msa0452770-mRNA-1 |
| chr3_3 | CDS | 41953974 | 41953985 | 41953974 | ID=Msa0452770-mRNA-1:cds;Parent=Msa0452770-mRNA-1 |
| chr3_3 | three_prime_UTR | 41953986 | 41954622 | 41953986 | ID=Msa0452770-mRNA-1:three_prime_utr;Parent=Msa0452770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
