Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239240 | AES64485.2 | 88.181 | 753 | 85 | 3 | 1 | 750 | 1 | 752 | 0.0 | 1344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239240 | sp|Q9SU29|UPL5_ARATH | 43.472 | 720 | 364 | 15 | 44 | 740 | 139 | 838 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239240 | G7IM34 | 88.181 | 753 | 85 | 3 | 1 | 750 | 1 | 752 | 0.0 | 1344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064970 | Msa0239240 | 0.813645 | 2.305228e-51 | -8.615850e-47 |
| Msa0131770 | Msa0239240 | 0.813273 | 2.782578e-51 | -8.615850e-47 |
| Msa0142220 | Msa0239240 | 0.809289 | 2.036459e-50 | -8.615850e-47 |
| Msa0178930 | Msa0239240 | 0.811676 | 6.214851e-51 | -8.615850e-47 |
| Msa0197380 | Msa0239240 | 0.922002 | 1.731147e-88 | -8.615850e-47 |
| Msa0214300 | Msa0239240 | 0.803504 | 3.378653e-49 | -8.615850e-47 |
| Msa0239240 | Msa0277070 | 0.811348 | 7.321869e-51 | -8.615850e-47 |
| Msa0239240 | Msa0285450 | 0.800635 | 1.313779e-48 | -8.615850e-47 |
| Msa0239240 | Msa0290870 | 0.827284 | 1.702926e-54 | -8.615850e-47 |
| Msa0239240 | Msa0293650 | 0.802227 | 6.199028e-49 | -8.615850e-47 |
| Msa0239240 | Msa0317010 | 0.925466 | 1.765474e-90 | -8.615850e-47 |
| Msa0239240 | Msa0362450 | 0.822849 | 1.901008e-53 | -8.615850e-47 |
| Msa0239240 | Msa0397750 | 0.801056 | 1.078203e-48 | -8.615850e-47 |
| Msa0239240 | Msa0411390 | 0.801173 | 1.020363e-48 | -8.615850e-47 |
| Msa0239240 | Msa0440520 | 0.802146 | 6.441912e-49 | -8.615850e-47 |
| Msa0239240 | Msa0455760 | 0.803985 | 2.683601e-49 | -8.615850e-47 |
| Msa0239240 | Msa0469940 | -0.816450 | 5.496507e-52 | -8.615850e-47 |
| Msa0239240 | Msa0483150 | 0.811228 | 7.775731e-51 | -8.615850e-47 |
| Msa0239240 | Msa0493000 | 0.827967 | 1.167438e-54 | -8.615850e-47 |
| Msa0239240 | Msa0502890 | 0.805875 | 1.080526e-49 | -8.615850e-47 |
| Msa0239240 | Msa0585230 | 0.831378 | 1.727270e-55 | -8.615850e-47 |
| Msa0239240 | Msa0599890 | 0.800178 | 1.627880e-48 | -8.615850e-47 |
| Msa0239240 | Msa0611800 | 0.803496 | 3.391322e-49 | -8.615850e-47 |
| Msa0239240 | Msa0626090 | 0.804066 | 2.582083e-49 | -8.615850e-47 |
| Msa0239240 | Msa0672690 | 0.811886 | 5.595128e-51 | -8.615850e-47 |
| Msa0239240 | Msa0695430 | 0.814223 | 1.719165e-51 | -8.615850e-47 |
| Msa0239240 | Msa0731940 | 0.805408 | 1.354449e-49 | -8.615850e-47 |
| Msa0239240 | Msa0764960 | 0.813641 | 2.309498e-51 | -8.615850e-47 |
| Msa0239240 | Msa0766630 | 0.802058 | 6.717595e-49 | -8.615850e-47 |
| Msa0239240 | Msa0820770 | 0.802535 | 5.356506e-49 | -8.615850e-47 |
| Msa0239240 | Msa0886330 | -0.808638 | 2.807030e-50 | -8.615850e-47 |
| Msa0239240 | Msa0895950 | 0.807830 | 4.172238e-50 | -8.615850e-47 |
| Msa0239240 | Msa0925290 | 0.812801 | 3.531448e-51 | -8.615850e-47 |
| Msa0239240 | Msa0927380 | 0.820984 | 5.138532e-53 | -8.615850e-47 |
| Msa0239240 | Msa0931520 | 0.802792 | 4.742215e-49 | -8.615850e-47 |
| Msa0239240 | Msa0935910 | 0.800010 | 1.760906e-48 | -8.615850e-47 |
| Msa0239240 | Msa0967280 | 0.832126 | 1.129415e-55 | -8.615850e-47 |
| Msa0239240 | Msa0969520 | 0.818991 | 1.468094e-52 | -8.615850e-47 |
| Msa0239240 | Msa0974080 | 0.802584 | 5.233873e-49 | -8.615850e-47 |
| Msa0239240 | Msa0976670 | 0.832555 | 8.840190e-56 | -8.615850e-47 |
| Msa0239240 | Msa1000880 | 0.816457 | 5.476656e-52 | -8.615850e-47 |
| Msa0239240 | Msa1000900 | 0.810905 | 9.136595e-51 | -8.615850e-47 |
| Msa0239240 | Msa1003620 | 0.814238 | 1.705887e-51 | -8.615850e-47 |
| Msa0239240 | Msa1014540 | 0.826507 | 2.612251e-54 | -8.615850e-47 |
| Msa0239240 | Msa1023950 | 0.811805 | 5.826116e-51 | -8.615850e-47 |
| Msa0239240 | Msa1030970 | 0.812282 | 4.585461e-51 | -8.615850e-47 |
| Msa0239240 | Msa1046460 | 0.809749 | 1.622421e-50 | -8.615850e-47 |
| Msa0239240 | Msa1075220 | -0.819963 | 8.812405e-53 | -8.615850e-47 |
| Msa0239240 | Msa1075540 | 0.817804 | 2.726486e-52 | -8.615850e-47 |
| Msa0239240 | Msa1075650 | 0.815638 | 8.344954e-52 | -8.615850e-47 |
| Msa0239240 | Msa1082500 | 0.801287 | 9.667639e-49 | -8.615850e-47 |
| Msa0239240 | Msa1088950 | 0.800439 | 1.440607e-48 | -8.615850e-47 |
| Msa0239240 | Msa1114030 | 0.802284 | 6.034208e-49 | -8.615850e-47 |
| Msa0239240 | Msa1121490 | 0.800736 | 1.252852e-48 | -8.615850e-47 |
| Msa0239240 | Msa1122520 | 0.806353 | 8.571568e-50 | -8.615850e-47 |
| Msa0239240 | Msa1162550 | -0.804583 | 2.014830e-49 | -8.615850e-47 |
| Msa0239240 | Msa1277660 | 0.808068 | 3.712849e-50 | -8.615850e-47 |
| Msa0239240 | Msa1282580 | -0.811840 | 5.723550e-51 | -8.615850e-47 |
| Msa0239240 | Msa1284680 | 0.840721 | 7.333770e-58 | -8.615850e-47 |
| Msa0239240 | Msa1359040 | 0.823335 | 1.464185e-53 | -8.615850e-47 |
| Msa0239240 | Msa1373430 | -0.802366 | 5.805374e-49 | -8.615850e-47 |
| Msa0239240 | Msa1390050 | 0.809431 | 1.898363e-50 | -8.615850e-47 |
| Msa0239240 | Msa1451620 | -0.801354 | 9.367294e-49 | -8.615850e-47 |
| Msa0239240 | Msa1458750 | 0.800845 | 1.190535e-48 | -8.615850e-47 |
| Msa0239240 | Msa1464940 | 0.815468 | 9.105687e-52 | -8.615850e-47 |
| Msa0239240 | Msa1466540 | 0.815242 | 1.022184e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239240 | MtrunA17_Chr2g0289941 | 72.871 | 505 | 120 | 3 | 18 | 505 | 30 | 534 | 0.0 | 744 |
| Msa0239240 | MtrunA17_Chr4g0075761 | 51.421 | 739 | 321 | 11 | 44 | 750 | 124 | 856 | 0.0 | 698 |
| Msa0239240 | MtrunA17_Chr2g0289961 | 90.027 | 371 | 35 | 1 | 126 | 494 | 1 | 371 | 0.0 | 685 |
| Msa0239240 | MtrunA17_Chr2g0289911 | 70.165 | 486 | 130 | 5 | 16 | 494 | 56 | 533 | 0.0 | 647 |
| Msa0239240 | MtrunA17_Chr2g0289891 | 65.049 | 515 | 160 | 4 | 16 | 512 | 61 | 573 | 0.0 | 645 |
| Msa0239240 | MtrunA17_Chr2g0289951 | 87.833 | 263 | 31 | 1 | 489 | 750 | 15 | 277 | 7.52e-162 | 471 |
| Msa0239240 | MtrunA17_Chr2g0289901 | 78.912 | 294 | 30 | 2 | 489 | 750 | 15 | 308 | 5.83e-156 | 457 |
| Msa0239240 | MtrunA17_Chr2g0289881 | 89.109 | 202 | 21 | 1 | 489 | 689 | 18 | 219 | 6.75e-123 | 369 |
| Msa0239240 | MtrunA17_Chr2g0289931 | 85.556 | 180 | 25 | 1 | 511 | 689 | 1 | 180 | 1.63e-102 | 314 |
| Msa0239240 | MtrunA17_Chr5g0427791 | 32.092 | 349 | 215 | 8 | 420 | 755 | 3297 | 3636 | 6.14e-43 | 169 |
