AlfalfaGEDB | Msa0397130

M. sativa cultivar zhongmu-4 / Msa0397130

KEGG: K15283
GO: GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005315 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006820 GO:0006996 GO:0007033 GO:0007275 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0008643 GO:0009536 GO:0009553 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010152 GO:0010154 GO:0015075 GO:0015120 GO:0015144 GO:0015152 GO:0015291 GO:0015318 GO:0015605 GO:0015711 GO:0015712 GO:0015713 GO:0015714 GO:0015717 GO:0015718 GO:0015748 GO:0015760 GO:0015849 GO:0016043 GO:0019904 GO:0021700 GO:0022414 GO:0022804 GO:0022857 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0034389 GO:0035436 GO:0042873 GO:0042879 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046942 GO:0046943 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0061458 GO:0071702 GO:0071840 GO:0071917 GO:0098656 GO:1901264 GO:1901505 GO:1903825 GO:1905039
PFAM: PF03151.19

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0397130	XP_003599946.1	99.554	224	1	0	6	229	178	401	2.85e-156	449

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0397130	sp\|Q94B38\|GPT2_ARATH	88.393	224	26	0	6	229	165	388	2.55e-139	398

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0397130	G7J1A0	99.554	224	1	0	6	229	178	401	1.36e-156	449

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0025570	Msa0397130	0.822749	2.005432e-53	-8.615850e-47
Msa0034100	Msa0397130	-0.820546	6.477575e-53	-8.615850e-47
Msa0059080	Msa0397130	0.820260	7.533405e-53	-8.615850e-47
Msa0073110	Msa0397130	0.824210	9.132369e-54	-8.615850e-47
Msa0092220	Msa0397130	0.812283	4.583220e-51	-8.615850e-47
Msa0101530	Msa0397130	0.836908	7.102326e-57	-8.615850e-47
Msa0110240	Msa0397130	0.816011	6.890054e-52	-8.615850e-47
Msa0121320	Msa0397130	0.820370	7.110068e-53	-8.615850e-47
Msa0128110	Msa0397130	-0.806886	6.615157e-50	-8.615850e-47
Msa0136180	Msa0397130	-0.801133	1.039596e-48	-8.615850e-47
Msa0139910	Msa0397130	0.801705	7.938349e-49	-8.615850e-47
Msa0166180	Msa0397130	0.818907	1.534318e-52	-8.615850e-47
Msa0379480	Msa0397130	0.821467	3.975120e-53	-8.615850e-47
Msa0384590	Msa0397130	0.825076	5.709595e-54	-8.615850e-47
Msa0397130	Msa0412580	-0.801857	7.388500e-49	-8.615850e-47
Msa0397130	Msa0422070	0.804167	2.459920e-49	-8.615850e-47
Msa0397130	Msa0434660	0.817093	3.943227e-52	-8.615850e-47
Msa0397130	Msa0452770	0.889047	3.435450e-73	-8.615850e-47
Msa0397130	Msa0456450	-0.806655	7.403411e-50	-8.615850e-47
Msa0397130	Msa0457070	-0.807890	4.052638e-50	-8.615850e-47
Msa0397130	Msa0468660	0.802819	4.680490e-49	-8.615850e-47
Msa0397130	Msa0491960	0.801074	1.069102e-48	-8.615850e-47
Msa0397130	Msa0501080	0.806931	6.473752e-50	-8.615850e-47
Msa0397130	Msa0514540	0.809682	1.676910e-50	-8.615850e-47
Msa0397130	Msa0522540	0.824621	7.308714e-54	-8.615850e-47
Msa0397130	Msa0526150	0.801250	9.839102e-49	-8.615850e-47
Msa0397130	Msa0538050	-0.803716	3.052349e-49	-8.615850e-47
Msa0397130	Msa0563440	0.818408	1.991351e-52	-8.615850e-47
Msa0397130	Msa0569580	-0.816141	6.444852e-52	-8.615850e-47
Msa0397130	Msa0579080	0.812802	3.529598e-51	-8.615850e-47
Msa0397130	Msa0579160	0.808216	3.453387e-50	-8.615850e-47
Msa0397130	Msa0579220	0.807095	5.974614e-50	-8.615850e-47
Msa0397130	Msa0588040	0.800399	1.467809e-48	-8.615850e-47
Msa0397130	Msa0590620	-0.827674	1.373500e-54	-8.615850e-47
Msa0397130	Msa0591840	-0.803494	3.393253e-49	-8.615850e-47
Msa0397130	Msa0606600	0.846455	2.148759e-59	-8.615850e-47
Msa0397130	Msa0610240	-0.806229	9.104881e-50	-8.615850e-47
Msa0397130	Msa0610690	0.809241	2.085123e-50	-8.615850e-47
Msa0397130	Msa0621670	-0.803337	3.657954e-49	-8.615850e-47
Msa0397130	Msa0638300	-0.805453	1.325041e-49	-8.615850e-47
Msa0397130	Msa0647300	0.847971	8.247683e-60	-8.615850e-47
Msa0397130	Msa0651870	0.807709	4.428300e-50	-8.615850e-47
Msa0397130	Msa0651890	0.809089	2.247949e-50	-8.615850e-47
Msa0397130	Msa0658120	0.814461	1.522711e-51	-8.615850e-47
Msa0397130	Msa0680460	0.805312	1.418299e-49	-8.615850e-47
Msa0397130	Msa0686830	0.849971	2.294729e-60	-8.615850e-47
Msa0397130	Msa0703430	-0.807362	5.244985e-50	-8.615850e-47
Msa0397130	Msa0707860	-0.800061	1.719495e-48	-8.615850e-47
Msa0397130	Msa0708680	0.800462	1.424932e-48	-8.615850e-47
Msa0397130	Msa0742370	-0.823473	1.359056e-53	-8.615850e-47
Msa0397130	Msa0769910	-0.815047	1.128925e-51	-8.615850e-47
Msa0397130	Msa0774360	-0.805367	1.381214e-49	-8.615850e-47
Msa0397130	Msa0779450	-0.815195	1.046993e-51	-8.615850e-47
Msa0397130	Msa0805390	0.806026	1.004515e-49	-8.615850e-47
Msa0397130	Msa0812020	-0.802527	5.377494e-49	-8.615850e-47
Msa0397130	Msa0829250	-0.800536	1.376423e-48	-8.615850e-47
Msa0397130	Msa0841670	0.800009	1.762167e-48	-8.615850e-47
Msa0397130	Msa0862480	-0.810442	1.150560e-50	-8.615850e-47
Msa0397130	Msa0900830	0.804504	2.092466e-49	-8.615850e-47
Msa0397130	Msa0925630	-0.821559	3.786167e-53	-8.615850e-47
Msa0397130	Msa0931550	-0.813935	1.989178e-51	-8.615850e-47
Msa0397130	Msa0998660	-0.814268	1.679945e-51	-8.615850e-47