| Msa0239240 | MtrunA17_Chr3g0132611 | 32.092 | 349 | 215 | 8 | 420 | 755 | 3303 | 3642 | 7.73e-43 | 169 |
| Msa0239240 | MtrunA17_Chr4g0052551 | 28.534 | 382 | 232 | 9 | 420 | 785 | 3379 | 3735 | 1.59e-37 | 152 |
| Msa0239240 | MtrunA17_Chr4g0052561 | 28.010 | 382 | 234 | 9 | 420 | 785 | 3400 | 3756 | 5.97e-36 | 147 |
| Msa0239240 | MtrunA17_Chr7g0265431 | 25.284 | 352 | 238 | 7 | 417 | 750 | 781 | 1125 | 3.27e-30 | 128 |
| Msa0239240 | MtrunA17_Chr2g0293841 | 26.744 | 344 | 231 | 9 | 420 | 750 | 666 | 1001 | 1.02e-26 | 117 |
| Msa0239240 | MtrunA17_Chr2g0289871 | 77.586 | 58 | 13 | 0 | 693 | 750 | 1 | 58 | 7.61e-23 | 93.2 |
| Msa0239240 | MtrunA17_Chr2g0289921 | 70.690 | 58 | 17 | 0 | 693 | 750 | 1 | 58 | 6.88e-21 | 87.4 |
| Msa0239240 | MtrunA17_Chr1g0181721 | 22.840 | 324 | 202 | 8 | 445 | 725 | 1179 | 1497 | 5.24e-15 | 79.7 |
| Msa0239240 | MtrunA17_Chr4g0037101 | 25.726 | 241 | 157 | 6 | 502 | 725 | 1581 | 1816 | 6.64e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239240 | AT4G12570.1 | 43.472 | 720 | 364 | 15 | 44 | 740 | 139 | 838 | 0.0 | 544 |
| Msa0239240 | AT1G55860.1 | 32.335 | 334 | 204 | 8 | 420 | 740 | 3323 | 3647 | 6.99e-39 | 157 |
| Msa0239240 | AT1G70320.1 | 32.036 | 334 | 205 | 8 | 420 | 740 | 3300 | 3624 | 2.25e-38 | 155 |
| Msa0239240 | AT3G53090.1 | 25.654 | 382 | 244 | 10 | 417 | 778 | 775 | 1136 | 1.11e-29 | 127 |
| Msa0239240 | AT3G53090.2 | 25.654 | 382 | 244 | 10 | 417 | 778 | 775 | 1136 | 1.11e-29 | 127 |
| Msa0239240 | AT3G17205.2 | 27.326 | 344 | 229 | 9 | 420 | 750 | 657 | 992 | 1.84e-26 | 117 |
| Msa0239240 | AT3G17205.1 | 27.326 | 344 | 229 | 9 | 420 | 750 | 671 | 1006 | 1.91e-26 | 116 |
| Msa0239240 | AT3G17205.3 | 27.326 | 344 | 229 | 9 | 420 | 750 | 671 | 1006 | 1.91e-26 | 116 |
| Msa0239240 | AT5G02880.2 | 24.398 | 332 | 204 | 11 | 449 | 740 | 1144 | 1468 | 1.99e-15 | 81.6 |
| Msa0239240 | AT5G02880.1 | 24.398 | 332 | 204 | 11 | 449 | 740 | 1144 | 1468 | 2.14e-15 | 81.3 |
| Msa0239240 | AT4G38600.3 | 25.000 | 260 | 167 | 6 | 488 | 725 | 1571 | 1824 | 3.34e-13 | 74.3 |
| Msa0239240 | AT4G38600.1 | 25.000 | 260 | 167 | 6 | 488 | 725 | 1571 | 1824 | 3.34e-13 | 74.3 |
| Msa0239240 | AT4G38600.2 | 25.000 | 260 | 164 | 7 | 488 | 725 | 1480 | 1730 | 6.16e-12 | 70.1 |
Find 154 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATTGGCCGTGAGAATTT+TGG | 0.208441 | 2_2:+13445331 | None:intergenic |
| TATTGCTGATTCCGTGATTA+AGG | 0.214412 | 2_2:-13444824 | Msa0239240:CDS |
| AGAAGGTTCTTCTGTTCTTT+TGG | 0.215224 | 2_2:-13441226 | Msa0239240:CDS |
| ATTATCAGGTTCACAGGATT+TGG | 0.225978 | 2_2:+13441142 | None:intergenic |
| TATTGACAGGTCTCAGGTTT+TGG | 0.230502 | 2_2:-13443993 | Msa0239240:CDS |
| TCTACAGAGGTAGAGGAATT+AGG | 0.232151 | 2_2:-13442466 | Msa0239240:CDS |
| TTGCAGCTCCTATACATTAT+AGG | 0.243593 | 2_2:+13442547 | None:intergenic |
| ATCATCAGATATCTTGGTTT+TGG | 0.251540 | 2_2:-13442153 | Msa0239240:CDS |
| GCGGACGAAGAATTGTAATT+TGG | 0.270478 | 2_2:+13445238 | None:intergenic |
| ACTGCAGGGTGATCTATTTA+TGG | 0.270574 | 2_2:-13443930 | Msa0239240:CDS |
| CTACTTGTCTGCAGCATCTA+TGG | 0.277385 | 2_2:-13442725 | Msa0239240:intron |
| CGACTTAAAAGATGAAATAT+TGG | 0.278126 | 2_2:-13444029 | Msa0239240:CDS |
| TATAATGAGACCACCCATTA+TGG | 0.278183 | 2_2:+13444260 | None:intergenic |
| TGTTTACCTTGAGGTGTTAT+TGG | 0.292853 | 2_2:-13444755 | Msa0239240:CDS |
| AATAGAATACACCTGCAATT+TGG | 0.296949 | 2_2:-13440987 | Msa0239240:CDS |
| GCTTTCGTTCAACGTTGTTT+TGG | 0.299991 | 2_2:-13444509 | Msa0239240:CDS |
| AAACAAAACTCACCAGTATT+AGG | 0.304280 | 2_2:+13443779 | None:intergenic |
| AAAGAGGATCCCTTGTTTGC+AGG | 0.329535 | 2_2:-13444403 | Msa0239240:CDS |
| CGAAGCATAACCTTTCCTTT+AGG | 0.332753 | 2_2:+13444616 | None:intergenic |
| TATATTGATTCAGATGCATT+AGG | 0.337168 | 2_2:-13442499 | Msa0239240:CDS |
| ATATTACTCTAGAAGATATT+CGG | 0.337527 | 2_2:-13442579 | Msa0239240:CDS |
| TATTAAGTTAGTGGGCAAAA+TGG | 0.340460 | 2_2:-13444353 | Msa0239240:CDS |
| GTTAACAAGAAAAGTGAAAA+AGG | 0.341406 | 2_2:-13444298 | Msa0239240:CDS |
| ATATTGTTTCTTTGATTCTC+AGG | 0.343235 | 2_2:-13444990 | Msa0239240:CDS |
| TAAAGGAAAGGTTATGCTTC+GGG | 0.345031 | 2_2:-13444614 | Msa0239240:CDS |
| GGTAGTCACCTTTGTACATT+TGG | 0.348070 | 2_2:-13440922 | Msa0239240:three_prime_UTR |
| CAAAATTCTCACGGCCAATC+AGG | 0.351222 | 2_2:-13445330 | Msa0239240:CDS |
| GCGGTGCACAAGAACAGTTT+TGG | 0.354328 | 2_2:-13444195 | Msa0239240:CDS |
| ATGACATTTCTGTTGAAGAT+TGG | 0.367109 | 2_2:-13442213 | Msa0239240:CDS |
| ACTAAGGGAGTGGTTTGTTT+TGG | 0.370471 | 2_2:-13443873 | Msa0239240:CDS |
| GCATCTTTGTTGACGCTTGT+TGG | 0.374257 | 2_2:-13444658 | Msa0239240:CDS |
| TAGGAGCTGCAAGCAAATAT+TGG | 0.379389 | 2_2:-13442536 | Msa0239240:CDS |
| TTAAATTCTCTGATCATTTG+AGG | 0.379653 | 2_2:-13444480 | Msa0239240:CDS |
| AGAACGATCATCAGATATCT+TGG | 0.380720 | 2_2:-13442159 | Msa0239240:CDS |
| ATGTAATATGTGCTTAGATA+TGG | 0.382917 | 2_2:+13442336 | None:intergenic |
| AAACGATTCAAATCTTCAAT+TGG | 0.385533 | 2_2:-13445064 | Msa0239240:CDS |
| TATTATTAGAAAGACTTGTT+TGG | 0.392831 | 2_2:+13440802 | None:intergenic |
| GATGAGGGCAAATGATTATC+AGG | 0.400029 | 2_2:+13441128 | None:intergenic |
| GATGAGGACGTTATCCATAA+TGG | 0.401142 | 2_2:-13444274 | Msa0239240:CDS |
| CTAAGGTACTTCATCTTCTC+TGG | 0.401953 | 2_2:-13442688 | Msa0239240:CDS |
| GACTTAAAAGATGAAATATT+GGG | 0.405171 | 2_2:-13444028 | Msa0239240:CDS |
| AGATCACCCTGCAGTGATCT+AGG | 0.411629 | 2_2:+13443938 | None:intergenic |
| GAACACATCAGCTGCAGTTT+CGG | 0.417894 | 2_2:-13441025 | Msa0239240:CDS |
| GCATCCAATCAAAATCTTCA+TGG | 0.421617 | 2_2:+13442251 | None:intergenic |
| GTGAAACATTTACCAGTTGA+AGG | 0.421692 | 2_2:-13441197 | Msa0239240:CDS |
| ACCACTTCTAACCAAATTGC+AGG | 0.425495 | 2_2:+13440976 | None:intergenic |
| CTAAAGGAAAGGTTATGCTT+CGG | 0.430707 | 2_2:-13444615 | Msa0239240:CDS |
| TATGAACTGTCCCACGGGTA+AGG | 0.435311 | 2_2:-13444533 | Msa0239240:CDS |
| GATTCAAATCTTCAATTGGT+TGG | 0.437206 | 2_2:-13445060 | Msa0239240:CDS |
| CTACAGGACCGGGTGTACTA+AGG | 0.442040 | 2_2:-13443889 | Msa0239240:CDS |
| TATTATATTTATTAAGTTAG+TGG | 0.447728 | 2_2:-13444362 | Msa0239240:CDS |
| ATTATATTTATTAAGTTAGT+GGG | 0.450433 | 2_2:-13444361 | Msa0239240:CDS |
| TGCTACCTCATATGATTGTT+CGG | 0.453657 | 2_2:-13444147 | Msa0239240:CDS |
| TGCATTAGCTTTGAAGAAGA+AGG | 0.456195 | 2_2:-13442656 | Msa0239240:CDS |
| ATGAGGACGTTATCCATAAT+GGG | 0.456444 | 2_2:-13444273 | Msa0239240:CDS |
| TATTACTCTAGAAGATATTC+GGG | 0.458771 | 2_2:-13442578 | Msa0239240:CDS |
| TGTGAATTGCTTAGAAGGAC+AGG | 0.459051 | 2_2:-13444727 | Msa0239240:CDS |
| CTTATATTAGTATCTGTCTC+AGG | 0.459308 | 2_2:+13440861 | None:intergenic |
| TGAAGTCATGGAGGATTGCT+TGG | 0.463756 | 2_2:-13444320 | Msa0239240:CDS |
| TGGTAAATGCTCTGCACCTA+AGG | 0.468588 | 2_2:-13442705 | Msa0239240:CDS |
| ATGCAGATCCTATAATGTAT+AGG | 0.471379 | 2_2:-13442555 | Msa0239240:CDS |
| CATCATCACCAAATGCCTCC+TGG | 0.472195 | 2_2:+13444060 | None:intergenic |
| TTGTGCACCGCTGTAGAACT+TGG | 0.473367 | 2_2:+13444207 | None:intergenic |
| ATGAACTGTCCCACGGGTAA+GGG | 0.474804 | 2_2:-13444532 | Msa0239240:CDS |
| TTGTTGTGGATAGTAAGAAC+AGG | 0.477045 | 2_2:-13442402 | Msa0239240:CDS |
| CATTTCTGTTGAAGATTGGA+AGG | 0.477240 | 2_2:-13442209 | Msa0239240:CDS |
| TATAATATCAGCAAAACCTT+GGG | 0.478264 | 2_2:+13442309 | None:intergenic |
| GATGCTTATTGACAGGTCTC+AGG | 0.478608 | 2_2:-13443999 | Msa0239240:CDS |
| CAGGCTTTGTAGAGGTGAAT+CGG | 0.478727 | 2_2:-13444971 | Msa0239240:CDS |
| CAGAGAAGATGAAGTACCTT+AGG | 0.478865 | 2_2:+13442689 | None:intergenic |
| CTCGTCTTCGAAGATGAAAA+AGG | 0.479413 | 2_2:-13445279 | Msa0239240:CDS |
| GCTAGCTTTCATAATCCTAA+AGG | 0.480034 | 2_2:-13444631 | Msa0239240:CDS |
| AGCTATGCCTAGATCACTGC+AGG | 0.483671 | 2_2:-13443945 | Msa0239240:CDS |
| AGCAATCCTCCATGACTTCA+AGG | 0.483811 | 2_2:+13444323 | None:intergenic |
| AGATGTGAAATAATACCTTC+AGG | 0.485483 | 2_2:+13444230 | None:intergenic |
| ATGATAGCCATAGAAGAATA+CGG | 0.494700 | 2_2:+13441076 | None:intergenic |
| TGTAGAGGTGAATCGGTGAT+TGG | 0.496939 | 2_2:-13444964 | Msa0239240:CDS |
| GATATGAGATGCTTATTGAC+AGG | 0.498174 | 2_2:-13444006 | Msa0239240:CDS |
| CAAATGATTATCAGGTTCAC+AGG | 0.500925 | 2_2:+13441136 | None:intergenic |
| ATCAACTACTCCTGCAAACA+AGG | 0.510737 | 2_2:+13444393 | None:intergenic |
| GAATTGATTGAGCTCTGCCC+TGG | 0.512619 | 2_2:-13442436 | Msa0239240:CDS |
| TCACCTTTGTACATTTGGAT+AGG | 0.513751 | 2_2:-13440917 | Msa0239240:three_prime_UTR |
| TTCAAGAATGAGAAAGCTAC+AGG | 0.519306 | 2_2:-13443905 | Msa0239240:CDS |
| AAGCCATGGAAACCTTCAAC+TGG | 0.519382 | 2_2:+13441185 | None:intergenic |
| TTGATTGCACATAGAAATAC+CGG | 0.519586 | 2_2:-13440943 | Msa0239240:three_prime_UTR |
| GAAAATTTGCTTAGATTCGA+AGG | 0.520232 | 2_2:-13444794 | Msa0239240:CDS |
| TGATAGCCATAGAAGAATAC+GGG | 0.522042 | 2_2:+13441077 | None:intergenic |
| ATATAATATCAGCAAAACCT+TGG | 0.523844 | 2_2:+13442308 | None:intergenic |
| TTCAATTGGTTGGACGCTTG+AGG | 0.529589 | 2_2:-13445050 | Msa0239240:CDS |
| TTTCACAAAATCCTTAATCA+CGG | 0.529590 | 2_2:+13444813 | None:intergenic |
| TTGTGCTATTTGTTACAAAG+AGG | 0.531039 | 2_2:-13444419 | Msa0239240:CDS |
| ACCTGCAATTTGGTTAGAAG+TGG | 0.531399 | 2_2:-13440977 | Msa0239240:exon |
| TTACCAGTTGAAGGTTTCCA+TGG | 0.535996 | 2_2:-13441188 | Msa0239240:CDS |
| TACAATTCTTCGTCCGCATG+TGG | 0.542427 | 2_2:-13445232 | Msa0239240:CDS |
| ACAACAAGGCTTTCTCCACC+AGG | 0.542594 | 2_2:+13442418 | None:intergenic |
| GAATGAGAAAGCTACAGGAC+CGG | 0.545119 | 2_2:-13443900 | Msa0239240:CDS |
| GGATGAGTGCCTTGAAGTCA+TGG | 0.545630 | 2_2:-13444332 | Msa0239240:CDS |
| ACGTACCGAACAATCATATG+AGG | 0.549651 | 2_2:+13444142 | None:intergenic |
| GCTATCATGCAAGATCGCCT+TGG | 0.551704 | 2_2:-13441061 | Msa0239240:CDS |
| TATGGAAATTCCTTCACTGT+TGG | 0.556052 | 2_2:-13444869 | Msa0239240:CDS |
| TTGATTCTCAGGCTTTGTAG+AGG | 0.558202 | 2_2:-13444979 | Msa0239240:CDS |
| CTGCAAGCAAATATTGGAGA+TGG | 0.558929 | 2_2:-13442530 | Msa0239240:CDS |
| TTGATTGAGCTCTGCCCTGG+TGG | 0.564545 | 2_2:-13442433 | Msa0239240:CDS |
| CTTTCATAATCCTAAAGGAA+AGG | 0.566374 | 2_2:-13444626 | Msa0239240:CDS |
| TACAGGACCGGGTGTACTAA+GGG | 0.571966 | 2_2:-13443888 | Msa0239240:CDS |
| ATCGGATGGTGCTTGATGCA+TGG | 0.574654 | 2_2:+13444453 | None:intergenic |
| TGAACTGTCCCACGGGTAAG+GGG | 0.575690 | 2_2:-13444531 | Msa0239240:CDS |
| AAGGCACATACCAAGTATCA+TGG | 0.575893 | 2_2:-13442190 | Msa0239240:CDS |
| AATGTCGGCGGAGCAAAAGA+AGG | 0.576344 | 2_2:-13441243 | Msa0239240:CDS |
| AATGAGAAAGCTACAGGACC+GGG | 0.576399 | 2_2:-13443899 | Msa0239240:CDS |
| ACAAAGATGCAAAACTATCC+CGG | 0.576807 | 2_2:+13444671 | None:intergenic |
| AACCACTCCCTTAGTACACC+CGG | 0.580425 | 2_2:+13443881 | None:intergenic |
| ATTCTCTGATCATTTGAGGA+CGG | 0.580787 | 2_2:-13444476 | Msa0239240:CDS |
| GGATTTGGAAATTAATAGAG+TGG | 0.583185 | 2_2:+13441157 | None:intergenic |
| AAATGTACAAAGGTGACTAC+CGG | 0.584975 | 2_2:+13440924 | None:intergenic |
| TCATTATATTATAATCCTGA+AGG | 0.585887 | 2_2:-13444245 | Msa0239240:CDS |
| AGATCGCAGATGAGTTGTTG+AGG | 0.590098 | 2_2:-13444570 | Msa0239240:CDS |
| TTGAGTATGAACTGTCCCAC+GGG | 0.597135 | 2_2:-13444538 | Msa0239240:CDS |
| TGAAGATAACTGATGATCAT+CGG | 0.600246 | 2_2:-13444120 | Msa0239240:CDS |
| GACCGGGTGTACTAAGGGAG+TGG | 0.600889 | 2_2:-13443883 | Msa0239240:CDS |
| AAAACTCCAATAACACCTCA+AGG | 0.603943 | 2_2:+13444749 | None:intergenic |
| ATAGAGTGGAATTCAAGCCA+TGG | 0.606874 | 2_2:+13441171 | None:intergenic |
| TAAAGAGCTACCAACAGTGA+AGG | 0.606930 | 2_2:+13444859 | None:intergenic |
| GAACGAAAGCCCCTTACCCG+TGG | 0.608353 | 2_2:+13444522 | None:intergenic |
| TGGCATGTCCAAATGACCAC+AGG | 0.609897 | 2_2:-13443811 | Msa0239240:CDS |
| AAAATTCTCACGGCCAATCA+GGG | 0.610610 | 2_2:-13445329 | Msa0239240:CDS |
| GTTGCAGGGTGTTTACCTTG+AGG | 0.613279 | 2_2:-13444764 | Msa0239240:CDS |
| GTGAATTGCTTAGAAGGACA+GGG | 0.613382 | 2_2:-13444726 | Msa0239240:CDS |
| AGGTAGAGGAATTAGGACAC+AGG | 0.613656 | 2_2:-13442459 | Msa0239240:CDS |
| ACCGACCACCAAAATTCTCA+CGG | 0.619816 | 2_2:-13445339 | Msa0239240:CDS |
| GCAGATCGTTGGAAGAATGT+CGG | 0.621032 | 2_2:-13441258 | Msa0239240:intron |
| AACGAAAGCCCCTTACCCGT+GGG | 0.631353 | 2_2:+13444523 | None:intergenic |
| GGTAGAGGAATTAGGACACA+GGG | 0.633632 | 2_2:-13442458 | Msa0239240:CDS |