Msa0397130	Msa1045870	0.812555	3.996525e-51	-8.615850e-47
Msa0397130	Msa1046880	0.803697	3.080033e-49	-8.615850e-47
Msa0397130	Msa1047300	0.820350	7.183806e-53	-8.615850e-47
Msa0397130	Msa1047340	0.819069	1.409225e-52	-8.615850e-47
Msa0397130	Msa1055520	-0.820217	7.709621e-53	-8.615850e-47
Msa0397130	Msa1056890	0.807489	4.929647e-50	-8.615850e-47
Msa0397130	Msa1061780	0.803338	3.655520e-49	-8.615850e-47
Msa0397130	Msa1070630	-0.823520	1.325535e-53	-8.615850e-47
Msa0397130	Msa1074560	0.801766	7.710920e-49	-8.615850e-47
Msa0397130	Msa1078590	-0.800696	1.276835e-48	-8.615850e-47
Msa0397130	Msa1078760	-0.801158	1.027336e-48	-8.615850e-47
Msa0397130	Msa1087420	0.815544	8.757065e-52	-8.615850e-47
Msa0397130	Msa1088400	-0.826444	2.703391e-54	-8.615850e-47
Msa0397130	Msa1094810	0.840292	9.494669e-58	-8.615850e-47
Msa0397130	Msa1107330	0.810617	1.054644e-50	-8.615850e-47
Msa0397130	Msa1133750	0.810022	1.416925e-50	-8.615850e-47
Msa0397130	Msa1143490	0.806490	8.021729e-50	-8.615850e-47
Msa0397130	Msa1146980	0.840229	9.860068e-58	-8.615850e-47
Msa0397130	Msa1158450	-0.814229	1.713842e-51	-8.615850e-47
Msa0397130	Msa1165460	0.807684	4.482948e-50	-8.615850e-47
Msa0397130	Msa1184680	0.841019	6.122698e-58	-8.615850e-47
Msa0397130	Msa1191530	-0.800185	1.623033e-48	-8.615850e-47
Msa0397130	Msa1193940	0.810087	1.372051e-50	-8.615850e-47
Msa0397130	Msa1197720	0.803674	3.115080e-49	-8.615850e-47
Msa0397130	Msa1202470	0.822509	2.281099e-53	-8.615850e-47
Msa0397130	Msa1203650	0.830877	2.292843e-55	-8.615850e-47
Msa0397130	Msa1205270	-0.803012	4.270480e-49	-8.615850e-47
Msa0397130	Msa1221270	0.804677	1.926114e-49	-8.615850e-47
Msa0397130	Msa1230560	0.804764	1.846861e-49	-8.615850e-47
Msa0397130	Msa1254910	0.824697	7.012398e-54	-8.615850e-47
Msa0397130	Msa1284020	0.800785	1.224333e-48	-8.615850e-47
Msa0397130	Msa1319190	0.801490	8.786869e-49	-8.615850e-47
Msa0397130	Msa1322500	0.806760	7.033630e-50	-8.615850e-47
Msa0397130	Msa1323070	0.804985	1.660733e-49	-8.615850e-47
Msa0397130	Msa1342360	-0.805974	1.029928e-49	-8.615850e-47
Msa0397130	Msa1361980	0.837391	5.342730e-57	-8.615850e-47
Msa0397130	Msa1377980	-0.812063	5.119775e-51	-8.615850e-47
Msa0397130	Msa1380740	0.832548	8.875755e-56	-8.615850e-47
Msa0397130	Msa1380790	0.800211	1.602957e-48	-8.615850e-47
Msa0397130	Msa1384410	-0.803125	4.046091e-49	-8.615850e-47
Msa0397130	Msa1384700	0.813920	2.004497e-51	-8.615850e-47
Msa0397130	Msa1400290	-0.820432	6.882017e-53	-8.615850e-47
Msa0397130	Msa1403660	0.802037	6.785486e-49	-8.615850e-47
Msa0397130	Msa1408280	-0.810280	1.246519e-50	-8.615850e-47
Msa0397130	Msa1429810	0.802555	5.306667e-49	-8.615850e-47
Msa0397130	Msa1434300	0.800084	1.701545e-48	-8.615850e-47
Msa0397130	Msa1462780	0.800765	1.235948e-48	-8.615850e-47
Msa0251920	Msa0397130	0.819028	1.440261e-52	-8.615850e-47
Msa0258740	Msa0397130	0.817912	2.577441e-52	-8.615850e-47
Msa0266140	Msa0397130	-0.815131	1.081958e-51	-8.615850e-47
Msa0303900	Msa0397130	0.820043	8.447343e-53	-8.615850e-47
Msa0304060	Msa0397130	-0.816852	4.465511e-52	-8.615850e-47
Msa0311540	Msa0397130	0.812409	4.301100e-51	-8.615850e-47
Msa0333770	Msa0397130	0.811531	6.681056e-51	-8.615850e-47
Msa0354550	Msa0397130	0.803505	3.376161e-49	-8.615850e-47
Msa0358470	Msa0397130	0.961206	1.960225e-119	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0397130	MtrunA17_Chr3g0097931	99.554	224	1	0	6	229	178	401	2.62e-160	449
Msa0397130	MtrunA17_Chr2g0288011	88.393	224	26	0	6	229	172	395	1.95e-138	393
Msa0397130	MtrunA17_Chr4g0074541	89.732	224	23	0	6	229	169	392	1.46e-133	381
Msa0397130	MtrunA17_Chr2g0291851	58.296	223	88	4	7	226	172	392	1.48e-77	239
Msa0397130	MtrunA17_Chr4g0046561	45.575	226	114	3	4	225	165	385	2.18e-60	194
Msa0397130	MtrunA17_Chr5g0419001	43.172	227	120	4	6	228	172	393	7.42e-58	188
Msa0397130	MtrunA17_Chr4g0058971	44.690	226	122	2	6	229	153	377	4.67e-56	183
Msa0397130	MtrunA17_Chr6g0449891	46.957	230	118	3	4	229	179	408	1.72e-52	174
Msa0397130	MtrunA17_Chr3g0117501	45.815	227	118	4	6	229	178	402	4.83e-49	165
Msa0397130	MtrunA17_Chr3g0114581	27.273	231	139	4	12	229	93	307	1.35e-17	80.1
Msa0397130	MtrunA17_Chr1g0160071	27.706	231	138	4	12	229	92	306	1.74e-17	80.1
Msa0397130	MtrunA17_Chr3g0112981	25.000	220	154	5	15	229	106	319	1.32e-15	74.3
Msa0397130	MtrunA17_Chr4g0008071	22.581	217	163	2	15	229	94	307	2.76e-14	70.5
Msa0397130	MtrunA17_Chr5g0436341	25.000	220	154	5	15	229	90	303	1.71e-13	68.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0397130	AT1G61800.1	88.393	224	26	0	6	229	165	388	2.59e-140	398
Msa0397130	AT5G54800.1	89.686	223	23	0	6	228	165	387	1.80e-139	396
Msa0397130	AT1G61800.2	87.054	224	29	0	6	229	165	388	5.42e-138	393
Msa0397130	AT5G17630.1	58.590	227	89	4	4	227	178	402	6.54e-89	268
Msa0397130	AT4G03950.1	55.263	228	59	6	6	229	66	254	1.71e-67	209
Msa0397130	AT5G46110.2	44.978	229	117	4	4	228	61	284	3.95e-60	191
Msa0397130	AT5G46110.1	44.978	229	117	4	4	228	174	397	6.84e-59	191
Msa0397130	AT5G46110.4	44.978	229	117	4	4	228	174	397	7.30e-59	191