| AGGTGTTACTGTTCCACATG+CGG | 0.633877 | 2_2:+13445219 | None:intergenic |
| TTTGAGTATGAACTGTCCCA+CGG | 0.634776 | 2_2:-13444539 | Msa0239240:CDS |
| AATCCTATCCAAATGTACAA+AGG | 0.639154 | 2_2:+13440914 | None:intergenic |
| TTTGAAGAAGAAGGTGCACG+TGG | 0.640792 | 2_2:-13442647 | Msa0239240:CDS |
| AAAGGAAAGGTTATGCTTCG+GGG | 0.650365 | 2_2:-13444613 | Msa0239240:CDS |
| CACATCTCCAAGTTCTACAG+CGG | 0.650726 | 2_2:-13444214 | Msa0239240:CDS |
| GTTCTTGAGTGATGATTCCA+AGG | 0.654533 | 2_2:+13441044 | None:intergenic |
| TGGTGGAGAAAGCCTTGTTG+TGG | 0.658729 | 2_2:-13442416 | Msa0239240:CDS |
| GAACAGAGTCTCCACGAATG+CGG | 0.668364 | 2_2:-13445093 | Msa0239240:CDS |
| TCAACTACTCCTGCAAACAA+GGG | 0.680763 | 2_2:+13444394 | None:intergenic |
| TGTTCTTACTATCCACAACA+AGG | 0.692481 | 2_2:+13442404 | None:intergenic |
| GATAGCCATAGAAGAATACG+GGG | 0.703482 | 2_2:+13441078 | None:intergenic |
| AGGACGTTATCCATAATGGG+TGG | 0.705349 | 2_2:-13444270 | Msa0239240:CDS |
| AGATAACTGATGATCATCGG+TGG | 0.706841 | 2_2:-13444117 | Msa0239240:CDS |
| CAACAAGGCTTTCTCCACCA+GGG | 0.706861 | 2_2:+13442419 | None:intergenic |
| TGTTGTGGATAGTAAGAACA+GGG | 0.709105 | 2_2:-13442401 | Msa0239240:CDS |
| GATCGTTGGAAGAATGTCGG+CGG | 0.714409 | 2_2:-13441255 | Msa0239240:CDS |
| TTGAAGAAGAAGGTGCACGT+GGG | 0.718697 | 2_2:-13442646 | Msa0239240:CDS |
| GCTATGCCTAGATCACTGCA+GGG | 0.735867 | 2_2:-13443944 | Msa0239240:CDS |
| TGAGTGCCTTGAAGTCATGG+AGG | 0.788698 | 2_2:-13444329 | Msa0239240:CDS |
| ATAGCCATAGAAGAATACGG+GGG | 0.792007 | 2_2:+13441079 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATATTTATTAAGTTAG+TGG | - | chr2_2:13441771-13441790 | Msa0239240:intron | 10.0% |
| !! | ATTATATTTATTAAGTTAGT+GGG | - | chr2_2:13441772-13441791 | Msa0239240:intron | 10.0% |
| !! | ATCTATTGATAAAAAATATA+CGG | + | chr2_2:13443157-13443176 | None:intergenic | 10.0% |
| !!! | AAATTTATGTTTCTTTTGAA+AGG | + | chr2_2:13442462-13442481 | None:intergenic | 15.0% |
| !! | TTTACAAAATGAAATTTCTT+AGG | - | chr2_2:13442500-13442519 | Msa0239240:CDS | 15.0% |
| !! | CTAAAAATATTGAAAGTTAA+TGG | + | chr2_2:13442682-13442701 | None:intergenic | 15.0% |
| !!! | TTAACTTTCAATATTTTTAG+AGG | - | chr2_2:13442682-13442701 | Msa0239240:CDS | 15.0% |
| !! | GAAAAAATATTGAAAGTTAA+TGG | + | chr2_2:13442712-13442731 | None:intergenic | 15.0% |
| !!! | TATAAATTATATTGACTATG+AGG | - | chr2_2:13443264-13443283 | Msa0239240:intron | 15.0% |
| !!! | ATAAATTATATTGACTATGA+GGG | - | chr2_2:13443265-13443284 | Msa0239240:intron | 15.0% |
| !!! | GTTTTATTTTATAAGATTAG+AGG | + | chr2_2:13444288-13444307 | None:intergenic | 15.0% |
| !! | AATGATATAAAAAAAGTCAT+AGG | + | chr2_2:13444674-13444693 | None:intergenic | 15.0% |
| !!! | ATTTTATCCAAAAAAAAACT+TGG | - | chr2_2:13444853-13444872 | Msa0239240:CDS | 15.0% |
| !! | ACTAATTGTTGATATTCAAT+CGG | + | chr2_2:13440995-13441014 | None:intergenic | 20.0% |
| !! | TATCAACAATTAGTATATGA+AGG | - | chr2_2:13441001-13441020 | Msa0239240:CDS | 20.0% |
| !!! | TTTTTCTGTTTTCATGTTTA+TGG | - | chr2_2:13441246-13441265 | Msa0239240:CDS | 20.0% |
| !! | TCATTATATTATAATCCTGA+AGG | - | chr2_2:13441888-13441907 | Msa0239240:intron | 20.0% |
| !!! | AATATTTCATCTTTTAAGTC+GGG | + | chr2_2:13442105-13442124 | None:intergenic | 20.0% |
| !!! | CAATATTTCATCTTTTAAGT+CGG | + | chr2_2:13442106-13442125 | None:intergenic | 20.0% |
| !! | GACTTAAAAGATGAAATATT+GGG | - | chr2_2:13442105-13442124 | Msa0239240:intron | 20.0% |
| !! | AAAAAAGAAGATTAAGTTTG+TGG | - | chr2_2:13442841-13442860 | Msa0239240:intron | 20.0% |
| !! | TATGTAACAATTGTGAAAAA+TGG | - | chr2_2:13442868-13442887 | Msa0239240:intron | 20.0% |
| !! | TTACACAATTAAGAGTTAAT+AGG | + | chr2_2:13443026-13443045 | None:intergenic | 20.0% |
| !!! | ATATTACTCTAGAAGATATT+CGG | - | chr2_2:13443554-13443573 | Msa0239240:intron | 20.0% |
| !! | AAAATAAATAGTGAAGATGA+AGG | + | chr2_2:13444049-13444068 | None:intergenic | 20.0% |
| !! | ACTAAATTGTAACCAAAAAA+AGG | - | chr2_2:13444136-13444155 | Msa0239240:CDS | 20.0% |
| !!! | TATTATTAGAAAGACTTGTT+TGG | + | chr2_2:13445334-13445353 | None:intergenic | 20.0% |
| !!! | ATTCAACTGTTTTTTCACTA+AGG | + | chr2_2:13440937-13440956 | None:intergenic | 25.0% |
| !! | TTGATATTCAATCGGAATTT+TGG | + | chr2_2:13440987-13441006 | None:intergenic | 25.0% |
| ! | AAACGATTCAAATCTTCAAT+TGG | - | chr2_2:13441069-13441088 | Msa0239240:CDS | 25.0% |
| !! | ATATTGTTTCTTTGATTCTC+AGG | - | chr2_2:13441143-13441162 | Msa0239240:CDS | 25.0% |
| ! | TTTCACAAAATCCTTAATCA+CGG | + | chr2_2:13441323-13441342 | None:intergenic | 25.0% |
| ! | TTAAATTCTCTGATCATTTG+AGG | - | chr2_2:13441653-13441672 | Msa0239240:intron | 25.0% |
| ! | AGCACAATTCAAAAATTCAT+CGG | + | chr2_2:13441701-13441720 | None:intergenic | 25.0% |
| ! | GTTAACAAGAAAAGTGAAAA+AGG | - | chr2_2:13441835-13441854 | Msa0239240:intron | 25.0% |
| !!! | ATATTTCATCTTTTAAGTCG+GGG | + | chr2_2:13442104-13442123 | None:intergenic | 25.0% |
| ! | CGACTTAAAAGATGAAATAT+TGG | - | chr2_2:13442104-13442123 | Msa0239240:intron | 25.0% |
| ! | ACTTGTCATTGAAAAATACT+TGG | + | chr2_2:13442424-13442443 | None:intergenic | 25.0% |
| ! | GATACAGAAATAAACTATTG+AGG | + | chr2_2:13442625-13442644 | None:intergenic | 25.0% |
| !!! | TATTTTTTCTTCCTGAATAG+AGG | - | chr2_2:13442723-13442742 | Msa0239240:intron | 25.0% |
| !!! | ATTTTTTCTTCCTGAATAGA+GGG | - | chr2_2:13442724-13442743 | Msa0239240:intron | 25.0% |
| !! | TATTACTCTAGAAGATATTC+GGG | - | chr2_2:13443555-13443574 | Msa0239240:intron | 25.0% |
| !!! | TATATTGATTCAGATGCATT+AGG | - | chr2_2:13443634-13443653 | Msa0239240:intron | 25.0% |
| ! | ATGTAATATGTGCTTAGATA+TGG | + | chr2_2:13443800-13443819 | None:intergenic | 25.0% |
| ! | TATAATATCAGCAAAACCTT+GGG | + | chr2_2:13443827-13443846 | None:intergenic | 25.0% |
| ! | ATATAATATCAGCAAAACCT+TGG | + | chr2_2:13443828-13443847 | None:intergenic | 25.0% |
| !!! | TTAGTTTGTTCTCCTTTTTT+TGG | + | chr2_2:13444151-13444170 | None:intergenic | 25.0% |
| ! | TATGAACTATTTAAATAGGG+GGG | + | chr2_2:13444181-13444200 | None:intergenic | 25.0% |
| ! | CTATGAACTATTTAAATAGG+GGG | + | chr2_2:13444182-13444201 | None:intergenic | 25.0% |
| ! | CCTATGAACTATTTAAATAG+GGG | + | chr2_2:13444183-13444202 | None:intergenic | 25.0% |
| ! | GCCTATGAACTATTTAAATA+GGG | + | chr2_2:13444184-13444203 | None:intergenic | 25.0% |
| ! | TGCCTATGAACTATTTAAAT+AGG | + | chr2_2:13444185-13444204 | None:intergenic | 25.0% |
| ! | TATTTAAATAGTTCATAGGC+AGG | - | chr2_2:13444184-13444203 | Msa0239240:CDS | 25.0% |
| !! | TTTTATAAGATTAGAGGACA+TGG | + | chr2_2:13444282-13444301 | None:intergenic | 25.0% |
| !! | AGAGAAGTGAATTTTATAAG+AGG | + | chr2_2:13444353-13444372 | None:intergenic | 25.0% |
| ! | TTTCGAATTCATTATAACAC+TGG | + | chr2_2:13444605-13444624 | None:intergenic | 25.0% |
| !!! | GTCTTTGAAATAATTCTTTC+TGG | - | chr2_2:13444758-13444777 | Msa0239240:CDS | 25.0% |
| !! | TGAAATAATTCTTTCTGGAA+TGG | - | chr2_2:13444763-13444782 | Msa0239240:CDS | 25.0% |
| ! | ACTTATCATGTAAATTTGCA+AGG | - | chr2_2:13444796-13444815 | Msa0239240:CDS | 25.0% |
| ! | CATTTCGACAAAAAAAAAGA+AGG | + | chr2_2:13445248-13445267 | None:intergenic | 25.0% |
| GATTCAAATCTTCAATTGGT+TGG | - | chr2_2:13441073-13441092 | Msa0239240:CDS | 30.0% | |
| !!! | TGTGTTGCTTTCAACATTTT+AGG | + | chr2_2:13441121-13441140 | None:intergenic | 30.0% |
| ! | GAAAATTTGCTTAGATTCGA+AGG | - | chr2_2:13441339-13441358 | Msa0239240:intron | 30.0% |
| !! | AGTTTTGTGAATTGCTTAGA+AGG | - | chr2_2:13441401-13441420 | Msa0239240:intron | 30.0% |
| !!! | ATCATCTGTATGTTTTTTGC+CGG | - | chr2_2:13441443-13441462 | Msa0239240:intron | 30.0% |
| CTTTCATAATCCTAAAGGAA+AGG | - | chr2_2:13441507-13441526 | Msa0239240:intron | 30.0% | |
| CAATTCAAAAATTCATCGGA+TGG | + | chr2_2:13441697-13441716 | None:intergenic | 30.0% | |
| !! | TTGTGCTATTTGTTACAAAG+AGG | - | chr2_2:13441714-13441733 | Msa0239240:intron | 30.0% |
| ! | TATTAAGTTAGTGGGCAAAA+TGG | - | chr2_2:13441780-13441799 | Msa0239240:intron | 30.0% |
| AGATGTGAAATAATACCTTC+AGG | + | chr2_2:13441906-13441925 | None:intergenic | 30.0% | |
| TGAAGATAACTGATGATCAT+CGG | - | chr2_2:13442013-13442032 | Msa0239240:intron | 30.0% | |
| TATTAGGAAAAAATCTCCTG+TGG | + | chr2_2:13442341-13442360 | None:intergenic | 30.0% | |
| !!! | AGGAGATTTTTTCCTAATAC+TGG | - | chr2_2:13442342-13442361 | Msa0239240:CDS | 30.0% |
| AAACAAAACTCACCAGTATT+AGG | + | chr2_2:13442357-13442376 | None:intergenic | 30.0% | |
| TGAAAAATACTTGGAAAGCA+TGG | + | chr2_2:13442415-13442434 | None:intergenic | 30.0% | |
| TTGAATAGAACTTCATATCC+CGG | - | chr2_2:13442906-13442925 | Msa0239240:intron | 30.0% | |
| ACTTTAACACTTCTGTCAAA+AGG | + | chr2_2:13442981-13443000 | None:intergenic | 30.0% | |
| TTAAGAGTTAATAGGTGAAC+TGG | + | chr2_2:13443018-13443037 | None:intergenic | 30.0% | |
| AGTACCTAACATTAGCAAAT+GGG | + | chr2_2:13443094-13443113 | None:intergenic | 30.0% | |
| TAGTACCTAACATTAGCAAA+TGG | + | chr2_2:13443095-13443114 | None:intergenic | 30.0% | |
| TTTGCTAATGTTAGGTACTA+TGG | - | chr2_2:13443095-13443114 | Msa0239240:intron | 30.0% | |
| ! | AATTTTCTATAGAGCCTCAA+TGG | + | chr2_2:13443312-13443331 | None:intergenic | 30.0% |
| !!! | TCGTGTATTTTTCAAGCAAT+TGG | - | chr2_2:13443522-13443541 | Msa0239240:intron | 30.0% |
| ATGCAGATCCTATAATGTAT+AGG | - | chr2_2:13443578-13443597 | Msa0239240:intron | 30.0% | |
| !! | TAGACCATGAAGATTTTGAT+TGG | - | chr2_2:13443878-13443897 | Msa0239240:CDS | 30.0% |
| ATGACATTTCTGTTGAAGAT+TGG | - | chr2_2:13443920-13443939 | Msa0239240:CDS | 30.0% | |
| ! | CTTTTTATAGCCATGATACT+TGG | + | chr2_2:13443956-13443975 | None:intergenic | 30.0% |
| ! | ATCATCAGATATCTTGGTTT+TGG | - | chr2_2:13443980-13443999 | Msa0239240:CDS | 30.0% |
| TATGTAGGATACTGATCTTA+TGG | - | chr2_2:13444007-13444026 | Msa0239240:CDS | 30.0% | |
| ATGTAGGATACTGATCTTAT+GGG | - | chr2_2:13444008-13444027 | Msa0239240:CDS | 30.0% | |
| CCAAAAAATGCAAGAAAAGA+GGG | + | chr2_2:13444074-13444093 | None:intergenic | 30.0% | |
| ACCAAAAAATGCAAGAAAAG+AGG | + | chr2_2:13444075-13444094 | None:intergenic | 30.0% | |
| CCCCTATTTAAATAGTTCAT+AGG | - | chr2_2:13444180-13444199 | Msa0239240:CDS | 30.0% | |
| AACAATTCTGTCATGGAAAT+TGG | + | chr2_2:13444310-13444329 | None:intergenic | 30.0% | |
| !!! | AGAGGTTTTATTTTGAAACG+AGG | + | chr2_2:13444335-13444354 | None:intergenic | 30.0% |
| ATCAAAACTTGAACCTAACA+CGG | + | chr2_2:13444454-13444473 | None:intergenic | 30.0% | |
| !!! | GTTTTAACTAGATTCTGCAA+AGG | + | chr2_2:13444583-13444602 | None:intergenic | 30.0% |
| TGTTGAAACTTTCACATTCT+AGG | + | chr2_2:13444630-13444649 | None:intergenic | 30.0% | |
| GGATTTGGAAATTAATAGAG+TGG | + | chr2_2:13444979-13444998 | None:intergenic | 30.0% | |
| ATGATAGCCATAGAAGAATA+CGG | + | chr2_2:13445060-13445079 | None:intergenic | 30.0% | |
| AATAGAATACACCTGCAATT+TGG | - | chr2_2:13445146-13445165 | Msa0239240:intron | 30.0% | |
| TTGATTGCACATAGAAATAC+CGG | - | chr2_2:13445190-13445209 | Msa0239240:intron | 30.0% | |
| AATCCTATCCAAATGTACAA+AGG | + | chr2_2:13445222-13445241 | None:intergenic | 30.0% | |
| CTTATATTAGTATCTGTCTC+AGG | + | chr2_2:13445275-13445294 | None:intergenic | 30.0% | |
| TATGGAAATTCCTTCACTGT+TGG | - | chr2_2:13441264-13441283 | Msa0239240:intron | 35.0% | |
| !! | TATTGCTGATTCCGTGATTA+AGG | - | chr2_2:13441309-13441328 | Msa0239240:intron | 35.0% |
| ! | TGTTTACCTTGAGGTGTTAT+TGG | - | chr2_2:13441378-13441397 | Msa0239240:intron | 35.0% |
| AAAACTCCAATAACACCTCA+AGG | + | chr2_2:13441387-13441406 | None:intergenic | 35.0% | |
| !!! | TCATCTGTATGTTTTTTGCC+GGG | - | chr2_2:13441444-13441463 | Msa0239240:intron | 35.0% |
| ACAAAGATGCAAAACTATCC+CGG | + | chr2_2:13441465-13441484 | None:intergenic | 35.0% | |
| !! | GCTAGCTTTCATAATCCTAA+AGG | - | chr2_2:13441502-13441521 | Msa0239240:intron | 35.0% |
| CTAAAGGAAAGGTTATGCTT+CGG | - | chr2_2:13441518-13441537 | Msa0239240:intron | 35.0% | |
| TAAAGGAAAGGTTATGCTTC+GGG | - | chr2_2:13441519-13441538 | Msa0239240:intron | 35.0% | |
| ! | AGATGAGTTGTTGAGGTTTT+TGG | - | chr2_2:13441570-13441589 | Msa0239240:intron | 35.0% |
| ATTCTCTGATCATTTGAGGA+CGG | - | chr2_2:13441657-13441676 | Msa0239240:intron | 35.0% | |
| GAAAAGTGAAAAAGGTGATG+AGG | - | chr2_2:13441843-13441862 | Msa0239240:intron | 35.0% | |
| ATGAGGACGTTATCCATAAT+GGG | - | chr2_2:13441860-13441879 | Msa0239240:intron | 35.0% | |