Msa0397130	AT5G46110.3	43.231	229	110	5	4	228	174	386	3.33e-54	179
Msa0397130	AT3G01550.1	42.358	229	129	2	4	229	145	373	5.85e-49	165
Msa0397130	AT5G33320.1	43.860	228	123	4	4	228	174	399	3.36e-46	158
Msa0397130	AT3G01550.2	41.048	229	127	3	4	229	145	368	1.35e-44	153
Msa0397130	AT1G77610.1	28.509	228	140	3	12	229	87	301	1.01e-17	80.9
Msa0397130	AT1G21870.1	26.697	221	153	3	12	229	93	307	1.94e-17	80.1
Msa0397130	AT1G12500.1	25.229	218	156	4	15	229	140	353	3.77e-15	73.9
Msa0397130	AT5G05820.1	24.771	218	157	4	15	229	92	305	6.27e-15	72.8
Msa0397130	AT3G11320.1	24.771	218	157	4	15	229	92	305	3.14e-14	70.9

Find 91 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAAACTTACAAGGTTATTT+TGG	0.142421	3_2:-16094528	Msa0397130:three_prime_UTR
AAATGATTGGTTGTTGTTTA+AGG	0.157403	3_2:-16093103	Msa0397130:three_prime_UTR
CCGCAACATCTTCTCGAAAA+AGG	0.198188	3_2:-16096795	Msa0397130:CDS
TTCTTTGATGTTTCAACTTC+AGG	0.199166	3_2:-16097395	None:intergenic
CAAAACATTGTTTACTATAA+AGG	0.218132	3_2:-16094300	Msa0397130:three_prime_UTR
TAAATTTCCCTTTGATTGTT+TGG	0.232874	3_2:+16093205	None:intergenic
AAAACAGCTCTCGCTGAAAT+TGG	0.253490	3_2:-16096650	Msa0397130:CDS
TAAAGCTAAATTTGTCTGTT+TGG	0.293412	3_2:-16093512	Msa0397130:three_prime_UTR
TTCTCTTCAGTGTGATTGTT+TGG	0.305180	3_2:-16093910	Msa0397130:three_prime_UTR
ATAGACATTAGAATGAAAAT+TGG	0.311404	3_2:-16093703	Msa0397130:three_prime_UTR
TCTGGTTTCGAGATTTATCT+TGG	0.313532	3_2:-16097266	Msa0397130:CDS
CTGTCTTTAGTTCCAATCAT+TGG	0.330191	3_2:-16097217	Msa0397130:CDS
AAATTGGACCTCAATTCTTA+TGG	0.330887	3_2:-16096634	Msa0397130:intron
AGACTCCTTGCCACTACTTC+AGG	0.340374	3_2:+16093625	None:intergenic
GGAGCCGCAATTGCTGTCTT+CGG	0.341789	3_2:-16095681	Msa0397130:CDS
TATGACAGATATACGTTTCA+TGG	0.344750	3_2:+16095755	None:intergenic
GTTTCCAATGCTAAATGTTA+AGG	0.346594	3_2:+16095779	None:intergenic
GAGCCGCAATTGCTGTCTTC+GGG	0.355259	3_2:-16095680	Msa0397130:CDS
AAAACATTTATCAAAGAAAC+TGG	0.363908	3_2:+16093931	None:intergenic
CAAAGTTCACATGGAAACTT+AGG	0.369914	3_2:+16094081	None:intergenic
AAATTAGATAAAACTGTAAA+AGG	0.374951	3_2:-16093426	Msa0397130:three_prime_UTR
GTCTGTAGTCTAATGATTAG+AGG	0.375614	3_2:-16093255	Msa0397130:three_prime_UTR
AGAGCATTGACGGGCTGAAT+TGG	0.376700	3_2:+16095705	None:intergenic
GAGCTCAATTTCAATATGAT+TGG	0.383141	3_2:-16097169	Msa0397130:intron
TATCCAGCAGCCCACATTGC+TGG	0.395472	3_2:+16096674	None:intergenic
GTTGCTGTTGCACACACAAT+TGG	0.398110	3_2:-16097373	Msa0397130:CDS
TATTCTCAGCCTCTATAAAC+AGG	0.409257	3_2:+16094332	None:intergenic
AAACAATAGAATTTGCTAAC+AGG	0.409392	3_2:-16094590	Msa0397130:exon
CTGTCATTCTCAAACTTACA+AGG	0.413353	3_2:-16094537	Msa0397130:three_prime_UTR
TGAGCTTTGTATGTTATGTT+TGG	0.413684	3_2:-16094168	Msa0397130:three_prime_UTR
ATAAATGTTCCTGTTTATAG+AGG	0.426620	3_2:-16094341	Msa0397130:three_prime_UTR
TTTAATTACCATAAGAATTG+AGG	0.427313	3_2:+16096626	None:intergenic
TTTCCAATGCTAAATGTTAA+GGG	0.432602	3_2:+16095780	None:intergenic
TTAGACTACAGACTATTCTA+TGG	0.436771	3_2:+16093265	None:intergenic
ATTCAGCCCGTCAATGCTCT+TGG	0.442993	3_2:-16095702	Msa0397130:CDS
TGCGGCTCCAAGAGCATTGA+CGG	0.448915	3_2:+16095695	None:intergenic
TCTTTAGTTCCAATCATTGG+TGG	0.450678	3_2:-16097214	Msa0397130:CDS
GGACCAGCAATGTGGGCTGC+TGG	0.453634	3_2:-16096677	Msa0397130:CDS
TTATGATAATGTTTCTCAGC+AGG	0.455058	3_2:+16094421	None:intergenic
TTTGTAAGACTAGGATGATC+CGG	0.455275	3_2:-16094486	Msa0397130:three_prime_UTR
TGTAAACGATACAGCAACTT+TGG	0.463223	3_2:+16097324	None:intergenic
ATTCTATCATCTATACAATC+AGG	0.464239	3_2:-16095832	Msa0397130:CDS
AGTGCACATCCACCAATGAT+TGG	0.466284	3_2:+16097205	None:intergenic
CTGGTTTCGAGATTTATCTT+GGG	0.470237	3_2:-16097265	Msa0397130:CDS
ATGCATTTATCAACAAGAAA+AGG	0.477168	3_2:+16094013	None:intergenic
TTTAATTTCTGCAATGCCAA+TGG	0.477981	3_2:-16094370	Msa0397130:three_prime_UTR
AATTGGACATGTCGCGGCTA+CGG	0.479497	3_2:-16097356	Msa0397130:CDS
CACTACTTCAGGTGTGTACA+AGG	0.494787	3_2:+16093636	None:intergenic
GAACATTTATTTCAATCCAT+TGG	0.495728	3_2:+16094354	None:intergenic
ATGAAGGGAAAGTCTGTTAG+TGG	0.498113	3_2:-16096770	Msa0397130:CDS
GTTTCTTTGTTTGCTGACAT+TGG	0.498564	3_2:-16094218	Msa0397130:three_prime_UTR
ACTGTATACCAAACAATCAA+AGG	0.502957	3_2:-16093213	Msa0397130:three_prime_UTR
CGGGACCTTCTTATACTCTC+AGG	0.506019	3_2:-16095661	Msa0397130:intron
TCACATGGAAACTTAGGGTC+AGG	0.509767	3_2:+16094087	None:intergenic
GAAGTAGTGGCAAGGAGTCT+AGG	0.511281	3_2:-16093622	Msa0397130:three_prime_UTR
TCTCCCTTAACATTTAGCAT+TGG	0.512173	3_2:-16095783	Msa0397130:CDS
AAAGACAGATAGACTGGCAC+AGG	0.513511	3_2:+16097232	None:intergenic
TTCCATGGAAAACAAGACAT+TGG	0.514648	3_2:+16093773	None:intergenic
AAACTCAATACAAATTTCCA+TGG	0.518658	3_2:+16093758	None:intergenic
CTGTATACCAAACAATCAAA+GGG	0.527736	3_2:-16093212	Msa0397130:three_prime_UTR
TGACGGGCTGAATTGGTGTA+TGG	0.536988	3_2:+16095712	None:intergenic
TTGCTAACAGGAAATCTTCG+AGG	0.540119	3_2:-16094578	Msa0397130:three_prime_UTR
ATTAGAATGAAAATTGGAGT+TGG	0.541056	3_2:-16093697	Msa0397130:three_prime_UTR
CCCTTTGCAATTGCTGTCGA+AGG	0.541805	3_2:-16096698	Msa0397130:CDS
CTTGTACACACCTGAAGTAG+TGG	0.553343	3_2:-16093635	Msa0397130:three_prime_UTR
TGCTAACAGGAAATCTTCGA+GGG	0.555074	3_2:-16094577	Msa0397130:three_prime_UTR
CCTTCGACAGCAATTGCAAA+GGG	0.556720	3_2:+16096698	None:intergenic
TCAGGTGTCTTACATGTCGT+TGG	0.558309	3_2:-16095814	Msa0397130:CDS
GGAACTAAAGACAGATAGAC+TGG	0.559770	3_2:+16097226	None:intergenic
TATCTACATGCACTAAAAGC+CGG	0.559847	3_2:+16094467	None:intergenic
TGAAGGCACATACAAATGAA+AGG	0.561521	3_2:+16094110	None:intergenic
GAAGGCACATACAAATGAAA+GGG	0.565795	3_2:+16094111	None:intergenic
TTCACAAGACAAAGTTCACA+TGG	0.576183	3_2:+16094072	None:intergenic
CAGATAGACTGGCACAGGGA+AGG	0.585869	3_2:+16097237	None:intergenic
AAAGTTCACATGGAAACTTA+GGG	0.589595	3_2:+16094082	None:intergenic
GGTCCCGAAGACAGCAATTG+CGG	0.591919	3_2:+16095677	None:intergenic
AAGTACCTGAGAGTATAAGA+AGG	0.598923	3_2:+16095656	None:intergenic
CAAAGGGTGTGAGAATTGCA+AGG	0.600027	3_2:+16096714	None:intergenic
TCCTTCGACAGCAATTGCAA+AGG	0.601626	3_2:+16096697	None:intergenic
GCGGCTCCAAGAGCATTGAC+GGG	0.602591	3_2:+16095696	None:intergenic
GAAACCAGAACACTAAAAGC+AGG	0.604333	3_2:+16097280	None:intergenic
TTTACACATATCATCAAGAG+TGG	0.634575	3_2:-16097307	Msa0397130:CDS
CTGTCGAAGGACCAGCAATG+TGG	0.644464	3_2:-16096685	Msa0397130:CDS
GAAATTTAGAGATAATAAGT+CGG	0.652322	3_2:-16093190	Msa0397130:three_prime_UTR
GGAAACTTAGGGTCAGGTGA+AGG	0.653580	3_2:+16094093	None:intergenic
TGTCGAAGGACCAGCAATGT+GGG	0.656889	3_2:-16096684	Msa0397130:CDS
ACACACAATTGGACATGTCG+CGG	0.658566	3_2:-16097362	Msa0397130:CDS
AAAGGGTGTGAGAATTGCAA+GGG	0.680969	3_2:+16096715	None:intergenic
ACACACCTGAAGTAGTGGCA+AGG	0.685885	3_2:-16093630	Msa0397130:three_prime_UTR
ATGTTATGTTTGGAAGACAG+AGG	0.719995	3_2:-16094158	Msa0397130:three_prime_UTR
AAGACAGATAGACTGGCACA+GGG	0.744929	3_2:+16097233	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTACAAATAACATTTTTAAT+TGG	-	chr3_2:16095775-16095794	Msa0397130:CDS	10.0%
!!	AAATTAAAGCTAAAAATAAA+AGG	-	chr3_2:16096884-16096903	Msa0397130:intron	10.0%
!!	AAAAAAAAACAGCATTAAAT+AGG	+	chr3_2:16096185-16096204	None:intergenic	15.0%
!!	TCGATTTCAAAAAATAATTT+AGG	-	chr3_2:16096607-16096626	Msa0397130:intron	15.0%
!!	TTTCAAAAAATAATTTAGGA+AGG	-	chr3_2:16096611-16096630	Msa0397130:intron	15.0%
!!	AAATTAGATAAAACTGTAAA+AGG	-	chr3_2:16097001-16097020	Msa0397130:intron	15.0%
!!!	TATTTTGTTTTTACGTTGTT+TGG	-	chr3_2:16093304-16093323	Msa0397130:three_prime_UTR	20.0%
!!	ATAATCTGTGTTTGATTAAT+TGG	-	chr3_2:16093396-16093415	Msa0397130:three_prime_UTR	20.0%
!!	TAATCTGTGTTTGATTAATT+GGG	-	chr3_2:16093397-16093416	Msa0397130:three_prime_UTR	20.0%
!!	AGTCAATGAAATCAAAATTA+GGG	+	chr3_2:16093551-16093570	None:intergenic	20.0%
!!	AAGTCAATGAAATCAAAATT+AGG	+	chr3_2:16093552-16093571	None:intergenic	20.0%
!!	TTTAATTACCATAAGAATTG+AGG	+	chr3_2:16093804-16093823	None:intergenic	20.0%
!!!	AGATCGTGAATTTTTTTTAA+AGG	+	chr3_2:16093915-16093934	None:intergenic	20.0%
!!!	AAAATTCACGATCTTTTATT+AGG	-	chr3_2:16093921-16093940	Msa0397130:three_prime_UTR	20.0%
!!!	GCAACTAAAGAATTTAAAAT+TGG	+	chr3_2:16094246-16094265	None:intergenic	20.0%
!!!	ATTTTAAATTCTTTAGTTGC+AGG	-	chr3_2:16094246-16094265	Msa0397130:three_prime_UTR	20.0%
!!!	AGTTAATGTTGTTTAAATGA+TGG	-	chr3_2:16094381-16094400	Msa0397130:three_prime_UTR	20.0%
!!	AAAAAAATTATTCATGAACG+AGG	+	chr3_2:16094418-16094437	None:intergenic	20.0%
!!!	TTTTTTTTTCTTGTTCTGAT+TGG	-	chr3_2:16094458-16094477	Msa0397130:three_prime_UTR	20.0%
!!!	TTTTTTTTCTTGTTCTGATT+GGG	-	chr3_2:16094459-16094478	Msa0397130:three_prime_UTR	20.0%
!!	AATAATATGAAGCACAATTA+AGG	+	chr3_2:16095067-16095086	None:intergenic	20.0%
!!	TTAATTGTGCTTCATATTAT+TGG	-	chr3_2:16095066-16095085	Msa0397130:intron	20.0%
!!	ATTCATTGTCTTTATGAAAA+GGG	-	chr3_2:16095271-16095290	Msa0397130:intron	20.0%
!!!	TTCTTTTTCTATATTTTCCA+AGG	+	chr3_2:16095601-16095620	None:intergenic	20.0%
!!	TTGGAAAATATAGAAAAAGA+AGG	-	chr3_2:16095600-16095619	Msa0397130:intron	20.0%
!!	TGGAAAATATAGAAAAAGAA+GGG	-	chr3_2:16095601-16095620	Msa0397130:intron	20.0%
!!	CAAAACATTGTTTACTATAA+AGG	-	chr3_2:16096127-16096146	Msa0397130:intron	20.0%
!!!	AACTTTTCACTTTTCTAAAA+GGG	-	chr3_2:16096384-16096403	Msa0397130:intron	20.0%
!!	AAAACATTTATCAAAGAAAC+TGG	+	chr3_2:16096499-16096518	None:intergenic	20.0%
!!!	GTGATTTTGATTTGATTAAT+TGG	+	chr3_2:16096544-16096563	None:intergenic	20.0%
!!	ATAGACATTAGAATGAAAAT+TGG	-	chr3_2:16096724-16096743	Msa0397130:CDS	20.0%
!!	TTTCAATACCATAAAAAACT+AGG	+	chr3_2:16096855-16096874	None:intergenic	20.0%
!!!	TTATTCTTTTTTAGCTCAAA+AGG	-	chr3_2:16096941-16096960	Msa0397130:intron	20.0%
!!	GAAATTTAGAGATAATAAGT+CGG	-	chr3_2:16097237-16097256	Msa0397130:CDS	20.0%
!!!	TATCTATTACATCACATTTT+TGG	-	chr3_2:16097267-16097286	Msa0397130:CDS	20.0%
!!	TCACTTAATAGAAAAATGAT+TGG	-	chr3_2:16097311-16097330	Msa0397130:CDS	20.0%
!!	ACTAGAATTTTGAATGTGAA+TGG	-	chr3_2:16093360-16093379	Msa0397130:three_prime_UTR	25.0%
!	GTCAATGAAATCAAAATTAG+GGG	+	chr3_2:16093550-16093569	None:intergenic	25.0%
!	TAACTATTATATCAGTCTTC+TGG	-	chr3_2:16093950-16093969	Msa0397130:three_prime_UTR	25.0%
!	CATAATATCAATATGGTGAA+AGG	-	chr3_2:16094047-16094066	Msa0397130:three_prime_UTR	25.0%