| TATAATGAGACCACCCATTA+TGG | + | chr2_2:13441876-13441895 | None:intergenic | 35.0% | |
| TGCTACCTCATATGATTGTT+CGG | - | chr2_2:13441986-13442005 | Msa0239240:intron | 35.0% | |
| !! | TTGTGACTGATTTTGAATCC+AGG | - | chr2_2:13442055-13442074 | Msa0239240:intron | 35.0% |
| GATATGAGATGCTTATTGAC+AGG | - | chr2_2:13442127-13442146 | Msa0239240:intron | 35.0% | |
| TTCAAGAATGAGAAAGCTAC+AGG | - | chr2_2:13442228-13442247 | Msa0239240:CDS | 35.0% | |
| ! | TCCAAACAATGCTCTTTTTG+TGG | - | chr2_2:13442302-13442321 | Msa0239240:CDS | 35.0% |
| AAAAATCTCCTGTGGTCATT+TGG | + | chr2_2:13442333-13442352 | None:intergenic | 35.0% | |
| AAATGTTGACCTAGTGTTCA+AGG | - | chr2_2:13442529-13442548 | Msa0239240:CDS | 35.0% | |
| AATGTTGACCTAGTGTTCAA+GGG | - | chr2_2:13442530-13442549 | Msa0239240:CDS | 35.0% | |
| ATTGTGAAGTCCATGTTCAA+AGG | - | chr2_2:13442557-13442576 | Msa0239240:CDS | 35.0% | |
| ! | TAGTCTTGAACCTTTGAACA+TGG | + | chr2_2:13442570-13442589 | None:intergenic | 35.0% |
| ATCAGTAGCAATGATTCATC+TGG | - | chr2_2:13442642-13442661 | Msa0239240:CDS | 35.0% | |
| TCAGTAGCAATGATTCATCT+GGG | - | chr2_2:13442643-13442662 | Msa0239240:CDS | 35.0% | |
| !! | ATGATTCATCTGGGTTTTAG+AGG | - | chr2_2:13442652-13442671 | Msa0239240:CDS | 35.0% |
| AACAATTGAGAGACTTCCAA+TGG | + | chr2_2:13442762-13442781 | None:intergenic | 35.0% | |
| GGGATATGAAGTTCTATTCA+AGG | + | chr2_2:13442907-13442926 | None:intergenic | 35.0% | |
| TGTTAAAGTTGAACCGTGAT+GGG | - | chr2_2:13442992-13443011 | Msa0239240:intron | 35.0% | |
| ! | AGTTCCCATTTGCTAATGTT+AGG | - | chr2_2:13443087-13443106 | Msa0239240:intron | 35.0% |
| ! | TGCATGTTGGTTACATTAGT+TGG | + | chr2_2:13443349-13443368 | None:intergenic | 35.0% |
| TGTAAAAGTTCGTTGCATGT+TGG | + | chr2_2:13443362-13443381 | None:intergenic | 35.0% | |
| !! | TGCATTAGCTTTGAAGAAGA+AGG | - | chr2_2:13443477-13443496 | Msa0239240:intron | 35.0% |
| !!! | GTATTTTTCAAGCAATTGGC+TGG | - | chr2_2:13443526-13443545 | Msa0239240:intron | 35.0% |
| TTGCAGCTCCTATACATTAT+AGG | + | chr2_2:13443589-13443608 | None:intergenic | 35.0% | |
| TGTTCTTACTATCCACAACA+AGG | + | chr2_2:13443732-13443751 | None:intergenic | 35.0% | |
| TTGTTGTGGATAGTAAGAAC+AGG | - | chr2_2:13443731-13443750 | Msa0239240:intron | 35.0% | |
| TGTTGTGGATAGTAAGAACA+GGG | - | chr2_2:13443732-13443751 | Msa0239240:intron | 35.0% | |
| ! | CACATATTACATTTTGCCCA+AGG | - | chr2_2:13443808-13443827 | Msa0239240:CDS | 35.0% |
| GCATCCAATCAAAATCTTCA+TGG | + | chr2_2:13443885-13443904 | None:intergenic | 35.0% | |
| !!! | ATTTTGATTGGATGCTGCAT+GGG | - | chr2_2:13443890-13443909 | Msa0239240:CDS | 35.0% |
| CATTTCTGTTGAAGATTGGA+AGG | - | chr2_2:13443924-13443943 | Msa0239240:CDS | 35.0% | |
| AGAACGATCATCAGATATCT+TGG | - | chr2_2:13443974-13443993 | Msa0239240:CDS | 35.0% | |
| !!! | TCAGATATCTTGGTTTTGGA+AGG | - | chr2_2:13443984-13444003 | Msa0239240:CDS | 35.0% |
| ! | CCCTCTTTTCTTGCATTTTT+TGG | - | chr2_2:13444071-13444090 | Msa0239240:CDS | 35.0% |
| GATGCAGGAGTAGATTTATT+GGG | - | chr2_2:13444206-13444225 | Msa0239240:CDS | 35.0% | |
| GCAATACATATCTTGCTACA+TGG | - | chr2_2:13444228-13444247 | Msa0239240:CDS | 35.0% | |
| TTGCTACATGGTTATCTCTA+AGG | - | chr2_2:13444240-13444259 | Msa0239240:CDS | 35.0% | |
| TGACTGATGATCAGGAAATA+AGG | + | chr2_2:13444376-13444395 | None:intergenic | 35.0% | |
| TCAAAACTTGAACCTAACAC+GGG | + | chr2_2:13444453-13444472 | None:intergenic | 35.0% | |
| ATAGGAACTTACTATGCAGA+TGG | + | chr2_2:13444656-13444675 | None:intergenic | 35.0% | |
| !!! | CGATCTGCCAAGTTTTTTTT+TGG | + | chr2_2:13444863-13444882 | None:intergenic | 35.0% |
| AAAAAAACTTGGCAGATCGT+TGG | - | chr2_2:13444864-13444883 | Msa0239240:CDS | 35.0% | |
| ! | AGAAGGTTCTTCTGTTCTTT+TGG | - | chr2_2:13444907-13444926 | Msa0239240:CDS | 35.0% |
| GTGAAACATTTACCAGTTGA+AGG | - | chr2_2:13444936-13444955 | Msa0239240:CDS | 35.0% | |
| ATTATCAGGTTCACAGGATT+TGG | + | chr2_2:13444994-13445013 | None:intergenic | 35.0% | |
| CAAATGATTATCAGGTTCAC+AGG | + | chr2_2:13445000-13445019 | None:intergenic | 35.0% | |
| TGTAAAAACGTGTGAGATGA+GGG | + | chr2_2:13445023-13445042 | None:intergenic | 35.0% | |
| TTGTAAAAACGTGTGAGATG+AGG | + | chr2_2:13445024-13445043 | None:intergenic | 35.0% | |
| TGATAGCCATAGAAGAATAC+GGG | + | chr2_2:13445059-13445078 | None:intergenic | 35.0% | |
| AAATGTACAAAGGTGACTAC+CGG | + | chr2_2:13445212-13445231 | None:intergenic | 35.0% | |
| TCACCTTTGTACATTTGGAT+AGG | - | chr2_2:13445216-13445235 | Msa0239240:intron | 35.0% | |
| AAAATTCTCACGGCCAATCA+GGG | - | chr2_2:13440804-13440823 | Msa0239240:three_prime_UTR | 40.0% | |
| !!! | AGGATGTGAGTTTTGAGAAG+TGG | + | chr2_2:13440836-13440855 | None:intergenic | 40.0% |
| !! | CTTTTTCATCTTCGAAGACG+AGG | + | chr2_2:13440856-13440875 | None:intergenic | 40.0% |
| CTCGTCTTCGAAGATGAAAA+AGG | - | chr2_2:13440854-13440873 | Msa0239240:three_prime_UTR | 40.0% | |
| GCGGACGAAGAATTGTAATT+TGG | + | chr2_2:13440898-13440917 | None:intergenic | 40.0% | |
| ! | TTGATTCTCAGGCTTTGTAG+AGG | - | chr2_2:13441154-13441173 | Msa0239240:CDS | 40.0% |
| TAAAGAGCTACCAACAGTGA+AGG | + | chr2_2:13441277-13441296 | None:intergenic | 40.0% | |
| TTCGAAGGACAAAAAGTTGC+AGG | - | chr2_2:13441354-13441373 | Msa0239240:intron | 40.0% | |
| TCGAAGGACAAAAAGTTGCA+GGG | - | chr2_2:13441355-13441374 | Msa0239240:intron | 40.0% | |
| TGTGAATTGCTTAGAAGGAC+AGG | - | chr2_2:13441406-13441425 | Msa0239240:intron | 40.0% | |
| GTGAATTGCTTAGAAGGACA+GGG | - | chr2_2:13441407-13441426 | Msa0239240:intron | 40.0% | |
| CGAAGCATAACCTTTCCTTT+AGG | + | chr2_2:13441520-13441539 | None:intergenic | 40.0% | |
| AAAGGAAAGGTTATGCTTCG+GGG | - | chr2_2:13441520-13441539 | Msa0239240:intron | 40.0% | |
| TTTGAGTATGAACTGTCCCA+CGG | - | chr2_2:13441594-13441613 | Msa0239240:intron | 40.0% | |
| ! | GCTTTCGTTCAACGTTGTTT+TGG | - | chr2_2:13441624-13441643 | Msa0239240:intron | 40.0% |
| TCAACTACTCCTGCAAACAA+GGG | + | chr2_2:13441742-13441761 | None:intergenic | 40.0% | |
| ATCAACTACTCCTGCAAACA+AGG | + | chr2_2:13441743-13441762 | None:intergenic | 40.0% | |
| GATGAGGACGTTATCCATAA+TGG | - | chr2_2:13441859-13441878 | Msa0239240:intron | 40.0% | |