!	TCTTACAACCAAACAATAAA+CGG	+	chr3_2:16094501-16094520	None:intergenic	25.0%
!	TCCATATTATGACTAAAGTA+TGG	-	chr3_2:16094531-16094550	Msa0397130:three_prime_UTR	25.0%
!	ATTCTATCATCTATACAATC+AGG	-	chr3_2:16094595-16094614	Msa0397130:exon	25.0%
!	TTTCCAATGCTAAATGTTAA+GGG	+	chr3_2:16094650-16094669	None:intergenic	25.0%
!	TGATGAATAATATGAGTAGA+GGG	+	chr3_2:16095007-16095026	None:intergenic	25.0%
!	ATGATGAATAATATGAGTAG+AGG	+	chr3_2:16095008-16095027	None:intergenic	25.0%
!	CTACTCATATTATTCATCAT+CGG	-	chr3_2:16095008-16095027	Msa0397130:intron	25.0%
!	ACAGGAAGGAAAAAAAAAAT+AGG	-	chr3_2:16095144-16095163	Msa0397130:intron	25.0%
!	CATTCATTGTCTTTATGAAA+AGG	-	chr3_2:16095270-16095289	Msa0397130:intron	25.0%
!	AAGTCAACAAGAGTTTATTA+TGG	-	chr3_2:16095312-16095331	Msa0397130:intron	25.0%
!	AGAGTTTATTATGGAAAAGA+TGG	-	chr3_2:16095321-16095340	Msa0397130:intron	25.0%
!!!	AAACAATAGAATTTGCTAAC+AGG	-	chr3_2:16095837-16095856	Msa0397130:CDS	25.0%
!!	TCAAACTTACAAGGTTATTT+TGG	-	chr3_2:16095899-16095918	Msa0397130:intron	25.0%
!	GAACATTTATTTCAATCCAT+TGG	+	chr3_2:16096076-16096095	None:intergenic	25.0%
!	ATAAATGTTCCTGTTTATAG+AGG	-	chr3_2:16096086-16096105	Msa0397130:intron	25.0%
!!!	CAACTTTTCACTTTTCTAAA+AGG	-	chr3_2:16096383-16096402	Msa0397130:intron	25.0%
!	ATGCATTTATCAACAAGAAA+AGG	+	chr3_2:16096417-16096436	None:intergenic	25.0%
!	AAACTCAATACAAATTTCCA+TGG	+	chr3_2:16096672-16096691	None:intergenic	25.0%
!!	TTTTGTAACAAAGATAAGCT+AGG	-	chr3_2:16096689-16096708	Msa0397130:CDS	25.0%
!	ATTAGAATGAAAATTGGAGT+TGG	-	chr3_2:16096730-16096749	Msa0397130:CDS	25.0%
!!!	ACATTTGACCTAGTTTTTTA+TGG	-	chr3_2:16096844-16096863	Msa0397130:intron	25.0%
!	TAAAGCTAAATTTGTCTGTT+TGG	-	chr3_2:16096915-16096934	Msa0397130:intron	25.0%
!	GAGAAGTCAAAAATAAAGTT+AGG	-	chr3_2:16097130-16097149	Msa0397130:intron	25.0%
!	TAAATTTCCCTTTGATTGTT+TGG	+	chr3_2:16097225-16097244	None:intergenic	25.0%
!!!	AAATGATTGGTTGTTGTTTA+AGG	-	chr3_2:16097324-16097343	Msa0397130:CDS	25.0%
	TTTACACATATCATCAAGAG+TGG	-	chr3_2:16093120-16093139	Msa0397130:three_prime_UTR	30.0%
	GAGCTCAATTTCAATATGAT+TGG	-	chr3_2:16093258-16093277	Msa0397130:three_prime_UTR	30.0%
	CCAAAAAAATGCAAAACTAC+TGG	+	chr3_2:16093425-16093444	None:intergenic	30.0%
!!	CCAGTAGTTTTGCATTTTTT+TGG	-	chr3_2:16093422-16093441	Msa0397130:three_prime_UTR	30.0%
!!!	CATTTTTTTGGCTAGTAATC+TGG	-	chr3_2:16093434-16093453	Msa0397130:three_prime_UTR	30.0%
	ATTACAAGAAACATGTTCGT+TGG	+	chr3_2:16093500-16093519	None:intergenic	30.0%
!!!	TTTTTTTCCTTCCCTTTTTC+AGG	-	chr3_2:16093570-16093589	Msa0397130:three_prime_UTR	30.0%
!!!	TTCCCTTTTTCAGGTTTTAT+GGG	-	chr3_2:16093579-16093598	Msa0397130:three_prime_UTR	30.0%
	AAATTGGACCTCAATTCTTA+TGG	-	chr3_2:16093793-16093812	Msa0397130:three_prime_UTR	30.0%
	CGATGACAACAAACATAATA+GGG	+	chr3_2:16093852-16093871	None:intergenic	30.0%
	ACGATGACAACAAACATAAT+AGG	+	chr3_2:16093853-16093872	None:intergenic	30.0%
	GTCGAATGAATCAATGATTT+AGG	+	chr3_2:16094014-16094033	None:intergenic	30.0%
	ATTGATATTATGCGTGTCTT+TGG	+	chr3_2:16094039-16094058	None:intergenic	30.0%
	AGACACGCATAATATCAATA+TGG	-	chr3_2:16094040-16094059	Msa0397130:three_prime_UTR	30.0%
!!!	TGTCCATCCTTATTTTGATT+TGG	-	chr3_2:16094291-16094310	Msa0397130:three_prime_UTR	30.0%
!!!	GTCCATCCTTATTTTGATTT+GGG	-	chr3_2:16094292-16094311	Msa0397130:three_prime_UTR	30.0%
	TCAAGTCCCAAATCAAAATA+AGG	+	chr3_2:16094301-16094320	None:intergenic	30.0%
	ACATTAACTCATAAAAACCC+AGG	+	chr3_2:16094370-16094389	None:intergenic	30.0%
	ACTTTAGTCATAATATGGAG+AGG	+	chr3_2:16094530-16094549	None:intergenic	30.0%
	GCCATACTTTAGTCATAATA+TGG	+	chr3_2:16094535-16094554	None:intergenic	30.0%
	TATTATGACTAAAGTATGGC+TGG	-	chr3_2:16094535-16094554	Msa0397130:three_prime_UTR	30.0%
	GTTTCCAATGCTAAATGTTA+AGG	+	chr3_2:16094651-16094670	None:intergenic	30.0%
	TATGACAGATATACGTTTCA+TGG	+	chr3_2:16094675-16094694	None:intergenic	30.0%
	TATTACTGTTACTACATGTC+AGG	-	chr3_2:16094935-16094954	Msa0397130:intron	30.0%
	ATTACTGTTACTACATGTCA+GGG	-	chr3_2:16094936-16094955	Msa0397130:intron	30.0%
!!!	GGCATTTTTTTTTCTTTCTC+TGG	-	chr3_2:16095219-16095238	Msa0397130:intron	30.0%
!	TGAATGAGTTTGAAATCCTA+TGG	+	chr3_2:16095256-16095275	None:intergenic	30.0%
	TTGTCTTTATGAAAAGGGTT+TGG	-	chr3_2:16095276-16095295	Msa0397130:intron	30.0%
	GTTTATTATGGAAAAGATGG+AGG	-	chr3_2:16095324-16095343	Msa0397130:intron	30.0%
!	TAGGTGATCCAATGTTTTAT+TGG	-	chr3_2:16095352-16095371	Msa0397130:intron	30.0%
	TATAGCTGCCAATAAAACAT+TGG	+	chr3_2:16095363-16095382	None:intergenic	30.0%
!	TTTTATTGGCAGCTATACTT+GGG	-	chr3_2:16095366-16095385	Msa0397130:intron	30.0%
	AAGTTCAAACCAATAGAGTT+AGG	+	chr3_2:16095399-16095418	None:intergenic	30.0%
	AAGAAGGGTTAGAAACAATT+TGG	-	chr3_2:16095616-16095635	Msa0397130:intron	30.0%
	CTGCAAAAATCAGTAAAACA+AGG	+	chr3_2:16095814-16095833	None:intergenic	30.0%
!!!	CTTGTTTTACTGATTTTTGC+AGG	-	chr3_2:16095812-16095831	Msa0397130:CDS	30.0%
!	TTATGATAATGTTTCTCAGC+AGG	+	chr3_2:16096009-16096028	None:intergenic	30.0%
!	TTTAATTTCTGCAATGCCAA+TGG	-	chr3_2:16096057-16096076	Msa0397130:intron	30.0%