| ACGTACCGAACAATCATATG+AGG | + | chr2_2:13441994-13442013 | None:intergenic | 40.0% | |
| AGATAACTGATGATCATCGG+TGG | - | chr2_2:13442016-13442035 | Msa0239240:intron | 40.0% | |
| !! | TGACTGATTTTGAATCCAGG+AGG | - | chr2_2:13442058-13442077 | Msa0239240:intron | 40.0% |
| !!! | TTTTGAATCCAGGAGGCATT+TGG | - | chr2_2:13442065-13442084 | Msa0239240:intron | 40.0% |
| ! | TATTGACAGGTCTCAGGTTT+TGG | - | chr2_2:13442140-13442159 | Msa0239240:intron | 40.0% |
| ACTGCAGGGTGATCTATTTA+TGG | - | chr2_2:13442203-13442222 | Msa0239240:CDS | 40.0% | |
| !!! | ACTAAGGGAGTGGTTTGTTT+TGG | - | chr2_2:13442260-13442279 | Msa0239240:CDS | 40.0% |
| !! | GCCACAAAAAGAGCATTGTT+TGG | + | chr2_2:13442306-13442325 | None:intergenic | 40.0% |
| TTCTTCCTGAATAGAGGGAA+TGG | - | chr2_2:13442729-13442748 | Msa0239240:intron | 40.0% | |
| TTGAAATACCTAAGACAGCC+GGG | + | chr2_2:13442927-13442946 | None:intergenic | 40.0% | |
| GTTGAAATACCTAAGACAGC+CGG | + | chr2_2:13442928-13442947 | None:intergenic | 40.0% | |
| CTGTCTTAGGTATTTCAACG+AGG | - | chr2_2:13442929-13442948 | Msa0239240:intron | 40.0% | |
| GTGTTAAAGTTGAACCGTGA+TGG | - | chr2_2:13442991-13443010 | Msa0239240:intron | 40.0% | |
| GTTACATCAAGTAGCCATTG+AGG | - | chr2_2:13443295-13443314 | Msa0239240:intron | 40.0% | |
| ! | CAGAGAAGATGAAGTACCTT+AGG | + | chr2_2:13443447-13443466 | None:intergenic | 40.0% |
| ! | CTAAGGTACTTCATCTTCTC+TGG | - | chr2_2:13443445-13443464 | Msa0239240:intron | 40.0% |
| TAGGAGCTGCAAGCAAATAT+TGG | - | chr2_2:13443597-13443616 | Msa0239240:intron | 40.0% | |
| CTGCAAGCAAATATTGGAGA+TGG | - | chr2_2:13443603-13443622 | Msa0239240:intron | 40.0% | |
| ! | AGGACTGACATTTTCTACAG+AGG | - | chr2_2:13443654-13443673 | Msa0239240:intron | 40.0% |
| ! | GACATTTTCTACAGAGGTAG+AGG | - | chr2_2:13443660-13443679 | Msa0239240:intron | 40.0% |
| TCTACAGAGGTAGAGGAATT+AGG | - | chr2_2:13443667-13443686 | Msa0239240:intron | 40.0% | |
| !!! | GATTTTGATTGGATGCTGCA+TGG | - | chr2_2:13443889-13443908 | Msa0239240:CDS | 40.0% |
| AAGGCACATACCAAGTATCA+TGG | - | chr2_2:13443943-13443962 | Msa0239240:CDS | 40.0% | |
| !!! | CTTGGTTTTGGAAGGTATGT+AGG | - | chr2_2:13443992-13444011 | Msa0239240:CDS | 40.0% |
| GGATGCAGGAGTAGATTTAT+TGG | - | chr2_2:13444205-13444224 | Msa0239240:CDS | 40.0% | |
| GGTAATAAAGGAACTGAGGA+AGG | + | chr2_2:13444500-13444519 | None:intergenic | 40.0% | |
| CATCGGTAATAAAGGAACTG+AGG | + | chr2_2:13444504-13444523 | None:intergenic | 40.0% | |
| ! | TGGTACTGCATCGGTAATAA+AGG | + | chr2_2:13444512-13444531 | None:intergenic | 40.0% |
| AGGTAAATACGACTGCACTA+TGG | + | chr2_2:13444532-13444551 | None:intergenic | 40.0% | |
| AGGTAAATACGACTGCACTA+TGG | + | chr2_2:13444532-13444551 | None:intergenic | 40.0% | |
| TTACCAGTTGAAGGTTTCCA+TGG | - | chr2_2:13444945-13444964 | Msa0239240:CDS | 40.0% | |
| ATAGAGTGGAATTCAAGCCA+TGG | + | chr2_2:13444965-13444984 | None:intergenic | 40.0% | |
| GATGAGGGCAAATGATTATC+AGG | + | chr2_2:13445008-13445027 | None:intergenic | 40.0% | |
| ATAGCCATAGAAGAATACGG+GGG | + | chr2_2:13445057-13445076 | None:intergenic | 40.0% | |
| GATAGCCATAGAAGAATACG+GGG | + | chr2_2:13445058-13445077 | None:intergenic | 40.0% | |
| GTTCTTGAGTGATGATTCCA+AGG | + | chr2_2:13445092-13445111 | None:intergenic | 40.0% | |
| ACCTGCAATTTGGTTAGAAG+TGG | - | chr2_2:13445156-13445175 | Msa0239240:intron | 40.0% | |
| ACCACTTCTAACCAAATTGC+AGG | + | chr2_2:13445160-13445179 | None:intergenic | 40.0% | |
| GGTAGTCACCTTTGTACATT+TGG | - | chr2_2:13445211-13445230 | Msa0239240:intron | 40.0% | |
| ACCGACCACCAAAATTCTCA+CGG | - | chr2_2:13440794-13440813 | Msa0239240:three_prime_UTR | 45.0% | |
| ! | ATTGGCCGTGAGAATTTTGG+TGG | + | chr2_2:13440802-13440821 | None:intergenic | 45.0% |
| !! | CTGATTGGCCGTGAGAATTT+TGG | + | chr2_2:13440805-13440824 | None:intergenic | 45.0% |
| CAAAATTCTCACGGCCAATC+AGG | - | chr2_2:13440803-13440822 | Msa0239240:three_prime_UTR | 45.0% | |
| TACAATTCTTCGTCCGCATG+TGG | - | chr2_2:13440901-13440920 | Msa0239240:three_prime_UTR | 45.0% | |
| !! | AGGTGTTACTGTTCCACATG+CGG | + | chr2_2:13440917-13440936 | None:intergenic | 45.0% |
| TTCAATTGGTTGGACGCTTG+AGG | - | chr2_2:13441083-13441102 | Msa0239240:CDS | 45.0% | |
| ! | CAGGCTTTGTAGAGGTGAAT+CGG | - | chr2_2:13441162-13441181 | Msa0239240:CDS | 45.0% |
| TGTAGAGGTGAATCGGTGAT+TGG | - | chr2_2:13441169-13441188 | Msa0239240:CDS | 45.0% | |
| GCATCTTTGTTGACGCTTGT+TGG | - | chr2_2:13441475-13441494 | Msa0239240:intron | 45.0% | |
| AGATCGCAGATGAGTTGTTG+AGG | - | chr2_2:13441563-13441582 | Msa0239240:intron | 45.0% | |
| TTGAGTATGAACTGTCCCAC+GGG | - | chr2_2:13441595-13441614 | Msa0239240:intron | 45.0% | |
| ! | AAAGAGGATCCCTTGTTTGC+AGG | - | chr2_2:13441730-13441749 | Msa0239240:intron | 45.0% |
| AGCAATCCTCCATGACTTCA+AGG | + | chr2_2:13441813-13441832 | None:intergenic | 45.0% | |
| TGAAGTCATGGAGGATTGCT+TGG | - | chr2_2:13441813-13441832 | Msa0239240:intron | 45.0% | |
| ! | AGGACGTTATCCATAATGGG+TGG | - | chr2_2:13441863-13441882 | Msa0239240:intron | 45.0% |
| CACATCTCCAAGTTCTACAG+CGG | - | chr2_2:13441919-13441938 | Msa0239240:intron | 45.0% | |
| ! | CGGTGCACAAGAACAGTTTT+GGG | - | chr2_2:13441939-13441958 | Msa0239240:intron | 45.0% |
| ! | GGTGCACAAGAACAGTTTTG+GGG | - | chr2_2:13441940-13441959 | Msa0239240:intron | 45.0% |
| GATGCTTATTGACAGGTCTC+AGG | - | chr2_2:13442134-13442153 | Msa0239240:intron | 45.0% | |
| GAATGAGAAAGCTACAGGAC+CGG | - | chr2_2:13442233-13442252 | Msa0239240:CDS | 45.0% | |
| AATGAGAAAGCTACAGGACC+GGG | - | chr2_2:13442234-13442253 | Msa0239240:CDS | 45.0% | |
| !!! | GTGGTTTGTTTTGGTGTGTC+AGG | - | chr2_2:13442269-13442288 | Msa0239240:CDS | 45.0% |
| CAATTACGCCCTTGAACACT+AGG | + | chr2_2:13442541-13442560 | None:intergenic | 45.0% | |
| AGGATCCATTCCCTCTATTC+AGG | + | chr2_2:13442737-13442756 | None:intergenic | 45.0% | |
| TTGAGAGACTTCCAATGGAG+AGG | + | chr2_2:13442757-13442776 | None:intergenic | 45.0% | |
| AGATGCTGCAGACAAGTAGA+AGG | + | chr2_2:13443407-13443426 | None:intergenic | 45.0% | |
| CTACTTGTCTGCAGCATCTA+TGG | - | chr2_2:13443408-13443427 | Msa0239240:intron | 45.0% | |
| TGGTAAATGCTCTGCACCTA+AGG | - | chr2_2:13443428-13443447 | Msa0239240:intron | 45.0% | |
| ! | TTTGAAGAAGAAGGTGCACG+TGG | - | chr2_2:13443486-13443505 | Msa0239240:intron | 45.0% |
| ! | TTGAAGAAGAAGGTGCACGT+GGG | - | chr2_2:13443487-13443506 | Msa0239240:intron | 45.0% |
| AGGTAGAGGAATTAGGACAC+AGG | - | chr2_2:13443674-13443693 | Msa0239240:intron | 45.0% | |
| GGTAGAGGAATTAGGACACA+GGG | - | chr2_2:13443675-13443694 | Msa0239240:intron | 45.0% | |
| ATAGTTCATAGGCAGGATGC+AGG | - | chr2_2:13444191-13444210 | Msa0239240:CDS | 45.0% | |
| TTAGAGGACATGGAACACAG+CGG | + | chr2_2:13444272-13444291 | None:intergenic | 45.0% | |
| CGAGGCAAACAATTCTGTCA+TGG | + | chr2_2:13444317-13444336 | None:intergenic | 45.0% | |
| CTCTAGCATGACTGATGATC+AGG | + | chr2_2:13444384-13444403 | None:intergenic | 45.0% | |
| ACTGCACTATGGTACTGCAT+CGG | + | chr2_2:13444521-13444540 | None:intergenic | 45.0% | |
| ACTGCACTATGGTACTGCAA+AGG | + | chr2_2:13444552-13444571 | None:intergenic | 45.0% | |
| GCAGATCGTTGGAAGAATGT+CGG | - | chr2_2:13444875-13444894 | Msa0239240:CDS | 45.0% | |
| AAGCCATGGAAACCTTCAAC+TGG | + | chr2_2:13444951-13444970 | None:intergenic | 45.0% | |
| CTTTCCCCCGTATTCTTCTA+TGG | - | chr2_2:13445050-13445069 | Msa0239240:CDS | 45.0% | |
| GAACACATCAGCTGCAGTTT+CGG | - | chr2_2:13445108-13445127 | Msa0239240:CDS | 45.0% | |
| !! | GCCGTGAGAATTTTGGTGGT+CGG | + | chr2_2:13440798-13440817 | None:intergenic | 50.0% |
| ! | GAAGTGGCTTTTGCCCTGAT+TGG | + | chr2_2:13440820-13440839 | None:intergenic | 50.0% |
| GAACAGAGTCTCCACGAATG+CGG | - | chr2_2:13441040-13441059 | Msa0239240:CDS | 50.0% | |
| ! | GTTGCAGGGTGTTTACCTTG+AGG | - | chr2_2:13441369-13441388 | Msa0239240:intron | 50.0% |
| TATGAACTGTCCCACGGGTA+AGG | - | chr2_2:13441600-13441619 | Msa0239240:intron | 50.0% | |
| ATGAACTGTCCCACGGGTAA+GGG | - | chr2_2:13441601-13441620 | Msa0239240:intron | 50.0% | |
| ATCGGATGGTGCTTGATGCA+TGG | + | chr2_2:13441683-13441702 | None:intergenic | 50.0% | |
| GGATGAGTGCCTTGAAGTCA+TGG | - | chr2_2:13441801-13441820 | Msa0239240:intron | 50.0% | |
| TGAGTGCCTTGAAGTCATGG+AGG | - | chr2_2:13441804-13441823 | Msa0239240:intron | 50.0% | |
| TTGTGCACCGCTGTAGAACT+TGG | + | chr2_2:13441929-13441948 | None:intergenic | 50.0% | |
| ! | GCGGTGCACAAGAACAGTTT+TGG | - | chr2_2:13441938-13441957 | Msa0239240:intron | 50.0% |
| CATCATCACCAAATGCCTCC+TGG | + | chr2_2:13442076-13442095 | None:intergenic | 50.0% | |
| AGCTATGCCTAGATCACTGC+AGG | - | chr2_2:13442188-13442207 | Msa0239240:CDS | 50.0% | |
| GCTATGCCTAGATCACTGCA+GGG | - | chr2_2:13442189-13442208 | Msa0239240:CDS | 50.0% | |
| AGATCACCCTGCAGTGATCT+AGG | + | chr2_2:13442198-13442217 | None:intergenic | 50.0% | |
| TACAGGACCGGGTGTACTAA+GGG | - | chr2_2:13442245-13442264 | Msa0239240:CDS | 50.0% | |
| AACCACTCCCTTAGTACACC+CGG | + | chr2_2:13442255-13442274 | None:intergenic | 50.0% | |
| TGGCATGTCCAAATGACCAC+AGG | - | chr2_2:13442322-13442341 | Msa0239240:CDS | 50.0% | |
| AGGGAATGGATCCTCTCCAT+TGG | - | chr2_2:13442743-13442762 | Msa0239240:intron | 50.0% | |
| CTTCATATCCCGGCTGTCTT+AGG | - | chr2_2:13442916-13442935 | Msa0239240:intron | 50.0% | |
| ATAGGTGAACTGGCCCATCA+CGG | + | chr2_2:13443008-13443027 | None:intergenic | 50.0% | |
| GAATTGATTGAGCTCTGCCC+TGG | - | chr2_2:13443697-13443716 | Msa0239240:intron | 50.0% | |
| CAACAAGGCTTTCTCCACCA+GGG | + | chr2_2:13443717-13443736 | None:intergenic | 50.0% | |
| ACAACAAGGCTTTCTCCACC+AGG | + | chr2_2:13443718-13443737 | None:intergenic | 50.0% | |
| !! | TGGTGGAGAAAGCCTTGTTG+TGG | - | chr2_2:13443717-13443736 | Msa0239240:intron | 50.0% |
| TAGAGGACATGGAACACAGC+GGG | + | chr2_2:13444271-13444290 | None:intergenic | 50.0% | |
| TTGAACCTAACACGGGCACA+CGG | + | chr2_2:13444446-13444465 | None:intergenic | 50.0% | |
| GATCGTTGGAAGAATGTCGG+CGG | - | chr2_2:13444878-13444897 | Msa0239240:CDS | 50.0% | |
| AATGTCGGCGGAGCAAAAGA+AGG | - | chr2_2:13444890-13444909 | Msa0239240:CDS | 50.0% | |
| GCTATCATGCAAGATCGCCT+TGG | - | chr2_2:13445072-13445091 | Msa0239240:CDS | 50.0% | |
| ! | CGTTTTCGATGCCGCATTCG+TGG | + | chr2_2:13441054-13441073 | None:intergenic | 55.0% |
| TGAACTGTCCCACGGGTAAG+GGG | - | chr2_2:13441602-13441621 | Msa0239240:intron | 55.0% | |
| AACGAAAGCCCCTTACCCGT+GGG | + | chr2_2:13441613-13441632 | None:intergenic | 55.0% | |
| CTACAGGACCGGGTGTACTA+AGG | - | chr2_2:13442244-13442263 | Msa0239240:CDS | 55.0% | |
| TTGATTGAGCTCTGCCCTGG+TGG | - | chr2_2:13443700-13443719 | Msa0239240:intron | 55.0% | |
| AGAGGACATGGAACACAGCG+GGG | + | chr2_2:13444270-13444289 | None:intergenic | 55.0% | |
| GAACGAAAGCCCCTTACCCG+TGG | + | chr2_2:13441614-13441633 | None:intergenic | 60.0% | |
| GACCGGGTGTACTAAGGGAG+TGG | - | chr2_2:13442250-13442269 | Msa0239240:CDS | 60.0% | |
| TCTAGCCGTGTGCCCGTGTT+AGG | - | chr2_2:13444438-13444457 | Msa0239240:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 13440789 | 13445366 | 13440789 | ID=Msa0239240;Name=Msa0239240 |
| chr2_2 | mRNA | 13440789 | 13445366 | 13440789 | ID=Msa0239240-mRNA-1;Parent=Msa0239240;Name=Msa0239240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.66|0.5|1|1|1|4|194|785 |
| chr2_2 | exon | 13440789 | 13441276 | 13440789 | ID=Msa0239240-mRNA-1:exon:5630;Parent=Msa0239240-mRNA-1 |
| chr2_2 | exon | 13442150 | 13442733 | 13442150 | ID=Msa0239240-mRNA-1:exon:5629;Parent=Msa0239240-mRNA-1 |
| chr2_2 | exon | 13443792 | 13445132 | 13443792 | ID=Msa0239240-mRNA-1:exon:5628;Parent=Msa0239240-mRNA-1 |
| chr2_2 | exon | 13445228 | 13445366 | 13445228 | ID=Msa0239240-mRNA-1:exon:5627;Parent=Msa0239240-mRNA-1 |
| chr2_2 | CDS | 13445228 | 13445366 | 13445228 | ID=Msa0239240-mRNA-1:cds;Parent=Msa0239240-mRNA-1 |
| chr2_2 | CDS | 13443792 | 13445132 | 13443792 | ID=Msa0239240-mRNA-1:cds;Parent=Msa0239240-mRNA-1 |
| chr2_2 | CDS | 13442150 | 13442733 | 13442150 | ID=Msa0239240-mRNA-1:cds;Parent=Msa0239240-mRNA-1 |
| chr2_2 | CDS | 13440983 | 13441276 | 13440983 | ID=Msa0239240-mRNA-1:cds;Parent=Msa0239240-mRNA-1 |
| chr2_2 | three_prime_UTR | 13440789 | 13440982 | 13440789 | ID=Msa0239240-mRNA-1:three_prime_utr;Parent=Msa0239240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