!	TGAGCTTTGTATGTTATGTT+TGG	-	chr3_2:16096259-16096278	Msa0397130:intron	30.0%
	AAAGTTCACATGGAAACTTA+GGG	+	chr3_2:16096348-16096367	None:intergenic	30.0%
!	TTTAGGAAGGCAAATCTTTT+AGG	-	chr3_2:16096624-16096643	Msa0397130:intron	30.0%
	TTAGACTACAGACTATTCTA+TGG	+	chr3_2:16097165-16097184	None:intergenic	30.0%
	ACTGTATACCAAACAATCAA+AGG	-	chr3_2:16097214-16097233	Msa0397130:CDS	30.0%
	CTGTATACCAAACAATCAAA+GGG	-	chr3_2:16097215-16097234	Msa0397130:CDS	30.0%
	TGTAAACGATACAGCAACTT+TGG	+	chr3_2:16093106-16093125	None:intergenic	35.0%
!	TCTGGTTTCGAGATTTATCT+TGG	-	chr3_2:16093161-16093180	Msa0397130:three_prime_UTR	35.0%
	CTGGTTTCGAGATTTATCTT+GGG	-	chr3_2:16093162-16093181	Msa0397130:three_prime_UTR	35.0%
!	CTGTCTTTAGTTCCAATCAT+TGG	-	chr3_2:16093210-16093229	Msa0397130:three_prime_UTR	35.0%
!	TCTTTAGTTCCAATCATTGG+TGG	-	chr3_2:16093213-16093232	Msa0397130:three_prime_UTR	35.0%
	CATAAAACCTGAAAAAGGGA+AGG	+	chr3_2:16093580-16093599	None:intergenic	35.0%
!!!	CTTCCCTTTTTCAGGTTTTA+TGG	-	chr3_2:16093578-16093597	Msa0397130:three_prime_UTR	35.0%
!!!	TCCCTTTTTCAGGTTTTATG+GGG	-	chr3_2:16093580-16093599	Msa0397130:three_prime_UTR	35.0%
	CAATATGGTGAAAGGTCAAA+TGG	-	chr3_2:16094055-16094074	Msa0397130:three_prime_UTR	35.0%
	GTCCCAAATCAAAATAAGGA+TGG	+	chr3_2:16094297-16094316	None:intergenic	35.0%
	TTCCACTTCCGTTTATTGTT+TGG	-	chr3_2:16094490-16094509	Msa0397130:three_prime_UTR	35.0%
	AACCAAACAATAAACGGAAG+TGG	+	chr3_2:16094495-16094514	None:intergenic	35.0%
	TCTCCCTTAACATTTAGCAT+TGG	-	chr3_2:16094644-16094663	Msa0397130:intron	35.0%
!	AAGTACCTGAGAGTATAAGA+AGG	+	chr3_2:16094774-16094793	None:intergenic	35.0%
	TGAAAGATCCATTACGAAGA+GGG	-	chr3_2:16095090-16095109	Msa0397130:intron	35.0%
	TCTTTATGAAAAGGGTTTGG+TGG	-	chr3_2:16095279-16095298	Msa0397130:intron	35.0%
!!	GTTTTATTGGCAGCTATACT+TGG	-	chr3_2:16095365-16095384	Msa0397130:intron	35.0%
	TCAAACCAATAGAGTTAGGT+AGG	+	chr3_2:16095395-16095414	None:intergenic	35.0%
	GAAAAGGAATATGTGATGGT+AGG	+	chr3_2:16095427-16095446	None:intergenic	35.0%
	CTTGGAAAAGGAATATGTGA+TGG	+	chr3_2:16095431-16095450	None:intergenic	35.0%
!!	TGTTGACATTGACTTGGAAA+AGG	+	chr3_2:16095443-16095462	None:intergenic	35.0%
!	AACTCATGTTGACATTGACT+TGG	+	chr3_2:16095449-16095468	None:intergenic	35.0%
	AAGTCAATGTCAACATGAGT+TGG	-	chr3_2:16095448-16095467	Msa0397130:intron	35.0%
	TATTAGAAGCCTCAATGTGA+AGG	+	chr3_2:16095536-16095555	None:intergenic	35.0%
	TTCACATTGAGGCTTCTAAT+AGG	-	chr3_2:16095535-16095554	Msa0397130:intron	35.0%
	GCTTCTAATAGGAGATTCAA+TGG	-	chr3_2:16095546-16095565	Msa0397130:intron	35.0%
!!	TACATGGAAACTGCTTTTAC+TGG	+	chr3_2:16095575-16095594	None:intergenic	35.0%
	AGTAAAAGCAGTTTCCATGT+AGG	-	chr3_2:16095574-16095593	Msa0397130:intron	35.0%
!	ATATTTTCCAAGGTCCTACA+TGG	+	chr3_2:16095591-16095610	None:intergenic	35.0%
	CTGTCATTCTCAAACTTACA+AGG	-	chr3_2:16095890-16095909	Msa0397130:intron	35.0%
!!!	CAAGGTTATTTTGGAACATG+TGG	-	chr3_2:16095908-16095927	Msa0397130:intron	35.0%
!	TGCTGGATTTTTGTAAGACT+AGG	-	chr3_2:16095932-16095951	Msa0397130:intron	35.0%
	TTTGTAAGACTAGGATGATC+CGG	-	chr3_2:16095941-16095960	Msa0397130:intron	35.0%
	TATCTACATGCACTAAAAGC+CGG	+	chr3_2:16095963-16095982	None:intergenic	35.0%
	TATTCTCAGCCTCTATAAAC+AGG	+	chr3_2:16096098-16096117	None:intergenic	35.0%
!	GTTTCTTTGTTTGCTGACAT+TGG	-	chr3_2:16096209-16096228	Msa0397130:intron	35.0%
	ATGTTATGTTTGGAAGACAG+AGG	-	chr3_2:16096269-16096288	Msa0397130:intron	35.0%
!	GAAGGCACATACAAATGAAA+GGG	+	chr3_2:16096319-16096338	None:intergenic	35.0%
!	TGAAGGCACATACAAATGAA+AGG	+	chr3_2:16096320-16096339	None:intergenic	35.0%
	CAAAGTTCACATGGAAACTT+AGG	+	chr3_2:16096349-16096368	None:intergenic	35.0%
	TTCACAAGACAAAGTTCACA+TGG	+	chr3_2:16096358-16096377	None:intergenic	35.0%
	TTCTCTTCAGTGTGATTGTT+TGG	-	chr3_2:16096517-16096536	Msa0397130:intron	35.0%
!!!	ATCCAATGTCTTGTTTTCCA+TGG	-	chr3_2:16096652-16096671	Msa0397130:CDS	35.0%
	TTCCATGGAAAACAAGACAT+TGG	+	chr3_2:16096657-16096676	None:intergenic	35.0%
	GTCTGTAGTCTAATGATTAG+AGG	-	chr3_2:16097172-16097191	Msa0397130:CDS	35.0%
	GAAACCAGAACACTAAAAGC+AGG	+	chr3_2:16093150-16093169	None:intergenic	40.0%
	GGAACTAAAGACAGATAGAC+TGG	+	chr3_2:16093204-16093223	None:intergenic	40.0%
	TTTGGCGCAATATAAGTTCG+AGG	-	chr3_2:16093322-16093341	Msa0397130:three_prime_UTR	40.0%
	ACAAGAAACATGTTCGTTGG+TGG	+	chr3_2:16093497-16093516	None:intergenic	40.0%
	CCCCCATAAAACCTGAAAAA+GGG	+	chr3_2:16093584-16093603	None:intergenic	40.0%
!!!	CCCTTTTTCAGGTTTTATGG+GGG	-	chr3_2:16093581-16093600	Msa0397130:three_prime_UTR	40.0%
!!!	CCTTTTTCGAGAAGATGTTG+CGG	+	chr3_2:16093635-16093654	None:intergenic	40.0%
	CGCAACATCTTCTCGAAAAA+GGG	-	chr3_2:16093633-16093652	Msa0397130:three_prime_UTR	40.0%
	GCAACATCTTCTCGAAAAAG+GGG	-	chr3_2:16093634-16093653	Msa0397130:three_prime_UTR	40.0%
	TTCTCGAAAAAGGGGATGAA+GGG	-	chr3_2:16093642-16093661	Msa0397130:three_prime_UTR	40.0%
	ATGAAGGGAAAGTCTGTTAG+TGG	-	chr3_2:16093657-16093676	Msa0397130:three_prime_UTR	40.0%
!	AAAGGGTGTGAGAATTGCAA+GGG	+	chr3_2:16093715-16093734	None:intergenic	40.0%
	AAAACAGCTCTCGCTGAAAT+TGG	-	chr3_2:16093777-16093796	Msa0397130:three_prime_UTR	40.0%
	ATAGATTGAGTAGTCTCGAC+AGG	+	chr3_2:16094108-16094127	None:intergenic	40.0%
	ATATGTAGCTCCAACAAGTC+AGG	-	chr3_2:16094813-16094832	Msa0397130:intron	40.0%
!	ACACCATTAACCTGACTTGT+TGG	+	chr3_2:16094826-16094845	None:intergenic	40.0%
!	GAGGGCACAGTAAAAAATGA+GGG	+	chr3_2:16094989-16095008	None:intergenic	40.0%
!	AGAGGGCACAGTAAAAAATG+AGG	+	chr3_2:16094990-16095009	None:intergenic	40.0%
	CTGAAAGATCCATTACGAAG+AGG	-	chr3_2:16095089-16095108	Msa0397130:intron	40.0%
	AACACATTCCCTCTTCGTAA+TGG	+	chr3_2:16095101-16095120	None:intergenic	40.0%
	ATTACGAAGAGGGAATGTGT+TGG	-	chr3_2:16095100-16095119	Msa0397130:intron	40.0%
	TTACGAAGAGGGAATGTGTT+GGG	-	chr3_2:16095101-16095120	Msa0397130:intron	40.0%
!!	GTTTGTGGTTTGCTCATTAC+AGG	-	chr3_2:16095126-16095145	Msa0397130:intron	40.0%
	ATAGGACTAGAACCTCAAAG+TGG	-	chr3_2:16095162-16095181	Msa0397130:intron	40.0%
	ACCAATGTGCTTTGCTAGAA+GGG	+	chr3_2:16095192-16095211	None:intergenic	40.0%
!	TCTGGAGTAAAAACTGCCAT+AGG	-	chr3_2:16095237-16095256	Msa0397130:intron	40.0%
	GGATTCCTACCTAACTCTAT+TGG	-	chr3_2:16095387-16095406	Msa0397130:intron	40.0%
	AAGGAATATGTGATGGTAGG+TGG	+	chr3_2:16095424-16095443	None:intergenic	40.0%
	ACCTACCAACTGTAGAAATC+TGG	-	chr3_2:16095673-16095692	Msa0397130:CDS	40.0%
	TCCAGATTTCTACAGTTGGT+AGG	+	chr3_2:16095677-16095696	None:intergenic	40.0%
	CAAGTCCAGATTTCTACAGT+TGG	+	chr3_2:16095681-16095700	None:intergenic	40.0%
	GACTTGAACCTAAGTCACAA+CGG	-	chr3_2:16095695-16095714	Msa0397130:CDS	40.0%
	ACTTGAACCTAAGTCACAAC+GGG	-	chr3_2:16095696-16095715	Msa0397130:CDS	40.0%
	TTGCTAACAGGAAATCTTCG+AGG	-	chr3_2:16095849-16095868	Msa0397130:CDS	40.0%
	TGCTAACAGGAAATCTTCGA+GGG	-	chr3_2:16095850-16095869	Msa0397130:CDS	40.0%
!	GTTGCTGTTGCACACACAAT+TGG	-	chr3_2:16093054-16093073	Msa0397130:three_prime_UTR	45.0%
	ACACACAATTGGACATGTCG+CGG	-	chr3_2:16093065-16093084	Msa0397130:three_prime_UTR	45.0%
	AAGACAGATAGACTGGCACA+GGG	+	chr3_2:16093197-16093216	None:intergenic	45.0%
	AAAGACAGATAGACTGGCAC+AGG	+	chr3_2:16093198-16093217	None:intergenic	45.0%
	AGTGCACATCCACCAATGAT+TGG	+	chr3_2:16093225-16093244	None:intergenic	45.0%
	GCGCAATATAAGTTCGAGGT+AGG	-	chr3_2:16093326-16093345	Msa0397130:three_prime_UTR	45.0%
	GCCCCCATAAAACCTGAAAA+AGG	+	chr3_2:16093585-16093604	None:intergenic	45.0%
	GGGGGCTATGATATCAAATC+TGG	-	chr3_2:16093599-16093618	Msa0397130:three_prime_UTR	45.0%
	CCGCAACATCTTCTCGAAAA+AGG	-	chr3_2:16093632-16093651	Msa0397130:three_prime_UTR	45.0%
	CTTCTCGAAAAAGGGGATGA+AGG	-	chr3_2:16093641-16093660	Msa0397130:three_prime_UTR	45.0%
!	CAAAGGGTGTGAGAATTGCA+AGG	+	chr3_2:16093716-16093735	None:intergenic	45.0%
	CCTTCGACAGCAATTGCAAA+GGG	+	chr3_2:16093732-16093751	None:intergenic	45.0%
	TCCTTCGACAGCAATTGCAA+AGG	+	chr3_2:16093733-16093752	None:intergenic	45.0%
	CTCTCGCGTATTCTCTACAT+AGG	+	chr3_2:16094200-16094219	None:intergenic	45.0%
	TCAGGTGTCTTACATGTCGT+TGG	-	chr3_2:16094613-16094632	Msa0397130:intron	45.0%
	GCTCCAACAAGTCAGGTTAA+TGG	-	chr3_2:16094820-16094839	Msa0397130:intron	45.0%
	GTCTTGTGTACGACACTTGT+TGG	-	chr3_2:16094846-16094865	Msa0397130:intron	45.0%
	TACGAAGAGGGAATGTGTTG+GGG	-	chr3_2:16095102-16095121	Msa0397130:intron	45.0%
!!	GTGGTTTGCTCATTACAGGA+AGG	-	chr3_2:16095130-16095149	Msa0397130:intron	45.0%
	TAGAAGGGTTCACCACTTTG+AGG	+	chr3_2:16095177-16095196	None:intergenic	45.0%
	ACCCTTCTAGCAAAGCACAT+TGG	-	chr3_2:16095188-16095207	Msa0397130:intron	45.0%
	CACCAATGTGCTTTGCTAGA+AGG	+	chr3_2:16095193-16095212	None:intergenic	45.0%
	CTTCTAGCAAAGCACATTGG+TGG	-	chr3_2:16095191-16095210	Msa0397130:intron	45.0%
	GGAAAAGATGGAGGCTCTTT+AGG	-	chr3_2:16095333-16095352	Msa0397130:intron	45.0%
	GTCGACAAGGAAACTCAGAA+AGG	+	chr3_2:16095478-16095497	None:intergenic	45.0%
	AAATCATGTGCTCAGGTGTC+TGG	+	chr3_2:16095505-16095524	None:intergenic	45.0%
	AGACACCTGAGCACATGATT+TGG	-	chr3_2:16095504-16095523	Msa0397130:intron	45.0%
	TTGGACCAAATCATGTGCTC+AGG	+	chr3_2:16095512-16095531	None:intergenic	45.0%
	TGGTCCAAACCTTCACATTG+AGG	-	chr3_2:16095524-16095543	Msa0397130:intron	45.0%
	GAAGCCTCAATGTGAAGGTT+TGG	+	chr3_2:16095531-16095550	None:intergenic	45.0%
	GTCCAACCATTTGTGTCAAC+TGG	-	chr3_2:16095729-16095748	Msa0397130:CDS	45.0%
	CTCCAGTTGACACAAATGGT+TGG	+	chr3_2:16095734-16095753	None:intergenic	45.0%
	CCAACTCCAGTTGACACAAA+TGG	+	chr3_2:16095738-16095757	None:intergenic	45.0%
	CCATTTGTGTCAACTGGAGT+TGG	-	chr3_2:16095735-16095754	Msa0397130:CDS	45.0%
!!!	ATTTTGGAACATGTGGCTGC+TGG	-	chr3_2:16095915-16095934	Msa0397130:intron	45.0%
	TCACATGGAAACTTAGGGTC+AGG	+	chr3_2:16096343-16096362	None:intergenic	45.0%
	CACTACTTCAGGTGTGTACA+AGG	+	chr3_2:16096794-16096813	None:intergenic	45.0%
	CTTGTACACACCTGAAGTAG+TGG	-	chr3_2:16096792-16096811	Msa0397130:CDS	45.0%
!!	AAAAATAAATAAATCAAAAA+AGG	+	chr3_2:16097101-16097120	None:intergenic	5.0%
!!!	TTTGATTTATTTATTTTTTA+TGG	-	chr3_2:16097103-16097122	Msa0397130:intron	5.0%
	AATTGGACATGTCGCGGCTA+CGG	-	chr3_2:16093071-16093090	Msa0397130:three_prime_UTR	50.0%
!!	CGAGCCTGCTTTTAGTGTTC+TGG	-	chr3_2:16093143-16093162	Msa0397130:three_prime_UTR	50.0%
	CCCTTTGCAATTGCTGTCGA+AGG	-	chr3_2:16093729-16093748	Msa0397130:three_prime_UTR	50.0%
	TGTCGAAGGACCAGCAATGT+GGG	-	chr3_2:16093743-16093762	Msa0397130:three_prime_UTR	50.0%
	GACAGGACAGGAGTTCAACT+TGG	+	chr3_2:16094091-16094110	None:intergenic	50.0%
	TTGAGTAGTCTCGACAGGAC+AGG	+	chr3_2:16094103-16094122	None:intergenic	50.0%
	GCGCGTCATGGATAATCTCT+TGG	+	chr3_2:16094327-16094346	None:intergenic	50.0%
	AGATTATCCATGACGCGCGA+TGG	-	chr3_2:16094329-16094348	Msa0397130:three_prime_UTR	50.0%
!	AACCCAGGTACTTGATAGCC+AGG	+	chr3_2:16094355-16094374	None:intergenic	50.0%
	TGGTAAATGTGCGCAACAGG+TGG	-	chr3_2:16094555-16094574	Msa0397130:three_prime_UTR	50.0%
	GGTAAATGTGCGCAACAGGT+GGG	-	chr3_2:16094556-16094575	Msa0397130:three_prime_UTR	50.0%
!!	TGACGGGCTGAATTGGTGTA+TGG	+	chr3_2:16094718-16094737	None:intergenic	50.0%
!!	AGAGCATTGACGGGCTGAAT+TGG	+	chr3_2:16094725-16094744	None:intergenic	50.0%
	ATTCAGCCCGTCAATGCTCT+TGG	-	chr3_2:16094725-16094744	Msa0397130:intron	50.0%
	CGGGACCTTCTTATACTCTC+AGG	-	chr3_2:16094766-16094785	Msa0397130:intron	50.0%
!	GGAATGTGTTGGGGTGTTTG+TGG	-	chr3_2:16095111-16095130	Msa0397130:intron	50.0%
	CTAGCAAAGCACATTGGTGG+AGG	-	chr3_2:16095194-16095213	Msa0397130:intron	50.0%
	CAAAGCACATTGGTGGAGGA+AGG	-	chr3_2:16095198-16095217	Msa0397130:intron	50.0%
	GCAGTTTCCATGTAGGACCT+TGG	-	chr3_2:16095581-16095600	Msa0397130:intron	50.0%
	GGAAACTTAGGGTCAGGTGA+AGG	+	chr3_2:16096337-16096356	None:intergenic	50.0%
	ACACACCTGAAGTAGTGGCA+AGG	-	chr3_2:16096797-16096816	Msa0397130:CDS	50.0%
	AGACTCCTTGCCACTACTTC+AGG	+	chr3_2:16096805-16096824	None:intergenic	50.0%
	GAAGTAGTGGCAAGGAGTCT+AGG	-	chr3_2:16096805-16096824	Msa0397130:CDS	50.0%
	CAGATAGACTGGCACAGGGA+AGG	+	chr3_2:16093193-16093212	None:intergenic	55.0%
	CTGTCGAAGGACCAGCAATG+TGG	-	chr3_2:16093742-16093761	Msa0397130:three_prime_UTR	55.0%
	TATCCAGCAGCCCACATTGC+TGG	+	chr3_2:16093756-16093775	None:intergenic	55.0%
	TGGCCTGGCTATCAAGTACC+TGG	-	chr3_2:16094349-16094368	Msa0397130:three_prime_UTR	55.0%
	GGCCTGGCTATCAAGTACCT+GGG	-	chr3_2:16094350-16094369	Msa0397130:three_prime_UTR	55.0%
	GGCTGGTAAATGTGCGCAAC+AGG	-	chr3_2:16094552-16094571	Msa0397130:three_prime_UTR	55.0%
!!	TGCGGCTCCAAGAGCATTGA+CGG	+	chr3_2:16094735-16094754	None:intergenic	55.0%
	GGAGCCGCAATTGCTGTCTT+CGG	-	chr3_2:16094746-16094765	Msa0397130:intron	55.0%
	GAGCCGCAATTGCTGTCTTC+GGG	-	chr3_2:16094747-16094766	Msa0397130:intron	55.0%
	GGTCCCGAAGACAGCAATTG+CGG	+	chr3_2:16094753-16094772	None:intergenic	55.0%
	CTGCTCACCCGTTGTGACTT+AGG	+	chr3_2:16095706-16095725	None:intergenic	55.0%
	AGTCACAACGGGTGAGCAGA+AGG	-	chr3_2:16095707-16095726	Msa0397130:CDS	55.0%
!!	GCGGCTCCAAGAGCATTGAC+GGG	+	chr3_2:16094734-16094753	None:intergenic	60.0%
	GGTGTCTGGTGCAGTCGACA+AGG	+	chr3_2:16095491-16095510	None:intergenic	60.0%
!	GGACCAGCAATGTGGGCTGC+TGG	-	chr3_2:16093750-16093769	Msa0397130:three_prime_UTR	65.0%
	ATCCATGACGCGCGATGGCC+TGG	-	chr3_2:16094334-16094353	Msa0397130:three_prime_UTR	65.0%
	AGCCAGGCCATCGCGCGTCA+TGG	+	chr3_2:16094339-16094358	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_2	gene	16093039	16097410	16093039	ID=Msa0397130;Name=Msa0397130
chr3_2	mRNA	16093039	16097410	16093039	ID=Msa0397130-mRNA-1;Parent=Msa0397130;Name=Msa0397130-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0\|1\|0.75\|1\|1\|1\|4\|1565\|229
chr3_2	exon	16093039	16094615	16093039	ID=Msa0397130-mRNA-1:exon:3690;Parent=Msa0397130-mRNA-1
chr3_2	exon	16095662	16095875	16095662	ID=Msa0397130-mRNA-1:exon:3689;Parent=Msa0397130-mRNA-1
chr3_2	exon	16096635	16096857	16096635	ID=Msa0397130-mRNA-1:exon:3688;Parent=Msa0397130-mRNA-1
chr3_2	exon	16097170	16097410	16097170	ID=Msa0397130-mRNA-1:exon:3687;Parent=Msa0397130-mRNA-1
chr3_2	CDS	16097170	16097410	16097170	ID=Msa0397130-mRNA-1:cds;Parent=Msa0397130-mRNA-1
chr3_2	CDS	16096635	16096857	16096635	ID=Msa0397130-mRNA-1:cds;Parent=Msa0397130-mRNA-1
chr3_2	CDS	16095662	16095875	16095662	ID=Msa0397130-mRNA-1:cds;Parent=Msa0397130-mRNA-1
chr3_2	CDS	16094604	16094615	16094604	ID=Msa0397130-mRNA-1:cds;Parent=Msa0397130-mRNA-1
chr3_2	three_prime_UTR	16093039	16094603	16093039	ID=Msa0397130-mRNA-1:three_prime_utr;Parent=Msa0397130-mRNA-1

Gene Sequence

>Msa0397130

ATGTTTCAACTTCAGGTTGCTGTTGCACACACAATTGGACATGTCGCGGCTACGGTTAGTATGTCCAAAGTTGCTGTATCGTTTACACATATCATCAAGAGTGGCGAGCCTGCTTTTAGTGTTCTGGTTTCGAGATTTATCTTGGGTGAAACCTTCCCTGTGCCAGTCTATCTGTCTTTAGTTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCAAATCTGGCATTTGTGTTCCGCAACATCTTCTCGAAAAAGGGGATGAAGGGAAAGTCTGTTAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTTGCAATTGCTGTCGAAGGACCAGCAATGTGGGCTGCTGGATATAAAACAGCTCTCGCTGAAATTGGACCTCAATTCTTATGGTGGGTAGCTGCTCAGAGTATATTCTATCATCTATACAATCAGGTGTCTTACATGTCGTTGGATGAGATCTCTCCCTTAACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTATCTTCAATTATCATCTTCCATACACCAATTCAGCCCGTCAATGCTCTTGGAGCCGCAATTGCTGTCTTCGGGACCTTCTTATACTCTCAGGCAAAACAATAG

Protein sequence

>Msa0397130

MFQLQVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPAMWAAGYKTALAEIGPQFLWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPIQPVNALGAAIAVFGTFLYSQAKQ*